View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5514_low_4 (Length: 421)

Name: NF5514_low_4
Description: NF5514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5514_low_4
NF5514_low_4
[»] chr8 (28 HSPs)
chr8 (150-412)||(38296424-38296687)
chr8 (18-151)||(7147057-7147190)
chr8 (18-151)||(40058303-40058436)
chr8 (18-151)||(40918731-40918864)
chr8 (18-151)||(30999524-30999657)
chr8 (18-151)||(43275399-43275532)
chr8 (18-151)||(2539930-2540063)
chr8 (18-151)||(11174223-11174356)
chr8 (18-151)||(11646325-11646458)
chr8 (18-151)||(36068224-36068357)
chr8 (18-151)||(37345715-37345848)
chr8 (18-151)||(3585595-3585728)
chr8 (18-151)||(27035139-27035272)
chr8 (15-136)||(20546308-20546429)
chr8 (16-133)||(27563885-27564002)
chr8 (18-151)||(35866757-35866890)
chr8 (18-154)||(28568062-28568198)
chr8 (18-154)||(28575655-28575791)
chr8 (18-145)||(26628822-26628949)
chr8 (18-151)||(28562565-28562698)
chr8 (19-151)||(45400770-45400902)
chr8 (13-115)||(13880991-13881093)
chr8 (38-122)||(10180897-10180981)
chr8 (23-134)||(30906706-30906817)
chr8 (16-146)||(39151544-39151667)
chr8 (61-123)||(37510457-37510519)
chr8 (89-151)||(41305762-41305824)
chr8 (18-75)||(28326734-28326791)
[»] scaffold0368 (1 HSPs)
scaffold0368 (151-412)||(1787-2049)
[»] chr4 (35 HSPs)
chr4 (15-151)||(21310562-21310698)
chr4 (15-153)||(40122485-40122623)
chr4 (15-151)||(25704792-25704928)
chr4 (18-151)||(12071704-12071837)
chr4 (18-151)||(14261188-14261321)
chr4 (18-151)||(22321268-22321401)
chr4 (18-151)||(24706247-24706380)
chr4 (18-151)||(44568981-44569114)
chr4 (18-149)||(21661537-21661668)
chr4 (18-149)||(21670301-21670432)
chr4 (15-141)||(50768003-50768129)
chr4 (18-151)||(20249014-20249147)
chr4 (15-150)||(21064902-21065037)
chr4 (18-154)||(19692866-19693002)
chr4 (18-154)||(19703451-19703587)
chr4 (26-135)||(31892384-31892493)
chr4 (18-141)||(18507276-18507399)
chr4 (18-144)||(6128956-6129082)
chr4 (57-151)||(50839031-50839125)
chr4 (22-151)||(32543627-32543756)
chr4 (18-106)||(34324627-34324716)
chr4 (20-122)||(48652370-48652472)
chr4 (15-93)||(38617857-38617935)
chr4 (18-90)||(1146177-1146249)
chr4 (58-149)||(20714322-20714413)
chr4 (116-151)||(39295418-39295453)
chr4 (26-92)||(30939197-30939263)
chr4 (42-112)||(51777772-51777841)
chr4 (41-74)||(17038377-17038410)
chr4 (15-92)||(56576228-56576305)
chr4 (16-92)||(1615179-1615255)
chr4 (56-124)||(8735399-8735467)
chr4 (38-74)||(20714426-20714462)
chr4 (56-92)||(26906555-26906591)
chr4 (115-151)||(34324618-34324654)
[»] chr2 (23 HSPs)
chr2 (15-151)||(22388138-22388274)
chr2 (15-161)||(1102642-1102788)
chr2 (18-151)||(23366933-23367066)
chr2 (18-151)||(3519051-3519184)
chr2 (18-151)||(39938314-39938447)
chr2 (15-151)||(37673743-37673879)
chr2 (18-151)||(1646431-1646564)
chr2 (18-151)||(12969740-12969873)
chr2 (38-151)||(40756911-40757024)
chr2 (16-152)||(39561894-39562025)
chr2 (26-151)||(28110095-28110220)
chr2 (16-145)||(37284525-37284652)
chr2 (42-148)||(36447426-36447532)
chr2 (18-114)||(19976472-19976568)
chr2 (15-90)||(28401396-28401471)
chr2 (18-121)||(34242118-34242221)
chr2 (21-144)||(4917908-4918031)
chr2 (20-122)||(14779922-14780023)
chr2 (58-116)||(32838964-32839022)
chr2 (18-96)||(1002786-1002864)
chr2 (26-92)||(43077331-43077397)
chr2 (113-153)||(1102501-1102541)
chr2 (38-78)||(32323706-32323746)
[»] chr5 (28 HSPs)
chr5 (18-151)||(40886610-40886743)
chr5 (18-154)||(36561096-36561232)
chr5 (18-151)||(12806853-12806986)
chr5 (18-151)||(30720492-30720625)
chr5 (20-151)||(25773795-25773926)
chr5 (18-151)||(10285058-10285190)
chr5 (18-151)||(25683229-25683362)
chr5 (15-151)||(23097724-23097860)
chr5 (19-151)||(37900623-37900755)
chr5 (15-149)||(16983398-16983532)
chr5 (15-151)||(734339-734475)
chr5 (16-144)||(11319698-11319826)
chr5 (18-145)||(39071026-39071153)
chr5 (16-151)||(1056625-1056758)
chr5 (18-140)||(16054255-16054377)
chr5 (41-153)||(26168075-26168187)
chr5 (38-132)||(30402981-30403075)
chr5 (42-120)||(11795314-11795392)
chr5 (22-88)||(7277486-7277552)
chr5 (22-96)||(11797694-11797768)
chr5 (235-371)||(24018795-24018932)
chr5 (37-78)||(12305687-12305728)
chr5 (16-95)||(21638911-21638990)
chr5 (89-151)||(15304822-15304884)
chr5 (18-92)||(25785928-25786002)
chr5 (113-154)||(15305227-15305268)
chr5 (43-152)||(1055772-1055885)
chr5 (58-114)||(15629320-15629376)
[»] chr3 (39 HSPs)
chr3 (18-151)||(46694110-46694243)
chr3 (18-153)||(13364987-13365122)
chr3 (18-151)||(36881424-36881557)
chr3 (15-151)||(29375273-29375409)
chr3 (18-151)||(23087931-23088064)
chr3 (18-151)||(3383220-3383353)
chr3 (18-151)||(19241668-19241801)
chr3 (18-153)||(198999-199134)
chr3 (15-151)||(13703353-13703489)
chr3 (18-136)||(43750280-43750398)
chr3 (18-151)||(18355868-18356001)
chr3 (18-151)||(32834989-32835122)
chr3 (42-151)||(48820508-48820617)
chr3 (18-128)||(31873886-31873995)
chr3 (16-140)||(48436366-48436490)
chr3 (18-145)||(48963263-48963390)
chr3 (15-140)||(54086693-54086818)
chr3 (38-145)||(6901725-6901831)
chr3 (18-96)||(52009105-52009183)
chr3 (66-151)||(26783661-26783746)
chr3 (23-141)||(27706999-27707116)
chr3 (18-142)||(24064367-24064488)
chr3 (20-114)||(53559648-53559742)
chr3 (45-116)||(1455186-1455257)
chr3 (18-110)||(37293555-37293644)
chr3 (20-90)||(37781082-37781152)
chr3 (23-96)||(52805082-52805155)
chr3 (16-75)||(40228280-40228339)
chr3 (89-151)||(19912153-19912215)
chr3 (89-151)||(38806320-38806382)
chr3 (15-92)||(43159890-43159967)
chr3 (18-75)||(46188910-46188967)
chr3 (89-151)||(12095402-12095464)
chr3 (18-92)||(23771326-23771400)
chr3 (18-92)||(32980679-32980753)
chr3 (89-151)||(44276775-44276837)
chr3 (15-92)||(52173786-52173863)
chr3 (119-151)||(37293437-37293469)
chr3 (46-94)||(51584442-51584490)
[»] chr1 (33 HSPs)
chr1 (18-151)||(40783657-40783790)
chr1 (15-151)||(321767-321903)
chr1 (18-151)||(23045279-23045412)
chr1 (18-151)||(284477-284610)
chr1 (18-151)||(47037852-47037985)
chr1 (20-151)||(23526385-23526516)
chr1 (18-145)||(27210961-27211088)
chr1 (22-156)||(24771901-24772035)
chr1 (22-151)||(33082892-33083021)
chr1 (18-146)||(46771782-46771910)
chr1 (20-144)||(40562293-40562416)
chr1 (18-116)||(40261320-40261418)
chr1 (18-151)||(51064754-51064887)
chr1 (18-151)||(31003787-31003920)
chr1 (18-153)||(18396838-18396973)
chr1 (18-154)||(27143011-27143145)
chr1 (16-114)||(40052501-40052599)
chr1 (18-152)||(34458723-34458857)
chr1 (19-144)||(23166858-23166983)
chr1 (20-146)||(14925610-14925734)
chr1 (27-144)||(24876714-24876831)
chr1 (20-144)||(31061463-31061590)
chr1 (24-144)||(25929248-25929368)
chr1 (18-151)||(1837827-1837961)
chr1 (57-115)||(1749457-1749515)
chr1 (18-82)||(3657218-3657282)
chr1 (60-115)||(14350510-14350565)
chr1 (89-154)||(3943742-3943807)
chr1 (89-151)||(41959788-41959850)
chr1 (20-78)||(49756684-49756742)
chr1 (113-151)||(51064995-51065033)
chr1 (94-151)||(9589615-9589672)
chr1 (19-79)||(52478110-52478170)
[»] chr7 (22 HSPs)
chr7 (18-155)||(10981652-10981789)
chr7 (18-151)||(27813955-27814088)
chr7 (18-151)||(36453124-36453257)
chr7 (18-151)||(25614353-25614486)
chr7 (18-151)||(47110594-47110727)
chr7 (18-151)||(40349106-40349238)
chr7 (16-122)||(27941013-27941119)
chr7 (22-151)||(16662241-16662370)
chr7 (22-151)||(17636601-17636730)
chr7 (16-116)||(3091655-3091755)
chr7 (18-116)||(24456800-24456898)
chr7 (15-93)||(8380079-8380157)
chr7 (46-151)||(16360549-16360653)
chr7 (18-93)||(3498813-3498888)
chr7 (15-122)||(35112438-35112545)
chr7 (36-78)||(6737252-6737294)
chr7 (18-116)||(7743433-7743531)
chr7 (62-140)||(28200488-28200566)
chr7 (18-92)||(46563253-46563327)
chr7 (16-92)||(24283621-24283697)
chr7 (89-145)||(25059456-25059512)
chr7 (38-78)||(41480639-41480679)
[»] chr6 (22 HSPs)
chr6 (18-151)||(8626626-8626759)
chr6 (18-151)||(13757351-13757484)
chr6 (18-151)||(1605722-1605855)
chr6 (18-151)||(4129571-4129703)
chr6 (18-155)||(7761444-7761581)
chr6 (18-151)||(15064695-15064828)
chr6 (18-151)||(29260336-29260469)
chr6 (15-151)||(17942584-17942720)
chr6 (18-152)||(31559737-31559871)
chr6 (18-144)||(8235769-8235895)
chr6 (18-151)||(30734483-30734616)
chr6 (18-151)||(20398238-20398371)
chr6 (22-151)||(3798247-3798376)
chr6 (18-141)||(26860908-26861031)
chr6 (43-151)||(1814762-1814870)
chr6 (27-96)||(847831-847900)
chr6 (89-151)||(19996322-19996384)
chr6 (59-153)||(24120645-24120739)
chr6 (113-151)||(15064933-15064971)
chr6 (18-92)||(31244877-31244951)
chr6 (45-78)||(879317-879350)
chr6 (15-92)||(22784793-22784870)
[»] scaffold1770 (1 HSPs)
scaffold1770 (18-151)||(306-438)
[»] scaffold0054 (1 HSPs)
scaffold0054 (22-151)||(45601-45730)
[»] scaffold0062 (1 HSPs)
scaffold0062 (18-131)||(287-400)
[»] scaffold0168 (1 HSPs)
scaffold0168 (18-151)||(7812-7945)
[»] scaffold0343 (1 HSPs)
scaffold0343 (15-141)||(6911-7036)
[»] scaffold0056 (1 HSPs)
scaffold0056 (22-141)||(71231-71350)
[»] scaffold0025 (1 HSPs)
scaffold0025 (38-117)||(65199-65278)
[»] scaffold0076 (1 HSPs)
scaffold0076 (16-123)||(15351-15458)
[»] scaffold0939 (1 HSPs)
scaffold0939 (43-117)||(1110-1184)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-92)||(252633-252707)
[»] scaffold0060 (1 HSPs)
scaffold0060 (16-96)||(10884-10964)
[»] scaffold1431 (1 HSPs)
scaffold1431 (18-49)||(1-32)
[»] scaffold0009 (1 HSPs)
scaffold0009 (25-92)||(147263-147330)
[»] scaffold0257 (1 HSPs)
scaffold0257 (89-151)||(23851-23913)
[»] scaffold0036 (1 HSPs)
scaffold0036 (15-92)||(23175-23252)


Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 150 - 412
Target Start/End: Complemental strand, 38296687 - 38296424
Alignment:
Q  150 tactatgttaggagggaatctggaggttggcttggcagttggttttgtgctgggtttttggcttcatgagatgccattgttctgaattgtgaggtgtggg 249  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38296687 tactatgttaggagggaacctggaggttggcttggcagttggttttgtgctgggtttttggcttcatgagatgccattgttctgaattgtgaggtgtggg 38296588  T
Q  250 tatgcggttggtgcattgcacgttcgtatactccggcctcattgttttgggtagttttgaactttggcttttgagaggtgttccgtatatttgcgcaccg 349  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38296587 tatgcggttggtgcattgcacgttcgtatactccggccttattgttttgggtagttttgaactttggcttttgagaggtgttccgtatatttgcgcaccg 38296488  T
Q  350 gattgtattcttttgtt-ttttcgtgagtatttatgcgttttgcatttatttgacgagaataat 412  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  38296487 gattgtattcttttgtttttttcgtgagtatttatgcgttttgcatttatttgatgagaataat 38296424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 7147057 - 7147190
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147057 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 7147156  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  7147157 taaaatggacaagtattatgaaacggagggagta 7147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 40058436 - 40058303
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058436 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40058337  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  40058336 taaaatggacaagtattatgaaacggagggagta 40058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 40918864 - 40918731
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40918864 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40918765  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  40918764 taaaatggacaagtattatgaaacggagggagta 40918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 30999657 - 30999524
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30999657 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtgaaacaaaattattctc 30999558  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  30999557 taaaatggacaagtattatgaaacggagggagta 30999524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 43275532 - 43275399
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275532 tctctctacaataaatatgcaagggtattattgacaagataataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 43275433  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  43275432 taaaatggacaagtattatgaaacggagggagta 43275399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 2540063 - 2539930
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2540063 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 2539964  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||| ||||||    
T  2539963 taaaatggacaagtattatgaaacggaaggagta 2539930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 11174356 - 11174223
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11174356 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 11174257  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||| ||||||||||||||||||||||||||    
T  11174256 taaaatgaacaagtattatgaaacggagggagta 11174223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 11646458 - 11646325
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11646458 tctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 11646359  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  11646358 taaaatggacaagtattatgaaacggagggagta 11646325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 36068224 - 36068357
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36068224 tctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 36068323  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  36068324 taaaatggacaagtattatgaaacggagggagta 36068357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 37345715 - 37345848
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37345715 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaaatgacaagtattgtgaaacaaaattattctc 37345814  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||| ||||||    
T  37345815 taaaatggacaagtattatgaaacggaaggagta 37345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 3585595 - 3585728
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3585595 tctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 3585694  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||| |||||||||||||||||||| ||||||    
T  3585695 taaaatagacaagtattatgaaacggatggagta 3585728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 27035139 - 27035272
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27035139 tctctctacagtaaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 27035238  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     |||||| ||||||||||||||||||||| ||||    
T  27035239 caaaatgaacaagtattatgaaacggaggcagta 27035272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 20546429 - 20546308
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20546429 ttttttctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacctgaaagtgacaagtattgtgaaacaaaattatt 20546330  T
Q  115 ctctaaaatggacaagtattat 136  Q
    ||  ||||||||||||||||||    
T  20546329 cttcaaaatggacaagtattat 20546308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 27564002 - 27563885
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||    
T  27564002 tttctctctacaataaataggtaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtaatatgaaacaaaattgttc 27563903  T
Q  116 tctaaaatggacaagtat 133  Q
    || ||||  |||||||||    
T  27563902 tccaaaagcgacaagtat 27563885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 35866757 - 35866890
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||| ||||| ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  35866757 tctctctacaatagatatgtaagagtattattgataaaccaataattaatgttgaattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 35866856  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     ||||| |||||||||| ||||||||| ||||||    
T  35866857 caaaatagacaagtattgtgaaacggatggagta 35866890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 28568062 - 28568198
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||| |||||||||| | ||||||| |||||| ||  |||||||||||||||||||||||||| |||||||||||||   ||||||||||| ||||||    
T  28568062 tctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctc 28568161  T
Q  118 taaaatggacaagtattatgaaacggagggagtacta 154  Q
     |||||||||||||||| ||||| |||||||||||||    
T  28568162 caaaatggacaagtattgtgaaatggagggagtacta 28568198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 28575655 - 28575791
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||| |||||||||| | ||||||| |||||| ||  |||||||||||||||||||||||||| |||||||||||||   ||||||||||| ||||||    
T  28575655 tctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctc 28575754  T
Q  118 taaaatggacaagtattatgaaacggagggagtacta 154  Q
     |||||||||||||||| ||||| |||||||||||||    
T  28575755 caaaatggacaagtattgtgaaatggagggagtacta 28575791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 26628949 - 26628822
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | |||||||||||||| ||  |||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||    
T  26628949 tctctctacaataaataggtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaaatgacaaataaagtgaaacaaaattattctc 26628850  T
Q  118 taaaatggacaagtattatgaaacggag 145  Q
     ||||   ||| ||||| ||||||||||    
T  26628849 caaaagcaacatgtattgtgaaacggag 26628822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 28562565 - 28562698
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||| | |||||||| | ||| ||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||     
T  28562565 tctctcaaaaataaataggtaagagtaatattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaataattctt 28562664  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     |||||||| ||||||| ||| ||||||||||||    
T  28562665 caaaatggataagtattgtgagacggagggagta 28562698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 45400902 - 45400770
Alignment:
Q  19 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctct 118  Q
    |||||||||||||||| | |||  ||||||||| ||   |||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||||     
T  45400902 ctctctacaataaataagtaagaatattattgataaattaataattaatgttgcattgaaatttaaaagtgacaaataaagtgaaacaaaattattctcc 45400803  T
Q  119 aaaatggacaagtattatgaaacggagggagta 151  Q
    ||||  |||  ||||||||||||||||||||||    
T  45400802 aaaaacgacttgtattatgaaacggagggagta 45400770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 13881093 - 13880991
Alignment:
Q  13 agttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaatta 112  Q
    |||| ||||||||||||||||  | |||  ||||||| ||||  ||||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  13881093 agttctctctctacaataaattagtaagattattattaacaaatcaataattaatattgcattgaaacttgaaagtgacaagtaatttgaaacaaaatta 13880994  T
Q  113 ttc 115  Q
    |||    
T  13880993 ttc 13880991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 10180981 - 10180897
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaa 122  Q
    |||||||||||||||||    |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  10180981 aagggtattattgacaaattcataactaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattgttctccaaaa 10180897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 30906817 - 30906706
Alignment:
Q  23 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaa 122  Q
    |||||| ||||| | |||| ||||||| ||||  ||||||||||| ||||||| ||| || ||||| ||||||| ||| ||| |||||||||||  ||||    
T  30906817 ctacaacaaataagtaaggatattattaacaattcaataattaatattgcattaaaatttaaaagtaacaagtaatgtaaaataaaattattcttcaaaa 30906718  T
Q  123 tggacaagtatt 134  Q
      ||||||||||    
T  30906717 acgacaagtatt 30906706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 39151544 - 39151667
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||| ||||||||||| | ||| |||| |||||||||  |||||||||||||||       ||||||| ||||||||| ||| ||||||||| ||||    
T  39151544 tttctctttacaataaataggtaagagtatcattgacaagctaataattaatgttgc-------cttgaaaatgacaagtaatgtaaaacaaaatcattc 39151636  T
Q  116 tctaaaatggacaagtattatgaaacggagg 146  Q
    |  ||||  || ||||||  |||||||||||    
T  39151637 ttcaaaagtgataagtatcgtgaaacggagg 39151667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 37510457 - 37510519
Alignment:
Q  61 aattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaat 123  Q
    ||||||| || ||||||||||| ||||||| |||||   ||||||||||||||||| ||||||    
T  37510457 aattaattttacattgaaacttaaaagtgataagtaaaatgaaacaaaattattctttaaaat 37510519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 41305824 - 41305762
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| |||||||||| |||||    
T  41305824 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagagagta 41305762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 28326791 - 28326734
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 75  Q
    |||||| |||||||| |||||||  ||||||||||||  ||||||||| |||||||||    
T  28326791 tctctccacaataaacatgcaagattattattgacaaaccaataattagtgttgcatt 28326734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 243; Significance: 1e-134; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 151 - 412
Target Start/End: Complemental strand, 2049 - 1787
Alignment:
Q  151 actatgttaggagggaatctggaggttggcttggcagttggttttgtgctgggtttttggcttcatgagatgccattgttctgaattgtgaggtgtgggt 250  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2049 actatgttaggagggaacctggaggttggcttggcagttggttttgtgctgggtttttggcttcatgagatgccattgttctgaattgtgaggtgtgggt 1950  T
Q  251 atgcggttggtgcattgcacgttcgtatactccggcctcattgttttgggtagttttgaactttggcttttgagaggtgttccgtatatttgcgcaccgg 350  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1949 atgcggttggtgcattgcacgttcgtatactccggccttattgttttgggtagttttgaactttggcttttgagaggtgttccgtatatttgcgcaccgg 1850  T
Q  351 attgtattcttttgtt-ttttcgtgagtatttatgcgttttgcatttatttgacgagaataat 412  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1849 attgtattcttttgtttttttcgtgagtatttatgcgttttgcatttatttgatgagaataat 1787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 21310562 - 21310698
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310562 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 21310661  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  21310662 ctctaaaatggacaagtattatgaaacggagggagta 21310698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 40122623 - 40122485
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40122623 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 40122524  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagtact 153  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  40122523 ctctaaaatggacaagtattatgaaacggagagagtact 40122485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 25704792 - 25704928
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25704792 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcactgaaacttgaaagtgacaagtattgtgaaacaaaattatt 25704891  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  25704892 ctctaaaatggacaagtattatgaaacggagggagta 25704928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 12071704 - 12071837
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12071704 tctctctacaataaatatgcaagggtattattgacaagacaagaattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 12071803  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  12071804 taaaatggacaagtattatgaaacggagggagta 12071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 14261188 - 14261321
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14261188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 14261287  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  14261288 taaaatggacaagtattatgaaacggagggagta 14261321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 22321401 - 22321268
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321401 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 22321302  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||| |||||||||||||||||||||||||||    
T  22321301 taaaatagacaagtattatgaaacggagggagta 22321268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 24706380 - 24706247
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24706380 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 24706281  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  24706280 taaaatggacaagtattatgaaacggagggagta 24706247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 44568981 - 44569114
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  44568981 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacatgaaagggacaagtattgtgaaacaaaattattctc 44569080  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  44569081 taaaatggacaagtattatgaaacggagggagta 44569114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 21661668 - 21661537
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21661668 tctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctc 21661569  T
Q  118 taaaatggacaagtattatgaaacggagggag 149  Q
    ||||||||||||||||||||||||||||||||    
T  21661568 taaaatggacaagtattatgaaacggagggag 21661537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 21670432 - 21670301
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21670432 tctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctc 21670333  T
Q  118 taaaatggacaagtattatgaaacggagggag 149  Q
    ||||||||||||||||||||||||||||||||    
T  21670332 taaaatggacaagtattatgaaacggagggag 21670301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 50768003 - 50768129
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50768003 ttttctctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 50768102  T
Q  115 ctctaaaatggacaagtattatgaaac 141  Q
    |||||||||||||||||||||||||||    
T  50768103 ctctaaaatggacaagtattatgaaac 50768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 20249147 - 20249014
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  20249147 tctctctacaataaatatgtaagggtattattgacaagacaataattaatattgcattgaaacttgaaagagacaggtattgtgaaacaaaattattctc 20249048  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     ||||||||||||||||||||||||||| |||||    
T  20249047 caaaatggacaagtattatgaaacggagtgagta 20249014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 21064902 - 21065037
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  21064902 ttttctctctacaataaatatgtaagagtattattgtcaagacaataattaatgttgcattgaaatttgaaagcgataagtattgtgaaacaaaattatt 21065001  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagt 150  Q
    |||||||||| |||||||||||||||||||||||||    
T  21065002 ctctaaaatgaacaagtattatgaaacggagggagt 21065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 19692866 - 19693002
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19692866 tctctctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctc 19692965  T
Q  118 taaaatggacaagtattatgaaacggagggagtacta 154  Q
    |||||| |||||||||| ||| ||||| |||||||||    
T  19692966 taaaatagacaagtattgtgatacggatggagtacta 19693002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 19703451 - 19703587
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19703451 tctctctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctc 19703550  T
Q  118 taaaatggacaagtattatgaaacggagggagtacta 154  Q
    |||||| |||||||||| ||| ||||| |||||||||    
T  19703551 taaaatagacaagtattgtgatacggatggagtacta 19703587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 31892384 - 31892493
Alignment:
Q  26 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgg 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||| || || |    
T  31892384 caataaatatgcaaggctattattgacaagacaataattaatgttacattaaaacttaaaagtgacaagtattgtaaaacaaaattattctccaagatag 31892483  T
Q  126 acaagtatta 135  Q
    ||||||||||    
T  31892484 acaagtatta 31892493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 18507399 - 18507276
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||| |||||||| | |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||    
T  18507399 tctctctataataaataagtaagaatattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagaaatgtgaaacaaaattatgctc 18507300  T
Q  118 taaaatggacaagtattatgaaac 141  Q
    |||||  |||||||||| ||||||    
T  18507299 taaaagcgacaagtattgtgaaac 18507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 6129082 - 6128956
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||   |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||     
T  6129082 tctctctacaataaatagataagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctt 6128983  T
Q  118 taaaatggacaagtattatgaaacgga 144  Q
     ||||  |||| ||||| |||||||||    
T  6128982 caaaagcgacatgtattgtgaaacgga 6128956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 50839125 - 50839031
Alignment:
Q  57 caataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||    
T  50839125 caataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaaaattattctccaaaagcgacaagtattgtgaaatggagggagta 50839031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 32543627 - 32543756
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    |||||||||||||   |||||||||| ||||||  ||||||||||||| ||||| |||||||||||| |||||||   ||||||||||||||||||||||    
T  32543627 tctacaataaatagataagggtattaatgacaaaccaataattaatgtcgcattaaaacttgaaagtaacaagtaaaatgaaacaaaattattctctaaa 32543726  T
Q  122 atggacaagtattatgaaacggagggagta 151  Q
    |  |||||||||| |||||| || ||||||    
T  32543727 agcgacaagtattgtgaaacagaaggagta 32543756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 34324716 - 34324627
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaact-tgaaagtgacaagtattgtgaaaca 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |||  |||||||||| |||||||    
T  34324716 tctctctacaataaatatgcaagggtattattgacaagaaaatcattaatgttgcattgaaactctaaaatggacaagtattatgaaaca 34324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 48652370 - 48652472
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 119  Q
    |||||||  |||||| | |||||||||||| | ||  ||||||||||||| ||||| |||||| ||||| |||||||  ||||||||||||||||||| |    
T  48652370 tctctacgttaaataggtaagggtattattaataaatcaataattaatgtcgcattaaaactttaaagtaacaagtaaagtgaaacaaaattattctcca 48652469  T
Q  120 aaa 122  Q
    |||    
T  48652470 aaa 48652472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 38617935 - 38617857
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 93  Q
    |||||||||| ||||||||||  |||| || |||||| || |||||| ||||||||||||| ||  |||||||||||||    
T  38617935 ttttctctctgcaataaatatataaggataatattgataaaacaatatttaatgttgcattaaactttgaaagtgacaa 38617857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 1146177 - 1146249
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 90  Q
    |||||||||||||||||  |||||||| ||  | ||| |||| | ||||||||||||||||| ||||||||||    
T  1146177 tctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgcattgaaatttgaaagtga 1146249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 20714413 - 20714322
Alignment:
Q  58 aataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggag 149  Q
    |||||||||||||||||||||| || ||| ||| || || | ||||| ||| |||||||||||||  ||||  |||| ||||||| ||||||    
T  20714413 aataattaatgttgcattgaaatttaaaaatgataaataatatgaaataaatttattctctaaaagtgacagatattgtgaaacgtagggag 20714322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 151
Target Start/End: Original strand, 39295418 - 39295453
Alignment:
Q  116 tctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39295418 tctaaaatggacaagtattatgaaacggaaggagta 39295453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 30939263 - 30939197
Alignment:
Q  26 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||| |||||||| |||||  || |||| | ||||||||||||||||  ||||||||||||    
T  30939263 caataaatatccaagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 30939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 51777772 - 51777841
Alignment:
Q  42 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaatta 112  Q
    |||||||||||||  ||||||||||||||||| |  ||||| |||||||||||||  || |||||||||||    
T  51777772 gtattattgacaaaccaataattaatgttgcact-taacttaaaagtgacaagtaaagtaaaacaaaatta 51777841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 17038410 - 17038377
Alignment:
Q  41 ggtattattgacaagacaataattaatgttgcat 74  Q
    ||||||||||| ||||||||||||||||||||||    
T  17038410 ggtattattgataagacaataattaatgttgcat 17038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 56576228 - 56576305
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    ||||||||| ||||||||||   |||| || |||||  || |||||| ||||||||||||||||  ||||||||||||    
T  56576228 ttttctctccacaataaataactaaggataatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 56576305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 1615179 - 1615255
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||||||||||||  ||| |||| ||  | ||| |||| | ||||||||| ||||||| ||||||||||||    
T  1615179 tttctctctacaataaataatcaatggtaataaaggcaaaacaacatttaatgttgtattgaaatttgaaagtgaca 1615255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 8735467 - 8735399
Alignment:
Q  56 acaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatg 124  Q
    |||||| ||||| ||||||||||  ||||||||||||| ||    ||||||||||| ||||||||||||    
T  8735467 acaatatttaatattgcattgaactttgaaagtgacaattaaatagaaacaaaatttttctctaaaatg 8735399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 20714462 - 20714426
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcat 74  Q
    |||||||||||||||||  ||||||||||||||||||    
T  20714462 aagggtattattgacaaaccaataattaatgttgcat 20714426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 26906555 - 26906591
Alignment:
Q  56 acaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||| |||||||||||||||| |||||||||||||    
T  26906555 acaatatttaatgttgcattgaaccttgaaagtgaca 26906591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 34324654 - 34324618
Alignment:
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||| || ||||||    
T  34324654 ctctaaaatggacaagtattatgaaacagatggagta 34324618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 22388274 - 22388138
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388274 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 22388175  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  22388174 ctctaaaatggacaagtattatgaaacggagggagta 22388138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 1102642 - 1102788
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1102642 ttttctctctacaataaatatgcaagggtgttattgacaagacaataattaatgttgcattgaaacttgaaagtgacgagtattgtgaaacaaaattatt 1102741  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagtactatgttagg 161  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||    
T  1102742 ctctcaaatggacaagtattatgaaacggagggagtattatgttagg 1102788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 23366933 - 23367066
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23366933 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 23367032  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  23367033 taaaatggacaagtattatgaaacggagggagta 23367066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 3519051 - 3519184
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3519051 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttacattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 3519150  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||| ||||    
T  3519151 taaaatggacaagtattatgaaacggaggaagta 3519184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 39938314 - 39938447
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  39938314 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattaaaacttaaaagtgacaagtattgtgaaacaaaattattctc 39938413  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||| ||||||||||||||    
T  39938414 taaaatggacaagtattataaaacggagggagta 39938447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 37673879 - 37673743
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  37673879 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttggaagtgacaagtattttgaaacaaagttatt 37673780  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||| ||||||    
T  37673779 ctctaaaatggacaagtattatgaaacggaaggagta 37673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 1646431 - 1646564
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1646431 tctctctacaataaatatgcaagggtattattgacaagataatacttaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaaattattctc 1646530  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||| ||||||||||||||||||||||    
T  1646531 taaaatggacaggtattatgaaacggagggagta 1646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 12969873 - 12969740
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12969873 tctctctacaataaatatttaagggtattattgagaagacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctc 12969774  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     |||||||||||||||||||||||||||||||||    
T  12969773 caaaatggacaagtattatgaaacggagggagta 12969740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 40757024 - 40756911
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatg 137  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||    
T  40757024 aagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaactaaagtgaaacaaaattattctccaaaatggacaagtattatg 40756925  T
Q  138 aaacggagggagta 151  Q
    ||||||||||||||    
T  40756924 aaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 39562025 - 39561894
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||| || ||||||||||     |||||||||||||||||    
T  39562025 tttctctctacaataaataagtaagggtattattgacaaaccaataattaatgttgcattgaaatttaaaagtgacaa-----gtgaaacaaaattattc 39561931  T
Q  116 tctaaaatggacaagtattatgaaacggagggagtac 152  Q
    || ||||  |||| ||||| |||||||||||||||||    
T  39561930 tccaaaaacgacatgtattgtgaaacggagggagtac 39561894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 28110220 - 28110095
Alignment:
Q  26 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgg 125  Q
    ||||||||||| |||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||| ||||||||||  || ||||| ||||  |    
T  28110220 caataaatatgtaagggtattattgataaaccaataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaagttttttctccaaaaacg 28110121  T
Q  126 acaagtattatgaaacggagggagta 151  Q
    | || |||| ||||||||||| ||||    
T  28110120 ataaatattgtgaaacggaggaagta 28110095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 37284652 - 37284525
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||||||||||||||| | ||| |||||| ||| ||  ||||||| |||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  37284652 tttctctctacaataaataggtaagagtattagtgataaatcaataat-aatgttgcattgaaacttgaaaatgacaagtaaagtgaaacaaaattattc 37284554  T
Q  116 tctaaaatggacaagtattatgaaacggag 145  Q
    || ||||  || ||||||| ||||||||||    
T  37284553 tccaaaagaga-aagtattgtgaaacggag 37284525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 36447426 - 36447532
Alignment:
Q  42 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaac 141  Q
    |||||||||| ||  ||||||||||  ||||||||||| ||||||||||| | ||  ||||||||||||||||||||||||  |||| ||||| ||||||    
T  36447426 gtattattgataaaccaataattaacattgcattgaaatttgaaagtgacgaataaagtgaaacaaaattattctctaaaagcgacatgtattgtgaaac 36447525  T
Q  142 ggaggga 148  Q
    |||||||    
T  36447526 ggaggga 36447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 19976472 - 19976568
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||||||||||   || | ||||||||| ||   |||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  19976472 tctctctacaataaatagataatgatattattgataaactaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 19976568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28401471 - 28401396
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 90  Q
    |||||||| |||||||| || |||||||||||||||||||  ||||||||||||| || |||||||||||||||||    
T  28401471 ttttctctttacaataattaggcaagggtattattgacaaatcaataattaatgtggccttgaaacttgaaagtga 28401396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 34242118 - 34242221
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | |||| ||||||||| ||  ||||| ||||| ||||||| |||||| |||||||| ||||   ||||||||||||||||||    
T  34242118 tctctctacaataaataggtaaggatattattgataaaccaatatttaatattgcattaaaacttaaaagtgaccagtaaaatgaaacaaaattattctc 34242217  T
Q  118 taaa 121  Q
    ||||    
T  34242218 taaa 34242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 4917908 - 4918031
Alignment:
Q  21 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaa 120  Q
    |||||| ||||||| | ||||| | |||||||||| ||||||||||||||| ||| ||| | |||||||||||||| |||||| ||||||| || |  ||    
T  4917908 ctctaccataaataggtaagggaactattgacaagccaataattaatgttgaattaaaattcgaaagtgacaagtaatgtgaagcaaaattgtttttcaa 4918007  T
Q  121 aatggacaagtattatgaaacgga 144  Q
    ||  ||||| |||| |||||||||    
T  4918008 aaatgacaaatattgtgaaacgga 4918031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 14779922 - 14780023
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 119  Q
    |||||||| |||||| ||||||||||| || ||||   |||  ||||| ||||||||||||||||||||||||||||   |||||||||||||||||| |    
T  14779922 tctctacagtaaataggcaagggtatt-ttaacaaacaaatcgttaatcttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctcca 14780020  T
Q  120 aaa 122  Q
    |||    
T  14780021 aaa 14780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 32839022 - 32838964
Alignment:
Q  58 aataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 116  Q
    |||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  32839022 aataattaatattgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 32838964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 1002864 - 1002786
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 96  Q
    |||||||||||||||||   |||| ||| ||| | ||  ||||||||||||||||||||| | |||||| |||||||||    
T  1002864 tctctctacaataaatagataaggatataattaataaaccaataattaatgttgcattgagatttgaaaatgacaagta 1002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 43077397 - 43077331
Alignment:
Q  26 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    ||||||||||  ||||||| |||||  || |||||| ||||||||||||||||  ||||||||||||    
T  43077397 caataaatatctaagggtaatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 43077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 1102541 - 1102501
Alignment:
Q  113 ttctctaaaatggacaagtattatgaaacggagggagtact 153  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  1102541 ttctccaaaatggacatgtattttgaaacggagggagtact 1102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 32323746 - 32323706
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcattgaa 78  Q
    ||||||||| ||||||| ||||||||| |||||||||||||    
T  32323746 aagggtatttttgacaaaacaataattgatgttgcattgaa 32323706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 40886743 - 40886610
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40886743 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40886644  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  40886643 taaaatggacaagtattatgaaacggagggagta 40886610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 36561232 - 36561096
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36561232 tctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 36561133  T
Q  118 taaaatggacaagtattatgaaacggagggagtacta 154  Q
    |||||||||||||||||||||||||||||||||||||    
T  36561132 taaaatggacaagtattatgaaacggagggagtacta 36561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 12806986 - 12806853
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12806986 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagagacaagtattgtgaaacaaaattattctc 12806887  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  12806886 taaaatggacaagtattatgaaacggagggagta 12806853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 30720625 - 30720492
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720625 tctctctacaataaatatgcaagggtattattgacaagacaataactaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 30720526  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  30720525 taaaatggacaagtattatgaaacggagggagta 30720492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 25773795 - 25773926
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25773795 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaacttattctcta 25773894  T
Q  120 aaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||| |||||    
T  25773895 aaatggacaagtattatgaaacggagagagta 25773926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 10285190 - 10285058
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10285190 tctctctacaataaatatgcaagg-tattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 10285092  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||| |||||||||||||||||||||||||||    
T  10285091 taaaatagacaagtattatgaaacggagggagta 10285058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 25683362 - 25683229
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25683362 tctctctacaataaatatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagttttatgaaacaaaattattctc 25683263  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     |||||||||||||||||||||||||||||||||    
T  25683262 caaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 23097860 - 23097724
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  23097860 ttttctctctacaataaatatgtaagggtattattgacaagacaataattaatattgcattgaaacatgaaagtaacaagtattgtgaaacaaaattatt 23097761  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||| |||||||||||||||||||||||||| ||||||    
T  23097760 ctccaaaatggacaagtattatgaaacggaaggagta 23097724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 37900755 - 37900623
Alignment:
Q  19 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctct 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      
T  37900755 ctctctgcaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtatcgtgaaacaaaattattcttc 37900656  T
Q  119 aaaatggacaagtattatgaaacggagggagta 151  Q
    ||||| |||||||||||||||||||| ||||||    
T  37900655 aaaatagacaagtattatgaaacggaaggagta 37900623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 16983398 - 16983532
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16983398 ttttctctctgcaatagatatgcaagggtattattgaaaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattatt 16983497  T
Q  115 ctctaaaatggacaagtattatgaaacggagggag 149  Q
    ||  ||||| |||||||||||| |||| |||||||    
T  16983498 cttcaaaatagacaagtattataaaacagagggag 16983532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 734475 - 734339
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||| |||| ||| | ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  734475 ttttctctctataatatataggtaagagtattattgataaaccaataattaatgttgtattgaaacttgaaagtgacaagtaaagtgaaacaaaattatt 734376  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||| |||||||||||||||| |||||||| |||||||    
T  734375 ctccaaaatggacaagtattgtgaaacggtgggagta 734339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 11319698 - 11319826
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||||||||||||||| | ||| |||||||| | ||  ||||||||||| ||||||| |||| ||||||||| || ||  |||||||||||||||||    
T  11319698 tttctctctacaataaataggtaagagtattattaataaaccaataattaatattgcattaaaacctgaaagtgataaataaagtgaaacaaaattattc 11319797  T
Q  116 tctaaaatggacaagtattatgaaacgga 144  Q
    |||||||| ||||||||||||||||||||    
T  11319798 tctaaaatagacaagtattatgaaacgga 11319826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 39071026 - 39071153
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | ||| | |||||||| ||  ||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||    
T  39071026 tctctctacaataaataggtaagtggattattgataaaccaataattaatgttgcattgatacttaaaagtgacaagtaaagtgaaacaaaattattctc 39071125  T
Q  118 taaaatggacaagtattatgaaacggag 145  Q
     ||||| |||||||||| |||| |||||    
T  39071126 aaaaatagacaagtattgtgaatcggag 39071153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 1056758 - 1056625
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    |||||||||||||||||||   ||| |||||||||||||   |||||||||||||||||||||||||||||||||  |||| | ||||| ||||||||||    
T  1056758 tttctctctacaataaataaataagagtattattgacaaactaataattaatgttgcattgaaacttgaaagtga-tagtaat-tgaaataaaattattc 1056661  T
Q  116 tctaaaatggacaagtattatgaaacggagggagta 151  Q
    || ||||  |||||||||| ||||||||||||||||    
T  1056660 tccaaaagtgacaagtattgtgaaacggagggagta 1056625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 16054255 - 16054377
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||   |||||||||||||||||   ||||||||||||||||||||||||||||||||||||  |  ||||| |||||||||||||    
T  16054255 tctctctacaataaatagataagggtattattgacaaactaataattaatgttgcattgaaacttgaaagtgacaaccaaagtgaaccaaaattattctc 16054354  T
Q  118 taaaatggacaagtattatgaaa 140  Q
     ||||  |||| ||||| |||||    
T  16054355 caaaagcgacatgtattttgaaa 16054377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 26168075 - 26168187
Alignment:
Q  41 ggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaa 140  Q
    ||||||||| ||||   ||| |||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||  |||| ||||  |||||    
T  26168075 ggtattattaacaaacaaatcattaatcttgcattgaaacttgaaagtgacaattaaagtgaaacaaaattattctctaaaaacgacatgtatcgtgaaa 26168174  T
Q  141 cggagggagtact 153  Q
    |||| ||||||||    
T  26168175 cggaaggagtact 26168187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 30403075 - 30402981
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagta 132  Q
    |||||||||||||||||  ||||||||||| ||| |||||||||| |||||||||||||   ||||| |||||||||||||||||  ||||||||    
T  30403075 aagggtattattgacaaaccaataattaattttgtattgaaacttaaaagtgacaagtaaaatgaaataaaattattctctaaaagcgacaagta 30402981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 11795392 - 11795314
Alignment:
Q  42 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaa 120  Q
    |||||||||| ||  | |||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||    
T  11795392 gtattattgataaacctataattaatgttgcattgaaacttgaaagtgataaataaagtgaaacaaaattattctctaa 11795314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 7277552 - 7277486
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagt 88  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||| || |||||    
T  7277552 tctacaataaataagtaagggcattattgacaagacaataattaattttgcattgaaatttaaaagt 7277486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 11797694 - 11797768
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 96  Q
    ||||||||||||| |||||||||| ||||||||   |||||||||||||| ||||||| |||||| |||||||||    
T  11797694 tctacaataaataagcaagggtatcattgacaaactaataattaatgttgtattgaaatttgaaaatgacaagta 11797768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 371
Target Start/End: Original strand, 24018795 - 24018932
Alignment:
Q  235 attgtgaggtgtgggtatgcggttggtgcattgcacgttcgtatactccggcctcattgttttgggtagttttgaa-ctttggcttttgagaggtgttcc 333  Q
    ||||||||| |||||||||||| |||||| | || ||| ||||||||||||| ||||| |||||||| |||||    |||| ||||||||| ||||||||    
T  24018795 attgtgaggcgtgggtatgcggctggtgcttcgcccgtgcgtatactccggcatcattattttgggtggttttttgtctttagcttttgaggggtgttcc 24018894  T
Q  334 gtatatttgcg-caccggattgtattcttttgttttttc 371  Q
    |||||| || | |||| | ||||||||| ||||||||||    
T  24018895 gtatatatgtgacacc-gtttgtattctattgttttttc 24018932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 12305687 - 12305728
Alignment:
Q  37 caagggtattattgacaagacaataattaatgttgcattgaa 78  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  12305687 caagggtattattgacaaaacaataatcaatgttgcattgaa 12305728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 21638911 - 21638990
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 95  Q
    |||||||| |||||| ||| | ||| | |||||||||||  ||||| ||||||||||||| |||||| || |||||||||    
T  21638911 tttctctccacaatatataggtaagagaattattgacaaaccaatatttaatgttgcatttaaacttaaatgtgacaagt 21638990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 15304884 - 15304822
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| | ||||||||||||||    
T  15304884 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttaaaacggagggagta 15304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 25786002 - 25785928
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||||||||||  |||||||| || || ||| |||| | ||||||||| ||||||  ||||||||||||    
T  25786002 tctctctacaataaataatcaagggtaataatgccaaaacaacatttaatgttgtattgaactttgaaagtgaca 25785928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 15305227 - 15305268
Alignment:
Q  113 ttctctaaaatggacaagtattatgaaacggagggagtacta 154  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  15305227 ttctccaaaatggacatgtattttgaaacggagggagtacta 15305268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 1055885 - 1055772
Alignment:
Q  43 tattattgacaagacaataattaatgttgcattgaaacttgaaag----tgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatga 138  Q
    ||||||| ||||  ||||| |||||||||||||||||||||| ||     ||||||||  ||||| |||| |||||||| ||||  ||||| ||||  ||    
T  1055885 tattattaacaaaccaatatttaatgttgcattgaaacttgagagagacagacaagtaaagtgaagcaaatttattctccaaaaacgacaaatattggga 1055786  T
Q  139 aacggagggagtac 152  Q
    |||||| |||||||    
T  1055785 aacggaaggagtac 1055772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 15629320 - 15629376
Alignment:
Q  58 aataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||| |||||||||| || ||| | |||||||  ||||||||||||||||    
T  15629320 aataattaatgctgcattgaaatttaaaaataacaagtaaagtgaaacaaaattatt 15629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 1e-69; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 46694243 - 46694110
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46694243 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 46694144  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  46694143 taaaatggacaagtattatgaaacggagggagta 46694110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 13364987 - 13365122
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13364987 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 13365086  T
Q  118 taaaatggacaagtattatgaaacggagggagtact 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  13365087 taaaatggacaagtattatgaaacggagggagtact 13365122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 36881424 - 36881557
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36881424 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 36881523  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  36881524 taaaatggacaagtattatgaaacggagggagta 36881557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 29375273 - 29375409
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29375273 ttttttctctacaataaatatgcaagggcattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 29375372  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  29375373 ctctaaaatggacaagtattatgaaacggagggagta 29375409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 23088064 - 23087931
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23088064 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 23087965  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||| |||||||||||||||||||||| ||||    
T  23087964 taaaatcgacaagtattatgaaacggaggaagta 23087931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 3383220 - 3383353
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3383220 tctctctacaataaatatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 3383319  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||| ||||| | ||||||    
T  3383320 taaaatggacaagtattataaaacgaaaggagta 3383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 19241801 - 19241668
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  19241801 tctctctacaataaacatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttaaaagtgacaagtattttgaaacaaaattattctc 19241702  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  19241701 taaaatggacaagtattatgaaacggagggagta 19241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 198999 - 199134
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||    
T  198999 tctctctacaataaatatgcaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaaatgacaaatattgtgaaacaaaattattttc 199098  T
Q  118 taaaatggacaagtattatgaaacggagggagtact 153  Q
    |||||||||||| |||||||||| ||||||||||||    
T  199099 taaaatggacaactattatgaaatggagggagtact 199134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 13703353 - 13703489
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  13703353 ttttctctctgcaataaatatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaatttatt 13703452  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||  | |||||||||||||||||||||||| ||||||    
T  13703453 cttcagaatggacaagtattatgaaacggatggagta 13703489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 43750280 - 43750398
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  43750280 tctctcaacaataaatatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgagaaaccaaattattcta 43750379  T
Q  118 taaaatggacaagtattat 136  Q
     ||||||||||||||||||    
T  43750380 aaaaatggacaagtattat 43750398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 18356001 - 18355868
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||     
T  18356001 tctctctacaataaataagtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctt 18355902  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     |||||||||||||||| ||||||||||||||||    
T  18355901 caaaatggacaagtattgtgaaacggagggagta 18355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 32835122 - 32834989
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||| |||||  ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| | |||||| |||||||||||    
T  32835122 tctctctacaattaatatttaagggtattattgacaaaacaatacttaatgttgcattgaaacttgaaaatgacaagtactatgaaacgaaattattctc 32835023  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    || |||||||||||||||||||||||||||||||    
T  32835022 tacaatggacaagtattatgaaacggagggagta 32834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 48820508 - 48820617
Alignment:
Q  42 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaac 141  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  48820508 gtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttttaaaatggacaagtattatgaaac 48820607  T
Q  142 ggagggagta 151  Q
    ||||| ||||    
T  48820608 ggaggaagta 48820617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 31873995 - 31873886
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  31873995 tctctctgcaataaatatataagggtatt-ttgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaataaaattattctc 31873897  T
Q  118 taaaatggaca 128  Q
    |||||||||||    
T  31873896 taaaatggaca 31873886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 48436366 - 48436490
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    |||||||||||||||||||   ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48436366 tttctctctacaataaataattaagtgtattattgacaagctaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattc 48436465  T
Q  116 tctaaaatggacaagtattatgaaa 140  Q
    || ||||  ||||| |||| |||||    
T  48436466 tccaaaagtgacaaatattgtgaaa 48436490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 48963263 - 48963390
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||| ||| || |||| ||||| ||||||||||||    
T  48963263 tctctttacaataaatatataaggatattattgacaagacaataattaatgttgcattgaaacttaaaaatgataaatattatgaaataaaattattctc 48963362  T
Q  118 taaaatggacaagtattatgaaacggag 145  Q
    |||||| || ||||| |||||| |||||    
T  48963363 taaaatagataagtaatatgaatcggag 48963390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 54086693 - 54086818
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||| |||| ||| | |||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||| ||   |||||||||| ||||    
T  54086693 ttttctctctataatacataggtaagggtattattgataaatcaataattaatgttgtattgaaacttgaaagtgacaaataaaatgaaacaaaagtatt 54086792  T
Q  115 ctctaaaatggacaagtattatgaaa 140  Q
    ||| |||||||||||||||| |||||    
T  54086793 ctccaaaatggacaagtattgtgaaa 54086818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 6901725 - 6901831
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatg 137  Q
    |||| ||||||||| ||  |||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||| |||| ||    
T  6901725 aaggatattattgataaatcaatgattaatgttgcattgaaacttaaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaa-tattgtg 6901823  T
Q  138 aaacggag 145  Q
    ||||||||    
T  6901824 aaacggag 6901831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 52009183 - 52009105
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 96  Q
    ||||||||||||||||| | || | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52009183 tctctctacaataaataggtaatgttattattgacaagacaataattaatgttgcatcgaaacttgaaagtgacaagta 52009105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 26783661 - 26783746
Alignment:
Q  66 atgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||| | ||||||||| ||||    
T  26783661 atgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctttaaaatagacaagtattgtaaaacggaggaagta 26783746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 27707116 - 27706999
Alignment:
Q  23 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaa 122  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||| |||| ||| |||||||||| || |||||||||| ||||||||| |  | ||    
T  27707116 ctacaataaatatgta-gggtattattgacaagacaatagttaatgttacattaaaatttgaaagtgataaatattgtgaaataaaattatttttcagaa 27707018  T
Q  123 tggacaagtattatgaaac 141  Q
    |||| || |||||||||||    
T  27707017 tggataaatattatgaaac 27706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 24064367 - 24064488
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | ||   ||||||||| ||  |||||||||||||| |||| |||||||||||||||| |||  |||||| ||||||||||||    
T  24064367 tctctctacaataaataggtaa---tattattgataaaccaataattaatgttacattaaaacttgaaagtgacatgtaaagtgaaataaaattattctc 24064463  T
Q  118 taaaatggacaagtattatgaaacg 142  Q
     ||||  |||| ||||| |||||||    
T  24064464 caaaaacgacatgtattgtgaaacg 24064488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 53559742 - 53559648
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||| | ||  |||||||| | ||  |||| ||||||||||||||||||||||| |||||||||||   |||||||||||||||    
T  53559742 tctctacaataaataagtaacagtattattaataaatcaatgattaatgttgcattgaaacttgagagtgacaagtaaattgaaacaaaattatt 53559648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 1455257 - 1455186
Alignment:
Q  45 ttattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 116  Q
    ||||||||||  ||||||||||||||||||||||| | ||||||||||||||  || ||||||| |||||||    
T  1455257 ttattgacaaaccaataattaatgttgcattgaaattggaaagtgacaagtaaagtaaaacaaatttattct 1455186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 37293555 - 37293644
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaat 110  Q
    ||||||||||||||||| | ||||||| |||||| ||   |  ||||||||||||||||||||||||||| ||||||||   |||||||||||    
T  37293555 tctctctacaataaataggtaagggtaatattgataa---atcaattaatgttgcattgaaacttgaaagggacaagtaaaatgaaacaaaat 37293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 37781082 - 37781152
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 90  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||||  ||| ||||||| ||||||||||    
T  37781082 tctctacaataaatatttaagggtattattgacaaaccaataattaactttggattgaaatttgaaagtga 37781152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 52805155 - 52805082
Alignment:
Q  23 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 96  Q
    ||||||| |||| | |||||| ||||||| ||  ||||||| |||||||||| |||||||||||||||||||||    
T  52805155 ctacaattaataagtaagggtgttattgataaatcaataataaatgttgcatcgaaacttgaaagtgacaagta 52805082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 40228339 - 40228280
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 75  Q
    ||||||||||||||||||| | ||| || ||||| ||||| |||||||||||||||||||    
T  40228339 tttctctctacaataaataagtaagagttttattaacaagccaataattaatgttgcatt 40228280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 19912153 - 19912215
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||||||    
T  19912153 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagta 19912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 38806320 - 38806382
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||||||    
T  38806320 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagta 38806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 43159890 - 43159967
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||| ||||||||||  ||||||| |||||| ||  ||| | ||||||||||||||||  ||||||||||||    
T  43159890 ttttctctctgcaataaatatttaagggtaatattgataaatcaacatttaatgttgcattgaattttgaaagtgaca 43159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 46188910 - 46188967
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 75  Q
    ||||||||||||||||| |||||  ||||||||||||  |||||||||||||| ||||    
T  46188910 tctctctacaataaataagcaagaatattattgacaaaccaataattaatgttacatt 46188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 12095402 - 12095464
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   ||||||||||||||||  |||| ||||||||||||||||    
T  12095402 gacatgtattttgaaacaaaaaatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 23771400 - 23771326
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||||||||||  |||||||| ||  |  || |||||| ||||||||||||||||  ||||||||||||    
T  23771400 tctctctacaataaataatcaagggtaataaaggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 23771326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 32980753 - 32980679
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||||||||||   ||||||| |||||| || ||| || ||||||||| ||||||  ||||||||||||    
T  32980753 tctctctacaataaataactaagggtaatattgataaaacattatttaatgttgtattgaattttgaaagtgaca 32980679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 44276837 - 44276775
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| |||||||||| |||||    
T  44276837 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagagagta 44276775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 52173863 - 52173786
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||| |||||||||| ||| |||| |||||  || |||| | ||| ||||||||||||  ||||||||||||    
T  52173863 ttttctctctgcaataaatattcaaaggtaatattggtaaaacaacatttattgttgcattgaactttgaaagtgaca 52173786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 37293469 - 37293437
Alignment:
Q  119 aaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||| ||||||||||||||||    
T  37293469 aaaatggacaagtattgtgaaacggagggagta 37293437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 51584442 - 51584490
Alignment:
Q  46 tattgacaagacaataattaatgttgcattgaaacttgaaagtgacaag 94  Q
    ||||||||| ||||||||||||||| |||||||| |||||  |||||||    
T  51584442 tattgacaaaacaataattaatgttacattgaaatttgaatatgacaag 51584490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 40783790 - 40783657
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40783790 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40783691  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  40783690 taaaatggacaagtattatgaaacggagggagta 40783657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 321767 - 321903
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  321767 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaaatatt 321866  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  321867 ctctaaaatggacaagtattatgaaacggagggagta 321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 23045412 - 23045279
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23045412 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 23045313  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  23045312 taaaatggacaagtattatgaaacggagggagta 23045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 284477 - 284610
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  284477 tctctctacaataaatatgcaagggtattattgataagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 284576  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  284577 taaaatggacaagtattatgaaacggagggagta 284610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 47037985 - 47037852
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  47037985 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaattattctt 47037886  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||| |||||||||||||||||||||||||||    
T  47037885 taaaatagacaagtattatgaaacggagggagta 47037852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 23526385 - 23526516
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 119  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  23526385 tctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattcttca 23526484  T
Q  120 aaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||    
T  23526485 aaatggacaagtattatgaaacggagggagta 23526516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 27211088 - 27210961
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||     
T  27211088 tctctctgcaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaatgtgacaagtattgtgaaacaaaattattctt 27210989  T
Q  118 taaaatggacaagtattatgaaacggag 145  Q
     ||||||||||| |||||||||||||||    
T  27210988 aaaaatggacaaatattatgaaacggag 27210961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 24772035 - 24771901
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    ||||||||||||||  |||| ||||||||| || |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  24772035 tctacaataaatatttaaggctattattgaaaaaacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctctaaa 24771936  T
Q  122 atggacaagtattatgaaacggagggagtactatg 156  Q
    |||||||||||||||||||||||||||||| ||||    
T  24771935 atggacaagtattatgaaacggagggagtattatg 24771901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 33082892 - 33083021
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  33082892 tctacaataaatatttaagggtattattgagaagacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctttaaa 33082991  T
Q  122 atggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||    
T  33082992 atggacaagtattatgaaacggagggagta 33083021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 46771782 - 46771910
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||     
T  46771782 tctctctacaataaatatgtaagagtattattgacaagaaaataattaatgttacattgaaacttgaaagtgataagtattgtgaaacaaaattattctt 46771881  T
Q  118 taaaatggacaagtattatgaaacggagg 146  Q
     |||||| |||||||||||||||||||||    
T  46771882 caaaatgaacaagtattatgaaacggagg 46771910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 40562416 - 40562293
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 119  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |    
T  40562416 tctctgcaataaatatgcaagg-tatcattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaatcattcttca 40562318  T
Q  120 aaatggacaagtattatgaaacgga 144  Q
    ||||||||||||||||| |||||||    
T  40562317 aaatggacaagtattataaaacgga 40562293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 40261418 - 40261320
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 116  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40261418 tctctctacaataaatatgtaagggtattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattct 40261320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 51064887 - 51064754
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | |||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  51064887 tctctctacaataaataggtaagggtattattgataaactaataattaacgttgcattgaaacttgaaagtgacaaataaagtgaaacaaaattattctc 51064788  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||| |||||| || ||||||    
T  51064787 taaaatggacaagtattgtgaaacagacggagta 51064754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 31003920 - 31003787
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | ||||||||||| |||||  ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  31003920 tctctctacaataaataggtaagggtattatggacaaaccaacaattaatgttgcattgaaacttgaaagtggcaagtaatgtgaaacaaaattattctc 31003821  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     ||||  || ||||||| |||||| |||||||||    
T  31003820 caaaagcgataagtattgtgaaacagagggagta 31003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18396838 - 18396973
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||| | ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||    
T  18396838 tctctctacaataaataagtaagggaattattgaaaagtcaataattaatgttgcattgaaacttgaaagtgacaaattatgtaaaacaaaattattctc 18396937  T
Q  118 taaaatggacaagtattatgaaacggagggagtact 153  Q
     ||||   ||||||||| ||||| ||||||||||||    
T  18396938 caaaagcaacaagtattgtgaaatggagggagtact 18396973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 27143145 - 27143011
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||| |||||| | |||||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||    
T  27143145 tctctctacagtaaataggtaagggtattattgacaaaccaataattaatgttgtattgaaacttg--agtgacaagtaatgtgaaacaaaattattctc 27143048  T
Q  118 taaaatggacaagtattatgaaacggagggagtacta 154  Q
     ||||  ||||| ||||||||| |||| |||||||||    
T  27143047 caaaagcgacaattattatgaagcggatggagtacta 27143011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 40052599 - 40052501
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||| |||||||| |||| | ||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40052599 tttctctctataataaataagcaacgatattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattatt 40052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 34458857 - 34458723
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||| ||| |||||| ||||||||||| |  ||  |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  34458857 tctctctataatgaatatgtaagggtattatcggtaaaccaataattaatgttgcatcgaaacttgaaagtgacaagtaaagtgaaacaaaattattctc 34458758  T
Q  118 taaaatggacaagtattatgaaacggagggagtac 152  Q
     ||||  ||||  |||| ||||||||| |||||||    
T  34458757 caaaagcgacatatattgtgaaacggaaggagtac 34458723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 23166983 - 23166858
Alignment:
Q  19 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctct 118  Q
    ||||||| ||||||||   ||| |||||||||||||  ||||||||||||||| |||||||||||||||| | || || |||||||||||||||||||||    
T  23166983 ctctctaaaataaatagataagagtattattgacaaatcaataattaatgttgtattgaaacttgaaagtaataaataatgtgaaacaaaattattctct 23166884  T
Q  119 aaaatggacaagtattatgaaacgga 144  Q
    ||||  ||| |||||| |||||||||    
T  23166883 aaaagcgacgagtattgtgaaacgga 23166858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 14925610 - 14925734
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 119  Q
    ||||||||||||||| | ||| |||||||||||||  |||||  ||| |||||||||||||||||||  ||||||||  ||||||||||||||| |||||    
T  14925610 tctctacaataaataggtaagagtattattgacaaaccaata--taaggttgcattgaaacttgaaaacgacaagtaaagtgaaacaaaattatgctcta 14925707  T
Q  120 aaatggacaagtattatgaaacggagg 146  Q
    |||  |||||||||| |||||||||||    
T  14925708 aaaacgacaagtattgtgaaacggagg 14925734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 24876714 - 24876831
Alignment:
Q  27 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgga 126  Q
    |||||||| | ||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||||| ||||  ||    
T  24876714 aataaataagtaagagtattattgacaaaccaataattaatgtcgcattgacacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaaacga 24876813  T
Q  127 caagtattatgaaacgga 144  Q
    |||||||| ||| |||||    
T  24876814 caagtattgtgagacgga 24876831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 31061590 - 31061463
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca---agtattgtgaaacaaaattattct 116  Q
    |||||||| ||||||||  |||||||||||| |||  |||||||||||||||||||||||||||| |||||||   |||| ||||||| ||||||||| |    
T  31061590 tctctacagtaaatatgtgagggtattattgtcaaaccaataattaatgttgcattgaaacttgagagtgacaagtagtaatgtgaaataaaattatttt 31061491  T
Q  117 ctaaaatggacaagtattatgaaacgga 144  Q
    | ||||  |||||||||| |||||||||    
T  31061490 ccaaaagtgacaagtattgtgaaacgga 31061463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 25929248 - 25929368
Alignment:
Q  24 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaat 123  Q
    |||||||||||   |||||||||||||| ||  ||||| |||||||||| |||||||||||||| | |||||    ||||||||||||||||| |||||     
T  25929248 tacaataaatagataagggtattattgataaatcaatatttaatgttgcgttgaaacttgaaaggggcaagtgaaatgaaacaaaattattctttaaaag 25929347  T
Q  124 ggacaagtattatgaaacgga 144  Q
     |||||||||| |||||||||    
T  25929348 cgacaagtattgtgaaacgga 25929368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 1837961 - 1837827
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta---ttgtgaaacaaaattatt 114  Q
    ||||| |||||||||||    ||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   |  |||||||||||||||    
T  1837961 tctctttacaataaatagattagggtattattgataaatcaataattaatgttgcattgaaacttaaaagtgacaagtaaattattgaaacaaaattatt 1837862  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||  ||||   ||| ||||||||||||||| ||||||    
T  1837861 cttcaaaa--aacatgtattatgaaacggatggagta 1837827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 1749457 - 1749515
Alignment:
Q  57 caataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1749457 caataactaatgttgcattgaaacttaaaagtaacaagtattgtgaaacaaaattattc 1749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 3657218 - 3657282
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaactt 82  Q
    ||||||||||||||||| | ||  |||||||||||||  ||||||||||||||||||||||||||    
T  3657218 tctctctacaataaataggtaaaagtattattgacaaaccaataattaatgttgcattgaaactt 3657282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 14350565 - 14350510
Alignment:
Q  60 taattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||||||||||||||||||| ||||||||||||| | | ||||||||||||||    
T  14350565 taattaatgttgcattgaaactttaaagtgacaagtaatataaaacaaaattattc 14350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 3943742 - 3943807
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtacta 154  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| |||||||||||||||||||    
T  3943742 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagtacta 3943807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 41959788 - 41959850
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||||||    
T  41959788 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagta 41959850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 49756742 - 49756684
Alignment:
Q  20 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 78  Q
    ||||| |||||||||   |||||||| |||||||| |||||||||| ||||||||||||    
T  49756742 tctctgcaataaatacttaagggtataattgacaaaacaataattattgttgcattgaa 49756684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 51064995 - 51065033
Alignment:
Q  113 ttctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  51064995 ttctttaaaatggacaagtattgtgaaacggagggagta 51065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 9589615 - 9589672
Alignment:
Q  94 gtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||||| ||||||||||   ||||||||||| |||| ||||| ||||||||||||||||    
T  9589615 gtattttgaaacaaaaaatttctctaaaatagacatgtattttgaaacggagggagta 9589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 52478110 - 52478170
Alignment:
Q  19 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 79  Q
    |||||||| |||||||   |||| ||||||||||||  ||||||||||||||| |||||||    
T  52478110 ctctctaccataaatagataaggatattattgacaaatcaataattaatgttgaattgaaa 52478170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 10981652 - 10981789
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981652 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 10981751  T
Q  118 taaaatggacaagtattatgaaacggagggagtactat 155  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  10981752 taaaatggacaaatattatgaaatggagggagtactat 10981789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 27813955 - 27814088
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27813955 tctctctacaataaatatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 27814054  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  27814055 taaaatggacaagtattatgaaacggagggagta 27814088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 36453257 - 36453124
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36453257 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 36453158  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||||||||||||||| |||||    
T  36453157 taaaatggacaagtattatgaaacggagagagta 36453124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 25614486 - 25614353
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25614486 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattattctc 25614387  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||| |||||||||||||||||||||    
T  25614386 taaaatggacaattattatgaaacggagggagta 25614353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 47110594 - 47110727
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47110594 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 47110693  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||| | ||||||||||||||||||||||||    
T  47110694 taaaatgaataagtattatgaaacggagggagta 47110727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 40349106 - 40349238
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  40349106 tctctctacaataaatatgcaagggtattattgaccaaacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaac-aaattattctc 40349204  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  40349205 taaaatggacaagtattatgaaacggagggagta 40349238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 27941119 - 27941013
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||    
T  27941119 tttctttctacaataaataagtaagggtattattgacaagccaataattaatgttgcaatgaaacttgaaagtgacaagtaatgtgaaacaaaattgttc 27941020  T
Q  116 tctaaaa 122  Q
    || ||||    
T  27941019 tccaaaa 27941013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 16662241 - 16662370
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    ||||||||||||| | |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||  |||    
T  16662241 tctacaataaataggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaa 16662340  T
Q  122 atggacaagtattatgaaacggagggagta 151  Q
    |  |||||||||| ||||| ||||||||||    
T  16662341 agtgacaagtattgtgaaatggagggagta 16662370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 17636601 - 17636730
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    ||||||||||||| | |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||  |||    
T  17636601 tctacaataaataggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaa 17636700  T
Q  122 atggacaagtattatgaaacggagggagta 151  Q
    |  |||||||||| ||||| ||||||||||    
T  17636701 agtgacaagtattgtgaaatggagggagta 17636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 3091655 - 3091755
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||||| ||| |||||||||  |||||||||||||||||    
T  3091655 tttctctctacaataaatatgtaagggtattattgacaaaccaatatttaatgttgcattgaaacttaaaaatgacaagtaaagtgaaacaaaattattc 3091754  T
Q  116 t 116  Q
    |    
T  3091755 t 3091755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 24456898 - 24456800
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 116  Q
    ||||||||||||| ||| |||||||||||||||| ||   | || |||||||||||||||||||||| |||||||||||  || |||||||||||||||    
T  24456898 tctctctacaatacataggcaagggtattattgataaattagtagttaatgttgcattgaaacttgagagtgacaagtaaagttaaacaaaattattct 24456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 8380079 - 8380157
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 93  Q
    |||||||||||||||||||| | ||||||||| || ||||  |||||| |||||||| |||||||||| ||||||||||    
T  8380079 ttttctctctacaataaataagtaagggtatttttaacaaaccaataactaatgttgtattgaaacttaaaagtgacaa 8380157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 16360549 - 16360653
Alignment:
Q  46 tattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggag 145  Q
    |||||||||  ||||| ||||||||| ||||||||||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||| |||||| ||     
T  16360549 tattgacaaaccaatatttaatgttgtattgaaacttgaaagtgacaagtaaagtgaagc-aaattattctccaaaaacgacaaatattgtgaaacagaa 16360647  T
Q  146 ggagta 151  Q
    ||||||    
T  16360648 ggagta 16360653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 3498888 - 3498813
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 93  Q
    ||||| || |||||||||| ||| ||||||| || ||  ||||||||||| ||||||||||| ||||| |||||||    
T  3498888 tctctttaaaataaatatgtaagagtattatcgataaatcaataattaattttgcattgaaagttgaatgtgacaa 3498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 35112545 - 35112438
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    ||||||||| ||||||||||   ||||||| |||||  || |||||| ||||||||||| ||||  ||||||||||||  ||   |||||||||||| ||    
T  35112545 ttttctctccacaataaataactaagggtaatattggtaaaacaatatttaatgttgcaatgaactttgaaagtgacagttaaattgaaacaaaattttt 35112446  T
Q  115 ctctaaaa 122  Q
    ||| ||||    
T  35112445 ctccaaaa 35112438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 6737252 - 6737294
Alignment:
Q  36 gcaagggtattattgacaagacaataattaatgttgcattgaa 78  Q
    |||||||||||||||| || |||||||||||| ||||||||||    
T  6737252 gcaagggtattattgataaaacaataattaatattgcattgaa 6737294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 7743531 - 7743433
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 116  Q
    ||||||||||||||||||    | |||||| ||| ||  ||||||||||  |||||||||||||| ||| |||||| ||  |||||| |||||||||||    
T  7743531 tctctctacaataaatatatctgagtattactgagaatccaataattaacattgcattgaaacttaaaaatgacaaataaagtgaaataaaattattct 7743433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 28200488 - 28200566
Alignment:
Q  62 attaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaa 140  Q
    ||||||| || ||| |||||| |||||||||||||  ||||||||||||| ||||  ||||  ||||| ||||||||||    
T  28200488 attaatgctgtattaaaacttaaaagtgacaagtaaagtgaaacaaaattgttcttaaaaaacgacaaatattatgaaa 28200566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 46563253 - 46563327
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||||||||||  |||||||| || || ||| |||||| ||||||||| | ||||  ||||||||||||    
T  46563253 tctctctacaataaataatcaagggtaataatgtcaaaacaatatttaatgttgtactgaactttgaaagtgaca 46563327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 24283697 - 24283621
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    ||||||||  ||||||||||  ||||||| |||||| || |||  | ||||||||||||||||  ||||||||||||    
T  24283697 tttctctccgcaataaatatctaagggtaatattgataaaacatcatttaatgttgcattgaactttgaaagtgaca 24283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 25059512 - 25059456
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggag 145  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||    
T  25059512 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 41480639 - 41480679
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcattgaa 78  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  41480639 aagggtattattgacaaaacaatagttaatattgcattgaa 41480679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 8626626 - 8626759
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8626626 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 8626725  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  8626726 taaaatggacaagtattatgaaacggagggagta 8626759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 13757351 - 13757484
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13757351 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 13757450  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||| ||||||    
T  13757451 taaaatggacaagtattatgaaacggatggagta 13757484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 1605722 - 1605855
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  1605722 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaatttgaaagtgacaagtattgtgaaacaaaattattctc 1605821  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  1605822 taaaatggacaagtattatgaaacggagggagta 1605855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 4129571 - 4129703
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4129571 tctctctacaataaatatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttc 4129669  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  4129670 taaaatggacaagtattatgaaacggagggagta 4129703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 7761444 - 7761581
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7761444 tctctctacaataaatatgcaagggtattattgacaaaataataattaatattgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctc 7761543  T
Q  118 taaaatggacaagtattatgaaacggagggagtactat 155  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7761544 taaaatggacaagtattatgaaacggagggagtactat 7761581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 15064828 - 15064695
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  15064828 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattatgaaacaaaattattctc 15064729  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     |||||||||||||||||||||||||||||||||    
T  15064728 caaaatggacaagtattatgaaacggagggagta 15064695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 29260336 - 29260469
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  29260336 tctctctacaataaatatgtaagggtattattgacaagacagtaattaatgttgcattgaaacttgaaaatgacaagtattttgaaacaaaattattctc 29260435  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  29260436 taaaatggacaagtattatgaaacggagggagta 29260469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 17942584 - 17942720
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  17942584 ttttctctctacaataaatatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattataaaacaaaattatt 17942683  T
Q  115 ctctaaaatggacaagtattatgaaacggagggagta 151  Q
    ||| |||||||||||||||||||||||||||||||||    
T  17942684 ctccaaaatggacaagtattatgaaacggagggagta 17942720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 31559871 - 31559737
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  31559871 tctctctacaataaatatgcaagggtattattaacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtaaaataaaattattctc 31559772  T
Q  118 taaaatggacaagtattatgaaacggagggagtac 152  Q
    ||||||||| |||||||||||||||||||||||||    
T  31559771 taaaatggagaagtattatgaaacggagggagtac 31559737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 8235769 - 8235895
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8235769 tctctctacaataaatatgtaagggtattattgataagacaataattaatattgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 8235868  T
Q  118 taaaatggacaagtattatgaaacgga 144  Q
    |||||| ||||||||||||||||||||    
T  8235869 taaaatagacaagtattatgaaacgga 8235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 30734616 - 30734483
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||| ||    
T  30734616 tctctctacaataaatatgcaagggtattattgataagataataattaatgttgcattgaaatttgaaaatgacaactattgtaaaacaaaattattttc 30734517  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     |||||||||||||||||||||| ||||| ||||    
T  30734516 caaaatggacaagtattatgaaaaggaggaagta 30734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 20398371 - 20398238
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||| || |||||||| | |||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||| ||    
T  20398371 tctctgtataataaataggtaagggtattattgacaatttaataattaatgttgcattaaaacttgaaagtggcaagtaaagtgaaacaaaattattttc 20398272  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
     ||||  |||| ||||| ||||||| ||||||||    
T  20398271 caaaagtgacatgtattgtgaaacgaagggagta 20398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 3798247 - 3798376
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    |||| |||||||| | |||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||| | ||||    
T  3798247 tctataataaataggtaagggtattattgataaactcataattaatgttgcattaaaacttgaaagtgacaagtaaagtgaaacaaaactattatttaaa 3798346  T
Q  122 atggacaagtattatgaaacggagggagta 151  Q
    |  ||||  ||||||||| | |||||||||    
T  3798347 aacgacatatattatgaagcagagggagta 3798376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 26860908 - 26861031
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||  |||||||| | || ||||||||||||||  ||||||| ||||||| |||||||| ||||| |||||||||  |||||||||| ||||||||    
T  26860908 tctctctgtaataaataggtaaaggtattattgacaaatcaataatcaatgttgtattgaaacatgaaaatgacaagtaaagtgaaacaaacttattctc 26861007  T
Q  118 taaaatggacaagtattatgaaac 141  Q
     ||||  |||| ||||| ||||||    
T  26861008 caaaaatgacatgtattgtgaaac 26861031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 1814762 - 1814870
Alignment:
Q  43 tattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 142  Q
    ||||||||||||  ||||||| |||||||||||| || || |||||||||||||  |||||| |||||||||||  ||||  |||| ||||| |||||||    
T  1814762 tattattgacaaaccaataatcaatgttgcattggaaattaaaagtgacaagtaaagtgaaataaaattattcttcaaaagtgacatgtattgtgaaacg 1814861  T
Q  143 gagggagta 151  Q
     ||| ||||    
T  1814862 aaggaagta 1814870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 847900 - 847831
Alignment:
Q  27 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 96  Q
    |||||||||  ||| |||||||||||||  ||||||||||||||||||||||  |||||| |||||||||    
T  847900 aataaatatttaagagtattattgacaaagcaataattaatgttgcattgaactttgaaaatgacaagta 847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 19996384 - 19996322
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||||||    
T  19996384 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagta 19996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 24120645 - 24120739
Alignment:
Q  59 ataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtact 153  Q
    ||||||| ||||||||| |||||  ||||||||||||| ||||||||| || | ||||| ||||  ||||||| || ||||| ||||||| ||||    
T  24120645 ataattagtgttgcattaaaactaaaaagtgacaagtaatgtgaaacacaaattttctccaaaaacgacaagttttttgaaatggagggaatact 24120739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 15064933 - 15064971
Alignment:
Q  113 ttctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064933 ttctctaaaatggacatgtattttgaaacggagggagta 15064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 31244877 - 31244951
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||| |||||||||||  |||  || |||||| || |||| ||||||||||||||||||  ||||||||||||    
T  31244877 tctctccacaataaatatctaagaataatattgataaaacaagaattaatgttgcattgaactttgaaagtgaca 31244951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 879350 - 879317
Alignment:
Q  45 ttattgacaagacaataattaatgttgcattgaa 78  Q
    |||||||||| |||||||||||||||||||||||    
T  879350 ttattgacaaaacaataattaatgttgcattgaa 879317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 22784793 - 22784870
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    ||||||||| |||||||||| | |||| || |||||  || |||| | ||||||||||||||||  ||||||||||||    
T  22784793 ttttctctccacaataaataagtaaggataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 22784870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 306 - 438
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  306 tctctctacaataaatatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttc 404  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||||||    
T  405 taaaatggacaagtattatgaaacggagggagta 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 45601 - 45730
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    ||||||||||||||  |||| ||||||||| || |||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  45601 tctacaataaatatttaaggttattattgataatacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctctaaa 45700  T
Q  122 atggacaagtattatgaaacggagggagta 151  Q
    ||||||||||||||||||||||||||||||    
T  45701 atggacaagtattatgaaacggagggagta 45730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 400 - 287
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  400 tctctctacaataaatatgtaatgatattattgacaagacaataattaatgttgcattaaaatttaaaagtgacaagtattgtgaaacaaaattattctc 301  T
Q  118 taaaatggacaagt 131  Q
    ||||||||||||||    
T  300 taaaatggacaagt 287  T

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Target: scaffold0168 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 7812 - 7945
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||| ||||||||||| | ||| |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||||  |||||||||||     
T  7812 tctctttacaataaataggtaagagtattattgacaaaccgataattaatgttgcattaaaacttgaaagtgacaagtaatgtgaattaaaattattctt 7911  T
Q  118 taaaatggacaagtattatgaaacggagggagta 151  Q
    |||||  |||||||||| |||||| || ||||||    
T  7912 taaaaacgacaagtattgtgaaacagatggagta 7945  T

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Target: scaffold0343 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 7036 - 6911
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 114  Q
    |||||||||||||||||||| | ||| |||||||||||| | |||||||||||||||||||||||||| |||  ||||| || | |||||||||||||||    
T  7036 ttttctctctacaataaataagtaagagtattattgacacgtcaataattaatgttgcattgaaactt-aaacggacaaataatatgaaacaaaattatt 6938  T
Q  115 ctctaaaatggacaagtattatgaaac 141  Q
    ||| ||||  |||||||||| ||||||    
T  6937 ctccaaaaacgacaagtattgtgaaac 6911  T

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Target: scaffold0056 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 71231 - 71350
Alignment:
Q  22 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 121  Q
    ||||||||||||| | |||||||| ||| ||||  ||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||||||  |||    
T  71231 tctacaataaataggtaagggtataattaacaaaccaataattaattttgcattcaaacttaaaagtgacaagtaatgtgaaataaaattattcttcaaa 71330  T
Q  122 atggacaagtattatgaaac 141  Q
    |  |||||||||| ||||||    
T  71331 aacgacaagtattgtgaaac 71350  T

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Target: scaffold0025 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 65278 - 65199
Alignment:
Q  38 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    |||||||||||||||||  ||||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||||    
T  65278 aagggtattattgacaaaccaataattaatattgcattgaaatttaaaagtgacaagtaatatgaaacaaaattattctc 65199  T

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Target: scaffold0076 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 15458 - 15351
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 115  Q
    ||||||||||||||||| | | ||| |||||||||||||  | |||||||||||||||||||||||| ||||| ||| |||  ||||||||| ||| |||    
T  15458 tttctctctacaataaaaaagtaagcgtattattgacaaaccgataattaatgttgcattgaaacttaaaagttacatgtaaagtgaaacaatattgttc 15359  T
Q  116 tctaaaat 123  Q
     |||||||    
T  15358 actaaaat 15351  T

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Target: scaffold0939 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 1110 - 1184
Alignment:
Q  43 tattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 117  Q
    ||||||||| ||  |||||||||||||||||| ||||||| ||| |||||||||   | ||||||||||||||||    
T  1110 tattattgataaaccaataattaatgttgcatcgaaacttaaaaatgacaagtaaaataaaacaaaattattctc 1184  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 252707 - 252633
Alignment:
Q  18 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||||||||||  |||||||| ||  ||||| |||||| ||||||||| ||||||  ||||||||||||    
T  252707 tctctctacaataaataatcaagggtaataaagacaaaacaatatttaatgttgtattgaactttgaaagtgaca 252633  T

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Target: scaffold0060 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 10884 - 10964
Alignment:
Q  16 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 96  Q
    |||||||| |||||||||| | |||  ||||||||||||  ||||| ||||||||||||  |||||| || ||||||||||    
T  10884 tttctctccacaataaataggtaagaatattattgacaaatcaatatttaatgttgcatataaacttaaatgtgacaagta 10964  T

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Target: scaffold1431 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 32 - 1
Alignment:
Q  18 tctctctacaataaatatgcaagggtattatt 49  Q
    ||||||||||||||||||||||||||||||||    
T  32 tctctctacaataaatatgcaagggtattatt 1  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 147263 - 147330
Alignment:
Q  25 acaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||||  ||||||| |||||| || |||| | ||||||||||||||||  ||||||||||||    
T  147263 acaataaatatctaagggtaatattgataaaacaacatttaatgttgcattgaactttgaaagtgaca 147330  T

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Target: scaffold0257 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 23851 - 23913
Alignment:
Q  89 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 151  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||| ||||||    
T  23851 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggatggagta 23913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 23252 - 23175
Alignment:
Q  15 ttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 92  Q
    |||||||||  |||||||||  |||||||| || |||||| |||| | ||||||||| ||||||  ||||||||||||    
T  23252 ttttctctcggcaataaataaccaagggtaataatgacaaaacaacatttaatgttgtattgaactttgaaagtgaca 23175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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