View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5522-Insertion-3 (Length: 1020)

Name: NF5522-Insertion-3
Description: NF5522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5522-Insertion-3
NF5522-Insertion-3
[»] chr6 (13 HSPs)
chr6 (503-857)||(16858901-16859255)
chr6 (8-377)||(9581822-9582205)
chr6 (383-435)||(16864551-16864603)
chr6 (958-1020)||(16858734-16858800)
chr6 (146-191)||(1030277-1030322)
chr6 (146-191)||(12735265-12735310)
chr6 (146-191)||(21296752-21296797)
chr6 (145-191)||(4494893-4494939)
chr6 (157-191)||(30579864-30579898)
chr6 (150-191)||(5937630-5937671)
chr6 (146-191)||(9444951-9444996)
chr6 (146-191)||(9677229-9677274)
chr6 (146-191)||(12256471-12256515)
[»] chr7 (25 HSPs)
chr7 (503-857)||(47930556-47930910)
chr7 (377-449)||(47930432-47930504)
chr7 (146-191)||(18378396-18378441)
chr7 (146-191)||(35103490-35103535)
chr7 (145-191)||(46207753-46207799)
chr7 (146-191)||(1079714-1079759)
chr7 (146-191)||(47589575-47589620)
chr7 (146-191)||(47677599-47677644)
chr7 (146-191)||(48103696-48103741)
chr7 (155-191)||(44406878-44406914)
chr7 (955-1007)||(47931016-47931071)
chr7 (149-191)||(3536276-3536318)
chr7 (146-188)||(4495821-4495863)
chr7 (141-191)||(7670423-7670473)
chr7 (145-191)||(13955473-13955519)
chr7 (149-191)||(18505679-18505721)
chr7 (145-191)||(35224111-35224157)
chr7 (145-191)||(44454505-44454551)
chr7 (146-191)||(6023303-6023348)
chr7 (146-191)||(7388061-7388106)
chr7 (146-191)||(10025988-10026033)
chr7 (146-191)||(19416508-19416553)
chr7 (146-191)||(20576432-20576477)
chr7 (146-191)||(27993051-27993096)
chr7 (150-191)||(44819515-44819556)
[»] chr3 (34 HSPs)
chr3 (503-857)||(54943356-54943710)
chr3 (503-857)||(5881906-5882261)
chr3 (374-449)||(54943229-54943304)
chr3 (400-449)||(5881805-5881854)
chr3 (148-191)||(52575943-52575986)
chr3 (955-1020)||(5882360-5882429)
chr3 (158-191)||(7202938-7202971)
chr3 (146-191)||(32843284-32843329)
chr3 (146-190)||(53705650-53705694)
chr3 (955-1007)||(54943817-54943872)
chr3 (143-190)||(28052624-28052671)
chr3 (143-190)||(28063049-28063096)
chr3 (149-191)||(3176995-3177037)
chr3 (141-191)||(4332689-4332739)
chr3 (145-191)||(28244126-28244172)
chr3 (146-191)||(1757691-1757736)
chr3 (146-191)||(3582776-3582821)
chr3 (146-191)||(7738663-7738708)
chr3 (146-191)||(7868716-7868761)
chr3 (146-191)||(9598433-9598478)
chr3 (146-191)||(9790584-9790629)
chr3 (146-191)||(10295186-10295231)
chr3 (146-191)||(10926463-10926508)
chr3 (146-191)||(18870747-18870792)
chr3 (146-191)||(21506780-21506825)
chr3 (146-191)||(22722396-22722441)
chr3 (150-191)||(23316387-23316428)
chr3 (146-191)||(28150743-28150788)
chr3 (146-191)||(33223862-33223907)
chr3 (150-191)||(34442469-34442510)
chr3 (150-191)||(41030163-41030204)
chr3 (146-191)||(44579630-44579675)
chr3 (146-191)||(47943292-47943337)
chr3 (146-191)||(48531272-48531317)
[»] scaffold0182 (3 HSPs)
scaffold0182 (503-857)||(629-983)
scaffold0182 (377-448)||(503-574)
scaffold0182 (955-1020)||(1099-1168)
[»] chr4 (23 HSPs)
chr4 (503-853)||(43946032-43946381)
chr4 (377-449)||(43946433-43946505)
chr4 (523-596)||(50784347-50784420)
chr4 (149-191)||(23154591-23154633)
chr4 (146-191)||(241406-241451)
chr4 (146-191)||(9913893-9913938)
chr4 (377-418)||(26392644-26392685)
chr4 (158-191)||(28031818-28031851)
chr4 (146-191)||(35287529-35287574)
chr4 (980-1020)||(43945856-43945897)
chr4 (377-418)||(46122202-46122243)
chr4 (151-191)||(34303486-34303526)
chr4 (144-191)||(9946419-9946466)
chr4 (145-191)||(4916148-4916194)
chr4 (145-191)||(20799416-20799462)
chr4 (145-191)||(24378373-24378419)
chr4 (145-191)||(27594320-27594366)
chr4 (145-191)||(37725743-37725789)
chr4 (146-191)||(10303533-10303578)
chr4 (146-191)||(36061397-36061442)
chr4 (146-191)||(39606589-39606633)
chr4 (146-191)||(50362161-50362206)
chr4 (146-191)||(54859731-54859776)
[»] chr5 (24 HSPs)
chr5 (503-722)||(12833857-12834080)
chr5 (503-722)||(12865835-12866058)
chr5 (754-857)||(12831237-12831340)
chr5 (754-857)||(12863216-12863319)
chr5 (377-446)||(12834137-12834206)
chr5 (377-446)||(12866115-12866184)
chr5 (145-191)||(34191426-34191472)
chr5 (142-191)||(3630649-3630698)
chr5 (146-191)||(5551303-5551348)
chr5 (146-191)||(35270703-35270748)
chr5 (377-418)||(11397078-11397119)
chr5 (146-191)||(27721697-27721742)
chr5 (147-191)||(22619869-22619913)
chr5 (144-191)||(5485178-5485225)
chr5 (146-191)||(6489001-6489046)
chr5 (146-187)||(7336341-7336382)
chr5 (146-191)||(8410467-8410512)
chr5 (146-191)||(8543570-8543615)
chr5 (143-192)||(10359618-10359667)
chr5 (146-191)||(15889405-15889450)
chr5 (146-191)||(28207126-28207171)
chr5 (146-191)||(34436845-34436890)
chr5 (146-191)||(42473888-42473933)
chr5 (146-191)||(42505866-42505911)
[»] chr1 (22 HSPs)
chr1 (145-191)||(5503787-5503833)
chr1 (146-191)||(47835801-47835846)
chr1 (155-191)||(23203325-23203361)
chr1 (146-191)||(13590104-13590149)
chr1 (146-191)||(13673539-13673584)
chr1 (146-191)||(15668492-15668537)
chr1 (146-187)||(20481094-20481135)
chr1 (155-191)||(47340790-47340826)
chr1 (147-191)||(50040351-50040395)
chr1 (144-191)||(21400045-21400092)
chr1 (146-192)||(17139538-17139584)
chr1 (145-191)||(23524817-23524863)
chr1 (149-191)||(26998601-26998643)
chr1 (146-188)||(39452454-39452496)
chr1 (145-191)||(44243866-44243912)
chr1 (145-191)||(48681955-48682001)
chr1 (146-191)||(11701960-11702005)
chr1 (146-191)||(29739331-29739376)
chr1 (146-191)||(32007619-32007664)
chr1 (146-191)||(37045168-37045213)
chr1 (146-191)||(41763177-41763222)
chr1 (146-191)||(44860905-44860950)
[»] scaffold0012 (1 HSPs)
scaffold0012 (146-191)||(118813-118858)
[»] chr8 (19 HSPs)
chr8 (146-191)||(24023437-24023482)
chr8 (157-191)||(2508610-2508644)
chr8 (157-191)||(18638105-18638139)
chr8 (146-191)||(8020304-8020349)
chr8 (146-191)||(8137929-8137974)
chr8 (150-191)||(8461858-8461899)
chr8 (146-191)||(16340320-16340365)
chr8 (146-191)||(33445564-33445609)
chr8 (147-191)||(10225320-10225364)
chr8 (155-191)||(43330277-43330313)
chr8 (145-191)||(8544621-8544667)
chr8 (145-191)||(11708979-11709025)
chr8 (146-191)||(4623622-4623667)
chr8 (146-191)||(14975885-14975930)
chr8 (146-191)||(17693267-17693312)
chr8 (150-191)||(26799182-26799223)
chr8 (146-191)||(33105385-33105430)
chr8 (146-191)||(39821878-39821923)
chr8 (150-191)||(40919381-40919422)
[»] chr2 (22 HSPs)
chr2 (149-191)||(37133002-37133044)
chr2 (146-191)||(7201501-7201546)
chr2 (146-191)||(9842224-9842269)
chr2 (146-191)||(17736787-17736832)
chr2 (146-191)||(18881183-18881228)
chr2 (146-191)||(21929465-21929509)
chr2 (146-191)||(29133506-29133551)
chr2 (146-191)||(43424653-43424698)
chr2 (147-191)||(4226993-4227037)
chr2 (146-190)||(17328029-17328073)
chr2 (148-191)||(10109668-10109711)
chr2 (141-191)||(346146-346196)
chr2 (149-191)||(32887356-32887398)
chr2 (146-191)||(6765604-6765649)
chr2 (146-191)||(17413354-17413399)
chr2 (146-191)||(22709079-22709124)
chr2 (146-191)||(30019917-30019962)
chr2 (146-191)||(30040733-30040778)
chr2 (146-191)||(30110211-30110256)
chr2 (146-191)||(30234871-30234916)
chr2 (146-191)||(31582180-31582225)
chr2 (146-191)||(40365428-40365473)
[»] scaffold0460 (1 HSPs)
scaffold0460 (146-191)||(1247-1292)
[»] scaffold0006 (1 HSPs)
scaffold0006 (146-191)||(171153-171198)
[»] scaffold0121 (1 HSPs)
scaffold0121 (153-191)||(3598-3636)
[»] scaffold0098 (1 HSPs)
scaffold0098 (146-191)||(5419-5464)
[»] scaffold0011 (1 HSPs)
scaffold0011 (146-191)||(185257-185302)


Alignment Details
Target: chr6 (Bit Score: 287; Significance: 1e-160; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 503 - 857
Target Start/End: Complemental strand, 16859255 - 16858901
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||    
T  16859255 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaattttccttgattttaagtagttaaaaattagagattatatgttaaagtt 16859156  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 701  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16859155 gttttatgtcatgatatcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 16859056  T
Q  702 gaaaagagtgaaagtgtacttkgacaatnnnnnnnttaaatagagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaa 801  Q
    ||||||| ||||||||||||| ||||||       | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16859055 gaaaagaatgaaagtgtactt-gacaataaaaaaatgaaataaagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaa 16858957  T
Q  802 attcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattctatc 857  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16858956 attcaaaattaccaatagcatatgttccatcctaaaaagttagcatatattctatc 16858901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 9581822 - 9582205
Alignment:
Q  8 ctcttaatttcaatgttcttcaagttttatgtgctccatttcacatttactcatatataaatgagttgaacggaaatacgaagatttatggcttaggttg 107  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9581822 ctcttaatttcaatgttcttcaagttttttgtgctccctttcacatttactcatatataaatgagttgaacggaaatacgaagttttatggcttaggttg 9581921  T
Q  108 tcaaagttgctttccacgtcattagagcacttgcttaggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat------tttaaatccg 201  Q
    |||| |||| |||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||      || ||||||     
T  9581922 tcaaggttggtttccaggttattagagcacttgcttaggttctcgtgagcttagctcagttggttggaacaatgcataaaatatacaaggttcaaatccc 9582021  T
Q  202 a-ccact----nnnnnnnnngagcacttgcttagaaaataagagacaatgtgccttata--agagcaaaatacggaag-aatgaaccaagttatagttga 293  Q
    | |||||             |||||||||||||| ||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||    
T  9582022 agccactaccaaaaaaaaaagagcacttgcttaggaaataagagacaatgtgccttataagagagcaaaatacagaagaaatgaaccaagttatagttga 9582121  T
Q  294 agaaaaaaccaacatgtaagtttccttaggaaaaaacataagctagttctctagctttgcactttggtgctctttttagtttca 377  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9582122 agaaaagaccaacatgtaagtttccttaggaaaaaacataagctagttctctagctttgcactttggtgctctttttagtttca 9582205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 16864603 - 16864551
Alignment:
Q  383 gagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaa 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16864603 gagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaa 16864551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 958 - 1020
Target Start/End: Complemental strand, 16858800 - 16858734
Alignment:
Q  958 aactcaaaccctaaaac--ttaaat-ttttaaatcataaaatccttctaccc-atctgaactctgca 1020  Q
    ||||||||||||||||   |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  16858800 aactcaaaccctaaaaacattaaatattttaaatcataaaatccttctacccaatctgaactctgca 16858734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 1030277 - 1030322
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||    
T  1030277 gtcctcgtaagcttagctcaattggttagtacaatgcataaaatat 1030322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 12735310 - 12735265
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||    
T  12735310 gtcctcgtgagcttaactcagttggttgggacaatgcataaaatat 12735265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 21296752 - 21296797
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||    
T  21296752 gtcctcgtgagtttagctcagttggttgggacaatgcataaaatat 21296797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 4494939 - 4494893
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||||||||||||||  | ||||||||||||||||    
T  4494939 ggtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 4494893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 30579864 - 30579898
Alignment:
Q  157 cttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||| ||||||||||||||||    
T  30579864 cttagctcagttggttgggacaatgcataaaatat 30579898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 5937630 - 5937671
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| |||||||||||||||||||  ||||||||||||||||    
T  5937630 tcgtgagcttagctcagttggttgagacaatgcataaaatat 5937671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 9444951 - 9444996
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  |||||||| |||||||||    
T  9444951 gtcctcgtgagcttagctcagttggtatgaacaatgtataaaatat 9444996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 9677229 - 9677274
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| | ||||||||||| ||||    
T  9677229 gtcctcgtgagcttagctcagttggtttggacaatgcataatatat 9677274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 12256471 - 12256515
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||||    
T  12256471 gtcctcgtgagcttagctcagttggtt-gaataatgcataaaatat 12256515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 503 - 857
Target Start/End: Original strand, 47930556 - 47930910
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||    
T  47930556 ggagttgggtttgatgaagtaaaagcgcatttgcatgctatcagatgtaaatctgccttgattttaagtagttaagaattagagattatatgttaaagtt 47930655  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 701  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47930656 gttttatgtcatgatttcaagcaaaacgtaatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 47930755  T
Q  702 gaaaagagtgaaagtgtacttkgacaatnnnnnnnttaaatagagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaa 801  Q
    ||||||| ||||||||||  | ||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47930756 gaaaagaatgaaagtgta-atggacaataaaaaaattaaataaagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaa 47930854  T
Q  802 attcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattctatc 857  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47930855 attcaaaattaccaatagcatatgttccatcctaaaaagttagcatatattctatc 47930910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 377 - 449
Target Start/End: Original strand, 47930432 - 47930504
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttggtc 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47930432 actagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatcaaaagaaaatgttggtc 47930504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 18378396 - 18378441
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  18378396 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatat 18378441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 35103490 - 35103535
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  35103490 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatat 35103535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 46207753 - 46207799
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||    
T  46207753 ggtcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 46207799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 1079759 - 1079714
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||    
T  1079759 gtcctcgtgagcttaactcagttagttggaacaatgcataaaatat 1079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 47589620 - 47589575
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||    
T  47589620 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 47589575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 47677644 - 47677599
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||    
T  47677644 gtcctcgtgagtttagctcagttggttagaacaatgcataaaatat 47677599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 48103741 - 48103696
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||    
T  48103741 gtcctcgtgagcttaactcagttggttgggacaatgcataaaatat 48103696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 44406914 - 44406878
Alignment:
Q  155 agcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44406914 agcttagctcagttggttgggacaatgcataaaatat 44406878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 955 - 1007
Target Start/End: Original strand, 47931016 - 47931071
Alignment:
Q  955 cacaactcaaaccctaaaac--ttaaatttt-taaatcataaaatccttctaccca 1007  Q
    |||||||||||||||||||   ||||||||| ||||||||||||||||||||||||    
T  47931016 cacaactcaaaccctaaaaacattaaattttttaaatcataaaatccttctaccca 47931071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 3536318 - 3536276
Alignment:
Q  149 ctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||    
T  3536318 ctcgtgagctaagctcagttggttggaacaatgcataatatat 3536276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 4495863 - 4495821
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaa 188  Q
    |||||||| ||||||| |||| |||||||||||||||||||||    
T  4495863 gtcctcgtgagcttagttcagctggttggaacaatgcataaaa 4495821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 7670423 - 7670473
Alignment:
Q  141 cttaggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| ||| |||| |||||||||||||||||| ||||||||||||| ||||    
T  7670423 cttatgtcttcgtgagcttagctcagttggtttgaacaatgcataatatat 7670473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 13955473 - 13955519
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| ||| |||||||||||||||||  ||||||||||||||||||    
T  13955473 ggtccgcgtgagcttagctcagttggtatgaacaatgcataaaatat 13955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 18505721 - 18505679
Alignment:
Q  149 ctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| ||||||||||||||||| || ||||||||||||||||    
T  18505721 ctcgtgagcttagctcagttggtagggacaatgcataaaatat 18505679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 35224111 - 35224157
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| | ||||| |||||||||||| ||||||||||||||||    
T  35224111 ggtcctcgtgaacttagttcagttggttgggacaatgcataaaatat 35224157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 44454505 - 44454551
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||| |||||||||| || ||||||||||||||||    
T  44454505 ggtcctcgtgagcttaactcagttggtagggacaatgcataaaatat 44454551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 6023303 - 6023348
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| | ||||||| ||||||||    
T  6023303 gtcctcgtgagcttagctcagttggtttggacaatgcttaaaatat 6023348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 7388106 - 7388061
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  7388106 gtcctcgtgagcttaactcagttggttgggacaatgcataatatat 7388061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 10025988 - 10026033
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||| | ||||||||||||||||    
T  10025988 gtcctcgtgagcttaactcagttggtttggacaatgcataaaatat 10026033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 19416508 - 19416553
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  19416508 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 19416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 20576477 - 20576432
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||| ||||||| |||||| |||||||||    
T  20576477 gtcctcgtgagcttagctcagctggttgggacaatgtataaaatat 20576432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 27993096 - 27993051
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||  ||||||||||||||||||    
T  27993096 gtcctcgtgagcttaactcagttggtatgaacaatgcataaaatat 27993051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 44819556 - 44819515
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  44819556 tcgtgagcttagctcagttgattagaacaatgcataaaatat 44819515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 281; Significance: 1e-157; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 503 - 857
Target Start/End: Original strand, 54943356 - 54943710
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||    
T  54943356 ggagttgggtttgatgaagtaaaagcgcatttgcatgctatcagatgtaaatctgccttgattttaagtagttaagaattagagattatatgttaaagtt 54943455  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 701  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54943456 gttttatgtcatgatttcaagcaaaacgtaatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 54943555  T
Q  702 gaaaagagtgaaagtgtacttkgacaatnnnnnnnttaaatagagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaa 801  Q
    ||||||| ||||||||||  | ||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54943556 gaaaagaatgaaagtgta-atggacaataaaaaaattaaataaagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaa 54943654  T
Q  802 attcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattctatc 857  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54943655 attcaaaattaccaatagcatatgttccatcctaaaaagttagcatatattctatc 54943710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 503 - 857
Target Start/End: Original strand, 5881906 - 5882261
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||    
T  5881906 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttaccttgattttaagtagttaagaattagagattatatgttaaagtt 5882005  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 701  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5882006 gttttatgtcatgatttaaaggaaaacgtgatttactggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 5882105  T
Q  702 gaaaagagtgaaagtgtacttkgacaatnnnnnnnttaaatagagatttaaggt-aaaaacttggattttaccttgtaggcctatattttaaaggtaaaa 800  Q
    ||||||| ||||||||||| | ||||||       ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5882106 gaaaagaatgaaagtgtacat-gacaataaaaaaattaaataaagatttaaggtaaaaaacttggattttaccttgtaggcctatattttaaaggtaaaa 5882204  T
Q  801 aattcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattctatc 857  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5882205 aattcaaaattaccaataacatatgttccatcctaaaaagttagcatatattctatc 5882261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 54943229 - 54943304
Alignment:
Q  374 ttcactagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttggtc 449  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54943229 ttcactagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatcaaaagaaaatgttggtc 54943304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 5881805 - 5881854
Alignment:
Q  400 gcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttggtc 449  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5881805 gcacgggtttgtttaaattttgtaacataaatgaaaagaaaatgttggtc 5881854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 52575943 - 52575986
Alignment:
Q  148 cctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  52575943 cctcgtaagcttagctcagttggtatgaacaatgcataaaatat 52575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 955 - 1020
Target Start/End: Original strand, 5882360 - 5882429
Alignment:
Q  955 cacaactcaaaccctaaaac--ttaaatttt-taaatcataaaatccttctaccc-atctgaactctgca 1020  Q
    |||||||||||||||||||   ||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  5882360 cacaactcaaaccctaaaaacattaaattttttaaatcataaaatccgtctacccaatctgaactctgca 5882429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 7202971 - 7202938
Alignment:
Q  158 ttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||||||||||||    
T  7202971 ttagctcagttggttggaacaatgcataaaatat 7202938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 32843329 - 32843284
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| | ||||||||||||||||    
T  32843329 gtcctcgtgagcttagctcagttggtttggacaatgcataaaatat 32843284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 53705694 - 53705650
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaata 190  Q
    |||| |||||||||||||||||||||  |||||||||||||||||    
T  53705694 gtccccgtaagcttagctcagttggtaagaacaatgcataaaata 53705650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 955 - 1007
Target Start/End: Original strand, 54943817 - 54943872
Alignment:
Q  955 cacaactcaaaccctaaaac--ttaaatttt-taaatcataaaatccttctaccca 1007  Q
    |||||||||||||||||||   ||||||||| ||||||||||||||||||||||||    
T  54943817 cacaactcaaaccctaaaaacattaaattttttaaatcataaaatccttctaccca 54943872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 28052624 - 28052671
Alignment:
Q  143 taggtcctcgtaagcttagctcagttggttggaacaatgcataaaata 190  Q
    |||||| |||| |||||||||||  |||||||||||||||||||||||    
T  28052624 taggtcatcgtgagcttagctcaaatggttggaacaatgcataaaata 28052671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 28063049 - 28063096
Alignment:
Q  143 taggtcctcgtaagcttagctcagttggttggaacaatgcataaaata 190  Q
    |||||| |||| |||||||||||  |||||||||||||||||||||||    
T  28063049 taggtcatcgtgagcttagctcaaatggttggaacaatgcataaaata 28063096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 3177037 - 3176995
Alignment:
Q  149 ctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||| |||||||||| |||||||||||||| ||||    
T  3177037 ctcgtaagcttaactcagttggtaggaacaatgcataatatat 3176995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 4332739 - 4332689
Alignment:
Q  141 cttaggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||||| ||||    
T  4332739 cttatgtcctcgtgagcttagctcagttggtttgaataatgcataatatat 4332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 28244172 - 28244126
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  28244172 ggtcctcgtgagcttaactcagttggtatgaacaatgcataaaatat 28244126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 1757736 - 1757691
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| |||||||||| |||||||||||||| ||||    
T  1757736 gtcctcgtgagcttaactcagttggtaggaacaatgcataatatat 1757691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 3582776 - 3582821
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| || ||||||||||||||||| | ||||||||||||||    
T  3582776 gtcctcgtgagattagctcagttggttgggagaatgcataaaatat 3582821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 7738663 - 7738708
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| |||||||||| || ||||||||||||||||    
T  7738663 gtcctcgtgagcttaactcagttggtagggacaatgcataaaatat 7738708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 7868716 - 7868761
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  ||||||||||||| ||||    
T  7868716 gtcctcgtgagcttagctcagttggtaagaacaatgcataatatat 7868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 9598433 - 9598478
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||| |||||||||||| |||||| |||||||||    
T  9598433 gtcctcgtgagcttagttcagttggttgggacaatgtataaaatat 9598478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 9790629 - 9790584
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||| |||||||| |||| |||||||| |||||||    
T  9790629 gtcctcgtaagcttaactcagttgtttgggacaatgcaaaaaatat 9790584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 10295186 - 10295231
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| |||||||  ||||||||||    
T  10295186 gtcctcgtgagcttagctcagttggtaggaacaaatcataaaatat 10295231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 10926463 - 10926508
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||||  | ||||||||||| ||||    
T  10926463 gtcctcgtaagcttagctcagttggtaaggacaatgcataatatat 10926508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 18870792 - 18870747
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 18870747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 21506825 - 21506780
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  21506825 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 21506780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 22722396 - 22722441
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||| ||  ||||||||||||||||||    
T  22722396 gtcctcgtgagcttagctcagttagtatgaacaatgcataaaatat 22722441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 23316428 - 23316387
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  23316428 tcgtgagcttacctcagttggttgggacaatgcataaaatat 23316387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 28150788 - 28150743
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||||  | ||||||| ||||||||    
T  28150788 gtcctcgtaagcttagctcagttggtacggacaatgcgtaaaatat 28150743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 33223862 - 33223907
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||||    
T  33223862 gtcctcgtgagcttagctcagttggtagaaacaatgcataatatat 33223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 34442510 - 34442469
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  34442510 tcgtgagcttagctcagttagttgggacaatgcataaaatat 34442469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 41030163 - 41030204
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||| |||| |||||| ||||||||||    
T  41030163 tcgtaagcttagctcagttagttgaaacaatacataaaatat 41030204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 44579630 - 44579675
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  44579630 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 44579675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 47943292 - 47943337
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  47943292 gtcctcgtgagcttaactcagttggttgggacagtgcataaaatat 47943337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 48531272 - 48531317
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||||| | ||| ||||||||||    
T  48531272 gtcctcgtgagcttagctcagttggttgggataatacataaaatat 48531317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 279; Significance: 1e-156; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 503 - 857
Target Start/End: Original strand, 629 - 983
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  629 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagagattatatgttaaagtt 728  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 701  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  729 gttttatgtcatgatttcaagtaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaaaattattgtgtctgagtggatagaaat 828  T
Q  702 gaaaagagtgaaagtgtacttkgacaatnnnnnnnttaaatagagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaa 801  Q
    ||||||| ||||||||||||| ||||||       ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  829 gaaaagaatgaaagtgtactt-gacaataaaaaaattaaataaagatttaaggtaaaaacttagattttaccttgtaggcctatattttaaaggtaaaac 927  T
Q  802 attcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattctatc 857  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  928 attcaaaattaccaatagcatatgttctatcctaaaaagttagcatatattctatc 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 377 - 448
Target Start/End: Original strand, 503 - 574
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttggt 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  503 actagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttggt 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 955 - 1020
Target Start/End: Original strand, 1099 - 1168
Alignment:
Q  955 cacaactcaaaccctaaaac---ttaaatttttaaatcataaaatccttctaccc-atctgaactctgca 1020  Q
    |||||||||||||||||||    | ||| |||||||||||||||||||||||||| ||||||||||||||    
T  1099 cacaactcaaaccctaaaaacattaaaaattttaaatcataaaatccttctacccaatctgaactctgca 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 503 - 853
Target Start/End: Complemental strand, 43946381 - 43946032
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  |||||| ||    
T  43946381 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattaaagattat--gttaaagtt 43946284  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaagattaatgtgtctgagtggatagaaat 701  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  43946283 gttttatgtcatgatttcaagcaaaacgtgatttacagaccgcctatctaaagagacactaaccatatttaaagattaaagtgtccgagtggatagaaat 43946184  T
Q  702 gaaaagagtgaaagtgtacttkgacaat-nnnnnnnttaaatagagatttaaggtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaa 800  Q
    ||||||| ||||||||||||| ||||||        ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43946183 gaaaagaatgaaagtgtactt-gacaataaaaaaaattaaataaagatttaaggtaaaaacttggattttaccttgtaggcctgtattttaaaggtaaaa 43946085  T
Q  801 aattcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattc 853  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43946084 aattcaaaattaccaatagcatatgttccatcctaaaaagttagcatatattc 43946032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 377 - 449
Target Start/End: Complemental strand, 43946505 - 43946433
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttggtc 449  Q
    |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  43946505 actagggagacaactcgtgcgttgcacgggtttgactaaattttttaacataaatgaaaagaaaatgttggtc 43946433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 523 - 596
Target Start/End: Original strand, 50784347 - 50784420
Alignment:
Q  523 aaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgtt 596  Q
    |||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  50784347 aaaagcacatttgtatactattagatgtaaatttgccgtgattttaagtagttaagaattagagattatatgtt 50784420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 23154591 - 23154633
Alignment:
Q  149 ctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  23154591 ctcgtgagcttagctcagttggttgaaacaatgcataaaatat 23154633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 241451 - 241406
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||    
T  241451 gtcctcgtaagcttagctcggttggtatgaacaatgcataaaatat 241406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 9913893 - 9913938
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||    
T  9913893 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 9913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 26392685 - 26392644
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaatt 418  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  26392685 actagggatacaacccgtgcgttgcacgggtttgattaaatt 26392644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 28031818 - 28031851
Alignment:
Q  158 ttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||||||||||||    
T  28031818 ttagctcagttggttggaacaatgcataaaatat 28031851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 35287574 - 35287529
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||    
T  35287574 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 35287529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 980 - 1020
Target Start/End: Complemental strand, 43945897 - 43945856
Alignment:
Q  980 tttttaaatcataaaatccttctaccc-atctgaactctgca 1020  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  43945897 tttttaaatcataaaatccttctacccaatctgaactctgca 43945856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 46122202 - 46122243
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaatt 418  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  46122202 actagggatacaacccgtgcgttgcacgggtttgattaaatt 46122243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 34303486 - 34303526
Alignment:
Q  151 cgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  34303486 cgtaagcttaactcagttggttgggacaatgcataaaatat 34303526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 9946419 - 9946466
Alignment:
Q  144 aggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||| |||||||||||||||||  | ||||||||||||||||    
T  9946419 aggtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 9946466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 4916148 - 4916194
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| | |||||||||||||||| ||||||||||||| ||||    
T  4916148 ggtcctcgtgaacttagctcagttggtttgaacaatgcataatatat 4916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 20799462 - 20799416
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| ||||||||||||||||| || ||||||||||| ||||    
T  20799462 ggtcctcgtgagcttagctcagttggtagggacaatgcataatatat 20799416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 24378419 - 24378373
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| || ||||||||||||||||||| |||| |||||||||    
T  24378419 ggtcctcgtgagtttagctcagttggttggaataatgaataaaatat 24378373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 27594320 - 27594366
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| | ||||||||||||||||||||||||  |||||||||    
T  27594320 ggtcctcgtgaacttagctcagttggttggaacaatatataaaatat 27594366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 37725789 - 37725743
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  37725789 ggtcctcgtgagcttagctcagtttgttgggacaatgtataaaatat 37725743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 10303578 - 10303533
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  10303578 gtcctcgtgagcttagctcagttggtaaggacaatgcataaaatat 10303533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 36061397 - 36061442
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| || |||||||||||||||||||  ||||||||||||||||    
T  36061397 gtccttgtgagcttagctcagttggttgagacaatgcataaaatat 36061442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 39606633 - 39606589
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||    
T  39606633 gtcctcgtgagcttagctcagttggtt-gaacaatgtataaaatat 39606589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 50362206 - 50362161
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  50362206 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 50362161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 54859776 - 54859731
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||| ||||||| ||||||||||||| ||||    
T  54859776 gtcctcgtgagcttagctcggttggtttgaacaatgcataatatat 54859731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 6e-98; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 503 - 722
Target Start/End: Complemental strand, 12834080 - 12833857
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||    
T  12834080 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatctgccttgattttaagtagttaagaattagagattatatgttaaagtt 12833981  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaa---gattaatgtgtctgagtggataga 698  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||| |||||||||||||||||    
T  12833980 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagaaacactaaccatatttaaagttgattaacgtgtctgagtggataga 12833881  T
Q  699 aatgaaaagagtgaaagtgtactt 722  Q
    |||||||||| |||||||||||||    
T  12833880 aatgaaaagaatgaaagtgtactt 12833857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 503 - 722
Target Start/End: Complemental strand, 12866058 - 12865835
Alignment:
Q  503 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatttgccttgattttaagtagttaagaattagaaattatatgttaaa-tt 601  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||    
T  12866058 ggagttgggtttgatgaagcaaaagcgcatttgcatgctattagatgtaaatctgccttgattttaagtagttaagaattagagattatatgttaaattt 12865959  T
Q  602 gttttatgtcatgatttcaagcaaaacgtgatttacaggccgcctatctaaagagacactaaccatatttaaa---gattaatgtgtctgagtggataga 698  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||| |||||||||||||||||    
T  12865958 gttttatgtcatgatttcaaacaaaacgtgatttacaggccgcctatctaaagaaacactaaccatatttaaagttgattaacgtgtctgagtggataga 12865859  T
Q  699 aatgaaaagagtgaaagtgtactt 722  Q
    |||||||||| |||||||||||||    
T  12865858 aatgaaaagaatgaaagtgtactt 12865835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 754 - 857
Target Start/End: Complemental strand, 12831340 - 12831237
Alignment:
Q  754 gtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaaattcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattc 853  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  12831340 gtaaaaacttggattttaccttgtaggcctatattgtaaaggtaaaaaattcaaaattaccaatagcatatgttccatcctaaaaaaatagcatatattc 12831241  T
Q  854 tatc 857  Q
    ||||    
T  12831240 tatc 12831237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 754 - 857
Target Start/End: Complemental strand, 12863319 - 12863216
Alignment:
Q  754 gtaaaaacttggattttaccttgtaggcctatattttaaaggtaaaaaattcaaatttaccaatagcatatgttccatcctaaaaagttagcatatattc 853  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  12863319 gtaaaaacttggattttaccttgtaggcctatattgtaaaggtaaaaaattcaaaattaccaatagcatatgttccatcctaaaaaaatagcatatattc 12863220  T
Q  854 tatc 857  Q
    ||||    
T  12863219 tatc 12863216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 12834206 - 12834137
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttg 446  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12834206 actagggagacaacccgtgtgttgcacgggtttgattaaattttttaacataaatgaaaagaaaatgttg 12834137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 12866184 - 12866115
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaattttgtaacataaatgaaaagaaaatgttg 446  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12866184 actagggagacaacccgtgtgttgcacgggtttgattaaattttttaacataaatgaaaagaaaatgttg 12866115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 34191426 - 34191472
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  34191426 ggtcctcgtgagcttagctcagttggttgggacaatgcataaaatat 34191472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 3630649 - 3630698
Alignment:
Q  142 ttaggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  3630649 ttaggtcctcgtgagcttagctcagttggttggaacaatatataaaatat 3630698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 5551348 - 5551303
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  5551348 gtcctcatgagcttagctcagttggttggaacaatgcataaaatat 5551303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 35270748 - 35270703
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  35270748 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatat 35270703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 11397119 - 11397078
Alignment:
Q  377 actagggagacaacccgtgcgttgcacgggtttgcttaaatt 418  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  11397119 actagggatacaacccgtgcgttgcacgggtttgattaaatt 11397078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 27721742 - 27721697
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||    
T  27721742 gtcctcgtgagcttagctcagttggtaggaacaatgcataatatat 27721697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 22619869 - 22619913
Alignment:
Q  147 tcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||    
T  22619869 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 22619913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 5485178 - 5485225
Alignment:
Q  144 aggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||| ||||||||||||||||| || ||||||||||| ||||    
T  5485178 aggtcctcgtgagcttagctcagttggtagggacaatgcataatatat 5485225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 6489001 - 6489046
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 6489046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 7336382 - 7336341
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaa 187  Q
    |||||||| ||||||||||||||| | |||||||||||||||    
T  7336382 gtcctcgtgagcttagctcagttgataggaacaatgcataaa 7336341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 8410512 - 8410467
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||| ||  ||||||||||||||||||    
T  8410512 gtcctcgtgagcttagctcagttagtgtgaacaatgcataaaatat 8410467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 8543570 - 8543615
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||| | ||||||||||||||||    
T  8543570 gtcctcgtgagcttaactcagttggtttggacaatgcataaaatat 8543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 10359667 - 10359618
Alignment:
Q  143 taggtcctcgtaagcttagctcagttggttggaacaatgcataaaatatt 192  Q
    ||||||||||| | |||||||||||||||  ||||||||||| |||||||    
T  10359667 taggtcctcgtgaacttagctcagttggtatgaacaatgcattaaatatt 10359618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 15889405 - 15889450
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 15889450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 28207126 - 28207171
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  28207126 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 28207171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 34436845 - 34436890
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  34436845 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 34436890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 42473888 - 42473933
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||| ||| |||||||||||||||| ||||    
T  42473888 gtcctcgtgagcttagctcaattgattggaacaatgcataatatat 42473933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 42505866 - 42505911
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||||  | ||||||||||| ||||    
T  42505866 gtcctcgtaagcttagctcagttggtatggacaatgcataatatat 42505911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 5503833 - 5503787
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  5503833 ggtcctcgtaagcttagctcagttggtagaaacaatgcataaaatat 5503787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 47835801 - 47835846
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||    
T  47835801 gtcctcgtaaatttagctcagttggttggaacaatgcataaaatat 47835846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 23203325 - 23203361
Alignment:
Q  155 agcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||||||||||||||||||||    
T  23203325 agcttagctcagttggttggaacaatgcataaaatat 23203361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 13590104 - 13590149
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| | ||||||||||||||||    
T  13590104 gtcctcgtgagcttagctcagttggtttggacaatgcataaaatat 13590149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 13673539 - 13673584
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||    
T  13673539 gtcctcgtgagcttagctcggttggtttgaacaatgcataaaatat 13673584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 15668492 - 15668537
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||    
T  15668492 gtcctcgtgatcttaactcagttggttggaacaatgcataaaatat 15668537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 20481094 - 20481135
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaa 187  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  20481094 gtcctcgtgagcttagctcagttggtttgaacaatgcataaa 20481135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 47340790 - 47340826
Alignment:
Q  155 agcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||| ||||||||||||||||    
T  47340790 agcttagctcagttggttgggacaatgcataaaatat 47340826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 50040351 - 50040395
Alignment:
Q  147 tcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||    
T  50040351 tcctcgtgaacttagctcagttggttgggacaatgcataaaatat 50040395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 21400092 - 21400045
Alignment:
Q  144 aggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||| ||||||||||||||||| || ||||||||||| ||||    
T  21400092 aggtcctcgtgagcttagctcagttggtagggacaatgcataatatat 21400045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 17139584 - 17139538
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatatt 192  Q
    |||||||| ||||||||||||||||| || ||||||||||| |||||    
T  17139584 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatt 17139538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 23524817 - 23524863
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||| || |||||| |||||||| |||||||||||||||||||||    
T  23524817 ggtccttgtgagcttaactcagttgattggaacaatgcataaaatat 23524863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 26998601 - 26998643
Alignment:
Q  149 ctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||    
T  26998601 ctcgtgagcttagctcagctggttggaacaatgcataagatat 26998643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 39452454 - 39452496
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaa 188  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  39452454 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaa 39452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 44243866 - 44243912
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| || |||||||||||||| |||||||||||||| ||||    
T  44243866 ggtcctcgtgagtttagctcagttggtaggaacaatgcataatatat 44243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 48682001 - 48681955
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||||||||||||||  ||||||||||||| ||||    
T  48682001 ggtcctcgtgagcttagctcagttggtatgaacaatgcataatatat 48681955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 11701960 - 11702005
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||  |||||||||||| ||||||||||||||||    
T  11701960 gtcctcgtgagcttaattcagttggttgggacaatgcataaaatat 11702005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 29739331 - 29739376
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  29739331 gtcctcgttagcttagctcagttggtaaggacaatgcataaaatat 29739376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 32007664 - 32007619
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  32007664 gtcctcgtgagcttaactcagttcgttgggacaatgcataaaatat 32007619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 37045213 - 37045168
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||| |||||||||||| |||||||||||||| ||||    
T  37045213 gtcctcgtgagctcagctcagttggtaggaacaatgcataatatat 37045168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 41763222 - 41763177
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || | ||||||||||||||    
T  41763222 gtcctcgtgagcttagctcagttggtagggataatgcataaaatat 41763177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 44860950 - 44860905
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||    
T  44860950 gtcctcgtgaacttagctcagttggtttggacaatgcataaaatat 44860905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 118813 - 118858
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  118813 gtcctcgtgagcttagctcagttggtttgaacaatgcataaaatat 118858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000006; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 24023482 - 24023437
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||    
T  24023482 gtcctcgtgagcttagctcagttagttggaacaatgcataaaatat 24023437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 2508610 - 2508644
Alignment:
Q  157 cttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||||||||||||||||||    
T  2508610 cttagctcagttggttggaacaatgcataaaatat 2508644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 18638105 - 18638139
Alignment:
Q  157 cttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||||||||||||||||||    
T  18638105 cttagctcagttggttggaacaatgcataaaatat 18638139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 8020304 - 8020349
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||    
T  8020304 gtcctcgtaagcttagctcagttggtaggaacaacgcataatatat 8020349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 8137929 - 8137974
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||    
T  8137929 gtcctcgtaagcttagctcagttggtatggacaatgcataaaatat 8137974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 8461899 - 8461858
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| |||||||||||||||||||| ||||||||||||||||    
T  8461899 tcgtgagcttagctcagttggttgggacaatgcataaaatat 8461858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 16340320 - 16340365
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||    
T  16340320 gtcctcgtgagcttagttcagttggttggaacaacgcataaaatat 16340365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 33445564 - 33445609
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||    
T  33445564 gtcctcgtgagcttagctcagttggtaggaacaatgcataatatat 33445609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 10225320 - 10225364
Alignment:
Q  147 tcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||    
T  10225320 tcctcgtaaacttagctcagttggttgggacaatgcatagaatat 10225364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 43330313 - 43330277
Alignment:
Q  155 agcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||||||||||||||||||| ||||||||||    
T  43330313 agcttagctcagttggttggaacaatacataaaatat 43330277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 8544667 - 8544621
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| ||||||||||||| |||||||| |||| |||||||||    
T  8544667 ggtcctcgtgagcttagctcagtcggttggaataatgtataaaatat 8544621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 11708979 - 11709025
Alignment:
Q  145 ggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| ||||||||||||||||| || ||||||||||| ||||    
T  11708979 ggtcctcgtgagcttagctcagttggtagggacaatgcataatatat 11709025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 4623667 - 4623622
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||  |||||||||||||||||||| ||||| ||||||||||    
T  4623667 gtcctcgggagcttagctcagttggttggtacaatacataaaatat 4623622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 14975930 - 14975885
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  ||||| ||||||||||||    
T  14975930 gtcctcgtgagcttagctcagttggtatgaacagtgcataaaatat 14975885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 17693267 - 17693312
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||| ||||||||||||| |||| |||||||||||    
T  17693267 gtcctcgtgagcttaactcagttggttgggacaacgcataaaatat 17693312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 26799182 - 26799223
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||| |||||||||| || ||||||||||||||||    
T  26799182 tcgtaagcttaactcagttggtagggacaatgcataaaatat 26799223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 33105385 - 33105430
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||| ||||| ||||||||||||| ||||    
T  33105385 gtcctcgtgagcttagctcagctggtttgaacaatgcataatatat 33105430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 39821878 - 39821923
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  39821878 gtcctcgtgagcttagctcagttggtagggacaatgcataatatat 39821923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 40919422 - 40919381
Alignment:
Q  150 tcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||| |||||||||||||| |||||||||||||| ||||    
T  40919422 tcgtaagtttagctcagttggtaggaacaatgcataatatat 40919381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000004; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 37133044 - 37133002
Alignment:
Q  149 ctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  37133044 ctcgtgagcttagctcagttggttgggacaatgcataaaatat 37133002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 7201501 - 7201546
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||| ||||||||||||| ||||    
T  7201501 gtcctcgtgagcttagctcagttggtttgaacaatgcataatatat 7201546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 9842269 - 9842224
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||    
T  9842269 gtcctcgtgagcttagctcagttggtagggacaatgcataaaatat 9842224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 17736787 - 17736832
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||    
T  17736787 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 17736832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 18881228 - 18881183
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||    
T  18881228 gtcctcgtaagtttagctcagttggttgggataatgcataaaatat 18881183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 21929465 - 21929509
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  21929465 gtcctcgtgagcttagctcagttggttgg-acaatgcataaaatat 21929509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 29133551 - 29133506
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||    
T  29133551 gtcctcgtaagtttagctcagttggtatgaacaatgcataaaatat 29133506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 43424653 - 43424698
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||    
T  43424653 gtcctcatgagcttagctcagttgattggaacaatgcataaaatat 43424698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 4227037 - 4226993
Alignment:
Q  147 tcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||    
T  4227037 tcctcgtgagcttaactcaattggttggaacaatgcataaaatat 4226993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 17328073 - 17328029
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaata 190  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||    
T  17328073 gtcctcgtgagcttagctcagtcggttgggacaatgcataaaata 17328029  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 10109711 - 10109668
Alignment:
Q  148 cctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||| |||||||||||||||||| | ||||||||||||||||    
T  10109711 cctcgtgagcttagctcagttggtttggacaatgcataaaatat 10109668  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 346196 - 346146
Alignment:
Q  141 cttaggtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||||| ||||    
T  346196 cttatgtcctcgtgagcttagctcagttggtttgaataatgcataatatat 346146  T

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Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 32887356 - 32887398
Alignment:
Q  149 ctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||    
T  32887356 ctcgtgagcttagctcagttgattggaacaatacataaaatat 32887398  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 6765604 - 6765649
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||| ||||||||||||||||||||  | ||||||||||||||||    
T  6765604 gtccttgtaagcttagctcagttggtatggacaatgcataaaatat 6765649  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 17413399 - 17413354
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| || ||| ||||||||||||||| ||||||||||||||    
T  17413399 gtcctcgtgagtttaactcagttggttggaataatgcataaaatat 17413354  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 22709079 - 22709124
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||||| ||||||| |||||||||  ||||||||||||||||    
T  22709079 gtcctcgtaaacttagcttagttggttgagacaatgcataaaatat 22709124  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 30019917 - 30019962
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||  ||||||| ||||||||||||||||    
T  30019917 gtcctcgtgagcttagctcaactggttgggacaatgcataaaatat 30019962  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 30040778 - 30040733
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||  ||||||| ||||||||||||||||    
T  30040778 gtcctcgtgagcttagctcaactggttgggacaatgcataaaatat 30040733  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 30110256 - 30110211
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||  ||||||| ||||||||||||||||    
T  30110256 gtcctcgtgagcttagctcaactggttgggacaatgcataaaatat 30110211  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 30234916 - 30234871
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||  ||||||| ||||||||||||||||    
T  30234916 gtcctcgtgagcttagctcaactggttgggacaatgcataaaatat 30234871  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 31582180 - 31582225
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||| ||| |||||||||||||||||| |||||||||||| |||||    
T  31582180 gtccacgtgagcttagctcagttggtttgaacaatgcatagaatat 31582225  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 40365473 - 40365428
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  40365473 gtcctcgtgagcttagctcagttggtatgtacaatgcataaaatat 40365428  T

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Target: scaffold0460 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 1247 - 1292
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||    
T  1247 gtcctcgtgagcttagcttagttggtttgaacaatgcataaaatat 1292  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 171153 - 171198
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||    
T  171153 gtcctcgtgagcttagctcggttggtttgaacaatgcataaaatat 171198  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 3636 - 3598
Alignment:
Q  153 taagcttagctcagttggttggaacaatgcataaaatat 191  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  3636 taagcttagttcagttggttgggacaatgcataaaatat 3598  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 5419 - 5464
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  ||||||||||||| ||||    
T  5419 gtcctcgtgagcttagctcagttggtaagaacaatgcataatatat 5464  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 185257 - 185302
Alignment:
Q  146 gtcctcgtaagcttagctcagttggttggaacaatgcataaaatat 191  Q
    |||||||| |||||||||||||||||  | ||||||||||||||||    
T  185257 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 185302  T

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