View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5523-Insertion-13 (Length: 330)
Name: NF5523-Insertion-13
Description: NF5523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5523-Insertion-13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 8 - 330
Target Start/End: Original strand, 47039273 - 47039594
Alignment:
| Q |
8 |
agagccacttgagattgcaacaacttacaagtgagttaacaacaaaacggtttccatggcttcctgttaattgtctcccagagaaatttggattgaacaa |
107 |
Q |
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| T |
47039273 |
agagccacttgagattgcaacaacttacaagtgagttaacaacaaaacggtttccatggcttcctgttaattgtctcccagagaaatttggattgaacaa |
47039372 |
T |
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| Q |
108 |
aactcctccactcaatgaatacttgaaaccactcaagtatccaatgttttccctccctgaaacaaaaaacaacatcaaaagcccagaattaatatcaaac |
207 |
Q |
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| T |
47039373 |
aactcctccactcaatgaatacttgaaaccactcaagtatccaatgttttccctccctgaaacaaaaaacaacatcaaaagcccagaattaatatcaaac |
47039472 |
T |
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| Q |
208 |
taaagtgtatgaaatctttgcaaaaatataaacttttttgacttaaatctacacagaacacgtatgaatggaagttacatgcaaatttgcttactttggg |
307 |
Q |
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| T |
47039473 |
taaagtgtatgaaatctttgcaaaaatataaacttttttgacttaaatctacacagaacacgtatgaatggaagttacatgcaaatttgcttactttggg |
47039572 |
T |
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| Q |
308 |
agggaagaaaacggtgtacggac |
330 |
Q |
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| T |
47039573 |
agggaag-aaacggtgtacggac |
47039594 |
T |
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