View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5525-Insertion-2 (Length: 650)

Name: NF5525-Insertion-2
Description: NF5525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5525-Insertion-2
NF5525-Insertion-2
[»] chr3 (42 HSPs)
chr3 (8-648)||(11003816-11004456)
chr3 (150-465)||(3297147-3297456)
chr3 (8-135)||(33372490-33372617)
chr3 (8-135)||(21632980-21633107)
chr3 (8-135)||(45003580-45003707)
chr3 (8-135)||(14171753-14171880)
chr3 (8-135)||(19112932-19113059)
chr3 (8-135)||(45969999-45970126)
chr3 (8-135)||(14161955-14162082)
chr3 (8-135)||(15328544-15328671)
chr3 (8-135)||(16722075-16722202)
chr3 (16-135)||(17465535-17465653)
chr3 (285-465)||(43772916-43773095)
chr3 (8-135)||(5800689-5800816)
chr3 (8-135)||(9267142-9267269)
chr3 (8-135)||(20853863-20853990)
chr3 (8-135)||(30500208-30500335)
chr3 (8-135)||(49986612-49986739)
chr3 (8-135)||(14262203-14262330)
chr3 (8-135)||(52552859-52552982)
chr3 (6-135)||(35995845-35995974)
chr3 (8-135)||(43572473-43572602)
chr3 (556-648)||(9105379-9105471)
chr3 (8-135)||(47575439-47575566)
chr3 (542-648)||(9697692-9697798)
chr3 (9-135)||(38283635-38283761)
chr3 (542-648)||(43547829-43547935)
chr3 (557-648)||(21847215-21847306)
chr3 (557-648)||(21850305-21850396)
chr3 (11-135)||(4204875-4204999)
chr3 (8-90)||(17649222-17649304)
chr3 (557-648)||(43554673-43554764)
chr3 (8-53)||(4204792-4204837)
chr3 (8-53)||(43572640-43572685)
chr3 (9-53)||(38283799-38283843)
chr3 (8-39)||(21633159-21633190)
chr3 (8-39)||(35995762-35995793)
chr3 (8-38)||(14162135-14162165)
chr3 (8-38)||(14262120-14262150)
chr3 (571-628)||(755955-756012)
chr3 (599-632)||(54167344-54167377)
chr3 (599-632)||(54171924-54171957)
[»] scaffold0014 (1 HSPs)
scaffold0014 (150-441)||(11078-11373)
[»] chr4 (47 HSPs)
chr4 (136-467)||(26439572-26439913)
chr4 (235-470)||(1990829-1991064)
chr4 (268-465)||(20357027-20357224)
chr4 (8-135)||(38574135-38574262)
chr4 (8-135)||(46046591-46046718)
chr4 (8-135)||(7819098-7819225)
chr4 (8-135)||(9516777-9516904)
chr4 (9-135)||(9396784-9396910)
chr4 (10-135)||(18667375-18667500)
chr4 (8-137)||(34064147-34064276)
chr4 (8-135)||(31944034-31944161)
chr4 (8-135)||(9619064-9619190)
chr4 (8-135)||(15640799-15640926)
chr4 (8-135)||(3018096-3018223)
chr4 (8-135)||(18713044-18713171)
chr4 (8-111)||(26252352-26252455)
chr4 (8-135)||(37012874-37013001)
chr4 (542-648)||(50627889-50627995)
chr4 (540-648)||(10317008-10317116)
chr4 (536-648)||(35842851-35842963)
chr4 (536-647)||(8892561-8892672)
chr4 (8-135)||(31090228-31090355)
chr4 (8-135)||(4355965-4356092)
chr4 (8-135)||(48580033-48580160)
chr4 (557-648)||(31670195-31670286)
chr4 (542-648)||(27186250-27186356)
chr4 (542-648)||(43683621-43683727)
chr4 (8-137)||(13132106-13132235)
chr4 (8-131)||(3273706-3273828)
chr4 (556-646)||(53722113-53722203)
chr4 (8-92)||(41947066-41947150)
chr4 (8-111)||(35376246-35376346)
chr4 (74-135)||(48259901-48259962)
chr4 (370-469)||(16878957-16879057)
chr4 (8-66)||(15640951-15641009)
chr4 (8-53)||(3273869-3273914)
chr4 (8-53)||(13132025-13132070)
chr4 (8-39)||(34064066-34064097)
chr4 (8-38)||(37012791-37012821)
chr4 (599-632)||(3770966-3770999)
chr4 (8-53)||(7819263-7819308)
chr4 (156-216)||(20357296-20357354)
chr4 (8-53)||(35376377-35376422)
chr4 (8-53)||(38574052-38574097)
chr4 (599-632)||(44147147-44147180)
chr4 (599-632)||(44151682-44151715)
chr4 (8-56)||(31944196-31944244)
[»] chr1 (37 HSPs)
chr1 (268-468)||(9022189-9022389)
chr1 (8-137)||(4907127-4907256)
chr1 (8-135)||(13229816-13229942)
chr1 (8-135)||(17606392-17606519)
chr1 (8-135)||(39826217-39826340)
chr1 (536-648)||(43591762-43591874)
chr1 (8-135)||(43539431-43539558)
chr1 (8-135)||(48072045-48072172)
chr1 (8-135)||(52058178-52058302)
chr1 (8-135)||(20995753-20995880)
chr1 (8-135)||(30299315-30299442)
chr1 (8-135)||(33628857-33628984)
chr1 (8-135)||(39711156-39711283)
chr1 (9-135)||(42510181-42510307)
chr1 (10-134)||(8292890-8293014)
chr1 (8-131)||(24467712-24467835)
chr1 (8-131)||(18462369-18462492)
chr1 (557-640)||(26311622-26311705)
chr1 (557-640)||(26316113-26316196)
chr1 (8-111)||(34749297-34749399)
chr1 (557-640)||(16588440-16588523)
chr1 (566-640)||(39793943-39794017)
chr1 (8-135)||(29696648-29696774)
chr1 (8-135)||(39970813-39970939)
chr1 (47-135)||(215079-215167)
chr1 (8-53)||(24467876-24467921)
chr1 (8-56)||(18462530-18462578)
chr1 (8-54)||(7473876-7473922)
chr1 (8-66)||(39970730-39970788)
chr1 (8-45)||(52058095-52058132)
chr1 (92-135)||(7473959-7474002)
chr1 (8-111)||(16294138-16294241)
chr1 (8-39)||(29696821-29696852)
chr1 (8-38)||(17606572-17606602)
chr1 (8-53)||(4907046-4907091)
chr1 (156-216)||(9022058-9022116)
chr1 (8-45)||(42510167-42510204)
[»] chr8 (41 HSPs)
chr8 (261-465)||(44609066-44609269)
chr8 (235-456)||(13145131-13145352)
chr8 (16-135)||(43851831-43851950)
chr8 (8-135)||(7689607-7689734)
chr8 (8-135)||(10108454-10108581)
chr8 (8-135)||(30789674-30789801)
chr8 (8-137)||(2583404-2583533)
chr8 (536-648)||(33072022-33072134)
chr8 (8-135)||(14767674-14767801)
chr8 (8-135)||(17623054-17623181)
chr8 (8-135)||(42605837-42605964)
chr8 (330-461)||(26378278-26378411)
chr8 (8-135)||(21148104-21148230)
chr8 (9-135)||(42113151-42113277)
chr8 (9-135)||(5554954-5555080)
chr8 (551-648)||(42234650-42234747)
chr8 (8-135)||(26136769-26136896)
chr8 (557-648)||(28644666-28644757)
chr8 (8-135)||(14820378-14820505)
chr8 (8-135)||(22494469-22494595)
chr8 (557-640)||(38757103-38757186)
chr8 (557-640)||(30405782-30405865)
chr8 (557-640)||(30410291-30410374)
chr8 (8-135)||(43481481-43481608)
chr8 (8-102)||(21144705-21144799)
chr8 (68-136)||(26532949-26533017)
chr8 (80-135)||(22848485-22848540)
chr8 (8-39)||(26136948-26136979)
chr8 (577-628)||(27435172-27435223)
chr8 (8-38)||(21148021-21148051)
chr8 (599-632)||(197684-197717)
chr8 (599-632)||(202202-202235)
chr8 (599-632)||(312521-312554)
chr8 (599-632)||(317039-317072)
chr8 (8-53)||(7689772-7689817)
chr8 (8-53)||(17622971-17623016)
chr8 (6-39)||(22494570-22494603)
chr8 (8-53)||(42113068-42113113)
chr8 (599-632)||(43807485-43807518)
chr8 (599-632)||(43812044-43812077)
chr8 (156-216)||(44609442-44609500)
[»] chr2 (36 HSPs)
chr2 (246-471)||(1499593-1499819)
chr2 (261-465)||(1500653-1500857)
chr2 (8-135)||(17850753-17850880)
chr2 (8-135)||(15106151-15106278)
chr2 (8-135)||(22263358-22263485)
chr2 (8-135)||(23806036-23806163)
chr2 (8-135)||(23854833-23854960)
chr2 (8-135)||(26135901-26136028)
chr2 (9-135)||(26560721-26560847)
chr2 (8-135)||(39878186-39878313)
chr2 (8-128)||(17463175-17463295)
chr2 (8-135)||(42670886-42671013)
chr2 (8-135)||(13284575-13284702)
chr2 (8-135)||(19251554-19251681)
chr2 (8-111)||(26236211-26236313)
chr2 (11-135)||(20498832-20498956)
chr2 (557-648)||(12999426-12999517)
chr2 (8-135)||(33290133-33290260)
chr2 (566-640)||(8050951-8051025)
chr2 (566-640)||(8055504-8055578)
chr2 (557-640)||(6463400-6463483)
chr2 (8-62)||(13254581-13254635)
chr2 (590-648)||(13270980-13271038)
chr2 (8-45)||(13254693-13254730)
chr2 (8-66)||(15106303-15106361)
chr2 (8-66)||(23806188-23806246)
chr2 (8-38)||(26560638-26560668)
chr2 (106-136)||(30959942-30959972)
chr2 (8-54)||(33290297-33290343)
chr2 (8-53)||(19251719-19251764)
chr2 (106-135)||(26236277-26236306)
chr2 (62-111)||(30390619-30390667)
chr2 (8-53)||(34548657-34548702)
chr2 (599-632)||(36670627-36670660)
chr2 (599-632)||(36675175-36675208)
chr2 (8-56)||(13284492-13284540)
[»] chr7 (38 HSPs)
chr7 (8-135)||(28218330-28218457)
chr7 (8-135)||(41600125-41600252)
chr7 (8-135)||(12006707-12006834)
chr7 (8-135)||(20419703-20419830)
chr7 (8-135)||(23704745-23704872)
chr7 (8-135)||(48672446-48672573)
chr7 (536-648)||(7466464-7466576)
chr7 (8-135)||(20458858-20458985)
chr7 (8-135)||(31851406-31851533)
chr7 (8-135)||(6465938-6466065)
chr7 (8-135)||(20963662-20963788)
chr7 (8-135)||(10409458-10409585)
chr7 (542-648)||(733614-733719)
chr7 (8-130)||(38879896-38880018)
chr7 (9-136)||(1250372-1250499)
chr7 (539-648)||(35705739-35705848)
chr7 (557-648)||(22901260-22901351)
chr7 (8-135)||(23383667-23383794)
chr7 (8-137)||(7658135-7658263)
chr7 (8-111)||(25772523-25772625)
chr7 (8-111)||(48648421-48648523)
chr7 (553-648)||(47419536-47419631)
chr7 (557-640)||(27756958-27757041)
chr7 (557-640)||(27761509-27761592)
chr7 (9-135)||(44817002-44817128)
chr7 (74-135)||(24194941-24195002)
chr7 (352-463)||(8482532-8482644)
chr7 (8-68)||(7658055-7658115)
chr7 (27-135)||(33162638-33162746)
chr7 (8-53)||(28218263-28218308)
chr7 (8-72)||(16995283-16995347)
chr7 (8-39)||(20458775-20458806)
chr7 (8-51)||(24195047-24195090)
chr7 (8-39)||(44816919-44816950)
chr7 (599-632)||(7940083-7940116)
chr7 (599-632)||(7944636-7944669)
chr7 (9-46)||(24194980-24195017)
chr7 (8-53)||(48672363-48672408)
[»] chr5 (44 HSPs)
chr5 (8-135)||(7126084-7126211)
chr5 (536-648)||(36632406-36632518)
chr5 (8-135)||(24837336-24837463)
chr5 (8-135)||(993914-994040)
chr5 (8-135)||(20709379-20709506)
chr5 (8-135)||(31799807-31799934)
chr5 (8-135)||(4919157-4919284)
chr5 (8-111)||(14411781-14411884)
chr5 (8-135)||(17762366-17762493)
chr5 (536-648)||(19502413-19502525)
chr5 (8-135)||(14143985-14144112)
chr5 (8-127)||(29444890-29445009)
chr5 (522-647)||(20830256-20830380)
chr5 (536-648)||(32485926-32486038)
chr5 (543-648)||(26336753-26336858)
chr5 (9-137)||(41001518-41001646)
chr5 (8-135)||(6817289-6817415)
chr5 (8-135)||(24074387-24074513)
chr5 (8-135)||(24650867-24650993)
chr5 (553-640)||(30695405-30695492)
chr5 (8-135)||(22571244-22571371)
chr5 (8-111)||(27159148-27159251)
chr5 (8-93)||(18336552-18336637)
chr5 (578-650)||(43385054-43385126)
chr5 (556-640)||(40367572-40367657)
chr5 (8-53)||(6817206-6817251)
chr5 (68-131)||(23979046-23979109)
chr5 (8-54)||(22571161-22571207)
chr5 (8-53)||(20709296-20709341)
chr5 (8-53)||(23979150-23979195)
chr5 (9-39)||(17762545-17762575)
chr5 (73-111)||(18336637-18336674)
chr5 (8-38)||(27159074-27159104)
chr5 (8-38)||(29445070-29445100)
chr5 (8-38)||(31799724-31799754)
chr5 (599-632)||(7099374-7099407)
chr5 (599-632)||(7103943-7103976)
chr5 (9-38)||(7126002-7126031)
chr5 (599-632)||(12018855-12018888)
chr5 (599-632)||(12023413-12023446)
chr5 (599-632)||(16794232-16794265)
chr5 (599-632)||(16798793-16798826)
chr5 (599-632)||(37658845-37658878)
chr5 (599-632)||(37682149-37682182)
[»] scaffold0141 (2 HSPs)
scaffold0141 (14-135)||(8413-8534)
scaffold0141 (8-53)||(8571-8616)
[»] scaffold0809 (2 HSPs)
scaffold0809 (8-135)||(1494-1621)
scaffold0809 (8-39)||(1673-1704)
[»] scaffold0361 (1 HSPs)
scaffold0361 (8-135)||(4647-4774)
[»] scaffold0185 (1 HSPs)
scaffold0185 (8-135)||(4036-4163)
[»] chr6 (28 HSPs)
chr6 (8-135)||(24732022-24732149)
chr6 (8-135)||(9481266-9481393)
chr6 (536-648)||(17886789-17886901)
chr6 (536-648)||(17895664-17895776)
chr6 (8-135)||(2299477-2299603)
chr6 (8-135)||(10321898-10322025)
chr6 (8-135)||(30618046-30618172)
chr6 (9-135)||(3230030-3230155)
chr6 (536-648)||(14531728-14531840)
chr6 (8-111)||(33637643-33637746)
chr6 (8-135)||(18500513-18500641)
chr6 (557-648)||(17096236-17096327)
chr6 (10-135)||(26385445-26385566)
chr6 (557-648)||(27552072-27552163)
chr6 (8-111)||(32017696-32017798)
chr6 (8-120)||(30459083-30459195)
chr6 (68-135)||(17142805-17142872)
chr6 (566-640)||(8315474-8315548)
chr6 (566-648)||(27574709-27574791)
chr6 (62-135)||(33714654-33714727)
chr6 (553-640)||(17780027-17780114)
chr6 (566-640)||(8320013-8320087)
chr6 (69-135)||(14681049-14681115)
chr6 (8-56)||(19284213-19284261)
chr6 (8-66)||(9854123-9854181)
chr6 (8-38)||(9481446-9481476)
chr6 (8-53)||(14680966-14681011)
chr6 (8-36)||(32017620-32017648)
[»] scaffold0176 (1 HSPs)
scaffold0176 (8-137)||(15798-15926)
[»] scaffold0449 (1 HSPs)
scaffold0449 (8-111)||(7390-7493)
[»] scaffold0881 (2 HSPs)
scaffold0881 (8-135)||(387-513)
scaffold0881 (9-39)||(305-335)
[»] scaffold0117 (1 HSPs)
scaffold0117 (8-53)||(12231-12276)
[»] scaffold0440 (1 HSPs)
scaffold0440 (599-632)||(3104-3137)
[»] scaffold0352 (1 HSPs)
scaffold0352 (74-111)||(4745-4781)
[»] scaffold0044 (2 HSPs)
scaffold0044 (599-632)||(44865-44898)
scaffold0044 (599-632)||(49445-49478)


Alignment Details
Target: chr3 (Bit Score: 502; Significance: 0; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 8 - 648
Target Start/End: Original strand, 11003816 - 11004456
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11003816 gtaatttcagattcttccacttttggtccatcctttcatcaagtcaacaaaatatgcatcaattacgtccctgtaatttcagattcctcccacttttggt 11003915  T
Q  108 ccctgtaatttcatattcctccacttttagagaagcaaatggcggcggcggcgaggagagagaagcaccaccatggaaggagagagaggcacggtgaagg 207  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  11003916 ccctgtaatttcagattcctccacttttagagaagcaaatggcggcggcggcgaggagagagaagcaccactgtggaaggagagagaggcacggtgaagg 11004015  T
Q  208 tgaaggtgagcttcgcgagagaatagtgagaaaagtgtgaaacgcgtgtgatgaaatgacagagaattgtgaaatttttgtattttaggtgttattttaa 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11004016 tgaaggtgagcttcgcgagagaatagtgagaaaagtgtgaaacgcgtgtgatgaaatgacagagaattgtgaaatgtttgtattttaggtgttattttaa 11004115  T
Q  308 atccttcaaattttgcaaaagagaaatttttatctaaatgccttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaa 407  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11004116 atccttcaaattttgcaaaagagaaattcttatctaaatgccttgaatttaaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaa 11004215  T
Q  408 tttaaattctccaaaaaattacattccctcattaaaatactctatccaaacacactcttagggttttggtaaattatgtgaattnnnnnnnnnnnnnnnn 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||                    
T  11004216 tttaaattctccaaaaaattacattccctcattaaaatactctatccaaacacactcttagggttttggtaaattgtgtgaattagagagaatgaaaaga 11004315  T
Q  508 nnnnnnnnntaatggaattgaaaaatgaaaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcga 607  Q
             |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||| ||    
T  11004316 gagaagagataatggaattgaaaaatgaaaattgttattgatacttatgaaaatatacaaaggaggtagcttatatacaatgtctagctaggttgcttga 11004415  T
Q  608 agcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11004416 agcacaaacaatgtaacaaactctagatcttatttgctaac 11004456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 150 - 465
Target Start/End: Complemental strand, 3297456 - 3297147
Alignment:
Q  150 cggcggcggcgaggagagagaagcaccaccatggaaggagagagaggcacggtgaaggtgaaggtgagcttcgcgagagaatagtgagaaaagtgtgaaa 249  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||      ||||||| |||||||||||||||||||| ||||    
T  3297456 cggcggcggcaaggagagagaagcaccaccgtggaaggagagagaggcacggtgaaggtga------gcttcgcaagagaatagtgagaaaagtgcgaaa 3297363  T
Q  250 cgcgtgtgatgaaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatctaaatgcc 349  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  3297362 ctcgtgtgatgaaatgacagagaattgtgaaatttttgtattttaggtgttattataaatccttcaaattttgcaaaagagaaattcttatctaaatgcc 3297263  T
Q  350 ttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactc 449  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3297262 ttgaattttaaaaatgacttaaatattctcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactc 3297163  T
Q  450 tatccaaacacactct 465  Q
    ||||||||||||||||    
T  3297162 tatccaaacacactct 3297147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 33372490 - 33372617
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||||||| |||| |||||||||||||||||| ||||||||||    
T  33372490 gtaatttcagattattccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattaagtccttgtaatttcagattcctcccacttttggt 33372589  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||||||||||||||||||||    
T  33372590 ctctgtaatttcatattcctccactttt 33372617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 21632980 - 21633107
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  21632980 gtaatttcagattctttcacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt 21633079  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  21633080 ccttgtaatttcagattcctccactttt 21633107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 45003580 - 45003707
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  || || || |||||||||| |||||||||||||||||| |||||||| |    
T  45003580 gtaatttcagattcttccactttttgtccctcctttcatcacgtcaacagaatctgtataaattacgtccttgtaatttcagattcctcccacttttgtt 45003679  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||||||||||||||    
T  45003680 ccctgtaatttcatattcctccactttt 45003707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 14171880 - 14171753
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| || ||||||||||||| || |||||||||||||||||| ||||||||||    
T  14171880 gtaatttctgattcttccacttttggtccttcctttcatcacgtcagcaaaatctgcatcaattacgaccttgtaatttcagattcctcccacttttggt 14171781  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||| ||||    
T  14171780 ccctgtaatttcagattcctccattttt 14171753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 19113059 - 19112932
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||  || ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  19113059 gtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctcccacttttggt 19112960  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||| ||||||||||    
T  19112959 ccctgtaatttcagatttctccactttt 19112932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 45969999 - 45970126
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  45969999 gtaatttcagattctttcacttttggtctctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt 45970098  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||| ||||||||||    
T  45970099 ccctgtaatttcagatttctccactttt 45970126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 14161955 - 14162082
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||| |||||||||||||||||||||||||||||  | |||||||    
T  14161955 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctaattttggt 14162054  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||| ||||    
T  14162055 ccctgtaatttcaaattcctccattttt 14162082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 15328544 - 15328671
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||| |||  ||||||| ||||||||||||||||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  15328544 gtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt 15328643  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  15328644 ccctgtaatttcaaattcctccactttt 15328671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 16722075 - 16722202
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||  || ||||| ||||| ||| ||||||||||||||||||| ||||| ||||    
T  16722075 gtaatttcagattcttccacttttggtcccttctttcatcaagtcaacagaatctgcataaattatgtcactgtaatttcagattcctcccacttctggt 16722174  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  16722175 ccctgtaatttcagattcctccactttt 16722202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 17465653 - 17465535
Alignment:
Q  16 agattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtccctgtaa 115  Q
    |||||||| ||||||||||||||||||||||||||||||||| || | ||| ||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  17465653 agattctttcacttttggtccctcctttcatcacgtcaacaaaatttacataaattacgtctctgtaatttcagattcctcccacttttggt-cctgtaa 17465555  T
Q  116 tttcatattcctccactttt 135  Q
    ||||||||||||||||||||    
T  17465554 tttcatattcctccactttt 17465535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 285 - 465
Target Start/End: Complemental strand, 43773095 - 43772916
Alignment:
Q  285 ttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatctaaatgccttgaattttaaaaatgacttaaatattttcccaaa 384  Q
    ||||| ||||||||||||||||||| ||| |||||||| |||||| ||||| ||||||||||  ||||||||| |||||||| |||||||||||||||||    
T  43773095 ttgtaatttaggtgttattttaaatgctttaaattttggaaaagaaaaattcttatctaaatatcttgaatttcaaaaatgaattaaatattttcccaaa 43772996  T
Q  385 caatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactctatccaaacacactct 465  Q
    || | |||||| |  ||| |||||| |||| |||||||| ||||||||||||  ||||| | | |||||||||||||||||    
T  43772995 cagt-gaatttagtccaaatcaattcaaatactccaaaagattacattccctagttaaagttccctatccaaacacactct 43772916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 5800689 - 5800816
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||  || ||||| |||||||||||||||||||||||||||||  | |||||||    
T  5800689 gtaatttcatattcttccatttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctagttttggt 5800788  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||| ||||    
T  5800789 ccctgtaatttcaaattcctccattttt 5800816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 9267269 - 9267142
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |||||||  || ||||| ||||| |||| |||||||||||||||||| ||||||||||    
T  9267269 gtaatatcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattaagtccttgtaatttcagattcctcccacttttggt 9267170  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  9267169 ccttgtaatttcagattcctccactttt 9267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 20853990 - 20853863
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  || ||||| ||||| ||| ||||||||||||||||||| ||||| ||||    
T  20853990 gtaatttcagattcttccacttttggtccctcctttcatcaagtcaacataatctgcataaattatgtcactgtaatttcagattcctcccacttctggt 20853891  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||| | ||||||||||||||    
T  20853890 ctctgtaattttagattcctccactttt 20853863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 30500335 - 30500208
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| ||| || | ||| |||||| |||||||||||||||||||||| ||||||||||    
T  30500335 gtaatttcatattgttccacttttggtccctcctttcatcacgtcagcaaaatctacataaattacatccctgtaatttcagattcctcccacttttggt 30500236  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| |||||| |||||||    
T  30500235 ccatgtaatttcaaattccttcactttt 30500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 49986612 - 49986739
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| |||||||||| ||||||||||||  | || |  || ||||| |||||||||| |||||||||||||||||||||||||||||    
T  49986612 gtaatttcagattcttctacttttggtctctcctttcatcaatttaatagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggt 49986711  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  49986712 ccctgtaatttcagattcctccactttt 49986739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 14262330 - 14262203
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||| ||  || ||||| ||||||||||||||||||| ||||||||  |||||||| |    
T  14262330 gtaatttcatattgttccacttttagtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagattccttccacttttgat 14262231  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  14262230 ccctgtaatttcaaattcctccactttt 14262203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 52552982 - 52552859
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||||||||||||||||||| |    |||||    
T  52552982 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctccc----ttggt 52552887  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| |||||| |||||||    
T  52552886 ccctgtaatttcaaattccttcactttt 52552859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 35995974 - 35995845
Alignment:
Q  6 cagtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttg 105  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  ||  || ||||| |||||||||| ||||  || ||||||||| |||||||     
T  35995974 cagtaatttcagattcttccacttttggtcccttctttcatcacgtccgcagaatctgcataaattacgtccttgtatatttagattcctcccacttttt 35995875  T
Q  106 gtccctgtaatttcatattcctccactttt 135  Q
    |||||||||||||||| |||||||||||||    
T  35995874 gtccctgtaatttcatgttcctccactttt 35995845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 43572473 - 43572602
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcac---gtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcactttt 104  Q
    |||||||||||||||||||||||||||||||||||||||||    |||| ||  || |||| |||||||||||||||||||||| ||||||| |||||||    
T  43572473 gtaatttcagattcttccacttttggtccctcctttcatcatcaagtcagcagaatctgca-caattacgtccctgtaatttcatattcctcccactttt 43572571  T
Q  105 ggtccctgtaatttcatattcctccactttt 135  Q
    |||||||||||||||| ||| ||||||||||    
T  43572572 ggtccctgtaatttcaaattactccactttt 43572602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 556 - 648
Target Start/End: Complemental strand, 9105471 - 9105379
Alignment:
Q  556 gaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    ||||||||| |||||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  9105471 gaaaatatacaaaggaggtagctcatatacaatgtctagttaggttgcttgaagcacaagcaatgtaacaaactctagatcttatttgttaac 9105379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 47575566 - 47575439
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||| ||  || ||||| |||||  |||||||||||||| ||||||| || |||| ||    
T  47575566 gtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgcataaattatatccctgtaatttcaaattcctcccattttttgt 47575467  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  47575466 ccctgtaatttcaaattcctccactttt 47575439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 9697798 - 9697692
Alignment:
Q  542 ttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatt 641  Q
    |||||||| || | ||||||||| |||||||| | ||||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||    
T  9697798 ttattgattctcatgaaaatatacaaaggaggcagcttatatacaatgtctagctaagtttcttgaagcacaagcaatgttacaaactctagatcttatt 9697699  T
Q  642 tgctaac 648  Q
    |||||||    
T  9697698 tgctaac 9697692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 38283635 - 38283761
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||| ||  || | ||| | ||||||||||||||||| ||||||||| ||||||| |||    
T  38283635 taatttcatattgttccacttttgatccctcctttcatcacgtcagcagaatctacataagttacgtccctgtaatttaagattcctcccactttttgtc 38283734  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    | |||||||||| ||||||||||||||    
T  38283735 cgtgtaatttcaaattcctccactttt 38283761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 43547935 - 43547829
Alignment:
Q  542 ttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatt 641  Q
    |||||||| || | ||||||||| ||||||| || |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  43547935 ttattgattctgatgaaaatatacaaaggagatagcttatatacaatgtcttgctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatt 43547836  T
Q  642 tgctaac 648  Q
    || ||||    
T  43547835 tgttaac 43547829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 21847306 - 21847215
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    ||||| || |||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  21847306 aaaatgtacaaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatctgctaac 21847215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 21850396 - 21850305
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    ||||| || |||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  21850396 aaaatgtacaaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatctgctaac 21850305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 4204999 - 4204875
Alignment:
Q  11 atttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtccc 110  Q
    |||||||||||||||||||||| |||||| ||| |||||||||  |  || ||||| |||||| ||| | |||||||||||||||| |||| |||||| |    
T  4204999 atttcagattcttccacttttgatccctctttttatcacgtcagtagaatctgcataaattacatccatataatttcagattcctcccactattggtctc 4204900  T
Q  111 tgtaatttcatattcctccactttt 135  Q
    |||||||||||||| ||||||||||    
T  4204899 tgtaatttcatattactccactttt 4204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 17649304 - 17649222
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcaga 90  Q
    ||||||||||||| |||||| ||||||| ||||||| |||| |||||||  || ||||| |||||||||||||||||||||||    
T  17649304 gtaatttcagattattccacatttggtctctccttttatcaagtcaacagaatctgcataaattacgtccctgtaatttcaga 17649222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 43554764 - 43554673
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||| ||| |||||| || |||||||||||||  ||| |||||| ||| || ||||||||||| ||||||||||||||||||| ||||    
T  43554764 aaaatatacaaaagaggtagctcatatacaatgtcttactaagttgcttgaaacagaagcaatgtaataaactctagatcttatttgttaac 43554673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 4204792 - 4204837
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  4204792 gtaatttcagattcttccacttttggtccctcatttcaccacgtca 4204837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 43572685 - 43572640
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  43572685 gtaatttcagattcttccacttttggtccctcatttcaccacgtca 43572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 38283843 - 38283799
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    |||||||||||||||||||||||| |||||  |||||||||||||    
T  38283843 taatttcagattcttccacttttgatcccttatttcatcacgtca 38283799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 21633190 - 21633159
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  21633190 gtaatttcagattcttccacttttggtccctc 21633159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 35995762 - 35995793
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  35995762 gtaatttcagattcttccacttttggtccctc 35995793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 14162165 - 14162135
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  14162165 gtaatttcagattcttccacttttggtccct 14162135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 14262120 - 14262150
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  14262120 gtaatttcagattcttccacttttggtccct 14262150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 628
Target Start/End: Complemental strand, 756012 - 755955
Alignment:
Q  571 aggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaac 628  Q
    ||||| ||||||||||   ||||| ||||| ||| |||||||||||||||||||||||    
T  756012 aggtagcttatatacaccatctagttaggtagcttgaagcacaagcaatgtaacaaac 755955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 54167344 - 54167377
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  54167344 gttgcttgaagcacaagcaatgtaacaaactcta 54167377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 54171924 - 54171957
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  54171924 gttgcttgaagcacaagcaatgtaacaaactcta 54171957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 150 - 441
Target Start/End: Original strand, 11078 - 11373
Alignment:
Q  150 cggcggcggcgaggagagagaagcaccaccatggaaggagagagaggcacggtgaaggtgaag------gtgagcttcgcgagagaatagtgagaaaagt 243  Q
    ||||||||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||      |||||||||||||||||||||||||||||||    
T  11078 cggcggcggcgaggagagaaaagcaccaccgtggaaggagagag--gcacggtgaaggtgaaggcgaaggtgagcttcgcgagagaatagtgagaaaagt 11175  T
Q  244 gtgaaacgcgtgtgatgaaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatcta 343  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  11176 gtgaaactcgtgtgattaaatgacaaagaattgtgaaatttttgtattttaggtgttattttaaatccatcaaattttgcaaaagaaaaattcttatcta 11275  T
Q  344 aatgccttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcatta 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  11276 aatgccttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaatactccaaaaaattactttccctcatta 11373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 136 - 467
Target Start/End: Original strand, 26439572 - 26439913
Alignment:
Q  136 agagaagcaaatggcggcggcggcgaggagagagaagcaccaccatggaaggagagagaggcacggtgaaggtgaaggtgagcttcgcgagagaatagtg 235  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| | |||||| ||||    
T  26439572 agagaagcaaacggcggcggcggcgaggagagagaagcaccactgtggaaggagagagaggcacgatgaaggtgaaggtgagcttcac-agagaaaagtg 26439670  T
Q  236 -------------agaaaagtgtgaaacgcgtgtgatgaaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttg 322  Q
                 ||||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26439671 tgaaacgcgggagagaaaagtgagaaacgcgtg--atgaaatgacagagaattgtgaaatttttgtgttttaggtgttattttaaatccttcaaattttg 26439768  T
Q  323 caaaagagaaatttttatctaaatgccttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaa 422  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||    
T  26439769 caaaagaaaaattcttatctaaatgccttgaattttaaaaatgacttaaatatttttccaaacaatagaatttgggtcaagtcaatttaaattctctaaa 26439868  T
Q  423 aaattacattccctcattaaaatactctatccaaacacactctta 467  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  26439869 aaattacatttcctcattaaaatactctattcaaacacactctta 26439913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 235 - 470
Target Start/End: Complemental strand, 1991064 - 1990829
Alignment:
Q  235 gagaaaagtgtgaaacgcgtgtgatgaaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaat 334  Q
    |||||||||| |||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  1991064 gagaaaagtgagaaacgccggatatgaaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatcctttaaattttggaaaagagaaat 1990965  T
Q  335 ttttatctaaatgccttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattcc 434  Q
    | ||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1990964 tcttatcaaaatgctttgaattttaaaaatgacttaaatattttcccaaacaatagaatttgggtcaagtcaatttaaattctccaaaaaattacattcc 1990865  T
Q  435 ctcattaaaatactctatccaaacacactcttaggg 470  Q
    |||||||||||||| |||||||||||||||| ||||    
T  1990864 ctcattaaaatactttatccaaacacactctaaggg 1990829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 268 - 465
Target Start/End: Complemental strand, 20357224 - 20357027
Alignment:
Q  268 agagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatctaaatgccttgaattttaaaaatgac 367  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||     
T  20357224 agagaattctgaaattttggtattttaggtgttattttaaatccatcaaattttgcaaaagaaaaattcttatctaaatgccttgaattttaaaaatgag 20357125  T
Q  368 ttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactctatccaaacacactct 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  20357124 ttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaatatttcaaaaaattactttccctcattaaaatgctctatccaaacacactct 20357027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 38574262 - 38574135
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||    
T  38574262 gtaatttcatattcttccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattgcgtccctgtaatttcagattcctcccacttttggt 38574163  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||||||||||||||||||||    
T  38574162 ctctgtaatttcatattcctccactttt 38574135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 46046718 - 46046591
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||    
T  46046718 gtaatttcagattcttccacttttgatccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggt 46046619  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  46046618 ccctgtaatttcagattcctccactttt 46046591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 7819098 - 7819225
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |  || || |||||||||||||||| |||||||||||||||||| ||||||||||    
T  7819098 gtaatttcagattcttccacttttggttcctcctttcatcacgttagtaaaatctgcatcaattacgtccatgtaatttcagattcctcccacttttggt 7819197  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||||||||||||||||||    
T  7819198 ccatgtaatttcatattcctccactttt 7819225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 9516904 - 9516777
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| || | ||| |||||||||| |||||||||||||||||| ||||||||||    
T  9516904 gtaatttcagattcttctacttttggtccctcctttcatcaagtcaacaaaatctacataaattacgtccttgtaatttcagattcctcccacttttggt 9516805  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  9516804 ccctgtaatttcagattcctccactttt 9516777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 9396784 - 9396910
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||||||||||||||||||| |||||||| ||    
T  9396784 taatttcaaatttttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttgatc 9396883  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    |||||||||||||||||||||||||||    
T  9396884 cctgtaatttcatattcctccactttt 9396910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 18667375 - 18667500
Alignment:
Q  10 aatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtcc 109  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||  |||||||||||    
T  18667375 aatttcatattgttccacttttggtccctcctttcatcacgtcaacaaaatctgcataaattacgtccctgtaatttcagattcctccaacttttggtcc 18667474  T
Q  110 ctgtaatttcatattcctccactttt 135  Q
    ||||||||| | ||||||||||||||    
T  18667475 ctgtaattttaaattcctccactttt 18667500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 34064276 - 34064147
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||  || ||||| |||||||||| ||||||||||||||||||  |||||||||    
T  34064276 gtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcctcctacttttggt 34064177  T
Q  108 ccctgtaatttcatattcctccacttttag 137  Q
    ||||||||||||| ||||||||||||||||    
T  34064176 ccctgtaatttcagattcctccacttttag 34064147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 31944034 - 31944161
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| |  ||||||||||| |||| |||||||||||||||||| ||||||||||    
T  31944034 gtaatttcatattcttccacttttggtctctcctttcatcacgtcaacaaaacctgcatcaattatgtccatgtaatttcagattcctcccacttttggt 31944133  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  31944134 ccatgtaatttcagattcctccactttt 31944161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 9619064 - 9619190
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  || ||||| ||| ||||||||||||||||| ||||||| || |||||||    
T  9619064 gtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaat-acgtccctgtaatttcatattcctcccatttttggt 9619162  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  9619163 ccctgtaatttcagattcctccactttt 9619190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 15640799 - 15640926
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||| ||  |||||||| ||||||||||||||||||||||||||||| |||||||| |    
T  15640799 gtaatttcatattctttcacttttggtccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagattcctcccacttttgat 15640898  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  15640899 ccttgtaatttcagattcctccactttt 15640926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 3018096 - 3018223
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||| ||||||| || |||||||||| ||||||| ||||||||||    
T  3018096 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacggccttgtaatttcacattcctcccacttttggt 3018195  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    |||| |||||||| ||||||||||||||    
T  3018196 ccctataatttcaaattcctccactttt 3018223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 18713044 - 18713171
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  18713044 gtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcagattcctccctcttttggt 18713143  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||| ||||||    
T  18713144 ccatgtaatttcaaattcctcaactttt 18713171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 26252352 - 26252455
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  26252352 gtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt 26252451  T
Q  108 ccct 111  Q
    ||||    
T  26252452 ccct 26252455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 37013001 - 37012874
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| ||| || ||||| ||||||||||||||||||||| |||| ||  |||||||||    
T  37013001 gtaatttcatattcttccacttttggtcactcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcatattcttcctacttttggt 37012902  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  37012901 ccttgtaatttcaaattcctccactttt 37012874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 542 - 648
Target Start/End: Original strand, 50627889 - 50627995
Alignment:
Q  542 ttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatt 641  Q
    |||||||| || | |||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  50627889 ttattgattctgatgaaaatatataaaggaggtagcttatatacaatgtctagctaagttgcttgaagtacaagcaatgtaacaaactctagatcttatt 50627988  T
Q  642 tgctaac 648  Q
    |||||||    
T  50627989 tgctaac 50627995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 540 - 648
Target Start/End: Original strand, 10317008 - 10317116
Alignment:
Q  540 tgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatctta 639  Q
    ||||||| || |||| ||||||||| |||||||||| |||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  10317008 tgttattaattcttatgaaaatatacaaaggaggtagcttatatacaatgtctagttaagttgcttgaagcacaagcaatgtaacaaactctagatctta 10317107  T
Q  640 tttgctaac 648  Q
    |||||||||    
T  10317108 tttgctaac 10317116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 536 - 648
Target Start/End: Complemental strand, 35842963 - 35842851
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    |||||||||||||| |||| ||||||||| ||||||||||  |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  35842963 aaattgttattgatgcttatgaaaatatacaaaggaggtagtttatatacaatgtctaactaagttgcttgaagcacaagcattgtaacaaactctagat 35842864  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  35842863 cttatttgctaac 35842851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 536 - 647
Target Start/End: Original strand, 8892561 - 8892672
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||| || |||||| ||||||||||| ||||||||||||||| ||    
T  8892561 aaattgttattgatacttgtgaaaatatacaaaggaggtagcttatatacaatgtctagttaagttgcttgaagcacaagcgatgtaacaaactctatat 8892660  T
Q  636 cttatttgctaa 647  Q
    ||||||||||||    
T  8892661 cttatttgctaa 8892672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 31090355 - 31090228
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| |  || | ||| |||||||||| |||||||||||||| ||| ||||||||||    
T  31090355 gtaatttcagattcttctacttttggtccctcctttcatcaagtcaatagaatctacataaattacgtccttgtaatttcagatttctcccacttttggt 31090256  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||| ||||||||| ||||||||||||||    
T  31090255 ccccgtaatttcagattcctccactttt 31090228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 4355965 - 4356092
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||| | ||  || ||||| |||||||||| ||||||||||||||||||  |||||||||    
T  4355965 gtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcataaattacgtccttgtaatttcagattcctcctacttttggt 4356064  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  4356065 ccttgtaatttcaaattcctccactttt 4356092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 48580160 - 48580033
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||| |||||||||||||||||||||||||||| | | ||  |||||||| |||||||||| |||||||||| ||||||| ||||||||||    
T  48580160 gtaatttcatattgttccacttttggtccctcctttcatcaccttagcagaatatgcataaattacgtccttgtaatttcaaattcctcccacttttggt 48580061  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | || |||||||| ||||||||||||||    
T  48580060 ctctctaatttcaaattcctccactttt 48580033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 31670286 - 31670195
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  31670286 aaaatatacaaaggaggtagcttatatacaatgtctagctaagttgcttgaagcagaagcaatgtaacaaactctagatcttatctgctaac 31670195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 27186356 - 27186250
Alignment:
Q  542 ttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatt 641  Q
    |||||||| || | ||||||||| |||||||| | ||||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||    
T  27186356 ttattgattctcatgaaaatatacaaaggaggcagcttatatacaatgtctagctaagtttcttgaagcacaagcaatgttacaaactctagatcttatt 27186257  T
Q  642 tgctaac 648  Q
    |||||||    
T  27186256 tgctaac 27186250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 648
Target Start/End: Original strand, 43683621 - 43683727
Alignment:
Q  542 ttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatt 641  Q
    ||||| || |||| ||||||||| |||||| ||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||    
T  43683621 ttattaattcttatgaaaatatacaaaggatgtagcttatatacaatgtctagctaagttgcttgaagcacaaacaatgtaacaaactctatatcttatt 43683720  T
Q  642 tgctaac 648  Q
    |||||||    
T  43683721 tgctaac 43683727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 13132235 - 13132106
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||| ||  || ||||| |||||||||| |||||||||| ||| ||| ||||||||||    
T  13132235 gtaatttcatattcttccacttttggtcccttctttcatcaaatcagcagaatctgcataaattacgtccttgtaatttcatatttctcccacttttggt 13132136  T
Q  108 ccctgtaatttcatattcctccacttttag 137  Q
    || |||||||||| ||| ||||||||||||    
T  13132135 ccatgtaatttcagattactccacttttag 13132106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 3273706 - 3273828
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||  |  || ||||| |||||||||| |||||||||| ||||||| ||||||||||    
T  3273706 gtaatttcatattcttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtccttgtaatttcatattcctcccacttttggt 3273805  T
Q  108 ccctgtaatttcatattcctccac 131  Q
     |||||||||||| ||| ||||||    
T  3273806 -cctgtaatttcagattactccac 3273828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 53722203 - 53722113
Alignment:
Q  556 gaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgcta 646  Q
    |||||| || |||||||||| |||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  53722203 gaaaatgtacaaaggaggtagcttatatacaatatatagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatctgcta 53722113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 41947150 - 41947066
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagatt 92  Q
    ||||||||| ||| ||||||||||||||||| ||||||| | |||||||  || ||||| |||||||||||||||||||||||||    
T  41947150 gtaatttcatatttttccacttttggtccctgctttcataaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 41947066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 35376246 - 35376346
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| ||  ||  |||| ||||| |||| |||||   |||||||||| ||||||||||    
T  35376246 gtaattttagattcttccacttttggtctctcctttcatcacgtcagcagaatccgcataaattaagtccatgtaa---cagattcctcccacttttggt 35376342  T
Q  108 ccct 111  Q
    ||||    
T  35376343 ccct 35376346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 48259901 - 48259962
Alignment:
Q  74 gtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    |||| ||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  48259901 gtccatgtaatttcagattcctcctacttttggtccctgttatttcagattcctccactttt 48259962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 469
Target Start/End: Complemental strand, 16879057 - 16878957
Alignment:
Q  370 aaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaa-attacattccctcattaaaatactctatccaaacacactcttag 468  Q
    ||||||||||||||| | | ||||||||  |||||||||| |||| ||||||||| ||| |||| |||||||||||| |||| |  ||||||||| ||||    
T  16879057 aaatattttcccaaagagtagaatttggtccaagtcaattcaaatactccaaaaagattgcattacctcattaaaattctctgtttaaacacacttttag 16878958  T
Q  469 g 469  Q
    |    
T  16878957 g 16878957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 15641009 - 15640951
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcat 66  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||| ||  ||||||||    
T  15641009 gtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaatatgcat 15640951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 3273914 - 3273869
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||    
T  3273914 gtaatttcagattcttccacttttgatccctcatttcaccacgtca 3273869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 13132025 - 13132070
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||    
T  13132025 gtaatttcagattcttccacttttgatccctcatttcaccacgtca 13132070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 34064066 - 34064097
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  34064066 gtaatttcagattcttccacttttggtccctc 34064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 37012791 - 37012821
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  37012791 gtaatttcagattcttccacttttggtccct 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 3770999 - 3770966
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  3770999 gttgcttgaagcacaagcaatgtaacaaactcta 3770966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 7819308 - 7819263
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||| |||||||||||||||||||||||||| || || |||||||    
T  7819308 gtaatgtcagattcttccacttttggtccctcattccaccacgtca 7819263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 20357354 - 20357296
Alignment:
Q  156 cggcgaggagagagaagcaccaccatggaaggagagagaggcacggtgaaggtgaaggtga 216  Q
    ||||||| || ||||||||||||| | |||||||||||  |||| ||||||||||||||||    
T  20357354 cggcgagcagggagaagcaccaccgtagaaggagagag--gcacagtgaaggtgaaggtga 20357296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 35376422 - 35376377
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||||| |||||||||||||||||||| || || |||||||    
T  35376422 gtaatttcagaatcttccacttttggtccctcattccaccacgtca 35376377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 38574052 - 38574097
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||| |||||||||||||||||||||| || || |||||||    
T  38574052 gtaatttcatattcttccacttttggtccctcattccaccacgtca 38574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 44147180 - 44147147
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  44147180 gttgcttgaagcacaagcaatgtaacaaactcta 44147147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 44151715 - 44151682
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  44151715 gttgcttgaagcacaagcaatgtaacaaactcta 44151682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 31944244 - 31944196
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaaca 56  Q
    ||||||||| |||||||||||||| ||||||| || || ||||||||||    
T  31944244 gtaatttcatattcttccactttttgtccctcattccaccacgtcaaca 31944196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 3e-90; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 268 - 468
Target Start/End: Original strand, 9022189 - 9022389
Alignment:
Q  268 agagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatctaaatgccttgaattttaaaaatgac 367  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9022189 agagaattctgaaattttggtattttaggtgttattttaaatccatcaaattttgcaaaagagaaattcttatctaaatgccttgaattttaaaaatgac 9022288  T
Q  368 ttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactctatccaaacacactctta 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  9022289 ttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaatactccaaaaaattactttccctcattaaaatgctttatccaaacacactctta 9022388  T
Q  468 g 468  Q
    |    
T  9022389 g 9022389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 4907256 - 4907127
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |  || ||||| |||||||||||||||||||||||||||||  |||||||||    
T  4907256 gtaatttcagattcttccacttttggtccctcctttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagattcctcctacttttggt 4907157  T
Q  108 ccctgtaatttcatattcctccacttttag 137  Q
    ||||||||||||| |||| |||||||||||    
T  4907156 ccctgtaatttcagattcatccacttttag 4907127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 13229816 - 13229942
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||||||||| || |||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  13229816 gtaatttcatattcttccacttttgatcactcctttcatcaagtcaacataatctgcataaattacgtccctgtaatttcagattcctctcacttttggt 13229915  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
     |||||||||||| ||||||||||||||    
T  13229916 -cctgtaatttcagattcctccactttt 13229942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 17606392 - 17606519
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||  || || || ||||||||||||||||||||| ||||||| ||||||||||    
T  17606392 gtaatttcatattcttccacttttggtccctcatttcatcacgtcagcagaatctgtataaattacgtccctgtaatttcatattcctcccacttttggt 17606491  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  17606492 ccctgtaatttcaaattcctccactttt 17606519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 39826340 - 39826217
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||    ||||||||||||| ||| || |||||||||||||||| |||||||| ||||||||| |||||||| |    
T  39826340 gtaatttcagattcttccacttttggtcc----tttcatcacgtcagcaaaatctgcatcaattacgtccttgtaattttagattcctcccacttttgat 39826245  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||||||||||||||    
T  39826244 ccctgtaatttcatattcctccactttt 39826217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 536 - 648
Target Start/End: Original strand, 43591762 - 43591874
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    |||||||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  43591762 aaattgttattgatgcttatgaaaatatacaaaggaggtagcttatatacaatgtctagccaagttgcttgaagcacaagcaatgtaacaaactctagat 43591861  T
Q  636 cttatttgctaac 648  Q
     ||||||||||||    
T  43591862 tttatttgctaac 43591874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 43539431 - 43539558
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||||||||| ||||||||| |||||||| |    
T  43539431 gtaattttatattgttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagattcctcccacttttgct 43539530  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  43539531 ccctgtaatttcaaattcctccactttt 43539558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 48072045 - 48072172
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||| ||||||||||| |||||||||||||||| ||| ||  |||||||| ||||||||||||||||||||| ||||||| |||||||| |    
T  48072045 gtaatttcatattattccacttttgctccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaattcctcccacttttgat 48072144  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  48072145 ccctgtaatttcagattcctccactttt 48072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 52058302 - 52058178
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |   ||||| |||||||||||| | |||||||||||||| ||||||||||    
T  52058302 gtaatttcagattcttccacttttggtccctcctttcatcacgtcagaatc---tgcataaattacgtccctatgatttcagattcctcccacttttggt 52058206  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||||||| ||||||||||    
T  52058205 ccttgtaatttcatattactccactttt 52058178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 20995753 - 20995880
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| | |||||| |||||||||||||| |||||||||||||| ||  || ||||| ||||||||||||||||||||||||||||| ||||||| ||    
T  20995753 gtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttcgt 20995852  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||| ||||||||||    
T  20995853 ccctgtaatttcaaatttctccactttt 20995880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 30299315 - 30299442
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||| |||||||||||| |||||||  || | ||| ||||||||||||||||||||||||||||| ||||||| ||    
T  30299315 gtaatttcatattcttccacttttggtctctcctttcatcaagtcaacagaatctccataaattacgtccctgtaatttcagattcctcccacttttagt 30299414  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
     | |||||||||| ||||||||||||||    
T  30299415 tcttgtaatttcagattcctccactttt 30299442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 33628984 - 33628857
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||  || | ||| ||||| ||||||||||||||| ||||||| | ||||||||    
T  33628984 gtaatttcagattcttccacttttggtccctcctttaatcacgtcagcagaatctacataaattatgtccctgtaatttcaaattcctcccgcttttggt 33628885  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||| ||||||    
T  33628884 ccctgtaatttcagattcctctactttt 33628857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 39711156 - 39711283
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| ||  || ||||| |||||||||| |||||||||| ||||||| | ||||||||    
T  39711156 gtaatttcatattcttccacttttggtccctcctttaatcacgtcagcagaatctgcataaattacgtccttgtaatttcatattcctcccgcttttggt 39711255  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||  ||||||||||||||    
T  39711256 ccctgtaatttcggattcctccactttt 39711283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 42510307 - 42510181
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    ||||||||||||||||||||| |  |||||| ||||||||||||| ||  || ||||| ||||||  ||||||||||||||||||||| |||||||||||    
T  42510307 taatttcagattcttccacttgtattccctcatttcatcacgtcagcagaatctgcataaattacacccctgtaatttcagattcctcccacttttggtc 42510208  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    |||||||||||| ||||||||||||||    
T  42510207 cctgtaatttcagattcctccactttt 42510181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 8292890 - 8293014
Alignment:
Q  10 aatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtcc 109  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||| ||  || ||||| |||||||||||||||||||||||||||||  |||||||||||    
T  8292890 aatttcatattcttccacttttggttcctcttttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctacttttggtcc 8292989  T
Q  110 ctgtaatttcatattcctccacttt 134  Q
     |||||||| | |||||||||||||    
T  8292990 atgtaattttagattcctccacttt 8293014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 24467712 - 24467835
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |  || ||||| |||||||||  |||||||||| ||||||| ||||||||||    
T  24467712 gtaatttcagattcttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcccacttttggt 24467811  T
Q  108 ccctgtaatttcatattcctccac 131  Q
    ||||||||||||| ||| ||||||    
T  24467812 ccctgtaatttcagattactccac 24467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 18462369 - 18462492
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||  |  || ||||| |||||||||  |||||||||| ||||||| ||||||||||    
T  18462369 gtaatttcagattcttccatttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcccacttttggt 18462468  T
Q  108 ccctgtaatttcatattcctccac 131  Q
    |||| |||||||||||| ||||||    
T  18462469 ccctataatttcatattactccac 18462492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 640
Target Start/End: Complemental strand, 26311705 - 26311622
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||| |||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26311705 aaaatatacaaaggaagtagcttatatacaatatctagctaggttgcttgaagcacaagcaatgtaacaaactctagatcttat 26311622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 640
Target Start/End: Complemental strand, 26316196 - 26316113
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||| |||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26316196 aaaatatacaaaggaagtagcttatatacaatatctagctaggttgcttgaagcacaagcaatgtaacaaactctagatcttat 26316113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 34749399 - 34749297
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| ||  || ||||| |||||| |||||||||||||||||||||| ||||||||||    
T  34749399 gtaatttcagattcttccacttttggtacctcctttaatcacgtcagcagaatctgcataaattacatccctgtaatttcagattcctc-cacttttggt 34749301  T
Q  108 ccct 111  Q
    ||||    
T  34749300 ccct 34749297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 640
Target Start/End: Original strand, 16588440 - 16588523
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||    
T  16588440 aaaatatacaaaggaggtagcttatatacaatgtctagctaagttgcttaaaacacaagcaatgtaacaaactctagatcttat 16588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 566 - 640
Target Start/End: Complemental strand, 39794017 - 39793943
Alignment:
Q  566 aaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  39794017 aaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttat 39793943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 29696648 - 29696774
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||| ||| ||||||||||||| ||  ||  || ||||| ||||| |||||| |||||||| ||||||| ||| ||||||    
T  29696648 gtaatttcatattcttccactttttgtcactcctttcatcacatcggcagaatctgcataaattatgtccctataatttcatattcctcccac-tttggt 29696746  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||| ||||| ||||||||||||||    
T  29696747 ccctgtattttcagattcctccactttt 29696774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 39970939 - 39970813
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||| ||  ||  |||| ||||  ||||||| ||||| ||||||||| ||||||||||    
T  39970939 gtaattttagatccttccacttttggtcccttctttcatcacgtcagcagaatccgcataaattgtgtccctgaaattttagattcctcccacttttggt 39970840  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
     | |||||||||| |||| |||||||||    
T  39970839 -catgtaatttcagattcatccactttt 39970813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 215167 - 215079
Alignment:
Q  47 cacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    |||||| |||| || || || |||||||||  |||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||    
T  215167 cacgtcgacaaaatttgtataaattacgtcattgtaatttcagatttctctcactttcggtccgtgtaatttaagattcctccactttt 215079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 24467921 - 24467876
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  24467921 gtaatttcagattcttccacttttggtccctcatttcaccacgtca 24467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 18462578 - 18462530
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaaca 56  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  18462578 gtaatttcagattcttccacttttggtctctcatttcaccacgtcaaca 18462530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 7473876 - 7473922
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaa 54  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  7473876 gtaatttcatattcttccacttttggtccctcatttcaccacgtcaa 7473922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 39970730 - 39970788
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcat 66  Q
    |||||||||||||||||||||||||||||||| || || ||||||| ||| || |||||    
T  39970730 gtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatctgcat 39970788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 52058095 - 52058132
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttca 45  Q
    |||||||||||||||||||||||||||||||| |||||    
T  52058095 gtaatttcagattcttccacttttggtccctcatttca 52058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 7474002 - 7473959
Alignment:
Q  92 tcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||    
T  7474002 tcctcccacttttggtccttgtaatttcagattcctccactttt 7473959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 16294241 - 16294138
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||| ||||||||||||||||  ||| | || |||| ||  || | ||| |||||||||||||||||||  ||||||   ||||||||||    
T  16294241 gtaatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacataaattacgtccctgtaatttatgattccatccacttttggt 16294142  T
Q  108 ccct 111  Q
    ||||    
T  16294141 ccct 16294138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 29696852 - 29696821
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  29696852 gtaatttcagattcttccacttttggtccctc 29696821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 17606602 - 17606572
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  17606602 gtaatttcagattcttccacttttggtccct 17606572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 4907046 - 4907091
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||| |||||||||||||||||||||| || || |||||||    
T  4907046 gtaatttcatattcttccacttttggtccctcattccaccacgtca 4907091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 9022058 - 9022116
Alignment:
Q  156 cggcgaggagagagaagcaccaccatggaaggagagagaggcacggtgaaggtgaaggtga 216  Q
    |||||||||| |||||||||||||   ||||||||  |||||||| |||||||||||||||    
T  9022058 cggcgaggagggagaagcaccaccgcagaaggaga--gaggcacgatgaaggtgaaggtga 9022116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 42510204 - 42510167
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttca 45  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  42510204 gtaatttcagattcctccacttttggtccctcatttca 42510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 5e-76; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 261 - 465
Target Start/End: Complemental strand, 44609269 - 44609066
Alignment:
Q  261 aaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatctaaatgccttgaattttaa 360  Q
    ||||||||||||||| |  |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44609269 aaatgacagagaattttacaattttagtaatttaggtgttattttaaatccctcaaattttgcaaaagagaaattcttatctaaatgccttgaattttaa 44609170  T
Q  361 aaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactctatccaaacac 460  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||| |||||| || |||||||||||    
T  44609169 aaatgacttaaatattttcccaaacaatagaatttgggtcaagtcaatttaaatactcc-aaaaattactttccctcactaaaatgctttatccaaacac 44609071  T
Q  461 actct 465  Q
    |||||    
T  44609070 actct 44609066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 13145352 - 13145131
Alignment:
Q  235 gagaaaagtgtgaaacgcgtgtgat--gaaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaa 332  Q
    ||||| || |||||| |||||||||  ||||||| |||||||| |  || |||| ||  |||||||||||||||||  ||||||||||||||| |||||     
T  13145352 gagaagagagtgaaaggcgtgtgatatgaaatgagagagaattttacaaattttataacttaggtgttattttaaactcttcaaattttgcaagagaga- 13145254  T
Q  333 atttttatctaaatgccttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacatt 432  Q
     || ||||||||||   ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  13145253 -ttcttatctaaatctgttgaattttaaaaatgacttaaatatttttccaaacaatggaatatgggccaagtcaatttaaatactccaaaaaattacatt 13145155  T
Q  433 ccctcattaaaatactctatccaa 456  Q
    ||||||||||||| ||||||||||    
T  13145154 ccctcattaaaattctctatccaa 13145131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 43851950 - 43851831
Alignment:
Q  16 agattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtccctgtaa 115  Q
    |||||||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43851950 agattcttccactttttgtccctcctttcatcacgtcagcaaaatttgcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaa 43851851  T
Q  116 tttcatattcctccactttt 135  Q
    ||||||||||||||||||||    
T  43851850 tttcatattcctccactttt 43851831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 7689607 - 7689734
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||  ||| || |||||||||||||||| |||||||||||||||||| ||||||| ||    
T  7689607 gtaatttcagattcttccacttttggtccctcttttcatcacatcggcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttagt 7689706  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  7689707 ccctgtaatttcagattcctccactttt 7689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 10108454 - 10108581
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||| |||||||||| ||||||||||||||| || ||||||||||    
T  10108454 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcgtcccacttttggt 10108553  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  10108554 ccctgtaatttcaaattcctccactttt 10108581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 30789801 - 30789674
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| ||| || |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  30789801 gtaatttcagattcttccacttttggtccatcgtttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcatattcctcccacttttggt 30789702  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  30789701 ccttgtaatttcagattcctccactttt 30789674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 2583404 - 2583533
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||| ||  || ||||| |||||||||||||||||||||||||||||  |||||||||    
T  2583404 gtaatttcggattcttctacttttgatccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctacttttggt 2583503  T
Q  108 ccctgtaatttcatattcctccacttttag 137  Q
    ||||||||||||| ||||||||||||||||    
T  2583504 ccctgtaatttcaaattcctccacttttag 2583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 536 - 648
Target Start/End: Complemental strand, 33072134 - 33072022
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    |||||||||||||| || | ||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  33072134 aaattgttattgatgctaatgaaaatatacaaaggaggtagcttatatacaatgtctagctaagttgcttgaagcacaagcaatgtaacaaactctagat 33072035  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  33072034 cttatttgctaac 33072022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 14767801 - 14767674
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||| |||  ||||||| ||||||||||||||||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  14767801 gtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt 14767702  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  14767701 ccctgtaatttcaaattcctccactttt 14767674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 17623181 - 17623054
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| ||  || ||||| ||||| ||||||||||||||| ||||||| ||||||||||    
T  17623181 gtaatttcaaattcttccacttttggtcactcctttcatcacgtcagcagaatctgcataaattatgtccctgtaatttcaaattcctcccacttttggt 17623082  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  17623081 ccctgtaatttcagattcctccactttt 17623054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 42605837 - 42605964
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||  |  |||||||| ||||||||||||||||||||| ||||||| | ||||||||    
T  42605837 gtaatttcatattcttccacttttggtccctcctttaatcacgtcagtagaatatgcataaattacgtccctgtaatttcaaattcctcccgcttttggt 42605936  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||||| ||||||||||||||    
T  42605937 cgctgtaatttcagattcctccactttt 42605964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 330 - 461
Target Start/End: Complemental strand, 26378411 - 26378278
Alignment:
Q  330 gaaatttttatctaaatgccttgaattttaaaaa-tgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaa-att 427  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||| |||||||||| ||||||||||| ||| ||||||||||| || |||||| |||    
T  26378411 gaaattcttatctaaatgccttgaagtttaaaaaatgacttaaatatattcccaaacagtggaatttgggccaaatcaatttaaatacttcaaaaatatt 26378312  T
Q  428 acattccctcattaaaatactctatccaaacaca 461  Q
    ||||| |||||||||||| |||||||||||||||    
T  26378311 acatttcctcattaaaattctctatccaaacaca 26378278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 21148230 - 21148104
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||| ||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  21148230 gtaatttcatattcttccacttttagtccctcctttcatcatgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt 21148131  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
     ||| |||||||| ||||||||||||||    
T  21148130 -cctataatttcaaattcctccactttt 21148104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 42113277 - 42113151
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||| |||  | ||||| ||||| ||||||||||||||| ||||||| |||||||||||    
T  42113277 taatttcaaattcttccacttttgatccctcctttcatcatgtcagcaaattctgcataaattatgtccctgtaatttcatattcctcccacttttggtc 42113178  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    ||| |||||||||||| ||||||||||    
T  42113177 cctataatttcatattactccactttt 42113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 5554954 - 5555080
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| ||  || ||||| ||||||||||||| |||||||||||||||  | ||||||||    
T  5554954 taatttcatattcttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctggaatttcagattcctcctagttttggtc 5555053  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    |||||||||||  |||||| |||||||    
T  5555054 cctgtaatttcgaattccttcactttt 5555080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 551 - 648
Target Start/End: Original strand, 42234650 - 42234747
Alignment:
Q  551 cttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||| ||||||||| |||| |||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42234650 cttatgaaaatatacaaagaaggtagtttatatacaatgtctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatttgctaac 42234747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 26136769 - 26136896
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||| ||||| | ||||||||||||| |||| ||  || ||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  26136769 gtaatttcagattcttccaattttgattcctcctttcatcaagtcagcataatctgcataaattacgtccctgtaatttcagatttctcccacttttggt 26136868  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||| ||||| ||||||||| ||||    
T  26136869 ccttgtactttcagattcctccattttt 26136896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 28644757 - 28644666
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||| |||||||||| |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  28644757 aaaatatacaaaggaggtagcttatatacactgtctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatctgctaac 28644666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 14820378 - 14820505
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| ||  || ||||| ||||||||||||||||||||||||| |||  | ||||| |    
T  14820378 gtaatttcatattcttccacttttggtccctcctttcatcacatcagcagaatctgcataaattacgtccctgtaatttcagatttctcctagttttgct 14820477  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||| ||||| ||| ||||||| ||||||    
T  14820478 ccccgtaatctcaaattcctctactttt 14820505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 22494469 - 22494595
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||| ||||||||| || ||| ||||||||| ||  || ||||| ||||||||||||||||||| |||||||||  |||||||||    
T  22494469 gtaatttcatattcttccatttttggtccttc-tttaatcacgtcagcagaatctgcataaattacgtccctgtaattttagattcctcctacttttggt 22494567  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||| ||||||||| ||||||||||||||    
T  22494568 cccagtaatttcagattcctccactttt 22494595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 640
Target Start/End: Complemental strand, 38757186 - 38757103
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||| |||||||||| |||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  38757186 aaaatatacaaaggaggtagcttatatacaatatctggctaggttgcttgaatcacaagcaatgtaacaaactctagatcttat 38757103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 557 - 640
Target Start/End: Original strand, 30405782 - 30405865
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    ||||| || |||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  30405782 aaaatgtacaaaggaggtagcttatatacaatatctagctaggttgcttgaagtacaagcaatgtaacaaattctagatcttat 30405865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 557 - 640
Target Start/End: Original strand, 30410291 - 30410374
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    ||||| || |||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  30410291 aaaatgtacaaaggaggtagcttatatacaatatctagctaggttgcttgaagtacaagcaatgtaacaaaatctagatcttat 30410374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 43481608 - 43481481
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||||| ||||||  |||||| ||||||||| ||  || ||||| |||||||||| ||||||||||||||||||   || |||||    
T  43481608 gtaatttcaaattcttccactcttggtctttcctttaatcacgtcagcacaatctgcataaattacgtccttgtaatttcagattcctcctgctcttggt 43481509  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    |  |||||||| | ||||||||||||||    
T  43481508 ctttgtaattttagattcctccactttt 43481481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 21144799 - 21144705
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcactt 102  Q
    |||||||||||||| |||| |||| ||||||  ||| | ||||||| ||  || ||||| ||||||||||||||||||| ||||||| |||||||    
T  21144799 gtaatttcagattcctccatttttcgtcccttatttaaccacgtcagcagaatctgcataaattacgtccctgtaatttgagattccactcactt 21144705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 26533017 - 26532949
Alignment:
Q  68 aattacgtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttta 136  Q
    |||||| ||| |||||||||| | ||||| |||||||||| ||| |||||||| |||||||||||||||    
T  26533017 aattacatccttgtaatttcaaactcctcacacttttggttcctataatttcagattcctccactttta 26532949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 22848540 - 22848485
Alignment:
Q  80 gtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    ||||||||| |||| | |||||||||||| ||||||||||| ||||||||| ||||    
T  22848540 gtaatttcatattcttttcacttttggtctctgtaatttcaaattcctccattttt 22848485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 26136979 - 26136948
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  26136979 gtaatttcagattcttccacttttggtccctc 26136948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 577 - 628
Target Start/End: Original strand, 27435172 - 27435223
Alignment:
Q  577 cttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaac 628  Q
    |||||||||||| ||||  ||||||||| ||||||||||| |||||||||||    
T  27435172 cttatatacaatatctacttaggttgcttgaagcacaagctatgtaacaaac 27435223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 21148021 - 21148051
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  21148021 gtaatttcagattcttccacttttggtccct 21148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 197684 - 197717
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  197684 gttgcttgaagcacaagcaatgtaacaaactcta 197717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 202202 - 202235
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  202202 gttgcttgaagcacaagcaatgtaacaaactcta 202235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 312521 - 312554
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  312521 gttgcttgaagcacaagcaatgtaacaaactcta 312554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 317039 - 317072
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  317039 gttgcttgaagcacaagcaatgtaacaaactcta 317072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 7689817 - 7689772
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||||||||||||||||||| |||||| || || |||||||    
T  7689817 gtaatttcagattcttccacttttgatccctcattccaccacgtca 7689772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 17622971 - 17623016
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||| |||||||||||||||||||||||| || || |||||||    
T  17622971 gtaattttagattcttccacttttggtccctcattccaccacgtca 17623016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 22494570 - 22494603
Alignment:
Q  6 cagtaatttcagattcttccacttttggtccctc 39  Q
    |||||||||||||||| |||||||||||||||||    
T  22494570 cagtaatttcagattcctccacttttggtccctc 22494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 42113068 - 42113113
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||| |||||||| ||||||||||||||| ||||| |||||||    
T  42113068 gtaatttaagattctttcacttttggtccctcatttcaccacgtca 42113113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 43807485 - 43807518
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  43807485 gttgcttgaagcacaagcaatgtaacaaactcta 43807518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 43812044 - 43812077
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  43812044 gttgcttgaagcacaagcaatgtaacaaactcta 43812077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 44609500 - 44609442
Alignment:
Q  156 cggcgaggagagagaagcaccaccatggaaggagagagaggcacggtgaaggtgaaggtga 216  Q
    |||||||||| |||||||||||||   |||||||||||  ||||| |||||||||||||||    
T  44609500 cggcgaggagggagaagcaccaccgcagaaggagagag--gcacgatgaaggtgaaggtga 44609442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 1e-67; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 246 - 471
Target Start/End: Complemental strand, 1499819 - 1499593
Alignment:
Q  246 gaaacgcgtgtgatgaaa-tgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatctaa 344  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  1499819 gaaacgcgtgtgatgaaaatgacagagaattttgaaatttttgtaatttaggtgttattttaaatccttcaaattatgcaagagagaaattcttatctaa 1499720  T
Q  345 atgccttgaattttaaaaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaa 444  Q
    |||||||||||||||  |||||||||||||||||| |||||| || |||||||  |||||||||||||||  ||||||||| | ||||||||  || ||     
T  1499719 atgccttgaattttaggaatgacttaaatattttctcaaacagtgaaatttggtccaagtcaatttaaatagtccaaaaaaatgcattccctagttcaat 1499620  T
Q  445 tactctatccaaacacactcttagggt 471  Q
    | |||||||||||||||||| ||||||    
T  1499619 ttctctatccaaacacactcatagggt 1499593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 261 - 465
Target Start/End: Original strand, 1500653 - 1500857
Alignment:
Q  261 aaatgacagagaattgtgaaatttttgtattttaggtgttattttaaatccttcaaattttgcaaaagagaaatttttatctaaatgccttgaattttaa 360  Q
    |||||||| |||||| |||| |||||||| ||||||| ||||||||||||| || |||||||||| ||| ||||| ||||||||||||||| ||||||||    
T  1500653 aaatgacaaagaattttgaactttttgtaatttaggtattattttaaatccctctaattttgcaagagaaaaattcttatctaaatgccttaaattttaa 1500752  T
Q  361 aaatgacttaaatattttcccaaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactctatccaaacac 460  Q
    |||||||||||||| |||| |||||| || ||||||| |||||||||||||||| || | ||||||||||||| ||||||||||| | ||||| ||| ||    
T  1500753 aaatgacttaaatactttctcaaacagtgaaatttggttcaagtcaatttaaatacttcgaaaaattacattctctcattaaaattcactatctaaatac 1500852  T
Q  461 actct 465  Q
    |||||    
T  1500853 actct 1500857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 17850880 - 17850753
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||    
T  17850880 gtaatttcagattcttccacttttggtccctcttttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggt 17850781  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
     ||| |||||||| ||||||||||||||    
T  17850780 tcctttaatttcagattcctccactttt 17850753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 15106151 - 15106278
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| | | || ||||||||||| |||| |||||||||||||||||| ||||||||||    
T  15106151 gtaattttagattattccacttttggtccctcctttcatcacgtcagctaaatctgcatcaattaagtccttgtaatttcagattcctcccacttttggt 15106250  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  15106251 ccctgtaatttcagattcctccactttt 15106278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 22263485 - 22263358
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||| |||||||||||||||||||||||||||||  | |||||||    
T  22263485 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcataatctgcataaattacgtccctgtaatttcagattcctcctagttttggt 22263386  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  22263385 ccctgtaatttcaaattcctccactttt 22263358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 23806036 - 23806163
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||  ||  |||| ||||||||||||||||||||||||||||| ||||||||||    
T  23806036 gtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcataaattacgtccctgtaatttcagattcctcccacttttggt 23806135  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    |||| |||||||| ||||||||||||||    
T  23806136 ccctataatttcagattcctccactttt 23806163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 23854960 - 23854833
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||||||||||||||||||| |||||||| |    
T  23854960 gtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttgat 23854861  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  23854860 ccctgtaatttcaaattcctccactttt 23854833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 26135901 - 26136028
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||  || ||||| |||||||||| |||||||||||||||||||||||||||||    
T  26135901 gtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggt 26136000  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||| | ||||||||||||||    
T  26136001 ccttgtaattttagattcctccactttt 26136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 26560847 - 26560721
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| ||  || ||||| ||||||||||||||||||||||||||||| |||||||| ||    
T  26560847 taatttcatattcttccacttttggtctctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttgatc 26560748  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    |||||||||||| ||||||||||||||    
T  26560747 cctgtaatttcaaattcctccactttt 26560721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 39878186 - 39878313
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||| || ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  39878186 gtaatttcagattcttccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccctgtaatttcatattcctcccacttttggt 39878285  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    |||| |||||||| ||| ||||||||||    
T  39878286 ccctctaatttcagattactccactttt 39878313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 17463175 - 17463295
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||| |||| |||||||||||||||| |||||||| |||||||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  17463175 gtaatttcaggttctcccacttttggtccctcatttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcccacttttggt 17463274  T
Q  108 ccctgtaatttcatattcctc 128  Q
    ||||||||||| | |||||||    
T  17463275 ccctgtaattttagattcctc 17463295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 42671013 - 42670886
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| ||  || ||||| |||||||| ||||||||||||||||||||  | |||||||    
T  42671013 gtaatttcatatttttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcctagttttggt 42670914  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||| ||||    
T  42670913 ccctgtaatttcaaattcctccattttt 42670886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 13284702 - 13284575
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||| ||||||||||||||||| ||| | ||||||||||  || | ||| |||||||||| |||||||| ||||||||| ||||||||||    
T  13284702 gtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatctacataaattacgtccttgtaatttaagattcctcccacttttggt 13284603  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||| || |||||||    
T  13284602 ccctgtaatttcatatttcttcactttt 13284575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 19251554 - 19251681
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| ||  |||| ||| ||||| || | |||||||||| |||||||  ||||||| |    
T  19251554 gtaatttcatattcttccacttttggtccctcctttcatcacatcagcagaatatacataaattatgttcttgtaatttcaaattcctccaacttttgat 19251653  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||||||||||||||    
T  19251654 ccctgtaatttcatattcctccactttt 19251681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 26236211 - 26236313
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  26236211 gtaatttcagattctttcacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcatattcctc-cacttttggt 26236309  T
Q  108 ccct 111  Q
    ||||    
T  26236310 ccct 26236313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 20498832 - 20498956
Alignment:
Q  11 atttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtccc 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |  || ||||| |||||||||  | |||||||| ||||||| |||||||||||||    
T  20498832 atttcagattcttccacttttggtccctccttttatcacgtcagtagaatctgcataaattacgtcaatataatttcatattcctcccacttttggtccc 20498931  T
Q  111 tgtaatttcatattcctccactttt 135  Q
    |||||||||| ||  ||||||||||    
T  20498932 tgtaatttcagatcactccactttt 20498956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 648
Target Start/End: Original strand, 12999426 - 12999517
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||| ||||||| || ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  12999426 aaaatatacaaaggagatagcttatatacaatgtctagctaagttgcttgaagcacaagtaatgtaacaaactctagatcttatctgctaac 12999517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 33290133 - 33290260
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| | || ||||||||||||||||  ||| | ||||||| ||  || ||||| |||| |||||||||||||||||||||||| | ||||||||    
T  33290133 gtaatttcatactcctccacttttggtcccttatttaaccacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcccccttttggt 33290232  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| || |||||||||||    
T  33290233 ccctgtaatttcagatacctccactttt 33290260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 566 - 640
Target Start/End: Complemental strand, 8051025 - 8050951
Alignment:
Q  566 aaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8051025 aaaggaggcagcttatatacaatatctagctaggttgcttgaagcacaagcaatgtaacaaactctagatcttat 8050951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 566 - 640
Target Start/End: Complemental strand, 8055578 - 8055504
Alignment:
Q  566 aaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  8055578 aaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttat 8055504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 557 - 640
Target Start/End: Original strand, 6463400 - 6463483
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    ||||| || |||||||||| |||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  6463400 aaaatgtacaaaggaggtagcttatatacaatatctagctaggttgcttgaagcacaaataatgtaacaaactctagatcttat 6463483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 13254581 - 13254635
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatat 62  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  13254581 gtaatttcagattctttcacttttggttcctcctttcatcacgtcaacaaaatat 13254635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 648
Target Start/End: Original strand, 13270980 - 13271038
Alignment:
Q  590 tctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||| |||||| |||||| || |||||||||||||| |||||||||||| |||||    
T  13270980 tctagctaagttgcttgaagcaaaaacaatgtaacaaactttagatcttatttactaac 13271038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 13254730 - 13254693
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttca 45  Q
    |||||||||||||||||||||||||||||||| |||||    
T  13254730 gtaatttcagattcttccacttttggtccctcatttca 13254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 15106361 - 15106303
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcat 66  Q
    ||||||||||||||||||||||||| |||||| || || ||||||| ||| || |||||    
T  15106361 gtaatttcagattcttccacttttgatccctcattccaccacgtcagcaaaatctgcat 15106303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 23806246 - 23806188
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcat 66  Q
    ||||||||| |||||||||||||||||||||| || || ||||||| ||| || |||||    
T  23806246 gtaatttcatattcttccacttttggtccctcattccaccacgtcagcaaaatttgcat 23806188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 26560638 - 26560668
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  26560638 gtaatttcagattcttccacttttggtccct 26560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 136
Target Start/End: Complemental strand, 30959972 - 30959942
Alignment:
Q  106 gtccctgtaatttcatattcctccactttta 136  Q
    |||||||||||||||||||||||||||||||    
T  30959972 gtccctgtaatttcatattcctccactttta 30959942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 33290343 - 33290297
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaa 54  Q
    ||||||||| |||||||||||||||||||||  ||||| ||||||||    
T  33290343 gtaatttcatattcttccacttttggtccctaatttcaccacgtcaa 33290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 19251764 - 19251719
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||| ||||||||||||| |||||||| ||||| |||||||    
T  19251764 gtaatttcatattcttccactttcggtccctcatttcaccacgtca 19251719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 26236277 - 26236306
Alignment:
Q  106 gtccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||||||||||||||||    
T  26236277 gtccctgtaatttcatattcctccactttt 26236306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 30390667 - 30390619
Alignment:
Q  62 tgcatcaattacgtccctgtaatttcagattcctctcacttttggtccct 111  Q
    ||||| ||||| |||||||||||||||||||||| ||| |||||||||||    
T  30390667 tgcataaattatgtccctgtaatttcagattcct-tcatttttggtccct 30390619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 34548657 - 34548702
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  34548657 gtaatttcatattgttccacctttggtcactcctttcatcacgtca 34548702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 36670660 - 36670627
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  36670660 gttgcttgaagcacaagcaatgtaacaaactcta 36670627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 36675208 - 36675175
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  36675208 gttgcttgaagcacaagcaatgtaacaaactcta 36675175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 13284492 - 13284540
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaaca 56  Q
    ||||||||| |||||||||||||| ||||||| ||||| |||| |||||    
T  13284492 gtaatttcatattcttccacttttagtccctcatttcaccacgacaaca 13284540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 7e-54; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 28218457 - 28218330
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28218457 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcccacttttggt 28218358  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||| ||||||||||    
T  28218357 ccctgtaatttcagattactccactttt 28218330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 41600252 - 41600125
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||    
T  41600252 gtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggt 41600153  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  41600152 ccctgtaatttcagattcctccactttt 41600125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 12006834 - 12006707
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||    
T  12006834 gtaatttcagattcttccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcccacttttggt 12006735  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||||| ||||||||||||||    
T  12006734 cactgtaatttcagattcctccactttt 12006707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 20419830 - 20419703
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| || | ||| |||||||||| |||||||||||||||||| ||||||||||    
T  20419830 gtaatttcagattcttctacttttggtccctcctttcatcaagtcaacaaaatcttcataaattacgtccttgtaatttcagattcctcccacttttggt 20419731  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||||||||||||||    
T  20419730 ccctgtaatttcatattcctccactttt 20419703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 23704745 - 23704872
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |  || ||||| |||||| |||||||||||||||||||||| ||||||||||    
T  23704745 gtaatttcagattcttccacttttggtccctcctttcatcaagtcaatagaatctgcataaattacttccctgtaatttcagattcctcccacttttggt 23704844  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  23704845 ccctgtaatttcagattcctccactttt 23704872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 48672573 - 48672446
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||| || |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  48672573 gtaatttcagattcttccacttttggtccctcctttcatcacgttagcaaaatctgcatcaattacgtccttgtaatttcaaattcctcccacttttggt 48672474  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  48672473 ccttgtaatttcagattcctccactttt 48672446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 536 - 648
Target Start/End: Original strand, 7466464 - 7466576
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  7466464 aaattgttattgatacttatgaaaatatacaaaggaggtagcttatatacaatgtctagctaagttgcttgaagcacaaacaatgtaacaaactctagat 7466563  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  7466564 cttatttgctaac 7466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 20458985 - 20458858
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||  || ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  20458985 gtaatttcagattcttccacttttggtccctcctttgatcaagtcaacagaatttgcataaattacgtccctgtaatttcagattcctcccgcttttggt 20458886  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  20458885 ccttgtaatttcagattcctccactttt 20458858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 31851533 - 31851406
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||| ||  |||||||| |||||||||||||||||||||||||||||||| ||||| |    
T  31851533 gtaatttcatattcttccacttttggtctctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagattcctctcaattttgat 31851434  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||| ||||||||||    
T  31851433 ccctgtaatttcatatttctccactttt 31851406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 6465938 - 6466065
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |  || ||||| ||||| ||||||||||||||| ||||||| |||||||| |    
T  6465938 gtaatttcagattcttccacttttggtccctcctttcatcacgtcagaagaatctgcataaattatgtccctgtaatttcaaattcctcccacttttgat 6466037  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||| ||||||||||    
T  6466038 ccctgtaatttcatattactccactttt 6466065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 20963788 - 20963662
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||  || ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  20963788 gtaatttcagattctttcacttttggtcc-tcctttcatcacgtcaacataatttgcataaattacgtccctgtaatttcatattcctcccacttttggt 20963690  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || ||||||||||||||| |||||||||    
T  20963689 ccttgtaatttcatattcttccactttt 20963662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 10409458 - 10409585
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| |||||| |||||| |||||||||| ||| ||| || |||||||||||||||| ||||||||||||||||||  |||||||||    
T  10409458 gtaatttcagattcttctacttttagtcccttctttcatcacttcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcctacttttggt 10409557  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  10409558 ccttgtaatttcagattcctccactttt 10409585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 542 - 648
Target Start/End: Original strand, 733614 - 733719
Alignment:
Q  542 ttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatt 641  Q
    |||||||| |||| |||| |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  733614 ttattgat-cttatgaaagtatacaaaggaggtagcttatatacaatgtctagctaagttgctcgaagcacaagcaatgtaacaaactctagatcttatt 733712  T
Q  642 tgctaac 648  Q
    |||||||    
T  733713 tgctaac 733719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 38880018 - 38879896
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||  || ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  38880018 gtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctgcataaattacgtccctgtaatttcatattcctcccacttttggt 38879919  T
Q  108 ccctgtaatttcatattcctcca 130  Q
    | || |||||||| |||||||||    
T  38879918 ctctataatttcagattcctcca 38879896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 1250499 - 1250372
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |  || ||||| ||||||||||||||||||||| |||||||  | ||||||||    
T  1250499 taatttcatattcttccacttttggtccctcctttcatcacgtcagaagaatctgcataaattacgtccctgtaatttcaaattcctcctatttttggtc 1250400  T
Q  109 cctgtaatttcatattcctccactttta 136  Q
     |||||||| ||||||||||||||||||    
T  1250399 actgtaattccatattcctccactttta 1250372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 539 - 648
Target Start/End: Complemental strand, 35705848 - 35705739
Alignment:
Q  539 ttgttattgatacttacgaaaatatataaagga-ggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatct 637  Q
    |||||||||||||||| ||||||||| |||| | |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  35705848 ttgttattgatacttatgaaaatatacaaagaaaggtagcttatatacaatgtctagct-ggttgcttgaagcacaagcaatgtaacaaactctagatct 35705750  T
Q  638 tatttgctaac 648  Q
    |||||||||||    
T  35705749 tatttgctaac 35705739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 22901351 - 22901260
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  22901351 aaaatatacaaaggaggtagcttatatacaatgtctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatctgctaac 22901260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 23383794 - 23383667
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||  || ||||| || ||||||| |||||||| ||||||||| ||||||||||    
T  23383794 gtaatttcatattcttccacctttggtccctcctttcatcaagtcaacagaatctgcataaactacgtccttgtaattttagattcctcccacttttggt 23383695  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| |||||| |||||||    
T  23383694 ccttgtaatttcaaattccttcactttt 23383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 7658263 - 7658135
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| ||| || ||||| ||||| ||||||||||||||| ||||||| ||||||||||    
T  7658263 gtaatttaagattcttccacttttggtctctcctttcatcacgtcagcaaaatctgcataaattatgtccctgtaatttcatattcctcccacttttggt 7658164  T
Q  108 ccctgtaatttcatattcctccacttttag 137  Q
     ||| |||||||| |||| || ||||||||    
T  7658163 -cctttaatttcagattcatctacttttag 7658135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 25772625 - 25772523
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||  || ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  25772625 gtaatttcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctc-cacttttggt 25772527  T
Q  108 ccct 111  Q
    ||||    
T  25772526 ccct 25772523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 48648523 - 48648421
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||| || |||||||    
T  48648523 gtaattttagattcttccacttctggtccctcctttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctc-caattttggt 48648425  T
Q  108 ccct 111  Q
    ||||    
T  48648424 ccct 48648421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 553 - 648
Target Start/End: Original strand, 47419536 - 47419631
Alignment:
Q  553 tacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||| |||| |||||||    
T  47419536 tacgaaaatatacaaaggaggtagcttatatacaatgtctagctaagttgcttgaaacacaaacaatgtaacaaactctagatattatctgctaac 47419631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 640
Target Start/End: Complemental strand, 27757041 - 27756958
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    ||||| || |||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  27757041 aaaatgtacaaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttat 27756958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 640
Target Start/End: Complemental strand, 27761592 - 27761509
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    ||||| || |||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  27761592 aaaatgtacaaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttat 27761509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 44817128 - 44817002
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| |||||| ||||||||||||||| |||||||| ||||| |  || ||||| |||||||| | |||| ||||| ||||||  |||||||||||    
T  44817128 taatttcatattctttcacttttggtccctcttttcatcaagtcaatagaatctgcataaattacgtacatgtagtttcaaattccttccacttttggtc 44817029  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    | |||||||||| ||||||||||||||    
T  44817028 cttgtaatttcagattcctccactttt 44817002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 24194941 - 24195002
Alignment:
Q  74 gtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  24194941 gtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccactttt 24195002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 8482532 - 8482644
Alignment:
Q  352 gaattttaaaaatgacttaaatattttcc-caaacaatggaatttgggtcaagtcaatttaaattctccaaaaaattacattccctcattaaaatactct 450  Q
    |||||||||||||||||||||||||||   ||||   |||||||||| |||  ||||||||||| || |||||||||||||||| | | |||||| ||||    
T  8482532 gaattttaaaaatgacttaaatatttttttcaaaacgtggaatttggttcagatcaatttaaatacttcaaaaaattacattccttaaataaaattctct 8482631  T
Q  451 atccaaacacact 463  Q
    |||||||||||||    
T  8482632 atccaaacacact 8482644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 7658055 - 7658115
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatca 68  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||| ||| || |||||||    
T  7658055 gtaatttcaaattcttacacttttggtccatcctttcatcacgtcagcaaaatctgcatca 7658115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 33162638 - 33162746
Alignment:
Q  27 cttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcc 126  Q
    |||||| ||||| ||||||||||||||  |  || || || |||||||| | |||||||||| ||||||  |||||||||||| |||||||||| ||| |    
T  33162638 cttttgatcccttctttcatcacgtcagtagaatctgtataaattacgttcttgtaatttcaaattccttccacttttggtccgtgtaatttcagattac 33162737  T
Q  127 tccactttt 135  Q
    | |||||||    
T  33162738 ttcactttt 33162746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 28218263 - 28218308
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    |||||||||||||||||||||||||||||||| || || |||||||    
T  28218263 gtaatttcagattcttccacttttggtccctcattccaccacgtca 28218308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 16995283 - 16995347
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaatta 72  Q
    |||||||||||||||||||||||||||||| | || || ||||||| ||  || |||||||||||    
T  16995283 gtaatttcagattcttccacttttggtcccacattccaccacgtcagcagaatctgcatcaatta 16995347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 20458775 - 20458806
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  20458775 gtaatttcagattcttccacttttggtccctc 20458806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 24195090 - 24195047
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgt 51  Q
    ||||||||| |||||||||||||||||||||| || ||||||||    
T  24195090 gtaatttcatattcttccacttttggtccctcattccatcacgt 24195047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 44816919 - 44816950
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  44816919 gtaatttcagattcttccacttttggtccctc 44816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 7940083 - 7940116
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  7940083 gttgcttgaagcacaagcaatgtaacaaactcta 7940116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 7944636 - 7944669
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  7944636 gttgcttgaagcacaagcaatgtaacaaactcta 7944669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 24194980 - 24195017
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcat 46  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  24194980 taatttcagattcctccacttttggtccctcatttcat 24195017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 48672363 - 48672408
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||||||||||||||||||| |||||| || || |||||||    
T  48672363 gtaatttcagattcttccacttttgatccctcattccaccacgtca 48672408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 7126211 - 7126084
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  7126211 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcatattcctcccacttttggt 7126112  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  7126111 ccctgtaatttcaaattcctccactttt 7126084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 536 - 648
Target Start/End: Complemental strand, 36632518 - 36632406
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    |||||||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  36632518 aaattgttattgatgcttatgaaaatatacaaaggaggtagcttatatacaatgtctagctaagttgcttgaagcacaagcaatgtaacaaactctagat 36632419  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  36632418 cttatttgctaac 36632406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 24837463 - 24837336
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||| ||||||| ||||||||||||||| |||||||  || ||||| |||||||||| |||||||||||||||||||||||||||||    
T  24837463 gtaatttcaaattcttctacttttgctccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctctcacttttggt 24837364  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  24837363 ccctgtaatttcagattcctccactttt 24837336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 994040 - 993914
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||||  || || || ||||||||||||||||||||||||||||| ||||||||||    
T  994040 gtaattgcagattcttccacttttggtccctccttttatcatgtcaacagaatctgtataaattacgtccctgtaatttcagattcctcccacttttggt 993941  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    |||||||| |||||||||||||||||||    
T  993940 ccctgtaa-ttcatattcctccactttt 993914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 20709506 - 20709379
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||| |||| |||||||||||| ||| ||  |||||||| |||||| |||||||||||||||||||||| |||||||| |    
T  20709506 gtaatttcatattcttccactttttgtccttcctttcatcacatcagcagaatatgcataaattacatccctgtaatttcagattcctcccacttttgat 20709407  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||||||||||||||||||    
T  20709406 ccctgtaatttcatattcctccactttt 20709379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 31799934 - 31799807
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| ||  || ||||| |||||||||||| |||||||||||||||| ||||||||||    
T  31799934 gtaatttcagattcttcctcttttgatccctcctttcatcacgtcagcagaatttgcataaattacgtccctttaatttcagattcctcccacttttggt 31799835  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| | ||||||||||||    
T  31799834 ccctgtaatttcaaaatcctccactttt 31799807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 4919284 - 4919157
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||||  |||||||| |||||||||| |||||||||| |||||||  |||||||||    
T  4919284 gtaatttcagattcttctacttttgatccctcctttcatcaagtcaacagaatatgcataaattacgtccttgtaatttcatattcctccaacttttggt 4919185  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||||| ||||||||||||||    
T  4919184 cactgtaatttcaaattcctccactttt 4919157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 14411781 - 14411884
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  14411781 gtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcagattcctcccacttttggt 14411880  T
Q  108 ccct 111  Q
    ||||    
T  14411881 ccct 14411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 17762366 - 17762493
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | ||  || ||||| ||||||||||||||||||||| ||||||| | ||||||||    
T  17762366 gtaatttcagattcttccacttttggtccctcctttaatcacgtaagcagaatctgcataaattacgtccctgtaatttcatattcctcccgcttttggt 17762465  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||| | ||||||||||||||    
T  17762466 ccctgtaattttagattcctccactttt 17762493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 536 - 648
Target Start/End: Complemental strand, 19502525 - 19502413
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||| ||    
T  19502525 aaattgttattgattcttatgaaaatatataaaggaggtagcttatatacaatgtttagctaagttgcttgaagcacaaacaatgtaacaaactctatat 19502426  T
Q  636 cttatttgctaac 648  Q
    ||||||| |||||    
T  19502425 cttattttctaac 19502413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 14143985 - 14144112
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||  |  || ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  14143985 gtaatttcatattcttccacttttggtacctcatttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagattccttccacttttggt 14144084  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||||||||||||||    
T  14144085 ccatgtaatttcaaattcctccactttt 14144112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 29444890 - 29445009
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||  || ||||| |||||||||||||||||||||||||||||  | |||||||    
T  29444890 gtaatttcatattcttctacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcctagttttggt 29444989  T
Q  108 ccctgtaatttcatattcct 127  Q
    ||||||||||||| ||||||    
T  29444990 ccctgtaatttcaaattcct 29445009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 522 - 647
Target Start/End: Original strand, 20830256 - 20830380
Alignment:
Q  522 gaattgaaaaatgaaaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgt 621  Q
    |||||||||| ||| |||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||| || |||||| ||||||||||||||||    
T  20830256 gaattgaaaagtgagaattgttattgatactgatgaaaatatataa-gtaggtagcttatatacaatgtctagttaagttgcttgaagcacaagcaatgt 20830354  T
Q  622 aacaaactctagatcttatttgctaa 647  Q
    ||||||| || |||||||||||||||    
T  20830355 aacaaacacttgatcttatttgctaa 20830380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 536 - 648
Target Start/End: Original strand, 32485926 - 32486038
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    ||||||||||||||  | | |||||||||||||||||||| ||||||||||||||||||||| |  | | ||||||||||||||||||||||||||||||    
T  32485926 aaattgttattgattttaatgaaaatatataaaggaggtagcttatatacaatgtctagctaaggaggttgaagcacaagcaatgtaacaaactctagat 32486025  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  32486026 cttatttgctaac 32486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 543 - 648
Target Start/End: Original strand, 26336753 - 26336858
Alignment:
Q  543 tattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttattt 642  Q
    ||||||| || | ||||||||| |||||||||| |||||||||||||||||| || |||||| ||||||||| |||||||||||||||||||||||||||    
T  26336753 tattgattctaatgaaaatatacaaaggaggtagcttatatacaatgtctagttaagttgcttgaagcacaaacaatgtaacaaactctagatcttattt 26336852  T
Q  643 gctaac 648  Q
    ||||||    
T  26336853 gctaac 26336858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 41001646 - 41001518
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  |  | ||| ||||| ||| |||||||||||  |||||| ||||| |||||    
T  41001646 taatttcagattcttccacttttggtccctcctttcatcaagtcaacagaacctacataaattatgtcactgtaatttcatcttcctcccacttctggtc 41001547  T
Q  109 cctgtaatttcatattcctccacttttag 137  Q
    |||||||||||| ||||||||| ||||||    
T  41001546 cctgtaatttcagattcctccatttttag 41001518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 6817415 - 6817289
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||| ||  |||||||| ||||||||||||||||||||| ||||||| |||||||| |    
T  6817415 gtaatttcatattcttccacttttggtcactcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaattcctcccacttttgat 6817316  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
      ||||||||||| ||||||||| ||||    
T  6817315 -tctgtaatttcagattcctccattttt 6817289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 24074387 - 24074513
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||| |||||||||||  ||||||||||||| || |||||||| |    
T  24074387 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccccataatttcagattcatcccacttttgat 24074486  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
     |||||||||||| ||| ||||||||||    
T  24074487 -cctgtaatttcaaatttctccactttt 24074513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 24650993 - 24650867
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||  ||  |||| |||||| |||||||||||||| ||| ||| ||| ||||||    
T  24650993 gtaattttagattcttccacttttgatccctcctttcatcacgtcagcagaatccgcataaattacatccctgtaatttcatatttctcccac-tttggt 24650895  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||| ||||    
T  24650894 ccctgtaatttcagattcctccattttt 24650867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 553 - 640
Target Start/End: Complemental strand, 30695492 - 30695405
Alignment:
Q  553 tacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    ||||||||| || |||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  30695492 tacgaaaatgtacaaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttat 30695405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 22571371 - 22571244
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||   ||||| |||||| ||||| ||||||||||| || ||||| |||||||||||||||||||||| ||||||  || ||||||    
T  22571371 gtaatttcaaattcttctcgttttgctccctcatttcaccacgtcaacaaaatctgcataaattacgtccctgtaatttcaggttcctcctacatttggt 22571272  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    |||| ||||||||||||| ||| |||||    
T  22571271 ccctctaatttcatattcatccgctttt 22571244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 27159251 - 27159148
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| | ||||||||| ||||||||||| |||||||||||||| ||  || ||||| ||||||||||||||||||||||||||||| |||||||| |    
T  27159251 gtaattttatattcttccatttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcccacttttgat 27159152  T
Q  108 ccct 111  Q
    ||||    
T  27159151 ccct 27159148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 18336552 - 18336637
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattc 93  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||| ||  || ||||| ||||||||||||||||||||||||||    
T  18336552 gtaatttcagattcttccgcttttgatccctcctttcatcacatcagcagaatttgcataaattacgtccctgtaatttcagattc 18336637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 578 - 650
Target Start/End: Complemental strand, 43385126 - 43385054
Alignment:
Q  578 ttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaactt 650  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||| ||||||||||||||    
T  43385126 ttatatacaatgtctagctaagttgcttgaagcacaaacaatgtaacaaaccctagattttatttgctaactt 43385054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 640
Target Start/End: Original strand, 40367572 - 40367657
Alignment:
Q  556 gaaaatatataaaggaggtaacttatatacaatgtctagctaggtt-gctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||| || |||||||||| |||||||||||| |||| | | ||| ||| |||||||||||||||||||||||||||||||||||    
T  40367572 gaaaatgtacaaaggaggtagcttatatacaatatctaaccaagtttgcttgaagcacaagcaatgtaacaaactctagatcttat 40367657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 6817206 - 6817251
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  6817206 gtaatttcagattcttccacttttggtccctcatttcaccacgtca 6817251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 23979046 - 23979109
Alignment:
Q  68 aattacgtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccac 131  Q
    |||||||||| |||||||||| ||| ||| |||||||||||||| |||||||| ||| ||||||    
T  23979046 aattacgtccttgtaatttcatatttctcccacttttggtccctttaatttcagattactccac 23979109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22571161 - 22571207
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaa 54  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  22571161 gtaatttcatattcttccacttttggtccctcatttcaccacgtcaa 22571207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 20709296 - 20709341
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||    
T  20709296 gtaatttcaaattcttccacttttggtccctcatttcaccacgtca 20709341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 23979195 - 23979150
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||    
T  23979195 gtaatttcaaattcttccacttttggtccctcatttcaccacgtca 23979150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 17762575 - 17762545
Alignment:
Q  9 taatttcagattcttccacttttggtccctc 39  Q
    |||||||||||||||||||||||||||||||    
T  17762575 taatttcagattcttccacttttggtccctc 17762545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 18336637 - 18336674
Alignment:
Q  73 cgtccctgtaatttcagattcctctcacttttggtccct 111  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  18336637 cgtccctgtaatttcagattcctc-cacttttggtccct 18336674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 27159074 - 27159104
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  27159074 gtaatttcagattcttccacttttggtccct 27159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 29445100 - 29445070
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  29445100 gtaatttcagattcttccacttttggtccct 29445070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 31799724 - 31799754
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  31799724 gtaatttcagattcttccacttttggtccct 31799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 7099374 - 7099407
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  7099374 gttgcttgaagcacaagcaatgtaacaaactcta 7099407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 7103943 - 7103976
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  7103943 gttgcttgaagcacaagcaatgtaacaaactcta 7103976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 7126002 - 7126031
Alignment:
Q  9 taatttcagattcttccacttttggtccct 38  Q
    ||||||||||||||||||||||||||||||    
T  7126002 taatttcagattcttccacttttggtccct 7126031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 12018888 - 12018855
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  12018888 gttgcttgaagcacaagcaatgtaacaaactcta 12018855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 12023446 - 12023413
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  12023446 gttgcttgaagcacaagcaatgtaacaaactcta 12023413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 16794265 - 16794232
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  16794265 gttgcttgaagcacaagcaatgtaacaaactcta 16794232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 16798826 - 16798793
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  16798826 gttgcttgaagcacaagcaatgtaacaaactcta 16798793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 37658878 - 37658845
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  37658878 gttgcttgaagcacaagcaatgtaacaaactcta 37658845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 37682182 - 37682149
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  37682182 gttgcttgaagcacaagcaatgtaacaaactcta 37682149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 90; Significance: 4e-43; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 8413 - 8534
Alignment:
Q  14 tcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtccctgt 113  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  8413 tcagattctttcacttttggtctctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcccacttttggtccttgt 8512  T
Q  114 aatttcatattcctccactttt 135  Q
    ||||||| ||||||||| ||||    
T  8513 aatttcagattcctccattttt 8534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 8616 - 8571
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||| |||||||||||||||||||||||| || || |||||||    
T  8616 gtaattttagattcttccacttttggtccctcattccaccacgtca 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 1494 - 1621
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  || | ||| |||||||||||| |||||||||||||||| ||||||||||    
T  1494 gtaatttcagattcttccacttttggtccctcctttcatcacgtcagcagaatctacataaattacgtccctataatttcagattcctcccacttttggt 1593  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||||| ||| ||||||||||    
T  1594 ccttgtaatttcagattactccactttt 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 1704 - 1673
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctc 39  Q
    ||||||||||||||||||||||||||||||||    
T  1704 gtaatttcagattcttccacttttggtccctc 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 4647 - 4774
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| ||||||||| |||||||||||||||||| |||| |||||||  || ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  4647 gtaatttgagattcttctacttttggtccctccttttatcaagtcaacagaatctgcataaattacgtccgtgtaatttcagattcctcccacttttggt 4746  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||||||||    
T  4747 ccctgtaatttcagattcctccactttt 4774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 4163 - 4036
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||| || |||||||||||||||||||||||||| ||  || ||||| ||||| ||| ||||||||||||||||||| ||||||||||    
T  4163 gtaatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgcataaattatgtctctgtaatttcagattcctcccacttttggt 4064  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||||||||||||||||||||    
T  4063 cactgtaatttcatattcctccactttt 4036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 24732022 - 24732149
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||  || | ||| |||||||||| |||||||||||||||||| ||||||||||    
T  24732022 gtaatttcagattcttctacttttggtccctcctttcatcaagtcaacataatctacataaattacgtccttgtaatttcagattcctcccacttttggt 24732121  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    |||| |||||||| ||||||||||||||    
T  24732122 ccctataatttcagattcctccactttt 24732149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 9481266 - 9481393
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||  || ||||| |||||||| ||||||||||||||||||||  | |||||||    
T  9481266 gtaatttcatattcttccaattttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcctagttttggt 9481365  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||||| ||||    
T  9481366 ccctgtaatttcaaattcctccattttt 9481393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 536 - 648
Target Start/End: Original strand, 17886789 - 17886901
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    |||||| |||| || |||| ||||| ||| |||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  17886789 aaattgctatttattcttatgaaaaaatacaaaggaggtagcttatatacaatgtctagctaagctgcttgaagcacaagcaatgtaacaaactctagat 17886888  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  17886889 cttatttgctaac 17886901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 536 - 648
Target Start/End: Original strand, 17895664 - 17895776
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    ||||||||||| || |||| ||||| ||| |||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||    
T  17895664 aaattgttatttattcttatgaaaaaatacaaaggaggtagcttatatacaatgcctagctaagttgcttgaagcacaagcaatgtaacaaattctagat 17895763  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  17895764 cttatttgctaac 17895776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 2299603 - 2299477
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||  || ||||| |||||||||||||| |||||||||||||| ||||||||||    
T  2299603 gtaatttcagattcttccactttttatccctcctttcatcaagtcaacagaatctgcataaattacgtccctgt-atttcagattcctcccacttttggt 2299505  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    || |||||||| | ||||| ||||||||    
T  2299504 ccttgtaattttagattccgccactttt 2299477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 10322025 - 10321898
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| ||  || ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  10322025 gtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcctcccacttttggt 10321926  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
     | |||||||||| ||| ||||| ||||    
T  10321925 tcatgtaatttcagattactccaatttt 10321898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 30618046 - 30618172
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||| ||  || ||||| ||||||||||||||||||||||||| ||| |||||||| |    
T  30618046 gtaatttcatattgttccacttttggtccctccttttatcacgtcagcagaatctgcataaattacgtccctgtaatttcagatt-ctcccacttttgat 30618144  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    | ||||||||||| ||||||||||||||    
T  30618145 cactgtaatttcaaattcctccactttt 30618172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 3230155 - 3230030
Alignment:
Q  9 taatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtc 108  Q
    |||||||| |||||| |||||||||||  || ||||||||||||||||  || ||||| ||| ||||||||||||||||| ||||||| |||||||||||    
T  3230155 taatttcatattctttcacttttggtca-tcttttcatcacgtcaacagaatctgcataaatcacgtccctgtaatttcatattcctcccacttttggtc 3230057  T
Q  109 cctgtaatttcatattcctccactttt 135  Q
    | |||||||||||||||||||||||||    
T  3230056 cttgtaatttcatattcctccactttt 3230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 536 - 648
Target Start/End: Original strand, 14531728 - 14531840
Alignment:
Q  536 aaattgttattgatacttacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagat 635  Q
    |||||||||||||| || | ||||||||| ||||| ||||   ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  14531728 aaattgttattgattctaatgaaaatatacaaaggtggtagagtatatacaatgtctagctaagttgcttcaagcacaagcaatgtaacaaactctagat 14531827  T
Q  636 cttatttgctaac 648  Q
    |||||||||||||    
T  14531828 cttatttgctaac 14531840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 33637643 - 33637746
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||| ||  || |||||  |||||||||||||||||||||||||||| ||||||||||    
T  33637643 gtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcatagattacgtccctgtaatttcagattcctcccacttttggt 33637742  T
Q  108 ccct 111  Q
    ||||    
T  33637743 ccct 33637746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 18500641 - 18500513
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||  || ||||| ||||| |||||||||||||||||| | |  ||||||||||    
T  18500641 gtaattttagattcttccacttttggtccctcctttcatcaaggcaacagaatctgcataaattatgtccctgtaatttcagatcctttccacttttggt 18500542  T
Q  108 ccctgtaa-tttcatattcctccactttt 135  Q
    |||||||| ||| | ||||||||||||||    
T  18500541 ccctgtaatttttagattcctccactttt 18500513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 648
Target Start/End: Original strand, 17096236 - 17096327
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    ||||| || |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  17096236 aaaatgtacaaaggaggtagcttatatacaatgtctagctaagttgcttgaagcacaagcaatgtaacaaactatagatcttatctgctaac 17096327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 26385566 - 26385445
Alignment:
Q  10 aatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggtcc 109  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||  |   ||||||| ||| ||||||||||||||||| ||||||| || |||||||||    
T  26385566 aatttcatattcttccacttttggtctctcctttcatcaagtcataa---tatgcataaat-acgtccctgtaatttcatattcctcccagttttggtcc 26385471  T
Q  110 ctgtaatttcatattcctccactttt 135  Q
    ||||||||||| ||||||||||||||    
T  26385470 ctgtaatttcagattcctccactttt 26385445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 557 - 648
Target Start/End: Original strand, 27552072 - 27552163
Alignment:
Q  557 aaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    ||||| || |||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  27552072 aaaatgtacaaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttatctgctaac 27552163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 32017798 - 32017696
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |   |||||||| |||||| |||||||||||||| ||||||| ||||||||||    
T  32017798 gtaatttcatattcttccacttttggtccctcctttcatcacgtcagcggaatatgcataaattacatccctgtaatttcaaattcctc-cacttttggt 32017700  T
Q  108 ccct 111  Q
    ||||    
T  32017699 ccct 32017696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 30459195 - 30459083
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| | ||  || | ||| |||||||||||| |||||||| ||||||| ||||||||||    
T  30459195 gtaatttcagattctttcacttttggtctctcctttcatcacgttagcataatctccataaattacgtccctataatttcaaattcctcccacttttggt 30459096  T
Q  108 ccctgtaatttca 120  Q
    || ||||||||||    
T  30459095 ccttgtaatttca 30459083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 17142872 - 17142805
Alignment:
Q  68 aattacgtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17142872 aattaggtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccactttt 17142805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 566 - 640
Target Start/End: Original strand, 8315474 - 8315548
Alignment:
Q  566 aaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  8315474 aaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctagatcttat 8315548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 566 - 648
Target Start/End: Original strand, 27574709 - 27574791
Alignment:
Q  566 aaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttatttgctaac 648  Q
    |||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  27574709 aaaggaggtagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactttagatcttatctgctaac 27574791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 33714727 - 33714654
Alignment:
Q  62 tgcatcaattacgtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  33714727 tgcataaattacgtccttgtaatttcagattcctctcacttttggtctctgtaatttcagattcctccactttt 33714654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 553 - 640
Target Start/End: Complemental strand, 17780114 - 17780027
Alignment:
Q  553 tacgaaaatatataaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    ||||||||| || ||||||| || |||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  17780114 tacgaaaatgtacaaaggagatagcttatatacaatatctagctaagttgcttgaagcacaagcaatgtaacaaactctaaatcttat 17780027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 640
Target Start/End: Original strand, 8320013 - 8320087
Alignment:
Q  566 aaaggaggtaacttatatacaatgtctagctaggttgctcgaagcacaagcaatgtaacaaactctagatcttat 640  Q
    |||||||||| |||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||    
T  8320013 aaaggaggtagcttatatacaatatctagctaagtttcttgaagcacaagcaatgtaacaaactctagatcttat 8320087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 14681115 - 14681049
Alignment:
Q  69 attacgtccctgtaatttcagattcctctcacttttggtccctgtaatttcatattcctccactttt 135  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||||||| ||| ||||||||||    
T  14681115 attacgtccctgtaatttcagattactctcacttttggtccatataatttcagatttctccactttt 14681049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 19284213 - 19284261
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaaca 56  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19284213 gtaatttcagattcttccacttttggtccctcctttcatcatgtcaaca 19284261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 9854181 - 9854123
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcat 66  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||| ||| || |||||    
T  9854181 gtaatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatctgcat 9854123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 9481476 - 9481446
Alignment:
Q  8 gtaatttcagattcttccacttttggtccct 38  Q
    |||||||||||||||||||||||||||||||    
T  9481476 gtaatttcagattcttccacttttggtccct 9481446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 14680966 - 14681011
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||| ||||||||||||||||||| || ||||| |||||||    
T  14680966 gtaatttcatattcttccacttttggtccttcatttcaccacgtca 14681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 32017620 - 32017648
Alignment:
Q  8 gtaatttcagattcttccacttttggtcc 36  Q
    |||||||||||||||||||||||||||||    
T  32017620 gtaatttcagattcttccacttttggtcc 32017648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 15926 - 15798
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||| ||  || ||||| |||||   | ||||||||||||||||||| ||||||||||    
T  15926 gtaatttcatattctttcacttttggtctctcctttcatcacgtcagcagaatctgcataaattata-cgctgtaatttcagattcctcccacttttggt 15828  T
Q  108 ccctgtaatttcatattcctccacttttag 137  Q
    | ||||||||||| ||||||| ||||||||    
T  15827 ctctgtaatttcaaattcctcaacttttag 15798  T

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Target: scaffold0449 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 7493 - 7390
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||||||| ||||||||||  ||||||||||| |||||||| || ||||| |||||| ||| |||||||||||||||||  ||||||||||    
T  7493 gtaatttcagattcttctacttttggtctatcctttcatcaagtcaacaaaatctgcataaattacatccttgtaatttcagattcctaccacttttggt 7394  T
Q  108 ccct 111  Q
    ||||    
T  7393 ccct 7390  T

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Target: scaffold0881 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 513 - 387
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtcaacaacatatgcatcaattacgtccctgtaatttcagattcctctcacttttggt 107  Q
    ||||||||||||| |||||||||||||  ||||||| ||||| ||| ||  || ||||| |||||||||  |||||||||||||||||| |  |||||||    
T  513 gtaatttcagattattccacttttggtatctcctttaatcacatcagcagaatctgcataaattacgtct-tgtaatttcagattcctcccgattttggt 415  T
Q  108 ccctgtaatttcatattcctccactttt 135  Q
    ||||||||||||| ||||||| ||||||    
T  414 ccctgtaatttcagattcctctactttt 387  T

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Target: scaffold0881; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 305 - 335
Alignment:
Q  9 taatttcagattcttccacttttggtccctc 39  Q
    |||||||||||||||||||||||||||||||    
T  305 taatttcagattcttccacttttggtccctc 335  T

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Target: scaffold0117 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 12276 - 12231
Alignment:
Q  8 gtaatttcagattcttccacttttggtccctcctttcatcacgtca 53  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  12276 gtaatttcagattcttccacttttggtccatcctttcatcacgtca 12231  T

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Target: scaffold0440 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 3137 - 3104
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  3137 gttgcttgaagcacaagcaatgtaacaaactcta 3104  T

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Target: scaffold0352 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 4745 - 4781
Alignment:
Q  74 gtccctgtaatttcagattcctctcacttttggtccct 111  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  4745 gtccctgtaatttcagattcctc-cacttttggtccct 4781  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 44865 - 44898
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  44865 gttgcttgaagcacaagcaatgtaacaaactcta 44898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 49445 - 49478
Alignment:
Q  599 gttgctcgaagcacaagcaatgtaacaaactcta 632  Q
    |||||| |||||||||||||||||||||||||||    
T  49445 gttgcttgaagcacaagcaatgtaacaaactcta 49478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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