View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5520-Insertion-9 (Length: 280)
Name: NF5520-Insertion-9
Description: NF5520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5520-Insertion-9 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 6 - 280
Target Start/End: Original strand, 4038209 - 4038483
Alignment:
| Q |
6 |
caaatggtactgacaagttcaggattacaacactaatgacagagaataggatgaaattattctcttcacacataaaacctcacatcagaaatccatgtaa |
105 |
Q |
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| T |
4038209 |
caaatggtactgacaagttcaggattacaacactaatgacagagaatatgatgaaattattctcttcacacataaaacctcacatcagaaatccatgtaa |
4038308 |
T |
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| Q |
106 |
taccaagtcaaacaagctgcaccaattaccaagtcaaagaaactgccaaatgtttagatatagcagcctaaattataaacaaacaagtgaataaaactaa |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4038309 |
taccaagtcaaacaagctgcaccaattaccaagtcaaagaaactgccaaatgtttagatatagcagcctaaattataaacaaacaagtgaataaaactaa |
4038408 |
T |
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| Q |
206 |
ttagtatgacttattcagcttaaaaatttaactagttctaaggttcactcactctcccttcacatataaatgcac |
280 |
Q |
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| T |
4038409 |
ttagtatgacttattcagcttaaaaatttaactagttctaaggttcactcactctcccttcacatataaatgcac |
4038483 |
T |
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