View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5527_low_14 (Length: 257)
Name: NF5527_low_14
Description: NF5527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5527_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 40232910 - 40232663
Alignment:
| Q |
1 |
tatataatataataagtataagaataattagtaagtaaacatcacataattgagctaggtaggtactatatatatagtatgtaattcgttaaagcaaaat |
100 |
Q |
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| T |
40232910 |
tatataatataataagtataagaataattagtaagtaaacatcacataattgagctaggtaggtactatatatatagtatgtaattcgttaaagcaaaat |
40232811 |
T |
|
| Q |
101 |
caggaatcgctctaatcaccacaaaaattgtgtaccaggttggtactaacctctaagtaagacttgtgtcccgcatttttgcaagccagattaggaaggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
40232810 |
caggaatcgctctaatcaccacaaaaattgtgtaccaggttggtactaacctctaagtaaaacttgtgtcccgcatttttgcaagccagattaggaaggt |
40232711 |
T |
|
| Q |
201 |
agtagtcccaatccatgtttcagtaaaatggattgtattgtagtatta |
248 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
40232710 |
agtagtcccaatccatgtttcggtaaaatggattgtattgtagtatta |
40232663 |
T |
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