View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5523-Insertion-4 (Length: 761)
Name: NF5523-Insertion-4
Description: NF5523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5523-Insertion-4 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 387; Significance: 0; HSPs: 26)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 8 - 423
Target Start/End: Complemental strand, 10217059 - 10216648
Alignment:
| Q |
8 |
taaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10217059 |
taaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttg |
10216960 |
T |
|
| Q |
108 |
ttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagatttt |
207 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10216959 |
ttctagtacaaactacaaaggtcaagaatttaaagctctagttttttattacatgaaaaatggaagct----tagaacaatggttgcatcctgagatttt |
10216864 |
T |
|
| Q |
208 |
aaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaa |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10216863 |
aaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttcggcattacattatctgcatcaagaatgtgagcaa |
10216764 |
T |
|
| Q |
308 |
ttgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaacca |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216763 |
ttgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaacca |
10216664 |
T |
|
| Q |
408 |
ttggtggtacctctca |
423 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
10216663 |
ttggtggtacctctca |
10216648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 10 - 565
Target Start/End: Complemental strand, 11048965 - 11048419
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
11048965 |
aacctccaaaacaatggagctagcaagagtttcattgttgaatgtaatgcactcaaaaacattagacaccgaaacttagttaaggttttaacctgttgtt |
11048866 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
11048865 |
ctagtacagattacaaaggtgaagaatttaaagcactagtttttgattacatgaaaaatggaagct----tagaacaatggttacatcctgagattttaa |
11048770 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11048769 |
attcagagcatccaaaaacattggaccttggtgataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
11048670 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||||| |||| | |||||||| ||| |
|
|
| T |
11048669 |
gattattcattgtgatctaaagccaagtaatgttcttcttaacgacgacatggttgctcatgtgagtgattttggcattgcaaaacttgtctcagccacc |
11048570 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatg-------ttctaaatgcttgcatcttcc |
502 |
Q |
| |
|
| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||||||| ||||||| |
|
|
| T |
11048569 |
gatgg------------caatactagtacaattggaataaaaggaaccattggctacgctcctccaggtctgttctaatttctaaatgcttaaatcttcc |
11048482 |
T |
|
| Q |
503 |
attgtttctttgaattctcctatgttttggtgaatacttaatatattaccattgacatagtat |
565 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11048481 |
actgtttctttgaattctcctatgttttggtgaatacttaacatattaccattgacatagtat |
11048419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 10 - 551
Target Start/End: Original strand, 10604653 - 10605190
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||| || |||||||| || | |||| | |||||||||||||||| |
|
|
| T |
10604653 |
aacctccaaaagaagggagcacacaagaatttcattgttgaatgtaatgcactcaaaactataagacaccggaatttagttcaagttttaacatgttgtt |
10604752 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10604753 |
ctagtacagattacaaaggtcaagaatttaaagctctagtttttgattacatgaaaaatggaagct----tagaacaatggttgcatcctgagattttaa |
10604848 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| |||||| ||||| ||| |||||||||||| | || || ||||||||| | ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
10604849 |
atgcagagcctccaacaacgttggaccttggtaaaagatttaacatcatttttgatgttgcttctgcattgcattatcttcatcaagaatgtgagcaatt |
10604948 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| ||||||||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||||| | | ||||| ||||| |
|
|
| T |
10604949 |
agtcattcattgtgatctaaagccaagcaatgtcctacttgatgatgatatggttgctcatgtgagtgattttggcatagcaagactggtctcgtccatt |
10605048 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgttt |
509 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||| |||| |||||| |||||| |
|
|
| T |
10605049 |
ggtggtacctctcatataaatactagtacaattgggataaaaggaactgttggatatgctcctccaggtatgttctaaattcttgaatcttcagttgttt |
10605148 |
T |
|
| Q |
510 |
ctttgaattctcctatgttttggtgaatacttaatatattac |
551 |
Q |
| |
|
|||| |||||| || | || ||||| ||||||||||| |||| |
|
|
| T |
10605149 |
ctttcaattctactctattctggtgcatacttaatattttac |
10605190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 577
Target Start/End: Original strand, 10611611 - 10612174
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
10611611 |
aacctccaaaacaatggagctcacaagagtttcattgttgaatgtaatgcactaaaatttattagacaccgaaatttagttaagattttaacatgttgtt |
10611710 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||||||||| || |||||| |
|
|
| T |
10611711 |
ctagtacagattacaaaggtcaagaatttaaagccctagtttttgattacatgaaaaatggaagct----tagaacaatggttgcatcccaaggttttaa |
10611806 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| ||||||| || |||||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
10611807 |
atgaagagcatacagcaacattggacctcagtcatagattaaacatcattatggatgttggttctgcattacattatcttcataatgaatgtgagcaatt |
10611906 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| | ||||||||||| |||||||||||||||| || || ||||||| |||||||| ||||||||||||||||||||||||| | ||||||| ||||| |
|
|
| T |
10611907 |
ggtccttcattgtgatataaagccaagcaatgtcctacttgatgatgatatggttgcacatgtgagtgattttggcatagcaagacttgtctcggccatt |
10612006 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgttt |
509 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||| ||||| || |||||||| |||||||||||||||||||||| | || | ||| || |||| |
|
|
| T |
10612007 |
ggtggttcctctcataagaatactaagacaattggaattaaagggactgttggctatgctcctccaggtatgttctaaattcatgaacctttgatcgttt |
10612106 |
T |
|
| Q |
510 |
ctttgaattctcctatgttttggtgaatacttaatatattaccattgacatagtattaatagcttttg |
577 |
Q |
| |
|
||||||||| ||||||||||| ||| | ||||||| | |||| | || ||| |||||||||||||||| |
|
|
| T |
10612107 |
ctttgaattttcctatgtttttgtgtaaacttaatgttttactagtggcattgtattaatagcttttg |
10612174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 10 - 530
Target Start/End: Complemental strand, 10741007 - 10740487
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| | ||||||| |||| |||||||||| |
|
|
| T |
10741007 |
aacctcaaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactcaaaaatattagacaccgaaatttagttaagattttgacatgttgtt |
10740908 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||| || ||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
10740907 |
ctagtacagattacaaaggtcaaacttttaaagctcttgtttttgattacatgaaaaatggaagct----tagaacaatggttgcatcttgagattttaa |
10740812 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| |||| ||||||| ||||||||||||||||||||| ||||||||||| | |||||| || |||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
10740811 |
atgcagatcatccaagaacattggaccttggtcatagattaaacatcatgaacgatgtcgccactgcattacattatcttcaccaagaatgtgaacaatt |
10740712 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| | |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
10740711 |
ggtccttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcagccatt |
10740612 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccagg----tatgttctaaatgcttgcatcttccatt |
505 |
Q |
| |
|
| | ||||||||| ||| | |||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| | || || | ||||| |
|
|
| T |
10740611 |
gacgatacctctcacaaggaaactagtacaattggaataaaaggaactgttggctatgctcctccaggtatatatgttctaaattcatgaatatcccatt |
10740512 |
T |
|
| Q |
506 |
gtttctttgaattctcctatgtttt |
530 |
Q |
| |
|
|||||||| ||| ||| |||||||| |
|
|
| T |
10740511 |
gtttctttaaatcctcgtatgtttt |
10740487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 8 - 577
Target Start/End: Complemental strand, 10747325 - 10746768
Alignment:
| Q |
8 |
taaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttg |
107 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||| |||||||||||||||| |||||| ||||||||||||||||| | ||||||| ||||||| ||||| |
|
|
| T |
10747325 |
taaaccttcaaaagaagggagctcacaagagtttcattgttgaatgtaatgtactcaagaacattagacaccgaaatttagttaagattttaacgtgttg |
10747226 |
T |
|
| Q |
108 |
ttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagatttt |
207 |
Q |
| |
|
|||||||| ||| ||||||| ||| || |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
10747225 |
ttctagtatagattacaaagttcaggagtttaaagctctagttttttattacataaaaaatggaagct----tagaacaatggttgcatcctgagttttt |
10747130 |
T |
|
| Q |
208 |
aaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaa |
307 |
Q |
| |
|
|||| ||||||||||||||| || |||||||| || || |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||| |
|
|
| T |
10747129 |
aaatgaagagcatccaaaaacgttagaccttggccacagattaaacatcattatcgatgttgcttcaacattacattatcttcaccaagaatgtgagcaa |
10747030 |
T |
|
| Q |
308 |
ttgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaacca |
407 |
Q |
| |
|
|| | ||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||| |
|
|
| T |
10747029 |
ttagtcattcactgtgatctcaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgactgattttggcatagcaaaacttgtctcagcca |
10746930 |
T |
|
| Q |
408 |
ttggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccagg----tatgttctaaatgcttgcatcttcca |
503 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||| ||||||| |
|
|
| T |
10746929 |
ctagtgg------------caatactagtacaattggaataaaaggaactgttggctatgctcctccaggtatatatgttctaaattcttgagtcttcca |
10746842 |
T |
|
| Q |
504 |
ttgtttctttgaattctcctatgttttggtgaatacttaatatattaccattgacatagtattaatagcttttg |
577 |
Q |
| |
|
|||||||||||||| ||||||||||||||| | | ||||||| ||| | ||||| |||||||||||||||| |
|
|
| T |
10746841 |
ttgtttctttgaatactcctatgttttggtttagatttaatattatactagggacatcgtattaatagcttttg |
10746768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 502
Target Start/End: Original strand, 10564928 - 10565416
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||| ||||||| |
|
|
| T |
10564928 |
aacctccaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactcaaaaatattcgacaccgaaatttagttaaggttttaacctgttgtt |
10565027 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||| || ||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
10565028 |
caagtacagattacaaaggtcaagaatttaaagctctggtttttgagtacatgaaaaatggaagct----tagatcaatggttgcatcctgagattttaa |
10565123 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| |||| | |||| |||||||||| ||| |||||| ||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||| |||| |
|
|
| T |
10565124 |
atgcagaacccccaacaacattggactttgctcatagattatacattattatcgatgttgcttctgcattacattatcttcatagagaatgtgaagaatt |
10565223 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| | ||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||| | | |||||| | ||| |
|
|
| T |
10565224 |
ggtcattcattgtgatctaaagccaagcaatatccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagactcgtctcagctatt |
10565323 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttcc |
502 |
Q |
| |
|
|| |||||||| |||| ||||| |||||||||| | | |||||||| || ||||| ||||||| |||||||| |||||||||| ||||||| |
|
|
| T |
10565324 |
ggcagtacctcttataaaaatacaagtacaattgaagttaaaggaacagtaggctattctcctcctggtatgttttaaatgcttgaatcttcc |
10565416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 10 - 531
Target Start/End: Original strand, 10580905 - 10581414
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||| |||||| |||||||||||| |
|
|
| T |
10580905 |
aacctccaaaagaaaggagctcacaagagttttattgttgaatgtaatgcactcaaaaatattagacaccaaaatttagtcaaggttctaacatgttgtt |
10581004 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||||||| | |||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
10581005 |
ctagtacaaattacaaaggccaagaatttaaagctttagttttttattacatgaaaaatgga----agcttagaacaatggttgcatcctcaga-tttaa |
10581099 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
| |||| | || || ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
10581100 |
gtgcagaacctctaacaacattgaaccttggtcatagattaaacatcattatggatgttgcttctgcattacattatcttcatcgagaatgtgagcaatt |
10581199 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| | ||| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||| | |||||||| ||||| |
|
|
| T |
10581200 |
ggtccttcgttgtgatctaaagccaagca---cacttcttgatgatgacatgg----tcatgtgagtgattttggcacagcaagacttgtctcagccatt |
10581292 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgttt |
509 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||||| ||||| ||| ||||||| |||| |
|
|
| T |
10581293 |
tgtggtaccactcataagaatactagtacaactggaataaaaggaacaattggctatgctcctctgggtatgttttaaattattgatacttccatcgttt |
10581392 |
T |
|
| Q |
510 |
ctttgaattctcctatgttttg |
531 |
Q |
| |
|
||||||| || ||||||||| |
|
|
| T |
10581393 |
atttgaatcctaatatgttttg |
10581414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 10 - 480
Target Start/End: Complemental strand, 10717248 - 10716782
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||| |||||||||||||||||||| ||||| || ||||||||||| ||| ||| | ||||||||||||| |
|
|
| T |
10717248 |
aacctcaaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactaaaaaatatcagacaccgaaatctagtgaagatattaacatgttgtt |
10717149 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
10717148 |
ctagtacagattacaaaggtcaaacttttaaagctctagtttttgattacatgaaaaatggaagct----tagaacaatggttgcatcttgagattttaa |
10717053 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| |||| ||||||| ||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
10717052 |
atgcagatcatccaagaacattggaccttggtcatagattaaacatcatgatcgatgtcgccactgcattacattatcttcaccaagaatgtgaacaatt |
10716953 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
|| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||| |
|
|
| T |
10716952 |
aatcattcattgtgatcttaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgactgattttggcatagcaaaacttgtctcggatatt |
10716853 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtat |
480 |
Q |
| |
|
|| ||||||| ||||| |||| |||||| ||||||||||||| | | ||||||| |||| |||||||| |
|
|
| T |
10716852 |
ggcattacctctgataaggataccagtacagttggaataaaagggagcattggctatgctcccccaggtat |
10716782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 10 - 530
Target Start/End: Complemental strand, 10763441 - 10762921
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||| ||| |||||| || | ||||||| ||||||||||||||| |
|
|
| T |
10763441 |
aacctccaaaacaatggagctcacaagagtttcattgttgaatgtaatgcactaaaaaatattcaacaccggaatttagttaagattttaacatgttgtt |
10763342 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
||||||| || || ||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||| |||| |||| ||| || ||||| |
|
|
| T |
10763341 |
ctagtactgattataaaggtcaagaatttaaagctctggtttttgattacatgaaaaatggaagct----tagaacgatggctgcaccctaggaatttaa |
10763246 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| ||||| ||||| ||||||||| |||| ||| || | || |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
10763245 |
atgcagagactccaacaacattggatcttgatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaatt |
10763146 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaa-ccat |
408 |
Q |
| |
|
| | |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| | | || |||| |||| |
|
|
| T |
10763145 |
ggtccttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggaatagcaagactagt-tcaagccat |
10763047 |
T |
|
| Q |
409 |
tggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccagg----tatgttctaaatgcttgcatcttccat |
504 |
Q |
| |
|
|| | ||||||||| |||| | |||||||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||| |||| ||| |||| |
|
|
| T |
10763046 |
tgcttgtacctctcttaaggaaactagtacaactggaataaaaggaactgttggctatgctcctccaggtatatatgttctgaattcttgagtctcccat |
10762947 |
T |
|
| Q |
505 |
tgtttctttgaattctcctatgtttt |
530 |
Q |
| |
|
| ||||||||||| ||| |||||||| |
|
|
| T |
10762946 |
tatttctttgaatcctcgtatgtttt |
10762921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 578 - 761
Target Start/End: Complemental strand, 10216438 - 10216255
Alignment:
| Q |
578 |
tgttatttatctgcgtatcctgaacccatccttcaccattctatcatcaccatctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagt |
677 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216438 |
tgttatttatctgcttatcctgaacccatccttcaccattctatcatcaccatctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagt |
10216339 |
T |
|
| Q |
678 |
ctgaaagatattaaaggaatggtggctaagggaatatgcatcacaaggtccaggagtttcatacagccagatgtatcaaattgc |
761 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216338 |
ctgaaagatattaaaggaatggtggctaagggaatatgcatcacaaggtccaggagtttcatacagccagatgtatcaaattgc |
10216255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 17 - 479
Target Start/End: Complemental strand, 10588731 - 10588273
Alignment:
| Q |
17 |
aaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtac |
116 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||||||||||||| || ||||||| ||||| | | ||| ||||||||||||||||| |||| |
|
|
| T |
10588731 |
aaaagaagggagctgataagagttttattgccgaatgtaatgcactcaagaatgttagacatcgaaatttggccaagattttaacatgttgttctggtac |
10588632 |
T |
|
| Q |
117 |
agactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcaga |
216 |
Q |
| |
|
|| || ||||||||||||||||||||| |||| ||| ||||||||||||||||||| | ||||||||||| | ||||| || | | |||||||| |
|
|
| T |
10588631 |
tgattataaaggtcaagaatttaaagctttagtttttgattacatgaaaaatggaagtt----tagaacaatggcttcatccatggaatgtgaattcaga |
10588536 |
T |
|
| Q |
217 |
gcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattatt |
316 |
Q |
| |
|
|||||||| ||| |||||||||| |||||| ||||| |||| ||||||| ||||||||||| |||||||||| ||||| ||||||||||| || | || |
|
|
| T |
10588535 |
gcatccaagaacgttggaccttgttcatagattaaatatcactatcgatattgcttctgcactacattatcttcatcatgaatgtgagcaggtggtcctt |
10588436 |
T |
|
| Q |
317 |
cattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggta |
416 |
Q |
| |
|
||||||||| ||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||| | |||||||| |||| | | |
|
|
| T |
10588435 |
cattgtgatataaagccaagcaacgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcagttattgaagaca |
10588336 |
T |
|
| Q |
417 |
cctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggta |
479 |
Q |
| |
|
| |||||| || | ||||||||||||||||| ||||| || |||||||| |||||||||||| |
|
|
| T |
10588335 |
catctcatcaggaaactagtacaattggaattaaagggactgttggctatgctcctccaggta |
10588273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 17 - 482
Target Start/End: Original strand, 10558810 - 10559271
Alignment:
| Q |
17 |
aaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtac |
116 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||| ||||||| ||||||||||||| |
|
|
| T |
10558810 |
aaaagaatggagctcacaagagttttattaccgaatgtaatgcactaaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtat |
10558909 |
T |
|
| Q |
117 |
agactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcaga |
216 |
Q |
| |
|
|| ||||||||||| ||||| ||||||||||| ||| | ||||||||||||||||||| ||||| | ||||||||| | ||| | ||| ||| |
|
|
| T |
10558910 |
tgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagct----tagaaaactggttgcattcaaggatgatgaatgtaga |
10559005 |
T |
|
| Q |
217 |
gcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattatt |
316 |
Q |
| |
|
||| |||| | ||||||| ||| ||| || | || |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| | || |
|
|
| T |
10559006 |
gcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtcctt |
10559105 |
T |
|
| Q |
317 |
cattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggta |
416 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | |||| |||| ||||||||||||||||||||||||||||||| | | |||||| | | |||| |
|
|
| T |
10559106 |
cattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctcatctgcggacggta |
10559205 |
T |
|
| Q |
417 |
cctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgt |
482 |
Q |
| |
|
|||| |||| | ||||| ||||||||||||||||| || |||||||| ||||||||||||||| |
|
|
| T |
10559206 |
tatctcctaaggaaactagcacaattggaataaaagggactgttggctatgctcctccaggtatgt |
10559271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 10 - 480
Target Start/End: Original strand, 7192906 - 7193372
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
||||| |||||||| |||||| ||||||||| |||| ||||||||||||||| ||||| |||||||| ||||| | |||||| |||| |||||||||| |
|
|
| T |
7192906 |
aaccttcaaaagaagggagctcacaagagtttcattgctgaatgtaatgcactaaaaaatattagacatcgaaatttggttaagattttgacatgttgtt |
7193005 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattt-ta |
208 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||| |||| ||| | |||||||| || ||||||| ||||||||||| | |||||| |||| | |
|
|
| T |
7193006 |
ccagtacagattacaaaggtcaagaatttaaagctttagtctttgaatacatgaacaacggaagct----tagaacaatggctacatcct-agatcagtg |
7193100 |
T |
|
| Q |
209 |
aattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaat |
308 |
Q |
| |
|
||| |||| ||| || ||| |||||||||| ||| || || || ||| | | ||| |||| | || ||||||||| || |||| ||||||||||||| |
|
|
| T |
7193101 |
aatgtagagaatcaaagaacgttggaccttgatcaaagattgaatatcgctgttgatattgcctttgtattacattaccttcatcttgaatgtgagcaat |
7193200 |
T |
|
| Q |
309 |
tgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccat |
408 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| | |||||||| || |
|
|
| T |
7193201 |
cgatcattcattgtgatctaaagccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcagttat |
7193300 |
T |
|
| Q |
409 |
tggtggtacctctcat-aagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtat |
480 |
Q |
| |
|
|| | ||||||||| |||| ||||||||||||||||| ||||| || ||||||| ||||||||||||| |
|
|
| T |
7193301 |
tgacgacacctctcatcgagaa-actagtacaattggaattaaagggactattggctatgctcctccaggtat |
7193372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 17 - 392
Target Start/End: Complemental strand, 19606166 - 19605795
Alignment:
| Q |
17 |
aaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtac |
116 |
Q |
| |
|
||||||| |||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||||| | ||||||| ||||||| ||||||||||||| |
|
|
| T |
19606166 |
aaaagaagggagctcacaagagttttattactgaatgtaatgctctcaaaaatattagacatcgaaatttagttaagattttaacttgttgttctagtat |
19606067 |
T |
|
| Q |
117 |
agactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcaga |
216 |
Q |
| |
|
|| ||||||||| |||||| ||||||||||| ||| | ||||||| ||||||| ||||||||||||||||||||||| | || | ||| |||| |
|
|
| T |
19606066 |
tgataacaaaggtctagaattcaaagctctagtttttgagtacatgagaaatgga----agcttagaacaatggttgcatcccgggacaatgaatgcaga |
19605971 |
T |
|
| Q |
217 |
gcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattatt |
316 |
Q |
| |
|
||||||| ||||||| | ||| || || ||||| ||| || |||||||| |||||||||||||||| || ||||| ||||||||||||||| | || |
|
|
| T |
19605970 |
tcatccaagaacattgaagtttgagcaaagattaaatatccttgtcgatgtttcttctgcattacattaccttcatcatgaatgtgagcaattggtcctt |
19605871 |
T |
|
| Q |
317 |
cattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaa |
392 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | | || || || ||||| ||||||||||||||||||||||||| |
|
|
| T |
19605870 |
cattgtgatctaaagccaagcaatgtccttattgacgacgatatcgttgcacatgtgagtgattttggcatagcaa |
19605795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 10 - 440
Target Start/End: Complemental strand, 9836636 - 9836210
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||||| | || |||||| |||||||||||| |
|
|
| T |
9836636 |
aacctcaaaaagaagggagctcataagagttttattgctgaatgtaatgcactcaaaaatattagacatcgaaatttggtcaaggttataacatgttgtt |
9836537 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||||| || || |||||| ||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||| | |||| || | |
|
|
| T |
9836536 |
ctagtattgattataaaggtggagaatttaaagctttagtttttgattacatgaaaaatggaagct----tagaacaatggctttatccctggacagtgg |
9836441 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|||||||| |||| | ||||||| |||||| ||| || |||| ||| || ||| |||||||||||||||||||||| ||| |||||||||||| | |
|
|
| T |
9836440 |
attcagagtatcctagaacattgaaccttgttcaaagactaaatatctccattgatattgcttctgcattacattatcttcattgtgaatgtgagcaagt |
9836341 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| | |||||||||||| | ||||||||||| | ||||| ||||| ||||||||||||| |||||||||||||||||||||| | || ||||| ||||| |
|
|
| T |
9836340 |
ggtcattcattgtgatatcaagccaagcaacatccttctcgatgataacatggttgctcacgtgagtgattttggcatagcaagacttatctcagccatt |
9836241 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaa |
440 |
Q |
| |
|
| ||||||||||||||| | |||||||||| |
|
|
| T |
9836240 |
gacggtacctctcataaggaaactagtacaa |
9836210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 454 - 578
Target Start/End: Complemental strand, 10216648 - 10216524
Alignment:
| Q |
454 |
aaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattacca |
553 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216648 |
aaccgttggctacactcctccaggtatgttctaaatgcttaaatcttccattgtttctttgaattctcctatgttttggtgaatacttaatatattacca |
10216549 |
T |
|
| Q |
554 |
ttgacatagtattaatagcttttgt |
578 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
10216548 |
ttgacatagtattaatagcttttgt |
10216524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 10 - 486
Target Start/End: Complemental strand, 10660393 - 10659921
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
||||| ||||| || |||||| |||||| || |||||||||||||||||||| ||||| || || || |||| | || |||||||| |||||||||| |
|
|
| T |
10660393 |
aaccttcaaaataagggagctcacaagagcttcattgttgaatgtaatgcactaaaaaatatgaggcatagaaatttggtcaaggttttgacatgttgtt |
10660294 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
| |||||||| |||||||||||||| ||||| ||| |||||||| | |||||||| ||||||||| ||||||||||| | ||||| | || | | |
|
|
| T |
10660293 |
caagtacagattacaaaggtcaagagtttaaggctttagtgtttgaatacatgaacaatggaagcc----tagaacaatggctacatccaggtataatga |
10660198 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| ||| | || || | |||||||||| ||| | | || |||||| | || ||||| || ||||||||| || ||||| |||||||||||| |
|
|
| T |
10660197 |
atgcagggattcaaagattgttggaccttgatcaacgactgaatatcattgttgacattgctagtgtattacattaccttcatcacgaatgtgagcaagc |
10660098 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| | ||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
10660097 |
ggtcattcattgtgatctaaagccaagtaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcagccatt |
10659998 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttcta |
486 |
Q |
| |
|
| | ||||||||| ||| | ||||||||||||||| ||||| || |||||||| ||||||||||||| ||||| |
|
|
| T |
10659997 |
gacgatacctctcacaaggaatttagtacaattggaattaaagggactgttggctatgctcctccaggtattttcta |
10659921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 44 - 479
Target Start/End: Complemental strand, 10652476 - 10652045
Alignment:
| Q |
44 |
ttgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagc |
143 |
Q |
| |
|
||||||||||||||||||| ||||| || || || |||| | ||||||||||| ||||||||||| ||||| || |||||||||||||| ||||| || |
|
|
| T |
10652476 |
ttgttgaatgtaatgcactaaaaaatatgaggcatagaaatttggttaaggttttgacatgttgttcgagtaccgattacaaaggtcaagagtttaaggc |
10652377 |
T |
|
| Q |
144 |
tctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtca |
243 |
Q |
| |
|
| |||||||| | |||||||| || |||| | ||||||||||| | ||||| | || | ||| ||| | || || || |||||||||| ||| |
|
|
| T |
10652376 |
tttagtgtttgaatacatgaacaacggaaacc----tagaacaatggctacatccaggtataatgaatgcagggattcaaagaatgttggaccttgatca |
10652281 |
T |
|
| Q |
244 |
taggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgtt |
343 |
Q |
| |
|
| | || |||||| | || ||||||||| ||||||||| || ||||| |||||||||||| | | ||||||||||||||||||||||| ||||| |
|
|
| T |
10652280 |
acgactgaatatcattgttgacattgcttctgtattacattaccttcatcatgaatgtgagcaagcggtcattcattgtgatctaaagccaagtaatgtc |
10652181 |
T |
|
| Q |
344 |
cttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattg |
443 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||||| ||||||| | ||| | ||||||||||||| |
|
|
| T |
10652180 |
cttcttgatgacgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcagccattgacaatacctctaacaaggaaactagtacaattg |
10652081 |
T |
|
| Q |
444 |
gaataaaaggaaccgttggctacactcctccaggta |
479 |
Q |
| |
|
|||| ||||| || |||||||| |||||||||||| |
|
|
| T |
10652080 |
gaattaaagggactgttggctatgctcctccaggta |
10652045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 630 - 757
Target Start/End: Complemental strand, 10210593 - 10210466
Alignment:
| Q |
630 |
tctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagtctgaaagatattaaaggaatggtggctaagggaatatgcatcacaaggtcca |
729 |
Q |
| |
|
|||||||||||||| ||| | |||||||||| | || |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10210593 |
tctttgtctcctaaagatatatccagtgaaaggctgcagatgttgagtcagagagatattaaaggaatggtggctaagggaatatgcatcaccaggtcca |
10210494 |
T |
|
| Q |
730 |
ggagtttcatacagccagatgtatcaaa |
757 |
Q |
| |
|
||||||||||||| | |||||||||||| |
|
|
| T |
10210493 |
ggagtttcatacaactagatgtatcaaa |
10210466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 9825008 - 9825261
Alignment:
| Q |
17 |
aaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtac |
116 |
Q |
| |
|
||||||| |||||| ||||||||||||| |||||||||| ||||||||| |||||||| ||||| | |||||| |||||||||||| |||||||| |
|
|
| T |
9825008 |
aaaagaagggagctcacaagagttttattaccgaatgtaatgaactcaaaaatattagacatcgaaatttggttaagattttaacatgtttttctagtat |
9825107 |
T |
|
| Q |
117 |
agactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcaga |
216 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| ||| | |||||| ||||||| | |||||||||||||||||| |||| ||| ||| ||| |
|
|
| T |
9825108 |
cgattacaaagggcaagaattcaaagctctagtttttgagtacatgcaaaatggga---agcttagaacaatggttgaatccaaggatagagaatgtaga |
9825204 |
T |
|
| Q |
217 |
gcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttc |
273 |
Q |
| |
|
|||||| | ||||||||| |||| ||| || || || |||||||| ||||||||||| |
|
|
| T |
9825205 |
gcatcctagaacattggatcttgatcaaagattgaatatcattattgatgttgcttc |
9825261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 578 - 726
Target Start/End: Original strand, 10108510 - 10108665
Alignment:
| Q |
578 |
tgttatttatctgcgtatcctgaacccatccttcaccattctatcatc------accatctttgtctcctaatgatttttccagtgaaatgttgaagatg |
671 |
Q |
| |
|
|||||||||||||| | |||||||||||| |||||| |||| | |||| ||| |||||||||||||| ||| |||||||||||| | || ||||| |
|
|
| T |
10108510 |
tgttatttatctgcttttcctgaacccattcttcacgattccaccatcgccgacaccgtctttgtctcctaaagatatttccagtgaaaggctgcagatg |
10108609 |
T |
|
| Q |
672 |
ttgagtctgaaagatattaaa-ggaatggtggctaagggaatatgcatcacaaggt |
726 |
Q |
| |
|
||||||| || |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10108610 |
ttgagtcagagagatattaaaaggaatggtggctaagggaatatgcatcacaaggt |
10108665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 9850985 - 9850843
Alignment:
| Q |
33 |
caagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaa |
132 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| |||||||| ||||| | |||||| ||||||| | ||||||||||| || |||||||| || |
|
|
| T |
9850985 |
caagagttttattacggaatgtaatgccctcaaaat-attagacatcgaaatttggttaagattttaacttcttgttctagtatcgattacaaagggcat |
9850887 |
T |
|
| Q |
133 |
gaatttaaa-gctctagtgttttattacatgaaaaatggaagct |
175 |
Q |
| |
|
||||| ||| |||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
9850886 |
gaattcaaaagctctagttttttagtacatgataaatggaagct |
9850843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 761
Target Start/End: Complemental strand, 9683233 - 9683081
Alignment:
| Q |
594 |
atcctgaacccatccttcaccattctatcatcaccatctttgtctcctaatgatttttccagtgaaatgttgaagatgttgagtctgaaagatattaaag |
693 |
Q |
| |
|
|||||| ||||||||||||| |||| |||| | || |||||||||||||| |||||||| | | |||||||||||| ||| ||||||| |
|
|
| T |
9683233 |
atcctggacccatccttcacaattccatcaactccgtctttgtctcctaaagatttttc---------gctccagatgttgagtcatgtagacattaaag |
9683143 |
T |
|
| Q |
694 |
gaatggtggctaagggaatatgcatcacaaggtccaggagtttcatacagccagatgtatcaaattgc |
761 |
Q |
| |
|
||||||| |||| |||||||||||||||| ||||||| |||| |||||||||||||||||||| |
|
|
| T |
9683142 |
gaatggttgctaggggaatatgcatcaca------aggagttccataaagccagatgtatcaaattgc |
9683081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 10550683 - 10550847
Alignment:
| Q |
8 |
taaacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttg |
107 |
Q |
| |
|
||||||| ||||||| |||| | ||||||||| |||| ||||||||||||||| ||||| ||||| ||| |||| |||||| |||| || ||||| |
|
|
| T |
10550683 |
taaaccttaaaaagaagggagttcacaagagtttcattgctgaatgtaatgcactaaaaaatattaggcacagaaatctagttaaaattttgacttgttg |
10550782 |
T |
|
| Q |
108 |
ttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaa |
172 |
Q |
| |
|
||| || ||||| |||||||| || ||||||||||| || ||| | ||||||| |||||||| |
|
|
| T |
10550783 |
ttccagcacagattacaaaggaagtgagtttaaagctcttgtatttgagtacatgagaaatggaa |
10550847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 576
Target Start/End: Original strand, 10582307 - 10582450
Alignment:
| Q |
432 |
ctagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaattctcctatgttttg |
531 |
Q |
| |
|
||||||||||||| | ||||||||| |||||||| ||| || || || || ||||| |||| |||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
10582307 |
ctagtacaattgggacaaaaggaacagttggctatgctcttctagatacgtactaaagtcttgaatcttccattgtttcttttaataatcctatg-tttg |
10582405 |
T |
|
| Q |
532 |
gtgaatacttaatatattaccattgacatagtattaatagctttt |
576 |
Q |
| |
|
||| |||||| || ||||| ||||||||||||| ||||||| |
|
|
| T |
10582406 |
gtgttgacttaaaattataccagcgacatagtattaacagctttt |
10582450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 268; Significance: 1e-149; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 33 - 517
Target Start/End: Original strand, 12899494 - 12899974
Alignment:
| Q |
33 |
caagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaa |
132 |
Q |
| |
|
||||||||| ||| | |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||| | |||||||||||| |
|
|
| T |
12899494 |
caagagtttcattttagaatgtaatgcactcaaaaacattcgacaccgaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaa |
12899593 |
T |
|
| Q |
133 |
gaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattg |
232 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| ||||| |||| ||| ||| || | | ||||| ||||||| |
|
|
| T |
12899594 |
gaatttaaagctctagtttttgaatacatgaaaaatggaagct----tagaacaatggttacatcccgagactttgaatgcaaatcctccaacaacattg |
12899689 |
T |
|
| Q |
233 |
gaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagc |
332 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| |||||| |
|
|
| T |
12899690 |
aaccttggtcatagattaaacatcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattagtctttcattgtgatataaagc |
12899789 |
T |
|
| Q |
333 |
caagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatac |
432 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
12899790 |
caagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcaacaatttctggtacctctcataagaatac |
12899889 |
T |
|
| Q |
433 |
tagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaat |
517 |
Q |
| |
|
||| |||||||||||||||||||| ||||| || ||||||| |||||||| ||||| |||| |||||||||||||| ||||||| |
|
|
| T |
12899890 |
tagcacaattggaataaaaggaacagttggttatgctcctccgggtatgttttaaattcttgaatcttccattgtttttttgaat |
12899974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 517
Target Start/End: Original strand, 12957979 - 12958482
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||||| || || |||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||| | |||| ||||||||||||||||| |
|
|
| T |
12957979 |
aacctccagaaaaagggagctcacaagagtttcattgttgaatgtaacgcactcaaaaatattagacaccgaaatttggttagggttttaacatgttgtt |
12958078 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||| ||| | |||||| |||||||||||| ||||||| ||||| |||||| | ||||| | |
|
|
| T |
12958079 |
ctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatggaaaatggaagct----tagaacagtggttacatcctcaaattttga |
12958174 |
T |
|
| Q |
210 |
attcagag-catccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaat |
308 |
Q |
| |
|
|| | ||| | ||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
12958175 |
atgc-gagtcctccaacaacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcagt |
12958273 |
T |
|
| Q |
309 |
tgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccat |
408 |
Q |
| |
|
| || |||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
12958274 |
taatccttcactgtgatctaaagccaagcaatgtccttcttgatggtgacatggttgctcatgtgagtgattttggaatagcaagacttgtctcaaccat |
12958373 |
T |
|
| Q |
409 |
tggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgtt |
508 |
Q |
| |
|
| ||||||||| ||||||||||||| |||||||||||||||||||| ||||| || ||||||| |||||||| ||||| |||| ||||||||||||| |
|
|
| T |
12958374 |
ttccggtacctctaataagaatactagcacaattggaataaaaggaacagttggttatgctcctccgggtatgttttaaattcttgaatcttccattgtt |
12958473 |
T |
|
| Q |
509 |
tctttgaat |
517 |
Q |
| |
|
| ||||||| |
|
|
| T |
12958474 |
tttttgaat |
12958482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 16 - 509
Target Start/End: Original strand, 12932186 - 12932675
Alignment:
| Q |
16 |
caaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagta |
115 |
Q |
| |
|
||||| || |||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||||| | |
|
|
| T |
12932186 |
caaaaaaagggagctcacaagagtttcattgttgaatgtaacgcactcaaaaatattagacaccgaaatttggttaaggttttaacatgttgttctagca |
12932285 |
T |
|
| Q |
116 |
cagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcag |
215 |
Q |
| |
|
|| | ||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||| ||||||| ||||| |||||||||| ||| ||| || |
|
|
| T |
12932286 |
caaattacaaaggtcaagaatttaaagcactagtttttgaatacatgaaaaatggaagct----tagaacagtggttacatcctgagactttgaatgcaa |
12932381 |
T |
|
| Q |
216 |
agcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattat |
315 |
Q |
| |
|
| | ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||| || |||| |||||||||||| || || | |
|
|
| T |
12932382 |
atcctccaacaacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattgcattaccttcatcgagaatgtgagcagttaatcct |
12932481 |
T |
|
| Q |
316 |
tcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggt |
415 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||| |
|
|
| T |
12932482 |
tcattgtgatctaaaaccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcaaccatttccggt |
12932581 |
T |
|
| Q |
416 |
acctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgttt |
509 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||| |||||||||| ||||| || |||| || |||||||| ||||| |||| |||||||||||||| |
|
|
| T |
12932582 |
acctctaataagaatactagcacaatcggagtaaaaggaacagttggttatgctccaccgggtatgttttaaattcttgaatcttccattgttt |
12932675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 10 - 509
Target Start/End: Original strand, 12948545 - 12949040
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||||| || || |||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
12948545 |
aacctccagaaaaagggagctcacaagagtttcattgttgaatgtaatgcactaaaaaatattagacaccgaaatttggttaaggttttaacatgttgtt |
12948644 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||| ||| | ||||||| |||||||||||||||||||| ||| | ||||||||||||||||||| ||||||| ||||| |||||||||| ||| | |
|
|
| T |
12948645 |
ctagcacaaataacaaaggccaagaatttaaagctctagtttttgaatacatgaaaaatggaagct----tagaacagtggttacatcctgagactttga |
12948740 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| || | | ||||| ||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
12948741 |
atgcaaatcctccaacaacattgaaccttcgtcgtagattaaacatcattatcgatgttgcttctgcattacattatcttcatcgataatgtgagcaatt |
12948840 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
12948841 |
agtccttcattgtgatctaaaaccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcaaccatt |
12948940 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgttt |
509 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| ||||| || |||| || |||| ||| || || |||| |||||||||||||| |
|
|
| T |
12948941 |
tccagtacctctaataagaatactagtacaattggaataaaaggaacagttggttatgctccaccgggtacgttttacattcttgaatcttccattgttt |
12949040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 37 - 517
Target Start/End: Original strand, 12907118 - 12907594
Alignment:
| Q |
37 |
agttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacagactacaaaggtcaagaat |
136 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||| |||| | |||||||||||||||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
12907118 |
agtttcattgttgaatgtaacgcactcaaaaatattagacacagaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaat |
12907217 |
T |
|
| Q |
137 |
ttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggacc |
236 |
Q |
| |
|
||||||||||||| ||| | ||||||||||||||||||| ||||||| ||||| |||||||| | ||| ||| || | | ||||| ||||||| ||| |
|
|
| T |
12907218 |
ttaaagctctagtttttgaatacatgaaaaatggaagct----tagaacagtggttacatcctgaaactttgaatgcaaatcctccaacaacattgaacc |
12907313 |
T |
|
| Q |
237 |
ttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaag |
336 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| || || | |||||||||||||| ||||| |
|
|
| T |
12907314 |
ttggtcttagattaaacatcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcagttaatcctccattgtgatctaaaaccaag |
12907413 |
T |
|
| Q |
337 |
caatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccattggtggtacctctcataagaatactagt |
436 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12907414 |
caatgtccttcttgatgatgacatggttgctcatttgagtgattttggcatagcaagacttgtctcaaccatttctggtacctctcataagaatactagc |
12907513 |
T |
|
| Q |
437 |
acaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgtttctttgaat |
517 |
Q |
| |
|
| ||| |||||||||||||| ||||| || |||| || |||||||| ||||| ||| |||||||||||||| ||||||| |
|
|
| T |
12907514 |
ataatcggaataaaaggaacagttggttatgctccaccgggtatgttttaaattctttaatcttccattgtttttttgaat |
12907594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 235; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 10 - 509
Target Start/End: Complemental strand, 17923711 - 17923216
Alignment:
| Q |
10 |
aacctccaaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgtt |
109 |
Q |
| |
|
|||||||| || || |||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
17923711 |
aacctccataaaaagggagctcacaagagtttcgttgttgaatgtaacgcactcaaaaatattagacaccgaaatttggttaaggttttaacatgttgtt |
17923612 |
T |
|
| Q |
110 |
ctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaa |
209 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||| ||||| |||||||||| ||| | |
|
|
| T |
17923611 |
ctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagct----tagaacagtggttacatcctgagactttga |
17923516 |
T |
|
| Q |
210 |
attcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaatt |
309 |
Q |
| |
|
|| || | | ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||| || |||| |||||||||||| || |
|
|
| T |
17923515 |
atgcaaatcctccaacaacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattgcattaccttcatcgagaatgtgagcagtt |
17923416 |
T |
|
| Q |
310 |
gattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaacatttgtctcaaccatt |
409 |
Q |
| |
|
|| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
17923415 |
aatccttcattgtgatctaaaaccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctcaaccatt |
17923316 |
T |
|
| Q |
410 |
ggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaaatgcttgcatcttccattgttt |
509 |
Q |
| |
|
||||||||| |||||||||||||||| || |||||||||||||| ||||| || |||| | |||||||| ||||| |||| ||||| | |||||| |
|
|
| T |
17923315 |
tccggtacctctaataagaatactagtacgatcggaataaaaggaacagttggttatgctccatcgggtatgttttaaattcttgaatcttgctttgttt |
17923216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 225; Significance: 1e-123; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 88 - 517
Target Start/End: Original strand, 7272 - 7697
Alignment:
| Q |
88 |
gttaaggttttaacatgttgttctagtacagactacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaa |
187 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||| |
|
|
| T |
7272 |
gttagggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagct----tagaacag |
7367 |
T |
|
| Q |
188 |
tggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatc |
287 |
Q |
| |
|
||||| |||||||||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
7368 |
tggttacatcctgagactttgaatgcaaatcctccaataacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattacattaac |
7467 |
T |
|
| Q |
288 |
tgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcat |
387 |
Q |
| |
|
| |||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7468 |
ttcatcgagaatgtgagcaattaatacttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcat |
7567 |
T |
|
| Q |
388 |
agcaacatttgtctcaaccattggtggtacctctcataagaatactagtacaattggaataaaaggaaccgttggctacactcctccaggtatgttctaa |
487 |
Q |
| |
|
||||| | |||||||||||||| |||||| ||| ||||||||||||| ||||| |||||||||||||| | ||| || |||| || |||||||| ||| |
|
|
| T |
7568 |
agcaagacttgtctcaaccatttctggtacgtctaataagaatactagcacaatcggaataaaaggaacagctggttatgctccaccgggtatgttttaa |
7667 |
T |
|
| Q |
488 |
atgcttgcatcttccattgtttctttgaat |
517 |
Q |
| |
|
|| |||| |||||||||||||| ||||||| |
|
|
| T |
7668 |
attcttgaatcttccattgtttttttgaat |
7697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 19 - 392
Target Start/End: Complemental strand, 31467461 - 31467092
Alignment:
| Q |
19 |
aagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacag |
118 |
Q |
| |
|
||||| |||||| ||||||||| ||| |||||| |||||||||||||| |||||||||||||| | |||||| |||||||| | ||||| ||||||| |
|
|
| T |
31467461 |
aagaaaggagctcacaagagtttccttgctgaatgcaatgcactcaaaaatattagacaccgaaatttggttaagattttaacaagctgttccagtacag |
31467362 |
T |
|
| Q |
119 |
actacaaaggtcaagaatttaaagctctagtgttttattacatgaaaaatggaagctagcttagaacaatggttgcatcctgagattttaaattcagagc |
218 |
Q |
| |
|
| | ||||| |||||||||||||||||| || || | ||||||||||| ||| ||||||||| ||||||||||| | | || | ||| | |
|
|
| T |
31467361 |
atttcaaagatcaagaatttaaagctcttgttttcgagtacatgaaaaacgga----agcttagaaagttggttgcatccagcaaaagaaattgcaggtc |
31467266 |
T |
|
| Q |
219 |
atccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattca |
318 |
Q |
| |
|
|||||||||| | || | || |||||||| || ||||| || |||||||| ||||| |||||||| ||||| |||||| ||||| | ||||| |
|
|
| T |
31467265 |
cagaaaaaacattgaatctagcacaaaggttaaatattattattgacgttgcttcggcatttcattatcttcatcatgaatgtcagcaacctgtcattca |
31467166 |
T |
|
| Q |
319 |
ttgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaa |
392 |
Q |
| |
|
||||||| ||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
31467165 |
ttgtgatttaaagcctagcaacgttcttcttgatgattctatggtagctcatgtgagtgattttggcatagcaa |
31467092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 28605824 - 28605894
Alignment:
| Q |
314 |
attcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttgg |
384 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
28605824 |
attcattgtgatttaaagccaagcaatattcttcttcataatgacatggttgctcatgtgagtgattttgg |
28605894 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 48; Significance: 5e-18; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 315 - 390
Target Start/End: Complemental strand, 39875899 - 39875824
Alignment:
| Q |
315 |
ttcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagc |
390 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39875899 |
ttcattgtgatttaaaaccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcttagc |
39875824 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 315 - 390
Target Start/End: Complemental strand, 39884022 - 39883947
Alignment:
| Q |
315 |
ttcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagc |
390 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39884022 |
ttcattgtgatttaaaaccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcttagc |
39883947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 315 - 390
Target Start/End: Complemental strand, 39890976 - 39890901
Alignment:
| Q |
315 |
ttcattgtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagc |
390 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39890976 |
ttcattgtgatttaaaaccaagcaatgtccttcttgaagatgacatggttgctcatgtgagtgattttggcttagc |
39890901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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