View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5529-Insertion-3 (Length: 699)

Name: NF5529-Insertion-3
Description: NF5529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5529-Insertion-3
NF5529-Insertion-3
[»] chr7 (44 HSPs)
chr7 (109-699)||(43118715-43119298)
chr7 (8-112)||(43119647-43119752)
chr7 (491-616)||(16979934-16980059)
chr7 (461-641)||(19676962-19677142)
chr7 (488-638)||(23142646-23142796)
chr7 (8-73)||(43119461-43119526)
chr7 (515-639)||(34993148-34993272)
chr7 (502-595)||(8896605-8896698)
chr7 (489-618)||(37928290-37928419)
chr7 (493-583)||(18220984-18221074)
chr7 (509-622)||(25530559-25530672)
chr7 (498-616)||(30027956-30028076)
chr7 (502-638)||(12810154-12810289)
chr7 (488-605)||(16685734-16685853)
chr7 (488-605)||(17659970-17660089)
chr7 (491-610)||(43626345-43626464)
chr7 (461-595)||(8746149-8746282)
chr7 (466-639)||(31850719-31850893)
chr7 (490-617)||(1521199-1521323)
chr7 (491-605)||(1309720-1309834)
chr7 (486-605)||(41064292-41064415)
chr7 (510-605)||(31487725-31487820)
chr7 (488-543)||(34993091-34993146)
chr7 (465-595)||(26241575-26241705)
chr7 (478-605)||(42888306-42888433)
chr7 (465-559)||(18756912-18757006)
chr7 (499-553)||(31249568-31249622)
chr7 (494-595)||(45907033-45907134)
chr7 (490-574)||(39786447-39786531)
chr7 (71-114)||(43119322-43119366)
chr7 (119-155)||(49013049-49013085)
chr7 (496-595)||(21515032-21515131)
chr7 (528-583)||(23080658-23080713)
chr7 (536-591)||(23317839-23317894)
chr7 (463-597)||(24937843-24937976)
chr7 (496-566)||(18037851-18037921)
chr7 (335-437)||(39773168-39773270)
chr7 (488-638)||(41760332-41760482)
chr7 (521-638)||(7833770-7833887)
chr7 (488-593)||(47445349-47445454)
chr7 (502-590)||(8117451-8117539)
chr7 (496-596)||(11740362-11740462)
chr7 (490-534)||(30095394-30095438)
chr7 (165-197)||(38177747-38177779)
[»] chr8 (41 HSPs)
chr8 (488-617)||(44648931-44649060)
chr8 (460-600)||(3137408-3137548)
chr8 (489-605)||(10029165-10029281)
chr8 (462-639)||(20542356-20542533)
chr8 (488-630)||(600350-600492)
chr8 (491-605)||(18200677-18200791)
chr8 (491-605)||(35901412-35901526)
chr8 (490-574)||(3347506-3347590)
chr8 (111-197)||(25105711-25105797)
chr8 (462-599)||(42361481-42361618)
chr8 (493-638)||(17720176-17720322)
chr8 (462-641)||(11150890-11151068)
chr8 (467-617)||(27506920-27507068)
chr8 (493-595)||(547075-547181)
chr8 (485-578)||(18045313-18045406)
chr8 (491-616)||(41726888-41727013)
chr8 (488-616)||(40489842-40489969)
chr8 (502-638)||(43917557-43917693)
chr8 (488-595)||(6270143-6270249)
chr8 (463-599)||(23425231-23425371)
chr8 (509-640)||(34678221-34678351)
chr8 (495-605)||(32881116-32881226)
chr8 (502-613)||(1342317-1342427)
chr8 (554-629)||(23725684-23725759)
chr8 (507-586)||(25250321-25250401)
chr8 (496-640)||(33621340-33621478)
chr8 (490-564)||(12981605-12981679)
chr8 (509-575)||(37561513-37561579)
chr8 (488-574)||(40607332-40607418)
chr8 (501-583)||(44947372-44947453)
chr8 (488-597)||(18131203-18131311)
chr8 (463-588)||(39534107-39534231)
chr8 (509-565)||(12201835-12201891)
chr8 (509-565)||(12446263-12446319)
chr8 (504-616)||(18647470-18647581)
chr8 (513-597)||(44655252-44655336)
chr8 (488-575)||(4989728-4989815)
chr8 (504-638)||(31330970-31331105)
chr8 (491-532)||(40604241-40604282)
chr8 (547-595)||(10652793-10652841)
chr8 (509-628)||(23797507-23797626)
[»] chr3 (34 HSPs)
chr3 (488-631)||(49261757-49261900)
chr3 (491-612)||(44698214-44698335)
chr3 (490-597)||(4020109-4020216)
chr3 (461-605)||(6785760-6785905)
chr3 (509-638)||(48338783-48338912)
chr3 (495-595)||(29032425-29032525)
chr3 (460-639)||(42437681-42437858)
chr3 (508-611)||(50958857-50958960)
chr3 (490-616)||(635700-635826)
chr3 (488-639)||(38359016-38359167)
chr3 (486-616)||(11676727-11676857)
chr3 (501-617)||(54801336-54801452)
chr3 (488-605)||(28709559-28709676)
chr3 (526-638)||(4128724-4128836)
chr3 (461-640)||(44291197-44291374)
chr3 (502-605)||(55446736-55446838)
chr3 (495-605)||(12109653-12109763)
chr3 (496-637)||(34145906-34146046)
chr3 (491-595)||(8326151-8326254)
chr3 (490-564)||(1711919-1711993)
chr3 (128-196)||(18391942-18392010)
chr3 (490-605)||(26613060-26613176)
chr3 (521-605)||(31494031-31494115)
chr3 (509-605)||(25319466-25319562)
chr3 (509-596)||(2379619-2379705)
chr3 (496-575)||(25958060-25958139)
chr3 (550-605)||(53818829-53818884)
chr3 (122-185)||(54697932-54697995)
chr3 (463-516)||(27144092-27144145)
chr3 (502-561)||(3215088-3215147)
chr3 (488-590)||(15671110-15671212)
chr3 (537-591)||(37043028-37043082)
chr3 (494-590)||(17109533-17109630)
chr3 (525-605)||(33051578-33051658)
[»] chr2 (40 HSPs)
chr2 (488-638)||(40574136-40574286)
chr2 (465-618)||(13717168-13717320)
chr2 (491-599)||(40346717-40346825)
chr2 (490-599)||(23453353-23453463)
chr2 (493-605)||(4978750-4978862)
chr2 (489-613)||(6462586-6462709)
chr2 (493-605)||(13738393-13738505)
chr2 (493-605)||(18717853-18717965)
chr2 (490-638)||(41436295-41436443)
chr2 (463-629)||(4557550-4557717)
chr2 (501-605)||(4996666-4996770)
chr2 (491-613)||(1004771-1004892)
chr2 (490-575)||(4186405-4186490)
chr2 (504-605)||(38024190-38024290)
chr2 (489-639)||(8580481-8580631)
chr2 (463-595)||(1870462-1870593)
chr2 (525-629)||(6315866-6315970)
chr2 (461-643)||(3689585-3689765)
chr2 (118-197)||(8442616-8442695)
chr2 (490-605)||(18857437-18857552)
chr2 (494-610)||(32909404-32909523)
chr2 (463-590)||(19889763-19889891)
chr2 (529-597)||(27896474-27896542)
chr2 (460-567)||(13835877-13835984)
chr2 (491-589)||(3201134-3201232)
chr2 (511-605)||(28331270-28331364)
chr2 (561-618)||(42251597-42251654)
chr2 (488-595)||(7932884-7932991)
chr2 (490-605)||(42551958-42552072)
chr2 (546-597)||(43131810-43131861)
chr2 (116-194)||(3960856-3960934)
chr2 (463-544)||(36087407-36087488)
chr2 (485-605)||(43080296-43080415)
chr2 (491-605)||(17641177-17641291)
chr2 (109-191)||(26674105-26674187)
chr2 (123-153)||(37940462-37940492)
chr2 (491-543)||(7669194-7669246)
chr2 (109-197)||(22311667-22311755)
chr2 (389-433)||(31380553-31380597)
chr2 (109-149)||(36168676-36168716)
[»] chr1 (32 HSPs)
chr1 (462-631)||(46295838-46296007)
chr1 (490-641)||(13969094-13969245)
chr1 (488-615)||(26829485-26829612)
chr1 (463-616)||(8001715-8001868)
chr1 (490-618)||(33148126-33148254)
chr1 (497-595)||(10226464-10226562)
chr1 (462-595)||(27688492-27688625)
chr1 (491-618)||(17169266-17169393)
chr1 (465-595)||(11449073-11449203)
chr1 (460-575)||(48282856-48282971)
chr1 (496-638)||(32187024-32187165)
chr1 (541-631)||(34347556-34347646)
chr1 (492-614)||(30941466-30941588)
chr1 (488-596)||(52429639-52429748)
chr1 (490-595)||(40699263-40699368)
chr1 (490-595)||(49731157-49731262)
chr1 (528-599)||(38597489-38597560)
chr1 (488-595)||(39238844-39238951)
chr1 (512-649)||(8279695-8279832)
chr1 (490-540)||(39993446-39993496)
chr1 (491-616)||(50015771-50015896)
chr1 (498-605)||(30109229-30109337)
chr1 (573-614)||(17644831-17644872)
chr1 (468-564)||(11065840-11065936)
chr1 (496-590)||(40391218-40391313)
chr1 (493-575)||(48579929-48580011)
chr1 (521-562)||(15398275-15398316)
chr1 (109-149)||(23998908-23998948)
chr1 (461-517)||(27160276-27160332)
chr1 (109-197)||(27580744-27580832)
chr1 (523-567)||(38169094-38169138)
chr1 (509-597)||(50127362-50127450)
[»] chr4 (38 HSPs)
chr4 (462-611)||(12094955-12095104)
chr4 (488-640)||(27284040-27284192)
chr4 (493-615)||(2824814-2824936)
chr4 (485-639)||(31991448-31991602)
chr4 (485-605)||(12076418-12076538)
chr4 (488-640)||(48419041-48419193)
chr4 (109-196)||(8019961-8020048)
chr4 (488-610)||(13967842-13967965)
chr4 (509-616)||(28740277-28740384)
chr4 (486-643)||(20775037-20775194)
chr4 (488-589)||(31089778-31089878)
chr4 (527-595)||(19480550-19480618)
chr4 (523-643)||(39810731-39810850)
chr4 (491-638)||(28176746-28176892)
chr4 (506-594)||(44190235-44190321)
chr4 (464-616)||(52837233-52837388)
chr4 (502-594)||(2565418-2565510)
chr4 (493-596)||(22019615-22019718)
chr4 (473-595)||(22611875-22611998)
chr4 (472-586)||(7437806-7437920)
chr4 (460-605)||(27133552-27133697)
chr4 (493-597)||(19147146-19147250)
chr4 (485-596)||(51100016-51100128)
chr4 (490-605)||(16341097-16341212)
chr4 (463-614)||(41142262-41142413)
chr4 (491-574)||(45921335-45921418)
chr4 (572-641)||(36506747-36506816)
chr4 (509-597)||(30694297-30694382)
chr4 (496-578)||(31861429-31861511)
chr4 (525-589)||(44639887-44639951)
chr4 (506-589)||(37431793-37431876)
chr4 (488-595)||(55090794-55090900)
chr4 (502-612)||(55126785-55126896)
chr4 (116-153)||(7593144-7593181)
chr4 (117-174)||(8019528-8019585)
chr4 (462-534)||(2908178-2908250)
chr4 (546-578)||(3708722-3708754)
chr4 (539-595)||(36752696-36752752)
[»] chr5 (23 HSPs)
chr5 (460-638)||(22293954-22294131)
chr5 (490-616)||(11815903-11816029)
chr5 (488-618)||(27544579-27544709)
chr5 (493-605)||(30840596-30840707)
chr5 (493-615)||(30293821-30293943)
chr5 (491-587)||(36482072-36482168)
chr5 (461-597)||(14863347-14863483)
chr5 (490-587)||(14044677-14044772)
chr5 (495-568)||(18242479-18242552)
chr5 (465-637)||(8151765-8151940)
chr5 (493-608)||(41645034-41645147)
chr5 (489-595)||(1447548-1447654)
chr5 (488-590)||(2611141-2611244)
chr5 (488-566)||(6102870-6102948)
chr5 (529-610)||(6646286-6646367)
chr5 (550-638)||(7609595-7609682)
chr5 (455-638)||(8435027-8435210)
chr5 (529-599)||(1056818-1056888)
chr5 (460-566)||(12036273-12036379)
chr5 (489-539)||(34346951-34347001)
chr5 (550-638)||(7319228-7319316)
chr5 (119-147)||(15069748-15069776)
chr5 (509-617)||(27365985-27366093)
[»] scaffold0002 (1 HSPs)
scaffold0002 (489-631)||(120646-120788)
[»] chr6 (23 HSPs)
chr6 (495-605)||(5611129-5611239)
chr6 (490-616)||(32134038-32134164)
chr6 (488-638)||(227303-227455)
chr6 (490-605)||(19659610-19659724)
chr6 (462-638)||(31223165-31223330)
chr6 (463-595)||(33121279-33121411)
chr6 (486-595)||(2911458-2911567)
chr6 (109-197)||(21917346-21917434)
chr6 (460-605)||(2470354-2470499)
chr6 (496-597)||(10008204-10008304)
chr6 (488-605)||(17834969-17835086)
chr6 (523-596)||(18493255-18493328)
chr6 (463-595)||(19320239-19320372)
chr6 (536-610)||(8636785-8636859)
chr6 (496-605)||(17345843-17345952)
chr6 (490-638)||(30929465-30929615)
chr6 (546-597)||(27082322-27082373)
chr6 (493-595)||(12677833-12677935)
chr6 (464-568)||(17453942-17454046)
chr6 (509-563)||(2613366-2613420)
chr6 (116-186)||(18239246-18239315)
chr6 (491-576)||(2398040-2398125)
chr6 (463-575)||(17506299-17506411)
[»] scaffold0204 (1 HSPs)
scaffold0204 (491-643)||(15362-15514)
[»] scaffold0039 (1 HSPs)
scaffold0039 (496-596)||(29988-30088)
[»] scaffold0329 (1 HSPs)
scaffold0329 (491-569)||(7398-7475)
[»] scaffold0079 (1 HSPs)
scaffold0079 (490-605)||(51649-51764)
[»] scaffold0036 (1 HSPs)
scaffold0036 (472-575)||(36565-36668)
[»] scaffold0283 (1 HSPs)
scaffold0283 (501-583)||(3350-3432)
[»] scaffold0006 (1 HSPs)
scaffold0006 (463-587)||(38822-38946)
[»] scaffold0299 (1 HSPs)
scaffold0299 (493-615)||(18014-18137)
[»] scaffold1372 (1 HSPs)
scaffold1372 (460-534)||(1237-1310)
[»] scaffold0957 (1 HSPs)
scaffold0957 (502-600)||(1921-2018)
[»] scaffold0236 (1 HSPs)
scaffold0236 (116-174)||(16928-16986)
[»] scaffold0117 (1 HSPs)
scaffold0117 (503-597)||(16838-16932)


Alignment Details
Target: chr7 (Bit Score: 489; Significance: 0; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 109 - 699
Target Start/End: Complemental strand, 43119298 - 43118715
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactccttactcattc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |    
T  43119298 aaatatatgcatttatatcatgtatttactacaaaactatagtaatgaatgttgccatttattttaaaaaatggagagaatctcaactcctt-------c 43119206  T
Q  209 aaagaaataaaactcactactctcacaaataatccggccactcttcttcgcattcaatttcgttgttttcgtatacaccgactcactcaacattgctact 308  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43119205 aaagaaataaaactcgctactctcagtaataatccggccactcttcttcgcattcaatttcgttgtttttgtatacaccgactcactcaacattgctact 43119106  T
Q  309 tttgcttcttcctttctttgtattgttatgatatgattcaaaacaatatataaggaaacacacttgacataacatcactcgttgatataaatggacacat 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||    
T  43119105 tttgcttcttcctttctttgtattgttatgatatgattcaaaacaatatatgaggaaacacatttgacataacatcactcgttgatataaatggacatat 43119006  T
Q  409 ggctagtgatcttaaaatcaatgaagcttcgattgtgctttatagataaagaaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctac 508  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43119005 ggctagtgattttaaaatcaatgaagattcgattgtgctttatagataaagaaagggtcttgttaaccggtgcctccagggcaatggttaagaaatctac 43118906  T
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 608  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  43118905 aaatataaattttgtcttgaaaatatgagatgttacatttgatcaaatagtaattacgcaattttttcattaaaacttacttgttttggatgattaagca 43118806  T
Q  609 ttgcccttgaagcactggttaaccttctccataaagaaatgattatcgccaaggagtatgaagaaaattaacaaagtggctcttctctctc 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43118805 ttgcccttgaagcacttgttaaccttctccataaagaaatgattatcgccaaggagtatgaagaaaatttacaaagtggctcttctctctc 43118715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 43119752 - 43119647
Alignment:
Q  8 ggcacgacgatcatcattcatcaatgttttattcacgagtgtagatcatctctattacttaataaaaatggcaatatcaattcttatag-tttcttgtgt 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  43119752 ggcacgacgatcatcattcataaatgttttattcacgagtgtagatcatttctattacttaataaaaatggcaatatcaattcttatagtttttttgtgt 43119653  T
Q  107 ataaat 112  Q
    ||||||    
T  43119652 ataaat 43119647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 491 - 616
Target Start/End: Complemental strand, 16980059 - 16979934
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||  ||| ||||| |||||||| |||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| |||| ||||||    
T  16980059 aatggttaaagaatttacaattagaaattttgtcttgaaaatataagatgttacttttgatcgagtaataatcacacaactttttcataaaaatttactt 16979960  T
Q  591 gttttggatgattaagcattgccctt 616  Q
    |||||||||| |||| || |||||||    
T  16979959 gttttggatgcttaaccaatgccctt 16979934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 461 - 641
Target Start/End: Complemental strand, 19677142 - 19676962
Alignment:
Q  461 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 560  Q
    |||||||||| |||||  ||||  || |||| |||||||| |||| ||||||||||||| |||||||||||||| ||||||||| |||||| |||||||     
T  19677142 aagggtcttgctaaccaatgccctcagggcattggttaaggaatcgacaaatagaaattttgtcttgaaaatataagatgttacttttgattaagtaatg 19677043  T
Q  561 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 641  Q
    |||||||| ||||| ||  ||||||| ||||||| ||||| |||| || ||||||||  ||||| |||| | |||||||||    
T  19677042 attacacaccttttacaccaaaacttgcttgtttaggatgcttaaccaatgcccttggggcactagttagcattctccata 19676962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 488 - 638
Target Start/End: Original strand, 23142646 - 23142796
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac-tttttcattaaaactt 586  Q
    ||||||| |||| ||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||||| |||||||||| |||||||| |||||||    
T  23142646 ggcaatgattaataaatctacaaatagaaattttgt-ttggaaatataagatgttatttttgatcaagtaattattacacaacttttttcataaaaactt 23142744  T
Q  587 acttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    |||| ||||||||| |||| || ||| |||||  |||| |||||| ||||||    
T  23142745 acttattttggatgtttaaccaatgctcttgagacactcgttaacattctcc 23142796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 43119526 - 43119461
Alignment:
Q  8 ggcacgacgatcatcattcatcaatgttttattcacgagtgtagatcatctctattacttaataaa 73  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43119526 ggcacgaccatcatcattcatcaatgttttattcacgagtgtagatcatctctattacttaataaa 43119461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 515 - 639
Target Start/End: Original strand, 34993148 - 34993272
Alignment:
Q  515 aaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgccc 614  Q
    ||||| |||||| ||||||| ||||||||| |||||| || ||||||||||||||||||||||| |||||||||||| ||| |||| |||| |||||| |    
T  34993148 aaattttgtcttaaaaatataagatgttacttttgataaaataataattacacaactttttcatgaaaacttacttgatttagatgcttaatcattgctc 34993247  T
Q  615 ttgaagcactggttaaccttctcca 639  Q
    ||   |||||||||||| |||||||    
T  34993248 ttagggcactggttaacattctcca 34993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 502 - 595
Target Start/End: Original strand, 8896605 - 8896698
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    |||||||||||| ||||| |||||| ||||||| ||||||||| |||||||| ||||| ||||||||| |||||||| ||||||||||||||||    
T  8896605 aatctacaaatataaattttgtcttaaaaatataagatgttacttttgatcaggtaatgattacacaattttttcatgaaaacttacttgtttt 8896698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 489 - 618
Target Start/End: Complemental strand, 37928419 - 37928290
Alignment:
Q  489 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 588  Q
    |||||||||||  |||||| ||||| ||||| | |||||||||||| | ||||||  |||||| ||||||| ||||||||||||||| || |||||||||    
T  37928419 gcaatggttaaagaatctataaatataaattttatcttgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaaacttac 37928320  T
Q  589 ttgttttggatgattaagcattgcccttga 618  Q
    || ||||||||| |||| || || ||||||    
T  37928319 ttattttggatgtttaaccaatgtccttga 37928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 493 - 583
Target Start/End: Original strand, 18220984 - 18221074
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 583  Q
    |||||||| ||||||| ||||||| || || |||| |||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  18220984 tggttaaggaatctactaatagaagttttgacttggaaatataagatgttacatttgattaagtaataattatacaactttttcataaaaa 18221074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 509 - 622
Target Start/End: Original strand, 25530559 - 25530672
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 608  Q
    ||||||||||| | ||||  |||||| | |||||||||||||| ||||||| ||||||||| |||||||| |||||||| |||||||||||| | || ||    
T  25530559 aaatagaaattttatcttagaaatataaaatgttacatttgataaagtaatgattacacaattttttcataaaaacttatttgttttggatgctgaacca 25530658  T
Q  609 ttgcccttgaagca 622  Q
    || | |||||||||    
T  25530659 ttactcttgaagca 25530672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 616
Target Start/End: Complemental strand, 30028076 - 30027956
Alignment:
Q  498 aagaaatctacaaatagaaattctgtcttgaaaatatg--agatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||||||||||  |||||||| |||| |||||||||   ||||||||| |||||| ||||||| || ||||||||||||||| ||| |||||||||| |    
T  30028076 aagaaatctacagttagaaattttgtcatgaaaatatataagatgttacttttgataaagtaatgatcacacaactttttcatgaaatcttacttgttat 30027977  T
Q  596 ggatgattaagcattgccctt 616  Q
    ||||| |||| |||| |||||    
T  30027976 ggatgtttaaccattaccctt 30027956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 638
Target Start/End: Original strand, 12810154 - 12810289
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 601  Q
    |||||| ||||  ||||| |||||| ||||||| |||| |||| |||||  |||||||||||||||||||||||||| ||| | | |||||||| ||||     
T  12810154 aatctataaatgaaaattttgtcttaaaaatataagatattacttttgacaaagtaataattacacaactttttcatgaaagcatgcttgttttagatgt 12810253  T
Q  602 ttaagcattgcccttgaagcactggttaaccttctcc 638  Q
    |||| ||||||||||| | ||| ||||||| ||||||    
T  12810254 ttaaccattgcccttgga-caccggttaacattctcc 12810289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 488 - 605
Target Start/End: Complemental strand, 16685853 - 16685734
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttaca-tttgatcaagtaataattacacaacttttt-cattaaaact 585  Q
    |||| |||||||| ||||||| ||||||| || ||||||  |||||| |||||||||  |||||||||||||| |||||||||||||||  || ||||||    
T  16685853 ggcattggttaaggaatctactaatagaagttttgtctttgaaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaact 16685754  T
Q  586 tacttgttttggatgattaa 605  Q
    ||||| ||||||||| ||||    
T  16685753 tacttattttggatgcttaa 16685734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 488 - 605
Target Start/End: Complemental strand, 17660089 - 17659970
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttaca-tttgatcaagtaataattacacaacttttt-cattaaaact 585  Q
    |||| |||||||| ||||||| ||||||| || ||||||  |||||| |||||||||  |||||||||||||| |||||||||||||||  || ||||||    
T  17660089 ggcattggttaaggaatctactaatagaagttttgtctttgaaatataagatgttactctttgatcaagtaatgattacacaactttttaaataaaaact 17659990  T
Q  586 tacttgttttggatgattaa 605  Q
    ||||| ||||||||| ||||    
T  17659989 tacttattttggatgcttaa 17659970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 491 - 610
Target Start/End: Complemental strand, 43626464 - 43626345
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||| ||||||||||| |||||| ||||| ||||||||||| || ||||||||  ||| || ||||||||||||||||| |||||||| |||| ||| ||    
T  43626464 aatgattaagaaatcttcaaataaaaattttgtcttgaaaaaattagatgttattttttataaagtaataattacacaattttttcataaaaatttattt 43626365  T
Q  591 gttttggatgattaagcatt 610  Q
     |||| |||| |||| ||||    
T  43626364 attttagatgtttaaccatt 43626345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 595
Target Start/End: Complemental strand, 8746282 - 8746149
Alignment:
Q  461 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 560  Q
    ||||||||||||||| ||| |   ||||||| |||||||| || |||| |||| ||||| ||||||| ||||||   ||||||| ||||||||| ||||     
T  8746282 aagggtcttgttaactggtactctcaaggcattggttaaggaa-ctactaataaaaattttgtcttgtaaatatagaatgttacttttgatcaaataatg 8746184  T
Q  561 attacacaactttttcattaaaacttacttgtttt 595  Q
    |||| ||||||||||||| ||||||||||| ||||    
T  8746183 attatacaactttttcataaaaacttacttatttt 8746149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 466 - 639
Target Start/End: Original strand, 31850719 - 31850893
Alignment:
Q  466 tcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattac 565  Q
    ||||| |||||||||||  ||  ||||||||||| ||||| | ||||| ||||| ||||||  |||||| ||||||||| ||| || || |||| |||||    
T  31850719 tcttgctaaccggtgccctcagagcaatggttaaaaaatccataaataaaaattttgtcttagaaatataagatgttacttttaataaaataatgattac 31850818  T
Q  566 acaactttttcat-taaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 639  Q
    | || ||||||||  |||||||||||||||| |||| |||| |||| || ||| ||||||  ||||| |||||||    
T  31850819 ataattttttcataaaaaacttacttgttttagatgcttaaccattacctttggagcactaattaacattctcca 31850893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 617
Target Start/End: Original strand, 1521199 - 1521323
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    |||||||||||||||||||| ||||||| ||| ||||| || ||| | ||||||| ||||||  |   || ||||| ||| ||||||||  |||||||||    
T  1521199 caatggttaagaaatctacagatagaaagtctttcttggaattataaaatgttacttttgataca---atgattacgcaattttttcatggaaacttact 1521295  T
Q  590 tgttttggatgattaagcattgcccttg 617  Q
    ||||||||||| |||| |||||||||||    
T  1521296 tgttttggatgtttaaccattgcccttg 1521323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 605
Target Start/End: Original strand, 1309720 - 1309834
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||| |||||||||||||||||| | |||| ||||||| | | ||||| ||| ||||| |||  ||||||||| |||||||| |||| ||| ||    
T  1309720 aatggttaaggaatctacaaatagaaattttatcttaaaaatataatacgttactttttatcaaataactattacacaattttttcataaaaatttattt 1309819  T
Q  591 gttttggatgattaa 605  Q
     ||||||||| ||||    
T  1309820 attttggatgtttaa 1309834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 605
Target Start/End: Original strand, 41064292 - 41064415
Alignment:
Q  486 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatg----agatgttacatttgatcaagtaataattacacaactttttcattaa 581  Q
    |||| ||||||||||  || || ||||||||||| | ||||||||||||     ||||||||| ||||||||||||||  ||| |||||||||| |||||    
T  41064292 aaggtaatggttaagggatttataaatagaaattttatcttgaaaatatatataagatgttacttttgatcaagtaatggttagacaacttttttattaa 41064391  T
Q  582 aacttacttgttttggatgattaa 605  Q
    |||||| || ||||||||| ||||    
T  41064392 aacttatttattttggatgcttaa 41064415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 31487725 - 31487820
Alignment:
Q  510 aatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
    |||||||||| | ||||| |||||| ||||||||  ||| || ||||||||||||||||| |||||| | |||||||| || ||||||||| ||||    
T  31487725 aatagaaattttatcttggaaatataagatgttattttttattaagtaataattacacaattttttcttaaaaacttatttattttggatgtttaa 31487820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 543
Target Start/End: Original strand, 34993091 - 34993146
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgtta 543  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||    
T  34993091 ggcaatggttaaggaatctacaaatataaattttgtcttgaaaatataagatgtta 34993146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 595
Target Start/End: Original strand, 26241575 - 26241705
Alignment:
Q  465 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 564  Q
    |||||| | ||||||||||  | |||||||||||||||||| | || ||||| || ||| ||| |||  | | ||||||||||||||||| |||||||||    
T  26241575 gtcttgcttaccggtgccttaagggcaatggttaagaaatccaaaagtagaagttttgttttggaaacgtaatatgttacatttgatcaaataataatta 26241674  T
Q  565 cacaactttttcattaaaacttacttgtttt 595  Q
     || |||||||  | |||| |||||||||||    
T  26241675 tactactttttattaaaaagttacttgtttt 26241705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 478 - 605
Target Start/End: Complemental strand, 42888433 - 42888306
Alignment:
Q  478 gtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttca 577  Q
    ||||| |||||  |||||||||| |||||||||||| |  || |  ||||||||||| ||||||| | |||||| ||||||| ||| ||||| ||||  |    
T  42888433 gtgcccccaagataatggttaaggaatctacaaataaattttttaacttgaaaatataagatgttgcttttgataaagtaatgattgcacaaattttcta 42888334  T
Q  578 ttaaaacttacttgttttggatgattaa 605  Q
    | ||||||||||| |||| |||| ||||    
T  42888333 tgaaaacttacttattttagatgtttaa 42888306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 559
Target Start/End: Complemental strand, 18757006 - 18756912
Alignment:
Q  465 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    |||||| ||||| |||||  || |||| || ||||| |||||||||||||||||| ||||||| |||||  |  |||||| ||||||||||||||    
T  18757006 gtcttgctaaccagtgccctcatggcattgattaaggaatctacaaatagaaattttgtcttgcaaataaaatgtgttacttttgatcaagtaat 18756912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 499 - 553
Target Start/End: Complemental strand, 31249622 - 31249568
Alignment:
Q  499 agaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatca 553  Q
    ||||||||| ||||| ||||| |||||||||||||| ||||||||| ||||||||    
T  31249622 agaaatctataaatataaattttgtcttgaaaatataagatgttacttttgatca 31249568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 595
Target Start/End: Original strand, 45907033 - 45907134
Alignment:
Q  494 ggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtt 593  Q
    ||||||| |||||| |||||||  || ||||||| |||||| |  ||| || ||| |||||||||||||||||  ||||||| || ||||||||||| ||    
T  45907033 ggttaaggaatctataaatagattttttgtcttgtaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaacttacttctt 45907132  T
Q  594 tt 595  Q
    ||    
T  45907133 tt 45907134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 574
Target Start/End: Original strand, 39786447 - 39786531
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 574  Q
    ||||||||||| |||||| |||||||||   |||||||||||||| || | | || |||||| || |||||||||||| ||||||    
T  39786447 caatggttaaggaatctataaatagaaaacttgtcttgaaaatataagttttaacttttgattaaataataattacactactttt 39786531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 43119366 - 43119322
Alignment:
Q  71 aaaaatggcaatatcaattcttatag-tttcttgtgtataaatat 114  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    
T  43119366 aaaaatggcaatatcaattcttatagtttttttgtgtataaatat 43119322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 49013049 - 49013085
Alignment:
Q  119 atttatatcatgtatttactacaaaactatagtaacg 155  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49013049 atttatatcatgtatttactacataactatagtaacg 49013085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 595
Target Start/End: Complemental strand, 21515131 - 21515032
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| |||||| ||||||||||| |  | ||||||||  ||||||||| ||| ||||| ||||||||||||| |||||  |  ||||||||||| ||||    
T  21515131 ttaaggaatctataaatagaaattttaacatgaaaatacaagatgttacttttaatcaaataataattacacaccttttaaaccaaaacttacttatttt 21515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 583
Target Start/End: Original strand, 23080658 - 23080713
Alignment:
Q  528 aaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 583  Q
    ||||||| ||||||||| |||||||||||||| |||||| || |||||||| ||||    
T  23080658 aaaatataagatgttacttttgatcaagtaatgattacataattttttcataaaaa 23080713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 591
Target Start/End: Original strand, 23317839 - 23317894
Alignment:
Q  536 agatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttg 591  Q
    ||||||||| ||||||||||| || ||||||| ||||||| || ||||||||||||    
T  23317839 agatgttacttttgatcaagttatgattacaccacttttttatgaaaacttacttg 23317894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 597
Target Start/End: Complemental strand, 24937976 - 24937843
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgtt-acatttgatcaagtaataa 561  Q
    |||||||| ||||| |||||  || ||||||||||||| || ||| ||||||||| | ||| || ||||||| |||| || || ||| || |||||||||    
T  24937976 gggtcttgctaaccagtgccctcagggcaatggttaaggaaactataaatagaaaatttgttttaaaaatat-agattttgacttttaattaagtaataa 24937878  T
Q  562 ttacacaactttttcattaaaacttacttgttttgg 597  Q
    |||||| ||||||| || |||| |||||| ||||||    
T  24937877 ttacaccacttttt-ataaaaagttacttattttgg 24937843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 566
Target Start/End: Original strand, 18037851 - 18037921
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca 566  Q
    |||||||||| | ||||| ||||| ||| |||||||||| |  |||||| ||||||||| |||||||||||    
T  18037851 ttaagaaatccataaataaaaattttgttttgaaaatataaattgttacttttgatcaaataataattaca 18037921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 39773168 - 39773270
Alignment:
Q  335 tatgatatgattcaaaacaatatataaggaaacacacttgacataacatcactcgttgatataaatggacacatggctagtgatcttaaaatcaatgaag 434  Q
    |||| ||||||||||||  | ||||||||||  |||| || |||||||| | | ||||| | |||||||||  |||||||||||| |||||| || ||||    
T  39773168 tatgttatgattcaaaatgacatataaggaattacacatggcataacataattggttgagaaaaatggacatgtggctagtgatcctaaaattaaggaag 39773267  T
Q  435 ctt 437  Q
    |||    
T  39773268 ctt 39773270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 638
Target Start/End: Original strand, 41760332 - 41760482
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||  || ||| ||||||||||| |||||| ||||| | || | |||  ||| |||||||||| ||||||||||||||| || ||| ||||    
T  41760332 ggcactggttaaagaaactaaaaatagaaattatgtcttaaaaatgtaagtttttattttttatcaagtaattattacacaactttttaataaaatctta 41760431  T
Q  588 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
     |  ||||||||| |||| || || || |||| ||||  ||||| ||||||    
T  41760432 ttctttttggatgcttaaccaatgtccatgaaacactatttaacattctcc 41760482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 638
Target Start/End: Original strand, 7833770 - 7833887
Alignment:
Q  521 tgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaag 620  Q
    |||||||||||||| |  |||||  ||||| ||| |||| ||| ||| ||||||| || ||| |||||||||||||| || |||| || |||||| |  |    
T  7833770 tgtcttgaaaatataaactgttatttttgaccaactaattattgcactactttttaataaaatcttacttgttttggctgcttaaccaatgccctcgggg 7833869  T
Q  621 cactggttaaccttctcc 638  Q
    || |||||||| ||||||    
T  7833870 cattggttaacattctcc 7833887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 593
Target Start/End: Original strand, 47445349 - 47445454
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||| ||||   ||||||||||| ||  |||||||||| || | |||| |||||| |||||||||||| || | ||||| || ||||||||    
T  47445349 ggcactggttaaggaatccttaaatagaaattttgctttgaaaatataagtttttacttttgatgaagtaataattaaactatttttttataaaaactta 47445448  T
Q  588 cttgtt 593  Q
    | ||||    
T  47445449 catgtt 47445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 502 - 590
Target Start/End: Original strand, 8117451 - 8117539
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||| |||||||| || |||||||||||||| |  |||||  ||| || || |||||||||||  ||||||| || |||||||||||    
T  8117451 aatctataaatagaatttatgtcttgaaaatataaattgttattttttattaaataataattacattactttttaataaaaacttactt 8117539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 496 - 596
Target Start/End: Original strand, 11740362 - 11740462
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| ||||||  ||||||||   |||||||||||||| |  |||||| ||||||||| |||| ||||||| ||||||| || |||  |||||| ||||    
T  11740362 ttaaggaatctaataatagaaaaattgtcttgaaaatataaactgttacttttgatcaactaattattacaccactttttaataaaattttacttctttt 11740461  T
Q  596 g 596  Q
    |    
T  11740462 g 11740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 534
Target Start/End: Complemental strand, 30095438 - 30095394
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatat 534  Q
    ||||| |||||||||||||||||||||| |  |||||||||||||    
T  30095438 caatgattaagaaatctacaaatagaaaattagtcttgaaaatat 30095394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 38177779 - 38177747
Alignment:
Q  165 atttattttaaaaaatggagagaatctcaactc 197  Q
    ||||||||||| |||||||||||||||||||||    
T  38177779 atttattttaataaatggagagaatctcaactc 38177747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 488 - 617
Target Start/End: Original strand, 44648931 - 44649060
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||| |||||| ||||||| |||||||||||||||||| ||||||||    
T  44648931 ggcaatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttgataaagtaatgattacacaactttttcatgaaaactta 44649030  T
Q  588 cttgttttggatgattaagcattgcccttg 617  Q
     |||||||||||| |||| |||||||||||    
T  44649031 tttgttttggatgcttaatcattgcccttg 44649060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 460 - 600
Target Start/End: Complemental strand, 3137548 - 3137408
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    ||||||||||| ||||| |||||  || |||||||||||||||||  | ||||||||||| |||||||||||| | ||||||||| ||||||||||||||    
T  3137548 aaagggtcttgctaaccagtgccctcagggcaatggttaagaaattcagaaatagaaattttgtcttgaaaatgtaagatgttacttttgatcaagtaat 3137449  T
Q  560 aattacacaactttttcattaaaacttacttgttttggatg 600  Q
     ||||||||||||||||||  ||||||| ||||||||||||    
T  3137448 tattacacaactttttcatataaacttatttgttttggatg 3137408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 10029281 - 10029165
Alignment:
Q  489 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 588  Q
    ||||||||||||||||||||||||| ||||| | ||||| |||||| ||||||||| |||||||||||||| |||| ||||||||||||| |||| ||||    
T  10029281 gcaatggttaagaaatctacaaataaaaattttatcttggaaatataagatgttacttttgatcaagtaatgattatacaactttttcataaaaatttac 10029182  T
Q  589 ttgttttggatgattaa 605  Q
    ||| |||||||| ||||    
T  10029181 ttgatttggatgcttaa 10029165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 462 - 639
Target Start/End: Complemental strand, 20542533 - 20542356
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    ||||||||| ||| | |||||  || |||| |||||||| ||||||||||||||||||  |||||| |||||| ||||||||| |||||| ||||||| |    
T  20542533 agggtcttgctaaacagtgccctcagggcattggttaaggaatctacaaatagaaatttcgtcttggaaatataagatgttacttttgattaagtaatga 20542434  T
Q  562 ttacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 639  Q
    |||||||  |||||| | |||||||||| |||||||||| |||| || ||||||||  |||| ||||| | |||||||    
T  20542433 ttacacacttttttcttaaaaacttactcgttttggatgcttaaccaatgcccttggggcacgggttagcattctcca 20542356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 630
Target Start/End: Complemental strand, 600492 - 600350
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||| ||||| |||||||||||| |  || || |||| |||||| ||||||||| |||||| ||||||| ||| |||||||||||||| ||||||||    
T  600492 ggcaatgattaaggaatctacaaataaattttttggcttggaaatataagatgttacttttgataaagtaatgattgcacaactttttcatgaaaactta 600393  T
Q  588 cttgttttggatgattaagcattgcccttgaagcactggttaa 630  Q
     ||||||| |||| |||| |||||| |||| ||||||||||||    
T  600392 tttgttttagatgtttaaccattgcacttggagcactggttaa 600350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 491 - 605
Target Start/End: Original strand, 18200677 - 18200791
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||| | ||||||| |||||| ||||||| ||||||||| |||||||| ||| |||||||    
T  18200677 aatggttaagaaatctacaaataaaaattttgtcttaaaaatataacatgttacttttgattaagtaatgattacacaattttttcataaaagcttactt 18200776  T
Q  591 gttttggatgattaa 605  Q
     ||||||||| ||||    
T  18200777 attttggatgcttaa 18200791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 491 - 605
Target Start/End: Original strand, 35901412 - 35901526
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||| |||||||||||||||||| ||| |||||||| | ||||||||| ||| || || |||| ||| |||||||||||||| |||||||||||    
T  35901412 aatggttaaggaatctacaaatagaaattttgttttgaaaatgtaagatgttacttttaattaaataatgattgcacaactttttcataaaaacttactt 35901511  T
Q  591 gttttggatgattaa 605  Q
    |||||||||| ||||    
T  35901512 gttttggatgcttaa 35901526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 490 - 574
Target Start/End: Original strand, 3347506 - 3347590
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 574  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||| || ||||||||||||||||||||||    
T  3347506 caatggttaagaaatctacaaataaaaattttgtcttgaaaatataagatgttacttttaataaagtaataattacacaactttt 3347590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 25105711 - 25105797
Alignment:
Q  111 atatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 197  Q
    |||| |||||||||||  ||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||| |||||||||||    
T  25105711 atatgtgcatttatatagtgtatttactacaaaactatagtaatggatgttaccatttattttagaaaatggagataatctcaactc 25105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 599
Target Start/End: Original strand, 42361481 - 42361618
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    ||||||||||||||||||| || || || |||||||||  ||||||  |||||||||| ||||||  |||||| |||||||   ||| || ||||||  |    
T  42361481 agggtcttgttaaccggtgtcttcagggtaatggttaaagaatctattaatagaaattttgtctttgaaatataagatgttcttttttataaagtaaaga 42361580  T
Q  562 ttacacaactttttcattaaaacttacttgttttggat 599  Q
    || |||||||||||||| ||||||||||||||||||||    
T  42361581 ttgcacaactttttcatgaaaacttacttgttttggat 42361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 493 - 638
Target Start/End: Original strand, 17720176 - 17720322
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||  |||||| ||||||||||  | |||||||||||| ||||||||  |||||||| ||||| |||||||||||||||||| |||||||  ||||    
T  17720176 tggttaaagaatctataaatagaaatattttcttgaaaatataagatgttatttttgatcatgtaatgattacacaactttttcatgaaaacttgtttgt 17720275  T
Q  593 tttggatgat--taagcattgcccttgaagcactggttaaccttctcc 638  Q
    |||||||| |  ||| || ||||||||  |||||||||||| ||||||    
T  17720276 tttggatgcttataaccaatgcccttg-ggcactggttaacattctcc 17720322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 462 - 641
Target Start/End: Complemental strand, 11151068 - 11150890
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    ||||||||  |||||||||||  || ||||||| ||||| |||||||||||| || || ||||||  |||||| ||||||||| ||||||||| |||| |    
T  11151068 agggtcttcctaaccggtgccctcagggcaatgattaaggaatctacaaataaaatttttgtcttagaaatataagatgttacttttgatcaaataatga 11150969  T
Q  562 ttacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 641  Q
    |||||||| |||||  | ||||||||||| ||||| ||| |||| || |||||||   ||| |||||| | |||||||||    
T  11150968 ttacacaa-ttttttttaaaaacttacttattttgaatgcttaaccaatgcccttagggcagtggttagcattctccata 11150890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 617
Target Start/End: Original strand, 27506920 - 27507068
Alignment:
Q  467 cttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca 566  Q
    |||| |||| ||||||  |||| ||||||||||  |||||||||||| |||||  || ||| |||||| |||| |||| |||||| || |||||||||||    
T  27506920 cttgctaactggtgccctcaagacaatggttaaagaatctacaaataaaaatt--gttttggaaatataagatattacttttgataaaataataattaca 27507017  T
Q  567 caactttttcattaaaacttacttgttttggatgattaagcattgcccttg 617  Q
    |||||||||||| |||| ||||||||||| ||||  ||| ||||| |||||    
T  27507018 caactttttcatgaaaatttacttgttttagatgcgtaaccattgtccttg 27507068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 493 - 595
Target Start/End: Complemental strand, 547181 - 547075
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagat----gttacatttgatcaagtaataattacacaactttttcattaaaacttac 588  Q
    ||||||||||||   |||||||||||| | |||||||||||| ||||    ||||  ||||||||| ||||||||||||||||||||||||||||| |||    
T  547181 tggttaagaaattcgcaaatagaaattttatcttgaaaatataagataaatgttatttttgatcaaataataattacacaactttttcattaaaacgtac 547082  T
Q  589 ttgtttt 595  Q
    |||||||    
T  547081 ttgtttt 547075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 578
Target Start/End: Complemental strand, 18045406 - 18045313
Alignment:
Q  485 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat 578  Q
    |||||||||||||||  ||||||||| || ||||| |||||||||||||| | ||||||| |||| ||| ||||||||||||||| ||||||||    
T  18045406 caaggcaatggttaaagaatctacaactaaaaattttgtcttgaaaatataatatgttacttttgttcatgtaataattacacaattttttcat 18045313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 491 - 616
Target Start/End: Complemental strand, 41727013 - 41726888
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||| |||||||||||| ||||| ||||||| |||||| | ||||||  ||| || ||||||| |||||| |  |||||||| |||||||||||    
T  41727013 aatggttaaggaatctacaaataaaaattttgtcttggaaatataaaatgttattttttataaagtaatgattacatagttttttcataaaaacttactt 41726914  T
Q  591 gttttggatgattaagcattgccctt 616  Q
     |||| |||| |||| ||||||||||    
T  41726913 attttagatgcttaaccattgccctt 41726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 616
Target Start/End: Complemental strand, 40489969 - 40489842
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||||||||| ||||||||| || ||||| || |||| |||||| | |||||||  ||||| ||||||| |||||| ||||||||||| ||||||||    
T  40489969 ggcaatggttaaggaatctacaa-taaaaattttgccttgtaaatataaaatgttactattgataaagtaatgattacataactttttcataaaaactta 40489871  T
Q  588 cttgttttggatgattaagcattgccctt 616  Q
     ||||||| |||  |||| ||||||||||    
T  40489870 tttgttttagatatttaaccattgccctt 40489842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 638
Target Start/End: Complemental strand, 43917693 - 43917557
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 601  Q
    |||||||||||| || || |||||||||||||| ||  ||||| ||| ||||| |||||||||||||| ||||| || |||| ||||||||||||||||     
T  43917693 aatctacaaataaaatttttgtcttgaaaatataaggcgttacttttaatcaaataataattacacaatttttttataaaaatttacttgttttggatgc 43917594  T
Q  602 ttaagcattgcccttgaagcactggttaaccttctcc 638  Q
    |||| || |  |||| | |||||||||| | ||||||    
T  43917593 ttaaccaatatccttaatgcactggttagcattctcc 43917557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 488 - 595
Target Start/End: Original strand, 6270143 - 6270249
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||||| |||||| ||||||||| || ||||| ||||||| |||||| || |||||  |||||| ||||||| ||||||||||||||| || ||||||||    
T  6270143 ggcaatagttaaggaatctacaattaaaaattttgtcttggaaatataaggtgttat-tttgataaagtaatgattacacaacttttttatgaaaactta 6270241  T
Q  588 cttgtttt 595  Q
    ||||||||    
T  6270242 cttgtttt 6270249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 463 - 599
Target Start/End: Original strand, 23425231 - 23425371
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagat----gttacatttgatcaagtaa 558  Q
    ||||||||||||| ||||||  |   ||| ||||||||||||| | ||||| ||||| |||||  ||||||| ||||    ||||  ||||||||| |||    
T  23425231 gggtcttgttaactggtgccctcggtgcattggttaagaaatccataaataaaaattttgtctcaaaaatataagataaatgttatttttgatcaaataa 23425330  T
Q  559 taattacacaactttttcattaaaacttacttgttttggat 599  Q
    | |||||||||||||||||||||||| ||||||||||||||    
T  23425331 tgattacacaactttttcattaaaacgtacttgttttggat 23425371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 509 - 640
Target Start/End: Original strand, 34678221 - 34678351
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 608  Q
    ||||||||| | |||||||||||| | | ||||||| ||||||||||||||||||||| || ||||| ||||||| || ||||||||| ||| |||| ||    
T  34678221 aaatagaaaatttgtcttgaaaatgtaaaatgttacttttgatcaagtaataattacataa-ttttttattaaaagttgcttgttttgaatgcttaacca 34678319  T
Q  609 ttgcccttgaagcactggttaaccttctccat 640  Q
    ||||| ||| |||| | |||| | ||||||||    
T  34678320 ttgcctttggagcaatagttagcattctccat 34678351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 605
Target Start/End: Complemental strand, 32881226 - 32881116
Alignment:
Q  495 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 594  Q
    ||||||||||||||||||| ||||| |||||| ||||||| |||| |||  ||| ||||||| || |||||||||| ||||  | ||||||||||| |||    
T  32881226 gttaagaaatctacaaataaaaattttgtcttaaaaatataagatattattttttatcaagttatgattacacaacattttattaaaaacttacttattt 32881127  T
Q  595 tggatgattaa 605  Q
    |||||| ||||    
T  32881126 tggatgtttaa 32881116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 613
Target Start/End: Complemental strand, 1342427 - 1342317
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 601  Q
    ||||| |||||||||||| | ||||| |||||| ||||||||| |||||| ||  ||| ||||||||||||||| || ||||||||||| |||| ||||     
T  1342427 aatcttcaaatagaaattttatcttggaaatataagatgttacttttgataaac-aatgattacacaacttttttatgaaaacttacttattttagatgc 1342329  T
Q  602 ttaagcattgcc 613  Q
    |||| |||||||    
T  1342328 ttaaccattgcc 1342317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 629
Target Start/End: Original strand, 23725684 - 23725759
Alignment:
Q  554 agtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggtta 629  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||| |||| || |||||| |  ||||||||||    
T  23725684 agtaatgatcacacaactttttcatgaaaacttacttgttttggatgcttaaccaatgccctgggggcactggtta 23725759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 586
Target Start/End: Complemental strand, 25250401 - 25250321
Alignment:
Q  507 acaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttc-attaaaactt 586  Q
    ||||||||||||| |||||||||||||| | ||||||  |||||||||||||| |||  || |||||||| ||||||||||    
T  25250401 acaaatagaaattttgtcttgaaaatataatatgttatttttgatcaagtaatgattttaccactttttctattaaaactt 25250321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 640
Target Start/End: Complemental strand, 33621478 - 33621340
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| |||||||||||| ||||| |||||| ||||||| | || |||| |||||||||||||| |||  |||| |||     ||||| |||||||||||    
T  33621478 ttaaggaatctacaaataaaaattttgtcttaaaaatataaaattttacttttgatcaagtaattatt--acaatttt----ataaaatttacttgtttt 33621385  T
Q  596 ggatgattaagcattgcccttgaagcactggttaaccttctccat 640  Q
    ||||| |||| || |||||||| |||| || ||| | ||||||||    
T  33621384 ggatgtttaaccaatgcccttggagcattgattagcattctccat 33621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 12981679 - 12981605
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 564  Q
    ||||||||||| |||  | || |||||||| |||||||||||| | ||||||||||||||| |||||||| ||||    
T  12981679 caatggttaaggaattcaaaattagaaattttgtcttgaaaatgtaagatgttacatttgaccaagtaatgatta 12981605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 37561513 - 37561579
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 575  Q
    ||||||||||| | | |||||||||| |||| |||| ||||||||||||||||| |||||| |||||    
T  37561513 aaatagaaattttattttgaaaatataagattttacttttgatcaagtaataatcacacaatttttt 37561579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 488 - 574
Target Start/End: Complemental strand, 40607418 - 40607332
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 574  Q
    ||||||||||||||||| || ||||||||| | | |||| ||||||| || | | || |||||| ||||||||||||||| ||||||    
T  40607418 ggcaatggttaagaaatttataaatagaaaatttatcttaaaaatataagttttgacttttgattaagtaataattacactactttt 40607332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 44947453 - 44947372
Alignment:
Q  501 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 583  Q
    ||||||| ||||| ||||| |||||||||||||| | ||||||| |||||| ||||| | |||| ||||||||||||| ||||    
T  44947453 aaatctataaataaaaatt-tgtcttgaaaatataaaatgttacttttgataaagtattgattatacaactttttcataaaaa 44947372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 597
Target Start/End: Complemental strand, 18131311 - 18131203
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||| |||||||||| | ||||||||| | |||||||||||||| || | | ||   |||| ||||||||||||||| || |||| || |||| |||    
T  18131311 ggcaatgattaagaaatccataaatagaaaatttgtcttgaaaatataagttttgactactgattaagtaataattacactac-ttttaataaaaagtta 18131213  T
Q  588 cttgttttgg 597  Q
    ||||||||||    
T  18131212 cttgttttgg 18131203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 588
Target Start/End: Original strand, 39534107 - 39534231
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||||||||||||||||||| ||  ||||  ||||||  |||||| || ||||| ||||||||||||||||| |  ||| ||  || |||||||||||||    
T  39534107 gggtcttgttaaccggtgcccccg-ggcatgggttaaagaatctataattagaatttctgtcttgaaaatataaactgtcaccctttatcaagtaataat 39534205  T
Q  563 tacacaactttttcattaaaacttac 588  Q
    ||||  ||||||| || |||| ||||    
T  39534206 tacattactttttaataaaaatttac 39534231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 565
Target Start/End: Complemental strand, 12201891 - 12201835
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattac 565  Q
    ||||||||||| ||||||| |||||| || |||||| |||||||||||| |||||||    
T  12201891 aaatagaaattttgtcttggaaatataagctgttacttttgatcaagtattaattac 12201835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 565
Target Start/End: Complemental strand, 12446319 - 12446263
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattac 565  Q
    ||||||||||| ||||||| |||||| || |||||| |||||||||||| |||||||    
T  12446319 aaatagaaattttgtcttggaaatataagctgttacttttgatcaagtattaattac 12446263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 616
Target Start/End: Original strand, 18647470 - 18647581
Alignment:
Q  504 tctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgatt 603  Q
    |||||||||||||||| | |||| ||||||| ||||||||  |||||| || | || ||||||||| ||||||||  ||| |||||||||||  ||| ||    
T  18647470 tctacaaatagaaattttatcttaaaaatataagatgtta-ttttgataaaatgatgattacacaattttttcatggaaatttacttgttttaaatgctt 18647568  T
Q  604 aagcattgccctt 616  Q
    || |||| |||||    
T  18647569 aaccattaccctt 18647581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 597
Target Start/End: Original strand, 44655252 - 44655336
Alignment:
Q  513 agaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 597  Q
    ||||||| ||||||| ||| || || ||||||| |||| |||||||||||||||| |||||||  | |||||||| || ||||||    
T  44655252 agaaattttgtcttggaaaaataagttgttacaattgaccaagtaataattacactactttttattaaaaacttatttattttgg 44655336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 575
Target Start/End: Complemental strand, 4989815 - 4989728
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 575  Q
    |||||||||||||||| ||| ||||| ||| | |||||||||||||| || | | |  ||||||||||||| ||||||| || |||||    
T  4989815 ggcaatggttaagaaaactataaataaaaaatttgtcttgaaaatataagttttgatttttgatcaagtaacaattacataatttttt 4989728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 638
Target Start/End: Complemental strand, 31331105 - 31330970
Alignment:
Q  504 tctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttt-ttcattaaaacttacttgttttggatgat 602  Q
    |||||||||||||||| | ||||  |||||| ||||||||| |||||||||  | | ||||||||||||| || |  || | || ||||||||||||| |    
T  31331105 tctacaaatagaaattttatcttcgaaatataagatgttacttttgatcaaacagtgattacacaactttctttaagaacatttgcttgttttggatgct 31331006  T
Q  603 taagcattgcccttgaagcactggttaaccttctcc 638  Q
    ||| || || ||||  | ||||||||||| ||||||    
T  31331005 taaccaatgtccttagaacactggttaacattctcc 31330970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 40604241 - 40604282
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaat 532  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||    
T  40604241 aatggttaagaaatctacaaatataaattttgttttgaaaat 40604282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 547 - 595
Target Start/End: Original strand, 10652793 - 10652841
Alignment:
Q  547 ttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| ||||||| |||||||||| ||||||| |||| |||||||||||    
T  10652793 ttgataaagtaatgattacacaacattttcataaaaatttacttgtttt 10652841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 628
Target Start/End: Original strand, 23797507 - 23797626
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactt-acttgttttggatgattaagc 607  Q
    |||||||| || | |||||||||||| |  ||| ||| |||| |||||||||||| ||  |||||| |||||||| || ||||||||| | || |||| |    
T  23797507 aaatagaagttttatcttgaaaatataaattgtcacacttgaccaagtaataatttcatcactttt-cattaaaaatttacttgttttagttgtttaacc 23797605  T
Q  608 attgcccttgaagcactggtt 628  Q
    ||||||||| | |||||||||    
T  23797606 attgcccttaatgcactggtt 23797626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 4e-37; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 488 - 631
Target Start/End: Complemental strand, 49261900 - 49261757
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||||||| |||||||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||| |||||||| ||||  ||    
T  49261900 ggcactggttaagaaatatacaaatagaaattttgtcttgtaaatataagatgttacttttgatagagtaataattacacaattttttcatgaaaatgta 49261801  T
Q  588 cttgttttggatgattaagcattgcccttgaagcactggttaac 631  Q
    ||||||||||||| |||| |||||| |||| |||||||||||||    
T  49261800 cttgttttggatgcttaaccattgctcttggagcactggttaac 49261757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 491 - 612
Target Start/End: Complemental strand, 44698335 - 44698214
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| || |||| ||||||||| |||||||| |||||||| ||    
T  44698335 aatggttaagaaatctacaaatagaaattttgtcttgaaaatataagatgttacttttgataaaataatgattacacaattttttcataaaaacttattt 44698236  T
Q  591 gttttggatgattaagcattgc 612  Q
    ||||| |||  |||| ||||||    
T  44698235 gttttagatatttaaccattgc 44698214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 490 - 597
Target Start/End: Complemental strand, 4020216 - 4020109
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| | ||||||  |||||| ||||||| ||||||||| |||||||| ||||||||||    
T  4020216 caatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaaacttact 4020117  T
Q  590 tgttttgg 597  Q
    ||||||||    
T  4020116 tgttttgg 4020109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 461 - 605
Target Start/End: Original strand, 6785760 - 6785905
Alignment:
Q  461 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 560  Q
    |||||| ||| ||||| |||||  || ||||||||||||| | ||||||||||||| || |||||||||||||| | ||||||| ||||||||||||||     
T  6785760 aagggtattgctaaccagtgccctcagggcaatggttaaggattctacaaatagaatttttgtcttgaaaatataaaatgttacttttgatcaagtaatg 6785859  T
Q  561 attacacaac-tttttcattaaaacttacttgttttggatgattaa 605  Q
    |||||||| | |||||||| ||||||| |||||||| |||| ||||    
T  6785860 attacacatcttttttcatgaaaacttgcttgtttttgatgtttaa 6785905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 509 - 638
Target Start/End: Complemental strand, 48338912 - 48338783
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 608  Q
    ||||||||||| | ||||| |||||| ||||||||  |||||| ||||||| ||||||||||||||| || ||||||||||||||||||||| |||| ||    
T  48338912 aaatagaaattttatcttggaaatataagatgttatttttgataaagtaattattacacaacttttttataaaaacttacttgttttggatgcttaacca 48338813  T
Q  609 ttgcccttgaagcactggttaaccttctcc 638  Q
    ||||||||  |||||| |||| | ||||||    
T  48338812 ttgcccttagagcactagttagcattctcc 48338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 595
Target Start/End: Complemental strand, 29032525 - 29032425
Alignment:
Q  495 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 594  Q
    |||||| | |||||||| ||||||| |||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  29032525 gttaaggattctacaaacagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacacaactttttcataaaaacttgcttgttt 29032426  T
Q  595 t 595  Q
    |    
T  29032425 t 29032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 460 - 639
Target Start/End: Original strand, 42437681 - 42437858
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    ||||||||||| ||||| |||||  || ||||||||||||| | |||||||||||||||| | ||||| || ||| ||||||||| |||||||  |||||    
T  42437681 aaagggtcttgataaccagtgccctcagggcaatggttaaggattctacaaatagaaattttatcttggaattataagatgttacttttgatc--gtaat 42437778  T
Q  560 aattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 639  Q
     |||||| ||||||||||| |||  || | ||||||||||| |||| || ||||||||  |||||||||| | |||||||    
T  42437779 gattacataactttttcataaaattttgcgtgttttggatgcttaaccaatgcccttggggcactggttagcattctcca 42437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 508 - 611
Target Start/End: Complemental strand, 50958960 - 50958857
Alignment:
Q  508 caaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagc 607  Q
    |||||||||||| ||||||| |||||| | ||||||  |||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  50958960 caaatagaaattttgtcttggaaatataacatgttatttttgatcaagaaatgattacacaattttttcataaaaacttacttgttttggatgcttaagc 50958861  T
Q  608 attg 611  Q
    ||||    
T  50958860 attg 50958857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 616
Target Start/End: Original strand, 635700 - 635826
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| |||||||||||||||||| ||||||||| | || ||||||||| |||||| || |||| ||||||||||||||  || ||||||||      
T  635700 caatggttaaggaatctacaaatagaaattttgtcttgaataaataagatgttacttttgattaaataatgattacacaacttttcaataaaaacttata 635799  T
Q  590 tgttttggatgattaagcattgccctt 616  Q
    ||||||||||| |||| || |||||||    
T  635800 tgttttggatgcttaaccaatgccctt 635826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 488 - 639
Target Start/End: Complemental strand, 38359167 - 38359016
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||||||||| |||||| ||||| ||||| | ||||  |||||| ||||||||  |||||| ||||||  ||||| || ||||||||| ||||||||    
T  38359167 ggcaatggttaaggaatctataaataaaaattttatcttagaaatataagatgttaattttgataaagtaacgattacccatctttttcatgaaaactta 38359068  T
Q  588 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 639  Q
    ||| |||| |||| |||| |||||||||||| ||| | |||||| |||||||    
T  38359067 cttattttagatgtttaaccattgcccttgaggcattagttaacattctcca 38359016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 486 - 616
Target Start/End: Original strand, 11676727 - 11676857
Alignment:
Q  486 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaact 585  Q
    |||||| || ||||| |||||||||||| ||||| |||||||||||||  ||| ||||| ||||||||| |||| || |||||| |||||| | ||||||    
T  11676727 aaggcattgattaaggaatctacaaatataaattttgtcttgaaaataaaagacgttacttttgatcaaataatgataacacaattttttcttgaaaact 11676826  T
Q  586 tacttgttttggatgattaagcattgccctt 616  Q
    | ||||||||||||| |||| || |||||||    
T  11676827 tgcttgttttggatgtttaaccaatgccctt 11676857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 617
Target Start/End: Original strand, 54801336 - 54801452
Alignment:
Q  501 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 600  Q
    ||||||||| ||| ||| | | |||||||||||| ||||||||| |||| | ||||||||||||||||| |||||||| ||||||||||| ||||| |||    
T  54801336 aaatctacatataaaaaatttatcttgaaaatataagatgttacttttgctaaagtaataattacacaattttttcataaaaacttacttattttgtatg 54801435  T
Q  601 attaagcattgcccttg 617  Q
     ||||  ||||||||||    
T  54801436 cttaactattgcccttg 54801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 605
Target Start/End: Original strand, 28709559 - 28709676
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||||||||  |||||| ||||||||||| | |||||||||||| | ||||||| ||||||||| |||| |||| |||||||||| ||  |||||||    
T  28709559 ggcaatggttaaagaatctataaatagaaattttatcttgaaaatataaaatgttacttttgatcaaataatgattatacaacttttttatagaaactta 28709658  T
Q  588 cttgttttggatgattaa 605  Q
    ||| ||||| ||| ||||    
T  28709659 cttattttgaatgcttaa 28709676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 638
Target Start/End: Original strand, 4128724 - 4128836
Alignment:
Q  526 tgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactg 625  Q
    ||||||||| |||| |||  |||||| ||||||| |||||||||  ||||||| ||||||||||||||||||||| |||| |||||||||||  |||| |    
T  4128724 tgaaaatataagatattatttttgataaagtaatgattacacaatattttcatgaaaacttacttgttttggatgcttaaccattgcccttggggcaccg 4128823  T
Q  626 gttaaccttctcc 638  Q
    |||| | ||||||    
T  4128824 gttagcattctcc 4128836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 640
Target Start/End: Original strand, 44291197 - 44291374
Alignment:
Q  461 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 560  Q
    |||||||||||||||| ||||| ||  |||| |||||||| |||||| |||||||| |||||||||| |||||| |  ||| || ||| || ||||||||    
T  44291197 aagggtcttgttaaccagtgcc-ccggggcactggttaaggaatctataaatagaatttctgtcttggaaatataaactgtcactttttattaagtaata 44291295  T
Q  561 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccat 640  Q
    ||||||  ||||||| || || |||||||| |||||| || |||| || |||||  |  |||||||||||| ||||||||    
T  44291296 attacattactttttaataaatacttacttcttttgg-tgcttaaccaatgccccgggggcactggttaacattctccat 44291374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 502 - 605
Target Start/End: Complemental strand, 55446838 - 55446736
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatga 601  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||| ||| || ||||||| ||||||||||||||| || ||||||||||| |||| ||||     
T  55446838 aatctacaaataaaaattttgtcttggaaatataagatgttacttttaataaagtaatgattacacaacttttt-ataaaaacttacttcttttagatgt 55446740  T
Q  602 ttaa 605  Q
    ||||    
T  55446739 ttaa 55446736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 605
Target Start/End: Complemental strand, 12109763 - 12109653
Alignment:
Q  495 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 594  Q
    |||||| | |||||||||||||||| ||| |||||||||| |||| |||| ||| |  |||||||||||| ||||||||||||| |||| ||  ||||||    
T  12109763 gttaaggattctacaaatagaaattatgttttgaaaatataagatattacttttaactaagtaataattatacaactttttcataaaaaattgtttgttt 12109664  T
Q  595 tggatgattaa 605  Q
    |||||| ||||    
T  12109663 tggatgcttaa 12109653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 496 - 637
Target Start/End: Original strand, 34145906 - 34146046
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||||||| ||| |||| ||||| ||| ||| |||||| ||||||||  ||||||||||||||||||| |||| || |||| ||||| ||||| |||||    
T  34145906 ttaagaaatttactaatataaattttgtgttggaaatataagatgttatttttgatcaagtaataattatacaatttgttca-taaaatttactagtttt 34146004  T
Q  596 ggatgattaagcattgcccttgaagcactggttaaccttctc 637  Q
    ||||| |||| || ||| |||| | ||| ||||||| |||||    
T  34146005 ggatgcttaatcaatgctcttggaacaccggttaacattctc 34146046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 491 - 595
Target Start/End: Complemental strand, 8326254 - 8326151
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    ||||||||| |||||| |||||||||||| ||| || ||||||| | ||||||| |||||||||| ||| ||||||| || ||||||| |||||||| ||    
T  8326254 aatggttaataaatcttcaaatagaaattttgttttaaaaatataatatgttacttttgatcaagcaatgattacaccac-ttttcataaaaacttattt 8326156  T
Q  591 gtttt 595  Q
    |||||    
T  8326155 gtttt 8326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 1711919 - 1711993
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 564  Q
    ||||||||||| |||||| || || ||||| |||||||||||||| |||||||||||||||  ||||||||||||    
T  1711919 caatggttaaggaatctaaaattataaattttgtcttgaaaatataagatgttacatttgactaagtaataatta 1711993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 18391942 - 18392010
Alignment:
Q  128 atgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaact 196  Q
    |||||||||||||||||||||||||| |  | |||||||||||| ||  ||||||||||||||||||||    
T  18391942 atgtatttactacaaaactatagtaatgggttttgccatttattataggaaatggagagaatctcaact 18392010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 490 - 605
Target Start/End: Original strand, 26613060 - 26613176
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac-tttttcattaaaacttac 588  Q
    ||||||||||| |||||||||||| |  || |||||   |||||| | ||||||  ||| ||||||||||||||||| ||| ||||| || |||||||||    
T  26613060 caatggttaaggaatctacaaataaatgttttgtctcagaaatataaaatgttatttttaatcaagtaataattacataactttttttatgaaaacttac 26613159  T
Q  589 ttgttttggatgattaa 605  Q
    |||||||||||| ||||    
T  26613160 ttgttttggatgcttaa 26613176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 521 - 605
Target Start/End: Original strand, 31494031 - 31494115
Alignment:
Q  521 tgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
    ||||||| |||||| ||| ||||  ||| ||||| |||| ||||||||| |||||||| ||||||||||||||||||||| ||||    
T  31494031 tgtcttggaaatataagaagttaattttaatcaaataatgattacacaattttttcataaaaacttacttgttttggatgtttaa 31494115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 25319562 - 25319466
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
    ||||| ||||| ||| |||||||||| | ||||||| |||||  || |||| |||||||| ||||| |||||||||||| ||||||| |||| ||||    
T  25319562 aaataaaaattttgtattgaaaatataaaatgttacttttgactaaataatgattacacaccttttacattaaaacttaattgttttagatgtttaa 25319466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 509 - 596
Target Start/End: Original strand, 2379619 - 2379705
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttg 596  Q
    ||||||||| |||||||||||||| | || |||| | ||| ||||||||| |||||||| ||||||| || ||||||||||| |||||    
T  2379619 aaatagaaactctgtcttgaaaatgtaagttgttcc-tttaatcaagtaagaattacactactttttaataaaaacttacttattttg 2379705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 496 - 575
Target Start/End: Original strand, 25958060 - 25958139
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 575  Q
    |||||||||||||| ||| ||| | |||||| ||||||| ||||||||| |||||| ||||||  ||||||||| |||||    
T  25958060 ttaagaaatctacatataaaaaatttgtcttaaaaatataagatgttacttttgataaagtaacgattacacaatttttt 25958139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 53818884 - 53818829
Alignment:
Q  550 atcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
    |||||||||| |||| |||||||||||||||||||||| || ||||||||| ||||    
T  53818884 atcaagtaatgattatacaactttttcattaaaacttatttattttggatgcttaa 53818829  T

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Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 54697932 - 54697995
Alignment:
Q  122 tatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggaga 185  Q
    |||||||| ||||||||||||||||||||||||| || || | |||||| ||||||||| ||||    
T  54697932 tatatcatatatttactacaaaactatagtaacggatatttcaatttatcttaaaaaatagaga 54697995  T

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Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 516
Target Start/End: Complemental strand, 27144145 - 27144092
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaa 516  Q
    ||||||||||||||||||||  | ||||| ||||||||||||||| ||||||||    
T  27144145 gggtcttgttaaccggtgccctcgaggcactggttaagaaatctataaatagaa 27144092  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 561
Target Start/End: Complemental strand, 3215147 - 3215088
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    |||| ||||||||||| | | |||||||||||| ||||||| | ||||||||||||||||    
T  3215147 aatccacaaatagaaactttatcttgaaaatataagatgttgcttttgatcaagtaataa 3215088  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 590
Target Start/End: Original strand, 15671110 - 15671212
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||| |||||| ||||| || || ||||||  |||||| |  ||| || ||| |||||||||||||||||  ||||||| || ||||||||    
T  15671110 ggcactggttaaggaatctataaataaaatttttgtcttcgaaatataaactgtcactttttatcaagtaataattacattactttttaataaaaactta 15671209  T
Q  588 ctt 590  Q
    |||    
T  15671210 ctt 15671212  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 537 - 591
Target Start/End: Original strand, 37043028 - 37043082
Alignment:
Q  537 gatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttg 591  Q
    ||||||||||||||||||||||| |||| || |||||||  | ||||||||||||    
T  37043028 gatgttacatttgatcaagtaatgattatactactttttattaaaaacttacttg 37043082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 590
Target Start/End: Original strand, 17109533 - 17109630
Alignment:
Q  494 ggttaagaaatctacaaatagaaatt-ctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    ||||||||||| || |||||||| || || ||||| |||||| |  ||| |||||| || |||||||||||||| |||||||| || |||| ||||||    
T  17109533 ggttaagaaatttataaatagaattttctatcttggaaatataaactgtaacattttattaagtaataattacataactttttaataaaaatttactt 17109630  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 525 - 605
Target Start/End: Original strand, 33051578 - 33051658
Alignment:
Q  525 ttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
    |||||||||| | || |||  ||| |||||||||| ||||| ||| ||||| ||||||||||| | |||||||||| ||||    
T  33051578 ttgaaaatataaaatattattttttatcaagtaatgattactcaatttttttattaaaacttattagttttggatgtttaa 33051658  T

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Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 488 - 638
Target Start/End: Original strand, 40574136 - 40574286
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||| |||||||||||||||||| ||||||| |||||| | |||| || ||||||  ||||||||||||||||||||||||| ||||  ||    
T  40574136 ggcactggttaaggaatctacaaatagaaattttgtcttggaaatataaaatgtaacttttgatagagtaataattacacaactttttcatgaaaatgta 40574235  T
Q  588 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    ||||||||||||| |||| |||||||||||  |||||||||| | ||||||    
T  40574236 cttgttttggatgcttaaccattgcccttggggcactggttagcattctcc 40574286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 465 - 618
Target Start/End: Complemental strand, 13717320 - 13717168
Alignment:
Q  465 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 564  Q
    ||||||||||||||||||  ||  ||||| |||||| ||| |||||||||||||| |||||||||||||| | ||||||  ||| || ||||||||||||    
T  13717320 gtcttgttaaccggtgccctcagagcaatagttaaggaatatacaaatagaaattttgtcttgaaaatataaaatgttatttttaat-aagtaataatta 13717222  T
Q  565 cacaactttttcattaaaacttacttgttttggatgattaagcattgcccttga 618  Q
    || |||||||| || ||||||||||| |||| |||| |||| |||| |||||||    
T  13717221 cataactttttgatgaaaacttacttattttagatgcttaaccattacccttga 13717168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 491 - 599
Target Start/End: Complemental strand, 40346825 - 40346717
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||| |||||||| ||||||||| ||| |||||||||| ||||||||  ||||||||| |||| ||| |||||||||||||| |||||||||||    
T  40346825 aatggttaaggaatctacatatagaaattttgtattgaaaatataagatgttatttttgatcaaataatgattgcacaactttttcataaaaacttactt 40346726  T
Q  591 gttttggat 599  Q
     ||||||||    
T  40346725 attttggat 40346717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 599
Target Start/End: Complemental strand, 23453463 - 23453353
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt-cattaaaacttac 588  Q
    |||| |||||| |||||||||||| ||||| |||||||||||||| ||||||||| ||||||||| |||  ||||||||||||||| ||| ||||||| |    
T  23453463 caatagttaaggaatctacaaataaaaattttgtcttgaaaatataagatgttacttttgatcaaataaagattacacaactttttccataaaaacttgc 23453364  T
Q  589 ttgttttggat 599  Q
    |||||||||||    
T  23453363 ttgttttggat 23453353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 493 - 605
Target Start/End: Original strand, 4978750 - 4978862
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    ||||||| |||||||  ||||||| || |||||||||||||| ||||||||| |||||||||||||| |||||||||| |||| || |||||||| || |    
T  4978750 tggttaaaaaatctattaatagaagttttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttat 4978849  T
Q  593 tttggatgattaa 605  Q
    |||||||| ||||    
T  4978850 tttggatgtttaa 4978862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 613
Target Start/End: Original strand, 6462586 - 6462709
Alignment:
Q  489 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 588  Q
    ||||||||||| ||| ||||||||||||||||||||||  |||||| | || |||| |||||| || ||||||||| |||||||||| |||||||||||     
T  6462586 gcaatggttaaaaaa-ctacaaatagaaattctgtcttataaatataaaatattacttttgataaaataataattatacaacttttttattaaaacttat 6462684  T
Q  589 ttgttttggatgattaagcattgcc 613  Q
    |||||||| ||| |||| |||||||    
T  6462685 ttgttttgaatgcttaatcattgcc 6462709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 493 - 605
Target Start/End: Original strand, 13738393 - 13738505
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||| |||||| ||||| ||||| ||| |||||||||| ||||||||| | |||| ||||||| ||||||||| ||||| || |||||||||||||    
T  13738393 tggttaaggaatctataaataaaaattttgttttgaaaatataagatgttacttctgataaagtaatgattacacaatttttttataaaaacttacttgt 13738492  T
Q  593 tttggatgattaa 605  Q
    |||||||| ||||    
T  13738493 tttggatgcttaa 13738505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 493 - 605
Target Start/End: Complemental strand, 18717965 - 18717853
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||| ||| |||||||||||||| | | || ||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||| ||  ||||    
T  18717965 tggttaaggaatttacaaatagaaattttattttaaaaatataagatgttacttttgatcaagtaatgattacacaactttttcatgaaaatttgtttgt 18717866  T
Q  593 tttggatgattaa 605  Q
    |||||||| ||||    
T  18717865 tttggatgcttaa 18717853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 490 - 638
Target Start/End: Complemental strand, 41436443 - 41436295
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||| ||||| ||| |||| ||||||||| | ||||  || ||| ||||||||  |||||| || |||| |||||||||||||||||| ||||||||||    
T  41436443 caatgattaagtaatttacatatagaaattttatcttagaagtataagatgttatttttgataaaataatgattacacaactttttcatgaaaacttact 41436344  T
Q  590 tgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    ||||||||||| |||| ||||||| |||  |||||| ||||| ||||||    
T  41436343 tgttttggatgcttaaccattgcctttggggcactgattaacattctcc 41436295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 463 - 629
Target Start/End: Complemental strand, 4557717 - 4557550
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||||||| ||| |||||||  || ||||||||||||  |||||||||||||||||| | ||||| |||||| ||| ||||  ||||||  |||||| ||    
T  4557717 gggtcttgctaagcggtgccctcagggcaatggttaaagaatctacaaatagaaattttatcttggaaatataagaagttatttttgattgagtaattat 4557618  T
Q  563 tacacaac-tttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggtta 629  Q
    ||| |||| |||||||| ||||||||||| | ||||||| |||| ||||||||||   ||||||||||    
T  4557617 tactcaacttttttcataaaaacttacttatcttggatgcttaaccattgcccttagggcactggtta 4557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 4996666 - 4996770
Alignment:
Q  501 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 600  Q
    |||||||  ||||||| || |||||||||||||| ||||||||| |||||||||||||| |||||||||| |||| || |||||||| || |||||||||    
T  4996666 aaatctattaatagaagttttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacatttttataaaaacttatttattttggatg 4996765  T
Q  601 attaa 605  Q
     ||||    
T  4996766 tttaa 4996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 491 - 613
Target Start/End: Original strand, 1004771 - 1004892
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||| |||||||||||||||||| |||||||||||||| | || |||| |||||| || | || |||||||||||||||||| |||||||  ||    
T  1004771 aatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatattacttttgat-aaattatgattacacaactttttcataaaaactttttt 1004869  T
Q  591 gttttggatgattaagcattgcc 613  Q
    ||||| |||  |||| |||||||    
T  1004870 gttttagatccttaaccattgcc 1004892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 575
Target Start/End: Complemental strand, 4186490 - 4186405
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 575  Q
    |||| ||||||||||||||||||| ||||| | | |||||||||| | ||||||||||||||| |||||||||||||||| |||||    
T  4186490 caatagttaagaaatctacaaataaaaattttattttgaaaatataaaatgttacatttgatctagtaataattacacaatttttt 4186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 605
Target Start/End: Original strand, 38024190 - 38024290
Alignment:
Q  504 tctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgatt 603  Q
    |||||||||||||||| | |||| ||||||| |||| |||| ||||||||| ||||||||||| |||||||||||||||||   ||||||||||||| ||    
T  38024190 tctacaaatagaaattttatcttaaaaatataagatattac-tttgatcaaataataattacataactttttcattaaaacgggcttgttttggatgttt 38024288  T
Q  604 aa 605  Q
    ||    
T  38024289 aa 38024290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 639
Target Start/End: Complemental strand, 8580631 - 8580481
Alignment:
Q  489 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 588  Q
    |||||||||||  | |||| |||||||| |  ||||||| |||||| ||||||||| |||||| |||||||||||| |||  |||||||| |||||| ||    
T  8580631 gcaatggttaaagattctataaatagaattgttgtcttggaaatataagatgttacttttgattaagtaataattagacacatttttcatgaaaactaac 8580532  T
Q  589 ttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 639  Q
    ||  |||||||| |||| || |||||||   |||||||||| | |||||||    
T  8580531 ttactttggatgcttaaccaatgcccttagggcactggttagcattctcca 8580481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 463 - 595
Target Start/End: Original strand, 1870462 - 1870593
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||||||| ||||| |||||  || ||||||||||||| || ||| ||||||||| | |||||||||||||| || | | || |||||| ||||||||||    
T  1870462 gggtcttgctaaccagtgccctcagggcaatggttaaggaaactataaatagaaaatttgtcttgaaaatataagctttgacttttgattaagtaataat 1870561  T
Q  563 tacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| | ||||| || |||| |||||||||||    
T  1870562 tacac-atttttttataaaaagttacttgtttt 1870593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 525 - 629
Target Start/End: Complemental strand, 6315970 - 6315866
Alignment:
Q  525 ttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcact 624  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||| ||||| |  |||| ||| |||||||||||| |||| || ||| |||| ||||||    
T  6315970 ttgaaaatataagatgttatttttgatcaagtaatgattacacaatttttttacaaaaatttatttgttttggatgtttaaccaatgctcttggagcact 6315871  T
Q  625 ggtta 629  Q
    |||||    
T  6315870 ggtta 6315866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 643
Target Start/End: Original strand, 3689585 - 3689765
Alignment:
Q  461 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 560  Q
    |||||||||||||| | |||||  |  | ||||||||||| | |||||||||||||||| | ||||  |||||| ||||||||| |||||||  |||||     
T  3689585 aagggtcttgttaatcagtgccctcgggacaatggttaaggattctacaaatagaaattttatctttgaaatataagatgttacttttgatc--gtaatg 3689682  T
Q  561 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccataaa 643  Q
    |||||| |||||| |||| |||   | |||||||||| || |||| || ||||||||  |||||||||| | |||||| ||||    
T  3689683 attacataactttatcataaaattgtgcttgttttggctgcttaaccaatgcccttggggcactggttagcattctccttaaa 3689765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 8442695 - 8442616
Alignment:
Q  118 catttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 197  Q
    ||||||||||||||||||||||||||| |||||||| |||  ||||||||||||  || |||| |||||||||| |||||    
T  8442695 catttatatcatgtatttactacaaaattatagtaatgaaaattgccatttattcaaagaaattgagagaatctgaactc 8442616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 605
Target Start/End: Complemental strand, 18857552 - 18857437
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||| |||||||| ||| ||||| ||| | |||||| ||||||||| ||||||  |||||| ||||||||||||||| |  ||||||| |||| |||||    
T  18857552 caatgattaagaaaactataaataaaaagtttgtcttaaaaatatgatatgttatctttgataaagtaataattacacgatattttcatgaaaatttact 18857453  T
Q  590 tgttttggatgattaa 605  Q
    ||||||| ||| ||||    
T  18857452 tgttttgaatgcttaa 18857437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 610
Target Start/End: Original strand, 32909404 - 32909523
Alignment:
Q  494 ggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac---tttttcattaaaacttactt 590  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| |||| |||| |||||| ||||||| |||||| |||   ||||| || |||||||| ||    
T  32909404 ggttaagaaatatacaaatataaattttgtcttggaaatataagatattacttttgataaagtaattattacataacatttttttaataaaaacttattt 32909503  T
Q  591 gttttggatgattaagcatt 610  Q
     ||||||||| |||| ||||    
T  32909504 attttggatgcttaatcatt 32909523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 463 - 590
Target Start/End: Complemental strand, 19889891 - 19889763
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaa-attctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    |||| |||||||||| |||||||  |||| ||||||||||||||| ||||||||  || ||| ||| |||||| | |||| || ||| || |||||||||    
T  19889891 gggtattgttaaccgatgcctccggggcactggttaagaaatctataaatagaattttatgttttggaaatataatatgtcaccttttattaagtaataa 19889792  T
Q  562 ttacacaactttttcattaaaacttactt 590  Q
    |||||  ||||||| || |||||||||||    
T  19889791 ttacattactttttaatgaaaacttactt 19889763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 529 - 597
Target Start/End: Complemental strand, 27896542 - 27896474
Alignment:
Q  529 aaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 597  Q
    |||||| || |||||| ||||||  |||||||||||||||||||||| |||||||||||||| ||||||    
T  27896542 aaatataagctgttacttttgatttagtaataattacacaactttttaattaaaacttacttattttgg 27896474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 567
Target Start/End: Complemental strand, 13835984 - 13835877
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    |||| ||||||||||||   |||  ||||| ||||||||||||| ||| ||||||||| |||||||||||||||| || | | || ||| || |||||||    
T  13835984 aaagagtcttgttaacccacgccctcaaggtaatggttaagaaaactataaatagaaaatctgtcttgaaaatataagttttgactttttattaagtaat 13835885  T
Q  560 aattacac 567  Q
    ||||||||    
T  13835884 aattacac 13835877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 589
Target Start/End: Original strand, 3201134 - 3201232
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    |||||||||| ||||||||  ||||| || | |||||||||||||| || |||| |||||| || |||| ||||||||| ||||| || ||||||||||    
T  3201134 aatggttaaggaatctacatgtagaagttttatcttgaaaatatgaaatattacttttgattaactaatgattacacaattttttgataaaaacttact 3201232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 605
Target Start/End: Original strand, 28331270 - 28331364
Alignment:
Q  511 atagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
    |||||| || ||||||| |||||| | || |||  |||||||||||||| ||||||||||| |||||| ||||||||||| ||||| ||| ||||    
T  28331270 atagaagttttgtcttggaaatataaaatattatttttgatcaagtaatgattacacaactctttcataaaaacttacttattttgaatgcttaa 28331364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 618
Target Start/End: Complemental strand, 42251654 - 42251597
Alignment:
Q  561 attacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttga 618  Q
    ||||||||||||||||||  |||||||||||||||||||| |||| || |||||||||    
T  42251654 attacacaactttttcatgtaaacttacttgttttggatgcttaaccaatgcccttga 42251597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 595
Target Start/End: Original strand, 7932884 - 7932991
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||| ||||  |||||||||||||||||| ||| ||  |||| | |||| |||| || ||| ||||||| ||| |||||||||||| | ||||||||    
T  7932884 ggcaatgattaaagaatctacaaatagaaattttgttttagaaatgtaagattttactttggataaagtaatgattgcacaactttttcgtaaaaactta 7932983  T
Q  588 cttgtttt 595  Q
    ||| ||||    
T  7932984 cttatttt 7932991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 490 - 605
Target Start/End: Original strand, 42551958 - 42552072
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| |||||||||||| || || ||||||||| |||| | || |||  ||| ||||| |||  ||| |||| ||||||||| ||||||||||    
T  42551958 caatggttaaggaatctacaaataaaatttttgtcttgaagatat-aaatattattttttatcaaataacgattgcacatctttttcataaaaacttact 42552056  T
Q  590 tgttttggatgattaa 605  Q
    ||||||| ||| ||||    
T  42552057 tgttttgtatgtttaa 42552072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 597
Target Start/End: Original strand, 43131810 - 43131861
Alignment:
Q  546 tttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 597  Q
    |||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  43131810 tttgatcaagtaataattacactacctttttataaaaacttacttgttttgg 43131861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 3960856 - 3960934
Alignment:
Q  116 tgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaa 194  Q
    |||||||||||||||||||||| ||||||||||||||| | |  ||  |||||||  || ||||||||||| |||||||    
T  3960856 tgcatttatatcatgtatttaccacaaaactatagtaatggacattatcatttatcgtagaaaatggagaggatctcaa 3960934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 544
Target Start/End: Complemental strand, 36087488 - 36087407
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttac 544  Q
    |||||||| ||||  |||||  || ||||||||||||| |||||||||||||||||| | ||||  |||||| |||||||||    
T  36087488 gggtcttgctaactagtgccctcagggcaatggttaaggaatctacaaatagaaattttatcttagaaatataagatgttac 36087407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 605
Target Start/End: Original strand, 43080296 - 43080415
Alignment:
Q  485 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaac 584  Q
    |||| ||||||||||| | || ||||||||||| | ||||||| ||| || ||||||||| ||||| | | | || ||||||||| |||||||| ||||     
T  43080296 caagccaatggttaaggattccacaaatagaaaatgtgtcttggaaacataagatgttacttttga-ctaattatgattacacaattttttcataaaaat 43080394  T
Q  585 ttacttgttttggatgattaa 605  Q
    ||  |||||||||||| ||||    
T  43080395 ttgattgttttggatgcttaa 43080415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 605
Target Start/End: Complemental strand, 17641291 - 17641177
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||| |||||| ||||| ||| | ||| ||  |||||| | ||||||| |||||| ||| ||| ||| ||||||||||  || |||||||||||    
T  17641291 aatggttaaggaatctataaataaaaactttgtttttgaaatataaaatgttacttttgataaagaaattattgcacaacttttcaatgaaaacttactt 17641192  T
Q  591 gttttggatgattaa 605  Q
     |||| |||| ||||    
T  17641191 attttagatgcttaa 17641177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 26674187 - 26674105
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatct 191  Q
    |||||| || |||||||||||||||||||| |||||| ||||||| | |   |  |||||||||||  |||||||||||||||    
T  26674187 aaatatgtgtatttatatcatgtatttactccaaaacgatagtaatggacactatcatttattttaggaaatggagagaatct 26674105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 37940462 - 37940492
Alignment:
Q  123 atatcatgtatttactacaaaactatagtaa 153  Q
    |||||||||||||||||||||||||||||||    
T  37940462 atatcatgtatttactacaaaactatagtaa 37940492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 7669246 - 7669194
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgtta 543  Q
    |||||||||||||| || ||||| ||||| |||||| ||||||| ||||||||    
T  7669246 aatggttaagaaatttaaaaataaaaattttgtcttaaaaatataagatgtta 7669194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 22311755 - 22311667
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 197  Q
    |||||| |||||||||||||| |||||||   ||||||||||||| | |  |||| ||||||| ||  ||||| |||| ||||||||||    
T  22311755 aaatatgtgcatttatatcatttatttacacgaaaactatagtaatggacattgcaatttattgtagcaaatgaagaggatctcaactc 22311667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 389 - 433
Target Start/End: Original strand, 31380553 - 31380597
Alignment:
Q  389 gttgatataaatggacacatggctagtgatcttaaaatcaatgaa 433  Q
    |||||||||||||||||| |||||| | ||| |||||||||||||    
T  31380553 gttgatataaatggacacgtggctaatcatcctaaaatcaatgaa 31380597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 36168716 - 36168676
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactata 149  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  36168716 aaatatatgcatttatatcatttatttattccaaaactata 36168676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 631
Target Start/End: Original strand, 46295838 - 46296007
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    ||||||||| ||||| || ||| |  ||||||||||||| |||||||||||| ||||| | |||||||||||| | ||||||| |||||||||||||| |    
T  46295838 agggtcttgctaaccagtaccttcggggcaatggttaaggaatctacaaataaaaattttatcttgaaaatataaaatgttacttttgatcaagtaatca 46295937  T
Q  562 ttacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaac 631  Q
    | ||||||||||||||| |||||||| |||||||||||| ||||  | | |||||||| || ||||||||    
T  46295938 tgacacaactttttcataaaaacttatttgttttggatgcttaacaaatacccttgaaacattggttaac 46296007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 490 - 641
Target Start/End: Original strand, 13969094 - 13969245
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    |||| |||||| |||||||||||||||||| |||||||||||||| | ||||||| ||| || ||||||| ||||||||| |||||||| ||||||||||    
T  13969094 caatagttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaaacttact 13969193  T
Q  590 tgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 641  Q
    |||||||| || |||| || | | ||||  |||||||||||| |||||||||    
T  13969194 tgttttggttgcttaaccaatactcttggggcactggttaacattctccata 13969245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 488 - 615
Target Start/End: Complemental strand, 26829612 - 26829485
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||||||||||||| ||||| |||||||| ||||||| |||||| ||||||||| |||||| ||||||| |||||||||||||||||| |||| |||    
T  26829612 ggcaatggttaagaaatttacaattagaaattttgtcttggaaatataagatgttacttttgataaagtaatgattacacaactttttcatgaaaattta 26829513  T
Q  588 cttgttttggatgattaagcattgccct 615  Q
    ||| |||| |||| |||| |||||||||    
T  26829512 cttattttagatgcttaaccattgccct 26829485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 463 - 616
Target Start/End: Original strand, 8001715 - 8001868
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||| ||| ||||| |||||  || ||||||||||||| |||||| ||||||||||| | |||||||||||| ||||||||| |||||| ||||||| ||    
T  8001715 gggttttgctaaccagtgccctcagggcaatggttaaggaatctagaaatagaaattttatcttgaaaatataagatgttacttttgataaagtaatgat 8001814  T
Q  563 tacacaactttttcattaaaacttacttgttttggatgattaagcattgccctt 616  Q
    |||||||||||| ||| |||| ||||||||||| |||| |||| ||||| ||||    
T  8001815 tacacaacttttacatgaaaatttacttgttttagatgcttaaccattggcctt 8001868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 490 - 618
Target Start/End: Original strand, 33148126 - 33148254
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| ||| ||||||| |||||| |||||| ||||||| ||||| ||| |||||||||||||| ||||||||| |||||||| ||||||||||    
T  33148126 caatggttaaggaatatacaaattgaaattttgtcttaaaaatataagatgctacttttgatcaagtaatgattacacaattttttcataaaaacttact 33148225  T
Q  590 tgttttggatgattaagcattgcccttga 618  Q
    ||||||| ||| ||||  | |||||||||    
T  33148226 tgttttgaatgtttaacaaatgcccttga 33148254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 497 - 595
Target Start/End: Original strand, 10226464 - 10226562
Alignment:
Q  497 taagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||  |||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  10226464 taaggaatctacaaatagaaattttgtcttgaaaatataagatgttaattttgataaagtaatgattacacaactttttcatgaaaacttacctgtttt 10226562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 595
Target Start/End: Complemental strand, 27688625 - 27688492
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    ||||||||||||||| ||| |  ||||| ||| |||||| |||||||||||  ||||| | | |||||||||| ||||||||| |||||| ||||||| |    
T  27688625 agggtcttgttaaccagtgtcatcaaggaaattgttaaggaatctacaaattaaaattttatattgaaaatataagatgttacttttgataaagtaatga 27688526  T
Q  562 ttacacaactttttcattaaaacttacttgtttt 595  Q
    |||||||| |||||||| ||||||||||||||||    
T  27688525 ttacacaagtttttcatgaaaacttacttgtttt 27688492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 491 - 618
Target Start/End: Original strand, 17169266 - 17169393
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||| ||||||||| |||||||| ||||  |||||||||||||| ||||||||  |||||| ||||||| |||| ||||||||||||| |||||||| ||    
T  17169266 aatgattaagaaatttacaaataaaaatattgtcttgaaaatataagatgttatttttgataaagtaattattatacaactttttcatgaaaacttattt 17169365  T
Q  591 gttttggatgattaagcattgcccttga 618  Q
    ||||| |||| |||| |||| |||||||    
T  17169366 gttttagatgcttaaccattacccttga 17169393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 465 - 595
Target Start/End: Complemental strand, 11449203 - 11449073
Alignment:
Q  465 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 564  Q
    |||||||||| | |||||| || || |||||||||  |||||||||||| ||| | |||||| ||||||| | ||||||  |||||||| ||||||||||    
T  11449203 gtcttgttaatcagtgccttcacggaaatggttaaagaatctacaaataaaaaatttgtcttaaaaatataatatgttaattttgatcatgtaataatta 11449104  T
Q  565 cacaactttttcattaaaacttacttgtttt 595  Q
    || ||||||||||| ||||||||||| ||||    
T  11449103 cataactttttcataaaaacttacttatttt 11449073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 575
Target Start/End: Original strand, 48282856 - 48282971
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    ||||||||||||||||||||||| ||  |||| |||||||| |||||| |||||||| ||||||||||||||||| |  ||| || ||| |||| |||||    
T  48282856 aaagggtcttgttaaccggtgcccccggggcactggttaaggaatctataaatagaatttctgtcttgaaaatataatctgtcactttttatcaggtaat 48282955  T
Q  560 aattacacaacttttt 575  Q
    |||||||  |||||||    
T  48282956 aattacattacttttt 48282971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 32187165 - 32187024
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| ||| || ||||||||||| |||||||||||||| ||||||||| ||||||||  |||||||| |||||| |||||| ||||| |||||||||||    
T  32187165 ttaaggaatttataaatagaaattttgtcttgaaaatataagatgttacttttgatcagataataattgcacaac-ttttcaataaaatttacttgtttt 32187067  T
Q  596 ggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    | ||  |||| || || |||||| |||| ||||| | ||||||    
T  32187066 gaattcttaaccaatgtccttgaggcaccggttatcattctcc 32187024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 631
Target Start/End: Original strand, 34347556 - 34347646
Alignment:
Q  541 ttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaac 631  Q
    |||| |||||| ||||||| |||||||||||||||||| || | |||||||||||||||| |||| |||||||||||  |||| |||||||    
T  34347556 ttacttttgataaagtaatgattacacaactttttcataaagatttacttgttttggatgcttaatcattgcccttggggcaccggttaac 34347646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 492 - 614
Target Start/End: Original strand, 30941466 - 30941588
Alignment:
Q  492 atggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttg 591  Q
    ||||||||| ||||| |||||| |  || ||||||| |||||| | ||||||  ||| |||||  ||||||||||||||||||||||  |||||||||||    
T  30941466 atggttaaggaatcttcaaatacattttttgtcttggaaatataacatgttattttttatcaaacaataattacacaactttttcatgtaaacttacttg 30941565  T
Q  592 ttttggatgattaagcattgccc 614  Q
    || |||||| |||| || |||||    
T  30941566 ttctggatgcttaaccaatgccc 30941588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 596
Target Start/End: Complemental strand, 52429748 - 52429639
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtctt-gaaaatatgagatgttacatttgatcaagtaataattacacaact-ttttcattaaaact 585  Q
    ||||||| |||| ||||||| |||| |||||| |||||| |||||| | |||||||||  |||||| |||||| ||||||||||| ||||||||||| ||    
T  52429748 ggcaatgattaaaaaatctataaattgaaattttgtcttagaaaat-taagatgttactcttgatctagtaatgattacacaacttttttcattaaagct 52429650  T
Q  586 tacttgttttg 596  Q
    |||||||||||    
T  52429649 tacttgttttg 52429639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 595
Target Start/End: Complemental strand, 40699368 - 40699263
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| |||||||||||| |  || ||||||| ||| || |||| |||| ||||||| |||||||||||||||| ||||| || |||||||  |    
T  40699368 caatggttaaggaatctacaaatacattttttgtcttggaaacataagattttacttttgatcgagtaataattacacaatttttttatgaaaacttgtt 40699269  T
Q  590 tgtttt 595  Q
    ||||||    
T  40699268 tgtttt 40699263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 595
Target Start/End: Original strand, 49731157 - 49731262
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| |||| | || ||||| || ||||||||| || | ||||||||||||||| ||| ||||||||| || |||||||  | ||||||||||    
T  49731157 caatggttaaggaatccaaaagtagaagttttgtcttgaagatgtaagatgttacatttgaccaaataataattatactactttttattaaaaacttact 49731256  T
Q  590 tgtttt 595  Q
    ||||||    
T  49731257 tgtttt 49731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 599
Target Start/End: Complemental strand, 38597560 - 38597489
Alignment:
Q  528 aaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggat 599  Q
    ||||||| |||| | || |||||| ||||||| |||| |||||||||| |||||||||||||||||||||||    
T  38597560 aaaatataagatatcacttttgattaagtaatgattagacaacttttttattaaaacttacttgttttggat 38597489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 595
Target Start/End: Complemental strand, 39238951 - 39238844
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||| |||| | ||||| ||||| | |||| ||||| | || ||||||||||||||||||||| ||||||| | |||||  | ||||||||    
T  39238951 ggcattggttaaggaatccataaataaaaattttctcttaaaaatgtaagttgttacatttgatcaagtaatgattacactattttttattaaaaactta 39238852  T
Q  588 cttgtttt 595  Q
    ||||||||    
T  39238851 cttgtttt 39238844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 649
Target Start/End: Complemental strand, 8279832 - 8279695
Alignment:
Q  512 tagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa-cttacttgttttggatgattaagcatt 610  Q
    ||||| || |||||||||||||| |||||||||||||||  || |||| |||| ||||| |||| ||||||| |||| ||||||| | ||||||| || |    
T  8279832 tagaagttttgtcttgaaaatataagatgttacatttgactaaataatgattatacaacgtttt-attaaaatcttaattgttttagttgattaaccaat 8279734  T
Q  611 gcccttgaagcactggttaaccttctccataaagaaatg 649  Q
    |||||||  ||||| |||| | |||||| |||| |||||    
T  8279733 gcccttggggcactagttagctttctccttaaaaaaatg 8279695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 540
Target Start/End: Complemental strand, 39993496 - 39993446
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatg 540  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  39993496 caatggttaagaaatctacaaataaaaattttgtcttgaaaatataagatg 39993446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 616
Target Start/End: Original strand, 50015771 - 50015896
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||| ||||| |||||  |||||| |||| |||||| |||||||  ||| |||| |||||||||| ||  |||| ||||||||||||| |||| ||| ||    
T  50015771 aatgattaaggaatctcaaaataggaattttgtcttaaaaatatatgatattacttttgatcaagcaacgattatacaactttttcataaaaatttattt 50015870  T
Q  591 gttttggatgattaagcattgccctt 616  Q
    |||||||||  |||| || |||||||    
T  50015871 gttttggatacttaaacaatgccctt 50015896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 605
Target Start/End: Complemental strand, 30109337 - 30109229
Alignment:
Q  498 aagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca-caactttttcattaaaacttacttgttttg 596  Q
    ||||||||| |||||||||||| ||| |||||||||| | ||||||  ||| |||||  ||| ||||||  |  ||||| ||||||||||||||||||||    
T  30109337 aagaaatctccaaatagaaattttgttttgaaaatataatatgttattttttatcaaacaatgattacatgattttttttattaaaacttacttgttttg 30109238  T
Q  597 gatgattaa 605  Q
    |||| ||||    
T  30109237 gatgtttaa 30109229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 614
Target Start/End: Original strand, 17644831 - 17644872
Alignment:
Q  573 tttcattaaaacttacttgttttggatgattaagcattgccc 614  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  17644831 tttcattaaaacttacttgttttggatgcttaaccattgccc 17644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 564
Target Start/End: Original strand, 11065840 - 11065936
Alignment:
Q  468 ttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatta 564  Q
    |||||||||||||||  |||||||||||||||| || ||| || || ||| | | |||||||||||| || | | || |||||| ||||||||||||    
T  11065840 ttgttaaccggtgccctcaaggcaatggttaaggaaactataattataaaatttctcttgaaaatataagttttgacttttgattaagtaataatta 11065936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 590
Target Start/End: Original strand, 40391218 - 40391313
Alignment:
Q  496 ttaagaaatctacaaatagaaatt-ctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||||| |||| ||| || ||||||||||||||| |  ||| || ||| |||||||||||||||||  ||||||| || |||||| ||||    
T  40391218 ttaagaaatctataaatcgaattttctgtcttgaaaatataaactgtcactttttatcaagtaataattacattactttttgataaaaactcactt 40391313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 575
Target Start/End: Complemental strand, 48580011 - 48579929
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaacttttt 575  Q
    ||||| || ||||||| |||||||||| ||||||  |||||| |||||| |  ||| ||||| |||| |||||||||||||||    
T  48580011 tggttgaggaatctactaatagaaattttgtcttagaaatataagatgtaatttttaatcaaataatgattacacaacttttt 48579929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 562
Target Start/End: Original strand, 15398275 - 15398316
Alignment:
Q  521 tgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||||||||||| | ||||||||||||||| |||||||||||    
T  15398275 tgtcttgaaaatgtaagatgttacatttgaccaagtaataat 15398316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 23998948 - 23998908
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactata 149  Q
    |||||| ||||||||||| ||||||||||||||||| ||||    
T  23998948 aaatatgtgcatttatattatgtatttactacaaaattata 23998908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 461 - 517
Target Start/End: Original strand, 27160276 - 27160332
Alignment:
Q  461 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaa 517  Q
    |||||| ||| |||||||||||  |||||||||||||||| |||||| || ||||||    
T  27160276 aagggttttgctaaccggtgccctcaaggcaatggttaagcaatctataattagaaa 27160332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 27580744 - 27580832
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 197  Q
    |||||| || |||||||| ||||||||| ||||||| ||||||||   |  ||| ||||||||||| |||||  |||| ||||||||||    
T  27580744 aaatatgtgtatttatattatgtatttattacaaaattatagtaatagacattgtcatttattttagaaaataaagaggatctcaactc 27580832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 523 - 567
Target Start/End: Complemental strand, 38169138 - 38169094
Alignment:
Q  523 tcttgaaaatatgagatgttacatttgatcaagtaataattacac 567  Q
    |||||||||||| || ||||||| ||||||||||||| |||||||    
T  38169138 tcttgaaaatataagttgttacacttgatcaagtaatgattacac 38169094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 597
Target Start/End: Original strand, 50127362 - 50127450
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 597  Q
    |||||||| |||||||||| |||||| |  ||| |  ||| ||| |||||||||||||  ||||||| || ||||||||||| ||||||    
T  50127362 aaatagaatttctgtcttggaaatataaactgtcattttttatcgagtaataattacattactttttaataaaaacttacttcttttgg 50127450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 611
Target Start/End: Complemental strand, 12095104 - 12094955
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    ||||||||| ||||| |||||  |  |||||| |||||| |||||||||||||||||| ||  |||||||||| |||| |||| |||||| ||||||| |    
T  12095104 agggtcttgctaaccagtgccctcggggcaatagttaaggaatctacaaatagaaattttgcattgaaaatataagatattacttttgataaagtaatga 12095005  T
Q  562 ttacacaactttttcattaaaacttacttgttttggatgattaagcattg 611  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |||||    
T  12095004 ttacacaactttttcataaaaacttacttattttggatgtttaaacattg 12094955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 640
Target Start/End: Complemental strand, 27284192 - 27284040
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||||||||| |||||||| ||||||||| ||||||| |||||| ||||||||| ||||||||| |||| ||| ||||||||||| || ||||||||    
T  27284192 ggcaatggttaaggaatctacatatagaaattttgtcttggaaatataagatgttacttttgatcaaataatgattgcacaacttttttataaaaactta 27284093  T
Q  588 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctccat 640  Q
     || ||||||||| |||| || ||||||||  | ||| |||||| ||||||||    
T  27284092 tttattttggatgtttaaccaatgcccttggggtactcgttaacattctccat 27284040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 493 - 615
Target Start/End: Original strand, 2824814 - 2824936
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||| | ||||||||||| | || |||||||  ||||| ||||||||| |||||||||||||| |||||||||| ||||||| ||||||| |||||    
T  2824814 tggttaaggattctacaaatagcacttttgtcttgggaatataagatgttacttttgatcaagtaatgattacacaacattttcataaaaacttgcttgt 2824913  T
Q  593 tttggatgattaagcattgccct 615  Q
    ||| |||| |||| || ||||||    
T  2824914 tttagatgcttaatcaatgccct 2824936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 485 - 639
Target Start/End: Original strand, 31991448 - 31991602
Alignment:
Q  485 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaac 584  Q
    |||||||||||||||| |||| |||| || ||||| ||  |||||||||| ||||||||  |||||| ||||||||||||||| | |||||||| ||||     
T  31991448 caaggcaatggttaaggaatccacaattaaaaattttgctttgaaaatataagatgttatttttgataaagtaataattacacgattttttcatgaaaat 31991547  T
Q  585 ttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcca 639  Q
    |||||| ||||  ||| |||| ||||||| ||||| || |||||| | |||||||    
T  31991548 ttacttattttatatgtttaaccattgcctttgaaacattggttagcgttctcca 31991602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 485 - 605
Target Start/End: Original strand, 12076418 - 12076538
Alignment:
Q  485 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaac 584  Q
    ||||| |||||||||| ||||| |||||| ||||| |||||||||||||| ||||||||  |||||||||| ||| || |||||| ||||| || | |||    
T  12076418 caaggtaatggttaaggaatcttcaaataaaaattttgtcttgaaaatataagatgttaattttgatcaagcaatgatcacacaattttttgatgagaac 12076517  T
Q  585 ttacttgttttggatgattaa 605  Q
    ||||||||||| |||| ||||    
T  12076518 ttacttgttttagatgtttaa 12076538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 488 - 640
Target Start/End: Complemental strand, 48419193 - 48419041
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||| |||||||||||||||||| ||| ||| |||| | | |  |||| |||||| ||||||| ||| |||||||||||||| ||||||||    
T  48419193 ggcagtggttaaggaatctacaaatagaaattttgttttggaaatgtaaaactttacttttgataaagtaatgattgcacaactttttcatgaaaactta 48419094  T
Q  588 cttgttttggatgattaagcattgcccttgaagcactggttaaccttctccat 640  Q
    ||||||||  ||| ||||  ||||||||| | ||||| |||| | ||||||||    
T  48419093 cttgttttatatgcttaactattgcccttaaggcactagttagcattctccat 48419041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 8019961 - 8020048
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaact 196  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| |||  ||||||||||||||| ||||| ||||| |||||||||    
T  8019961 aaatatgtgcatttatatcatgtatttacatcaaaactatagtaatgaacattgccatttattttagaaaattgagaggatctcaact 8020048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 488 - 610
Target Start/End: Complemental strand, 13967965 - 13967842
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat-taaaactt 586  Q
    |||||| |||||| |||||||||||||||||| |||||||  ||||| ||||||||  ||| |||||||||| |||| |||||||||||||  |||| ||    
T  13967965 ggcaatagttaaggaatctacaaatagaaattttgtcttggtaatataagatgttattttttatcaagtaatgattatacaactttttcataaaaaaatt 13967866  T
Q  587 acttgttttggatgattaagcatt 610  Q
    || ||||||||||| |||| ||||    
T  13967865 acatgttttggatgtttaaccatt 13967842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 616
Target Start/End: Complemental strand, 28740384 - 28740277
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 608  Q
    ||||| ||||| | |||||||||||| ||||| ||  |||||| ||||||| ||||| || |||||||||||||||||| ||||||| ||||||||| ||    
T  28740384 aaatataaattttatcttgaaaatataagatgatatttttgataaagtaatgattacgcatctttttcattaaaacttatttgttttagatgattaatca 28740285  T
Q  609 ttgccctt 616  Q
    ||||||||    
T  28740284 ttgccctt 28740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 486 - 643
Target Start/End: Complemental strand, 20775194 - 20775037
Alignment:
Q  486 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaact 585  Q
    |||| |||||||||  |||||| ||||| ||| | ||||||  |||||| |||| |||  ||||||||| |||| |||||| ||||||||||| ||||||    
T  20775194 aaggtaatggttaatgaatctataaataaaaaatttgtcttagaaatataagatattatttttgatcaaataattattacataactttttcataaaaact 20775095  T
Q  586 tacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccataaa 643  Q
    ||||||||||||||| |||| || || | ||| ||||||  ||| | |||||||||||    
T  20775094 tacttgttttggatgcttaaccaatgtctttggagcactatttagcattctccataaa 20775037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 589
Target Start/End: Original strand, 31089778 - 31089878
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    ||||||| ||||| ||||||| |||||||||| ||||| | |||||| | ||||||| |||||| ||||||| |||||||||||||||||| ||||||||    
T  31089778 ggcaatgattaaggaatctaccaatagaaattttgtctaggaaatataa-atgttacttttgataaagtaatgattacacaactttttcataaaaactta 31089876  T
Q  588 ct 589  Q
    ||    
T  31089877 ct 31089878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 595
Target Start/End: Complemental strand, 19480618 - 19480550
Alignment:
Q  527 gaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  19480618 gaaaatataagatgttacttttgataaagtaatgattacacaactttttcataaaaacttacttgtttt 19480550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 523 - 643
Target Start/End: Original strand, 39810731 - 39810850
Alignment:
Q  523 tcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagca 622  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||| ||||| || |||||||||||| |||| || | ||||||  |||    
T  39810731 tcttgaaaatataagatgttacttttgatcaagtaataattacacaa-tttatcatgaaaacatatttgttttggatgtttaaccaatacccttggggca 39810829  T
Q  623 ctggttaaccttctccataaa 643  Q
     | |||| | |||||||||||    
T  39810830 atagttagcattctccataaa 39810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 491 - 638
Target Start/End: Complemental strand, 28176892 - 28176746
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||||||||||||| |||||||||||||| | ||||  |||||| |||| |||  |||||| || |||| |||||||| |||||||||||||||||  ||    
T  28176892 aatggttaagaaatttacaaatagaaattttatcttagaaatataagatattat-tttgataaaataatgattacacatctttttcattaaaacttcatt 28176794  T
Q  591 gttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    ||||| |||| ||||  ||  ||||||  |||||||||||| ||||||    
T  28176793 gttttagatgcttaactatgacccttgtggcactggttaacattctcc 28176746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 506 - 594
Target Start/End: Complemental strand, 44190321 - 44190235
Alignment:
Q  506 tacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 594  Q
    |||||||| ||||| | |||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||   |||||||||||||||    
T  44190321 tacaaatataaattttatcttgaaaatataagatgttacttttgatcaagtaataattacataacttattc--gaaaacttacttgttt 44190235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 616
Target Start/End: Original strand, 52837233 - 52837388
Alignment:
Q  464 ggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttaca---tttgatcaagtaata 560  Q
    ||||||| ||| ||||| || || | ||||||||||| ||| || ||||||||||| | ||||| | |||| | |||||||    |||||||| |||||     
T  52837233 ggtcttgctaatcggtgtcttcaggacaatggttaaggaatttataaatagaaattttatcttggacatataaaatgttactacttttgatcacgtaatt 52837332  T
Q  561 attacacaactttttcattaaaacttacttgttttggatgattaagcattgccctt 616  Q
    |||||||||||||||||| |||| || ||||||||||||| |||| || |||||||    
T  52837333 attacacaactttttcataaaaattttcttgttttggatgcttaaccaatgccctt 52837388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 502 - 594
Target Start/End: Original strand, 2565418 - 2565510
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 594  Q
    |||||| ||||| ||||| | ||||||||| || | ||||||| |||||||||||||| ||||||||||||||  || |||||||||||||||    
T  2565418 aatctataaatataaattttatcttgaaaacataaaatgttacttttgatcaagtaatgattacacaacttttctataaaaacttacttgttt 2565510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 596
Target Start/End: Complemental strand, 22019718 - 22019615
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||| |||||| ||||  ||||| |||||| ||||||| ||||||||  ||  || ||||||| |||||||||||||||| | |||||||||||||    
T  22019718 tggttaaggaatctataaatgaaaattttgtctttaaaatataagatgttattttctattaagtaatgattacacaactttttcttgaaaacttacttgt 22019619  T
Q  593 tttg 596  Q
    ||||    
T  22019618 tttg 22019615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 595
Target Start/End: Original strand, 22611875 - 22611998
Alignment:
Q  473 aaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaa-ct 571  Q
    ||||||||||| || |  |||| |||||||||||||||||| ||||| |||||| ||||||| ||||||||| || ||| ||||||| ||||| |||  |    
T  22611875 aaccggtgccttcaggataatgattaagaaatctacaaatataaattttgtcttaaaaatataagatgttactttcgataaagtaatgattactcaattt 22611974  T
Q  572 ttttcattaaaacttacttgtttt 595  Q
    |||| ||| |||||||||| ||||    
T  22611975 tttttatttaaacttacttatttt 22611998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 472 - 586
Target Start/End: Original strand, 7437806 - 7437920
Alignment:
Q  472 taaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaact 571  Q
    |||| ||||||  |||||||||||||||  | || ||||||| ||| | ||||||| |||||| ||||||||| ||||| ||||| || |||||||||||    
T  7437806 taactggtgccctcaaggcaatggttaacgattccacaaataaaaaatgtgtcttggaaatataagatgttacttttgaacaagtcatgattacacaact 7437905  T
Q  572 ttttcattaaaactt 586  Q
    ||||| | |||||||    
T  7437906 ttttcgtaaaaactt 7437920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 605
Target Start/End: Complemental strand, 27133697 - 27133552
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    ||||||||||| ||||| || ||  || | ||||||||||| ||||  |||||||||| | ||||||  |||||| |||| |||  |||| |||||||||    
T  27133697 aaagggtcttgctaaccagtaccctcaggacaatggttaaggaatcaccaaatagaaagtttgtctttgaaatataagatattatttttgttcaagtaat 27133598  T
Q  560 aattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
     |||| ||||||||||||| ||||||||| | |||| |||| ||||    
T  27133597 gattatacaactttttcataaaaacttacctattttagatgcttaa 27133552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 493 - 597
Target Start/End: Original strand, 19147146 - 19147250
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    ||||||||||||||| || ||||| ||||||||||||||||| |  ||| || ||| ||||| |||||||||||  |||| || || ||||||||||| |    
T  19147146 tggttaagaaatctataagtagaatttctgtcttgaaaatataaactgtcactttttatcaaataataattacattacttattaataaaaacttacttct 19147245  T
Q  593 tttgg 597  Q
    |||||    
T  19147246 tttgg 19147250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 485 - 596
Target Start/End: Original strand, 51100016 - 51100128
Alignment:
Q  485 caaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat-taaaa 583  Q
    |||||||||||||||| |||||| ||||||||| | | | |||||||||| || | | || |||||| ||||||||||||||| ||||||| ||  ||||    
T  51100016 caaggcaatggttaaggaatctataaatagaaaatttattttgaaaatataagttttaacttttgattaagtaataattacactactttttaataaaaaa 51100115  T
Q  584 cttacttgttttg 596  Q
     ||||||||||||    
T  51100116 gttacttgttttg 51100128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 605
Target Start/End: Original strand, 16341097 - 16341212
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| ||| |||||||| || || ||||||  |||||| | ||||||| |||||| ||||||| |||||| || |||||||| |||| ||| |    
T  16341097 caatggttaaggaatttacaaataaaatttttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatt 16341196  T
Q  590 tgttttggatgattaa 605  Q
    | ||||||||| ||||    
T  16341197 tattttggatgtttaa 16341212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 614
Target Start/End: Original strand, 41142262 - 41142413
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||||||||||||| ||||| ||  |||| |||||||| |||  |  |||| ||||| ||||||||||| || || | |||| |||||| || |||||||    
T  41142262 gggtcttgttaaccagtgcccccggggcattggttaaggaattcatgaataaaaattttgtcttgaaaaaataaggtcttacttttgattaaataataat 41142361  T
Q  563 tacacaactttttcattaaaacttacttgttttggatgattaagcattgccc 614  Q
    ||||  |||||||  | |||| |||||||||||| ||| |||| ||||||||    
T  41142362 tacattacttttttgtgaaaatttacttgttttgaatgcttaaccattgccc 41142413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 491 - 574
Target Start/End: Original strand, 45921335 - 45921418
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttt 574  Q
    |||||||||| |||||| ||||||||| | |||||||||||||| || | | ||  ||||| ||||||||||||||||||||||    
T  45921335 aatggttaaggaatctataaatagaaaatttgtcttgaaaatataagttttgactattgattaagtaataattacacaactttt 45921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 572 - 641
Target Start/End: Original strand, 36506747 - 36506816
Alignment:
Q  572 ttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctccata 641  Q
    ||||||| |||| |||||||||||||||| ||||||| |||||||| |||| |||||| | |||||||||    
T  36506747 ttttcatgaaaatttacttgttttggatgcttaagcaatgcccttggagcattggttagcattctccata 36506816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 509 - 597
Target Start/End: Complemental strand, 30694382 - 30694297
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 597  Q
    ||||||||||| |||||||||||||| || ||||   ||||||||||||||||||| ||  || |||  | ||||||||||||||||||    
T  30694382 aaatagaaattttgtcttgaaaatataagttgtt---tttgatcaagtaataattatacctctgttttgtgaaaacttacttgttttgg 30694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 31861429 - 31861511
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcat 578  Q
    ||||| ||| |||| ||| ||||| | | ||| |||||| ||||||||| |||||||||||||| ||||||||| ||||||||    
T  31861429 ttaaggaatttacatataaaaattttattttggaaatataagatgttacttttgatcaagtaatgattacacaaatttttcat 31861511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 589
Target Start/End: Complemental strand, 44639951 - 44639887
Alignment:
Q  525 ttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    |||| ||||| ||||||||| |||||| ||||||| ||||||||||||||| || ||||| ||||    
T  44639951 ttgagaatataagatgttacttttgattaagtaatgattacacaactttttgatgaaaacatact 44639887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 589
Target Start/End: Original strand, 37431793 - 37431876
Alignment:
Q  506 tacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    |||||||| ||||| | |||| ||| ||| ||||||||| ||| || ||||||||||| ||||||||||  || ||||||||||    
T  37431793 tacaaataaaaattttatcttaaaattataagatgttacttttaattaagtaataattgcacaacttttcaataaaaacttact 37431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 595
Target Start/End: Complemental strand, 55090900 - 55090794
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||| || ||| ||||  ||| | |||||||||||||| || | | || |||||| |||| |||||||||||||||||| || |||| |||    
T  55090900 ggcattggttaaggaaactataaatgaaaaatttgtcttgaaaatataagttttgacttttgattaagttataattacacaacttttt-ataaaaagtta 55090802  T
Q  588 cttgtttt 595  Q
    ||||||||    
T  55090801 cttgtttt 55090794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 612
Target Start/End: Original strand, 55126785 - 55126896
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacattt-gatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 600  Q
    |||||||||||| |  || ||| |||||||||| | ||||||| ||| ||| || |||| |||||||||||||||||| |||||||| || |||| |||     
T  55126785 aatctacaaataaattttttgttttgaaaatataaaatgttactttttgataaaataatgattacacaactttttcataaaaacttatttattttagata 55126884  T
Q  601 attaagcattgc 612  Q
     |||| ||||||    
T  55126885 cttaaccattgc 55126896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 7593144 - 7593181
Alignment:
Q  116 tgcatttatatcatgtatttactacaaaactatagtaa 153  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  7593144 tgcatttatatcatatatttacttcaaaactatagtaa 7593181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 8019528 - 8019585
Alignment:
Q  117 gcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttatttta 174  Q
    ||||||| |||||||||||||  |||||||||||||| |||  |||||||||| ||||    
T  8019528 gcatttacatcatgtatttacatcaaaactatagtaatgaacattgccatttaattta 8019585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 534
Target Start/End: Original strand, 2908178 - 2908250
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatat 534  Q
    ||||||||  ||||||||| |  || ||||||||||||| || ||| ||||||||| | ||||||||||||||    
T  2908178 agggtcttactaaccggtgtcctcacggcaatggttaaggaaactataaatagaaaatttgtcttgaaaatat 2908250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 546 - 578
Target Start/End: Complemental strand, 3708754 - 3708722
Alignment:
Q  546 tttgatcaagtaataattacacaactttttcat 578  Q
    |||||||||||||| ||||||||||||||||||    
T  3708754 tttgatcaagtaatgattacacaactttttcat 3708722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 539 - 595
Target Start/End: Original strand, 36752696 - 36752752
Alignment:
Q  539 tgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    |||| ||||||| |||||||||||||||||| |||||  | |||| |||||||||||    
T  36752696 tgttccatttgaccaagtaataattacacaattttttattaaaaatttacttgtttt 36752752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 638
Target Start/End: Complemental strand, 22294131 - 22293954
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    ||||||||||| ||| | |||||||  || ||||||||||| |||||||||||||||||| ||||||| |||||| |||| ||   ||||||||| ||||    
T  22294131 aaagggtcttgctaaacagtgcctcagag-caatggttaaggaatctacaaatagaaattttgtcttggaaatataagatattggttttgatcaaataat 22294033  T
Q  560 aattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
     ||| |||||||||||||| ||||||||||||||||| ||| |||| || | ||||||  |||||||||| | ||||||    
T  22294032 tattgcacaactttttcataaaaacttacttgttttgaatgtttaaccaatacccttgtggcactggttagcattctcc 22293954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 490 - 616
Target Start/End: Complemental strand, 11816029 - 11815903
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||  |||||| ||||||||||| |||||||||||||| ||||||||| |||||| ||||||| ||||||||  |||||||| ||||||||||    
T  11816029 caatggttaatgaatctaaaaatagaaattttgtcttgaaaatataagatgttacttttgataaagtaatgattacacatatttttcataaaaacttact 11815930  T
Q  590 tgttttggatgattaagcattgccctt 616  Q
    ||||||  ||  |||| ||||||||||    
T  11815929 tgttttaaatatttaatcattgccctt 11815903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 618
Target Start/End: Complemental strand, 27544709 - 27544579
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||||||  |||| |||||||||||||||||| | |||||||||||| ||||||||  ||| |||| ||||| |||||||||||||||||| |||| |||    
T  27544709 ggcaatgactaaggaatctacaaatagaaattttatcttgaaaatataagatgttattttttatcatgtaatgattacacaactttttcatgaaaattta 27544610  T
Q  588 cttgttttggatgattaagcattgcccttga 618  Q
    ||||||||||||| ||||  | |||||||||    
T  27544609 cttgttttggatgtttaactaatgcccttga 27544579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 493 - 605
Target Start/End: Original strand, 30840596 - 30840707
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||| ||||||| || ||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||  | |||||||||||||    
T  30840596 tggttaaggaatctactaacagaaaatttgtcttgaaaatataagatgttacttttgatcaagtaatgattacacaacttttt-ttgaaaacttacttgt 30840694  T
Q  593 tttggatgattaa 605  Q
    |||||||| ||||    
T  30840695 tttggatgcttaa 30840707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 493 - 615
Target Start/End: Original strand, 30293821 - 30293943
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||  |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||| |||||| || |||||||| |||||||  ||||    
T  30293821 tggttaaagaatctacaaatagaaattttgtcttaaaaatataagatgttacttttgatcaagtaatgattacataattttttcatgaaaacttgtttgt 30293920  T
Q  593 tttggatgattaagcattgccct 615  Q
    |||| ||| |||| || ||||||    
T  30293921 tttgaatggttaaccagtgccct 30293943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 587
Target Start/End: Complemental strand, 36482168 - 36482072
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||||||||  |||||||||||||||||| ||| |||||||||| ||||||||| ||||||||| ||||  |||||||||||||| || ||||||||    
T  36482168 aatggttaatgaatctacaaatagaaattttgttttgaaaatataagatgttacttttgatcaaataatgtttacacaacttttttatgaaaactta 36482072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 597
Target Start/End: Complemental strand, 14863483 - 14863347
Alignment:
Q  461 aagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaata 560  Q
    |||||||||||||||| |||||| |  | || |||||||  |||||| ||||| || || |||||||||||||| |  ||| || ||| |||||||||||    
T  14863483 aagggtcttgttaaccagtgccttcgggacactggttaaagaatctataaatataatttatgtcttgaaaatataaactgtcactttttatcaagtaata 14863384  T
Q  561 attacacaactttttcattaaaacttacttgttttgg 597  Q
    ||||||  | ||||| || ||||||||||| ||||||    
T  14863383 attacattaatttttaataaaaacttactttttttgg 14863347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 587
Target Start/End: Original strand, 14044677 - 14044772
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||| |||||||||||| || || | |||||||| ||| |||| |||| |||||||||||||| ||||||||||||||| || ||||||||    
T  14044677 caattgttaaggaatctacaaata-aatttttttcttgaaa-tataagatattacttttgatcaagtaattattacacaacttttttataaaaactta 14044772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 18242552 - 18242479
Alignment:
Q  495 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacaca 568  Q
    |||||| ||||||||| |||||||| |||||||||||||| |||||  || ||||||| |||||| ||||||||    
T  18242552 gttaaggaatctacaagtagaaattttgtcttgaaaatataagatgcgacttttgatctagtaatgattacaca 18242479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 637
Target Start/End: Original strand, 8151765 - 8151940
Alignment:
Q  465 gtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaag--taataat 562  Q
    |||||||||||| ||||   || ||| ||||||||| ||| || || |||||||| ||| |||||||||| ||||||||| ||| ||||||  |||||||    
T  8151765 gtcttgttaaccagtgctctcagggccatggttaaggaatttataagtagaaattttgttttgaaaatataagatgttacttttaatcaagtataataat 8151864  T
Q  563 tacacaactttttcat-taaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctc 637  Q
    || | |||||||| ||  |||| |||||| ||||| ||  |||| || | ||||| | |||||||||||| |||||    
T  8151865 tatataacttttttatgaaaaatttacttattttgtatatttaatcaatacccttaaggcactggttaacattctc 8151940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 608
Target Start/End: Complemental strand, 41645147 - 41645034
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    |||||||  |||||| ||||| ||||| ||||| |||||||| |||| |||  ||| |||||||||| ||||||||||  |||||| |||| |||||| |    
T  41645147 tggttaaagaatctataaataaaaattttgtctagaaaatataagatattattttttatcaagtaatgattacacaac--tttcatgaaaatttacttat 41645050  T
Q  593 tttggatgattaagca 608  Q
    ||| |||| |||||||    
T  41645049 tttagatgcttaagca 41645034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 595
Target Start/End: Original strand, 1447548 - 1447654
Alignment:
Q  489 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcatt-aaaactta 587  Q
    |||||| |||||||||| | || |||||||| | | ||| |||||| || ||||||| |||| |||||||||||||||| || |||||||| ||||||||    
T  1447548 gcaatgattaagaaatccataagtagaaattttattttggaaatataagctgttacagttgaccaagtaataattacactac-ttttcattaaaaactta 1447646  T
Q  588 cttgtttt 595  Q
    ||| ||||    
T  1447647 cttatttt 1447654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 590
Target Start/End: Original strand, 2611141 - 2611244
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattc-tgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactt 586  Q
    |||| |||||||| |||||| |||||||||||  ||||||| |||||| || ||| || ||| || ||||||||||||||  ||||||| || |||||||    
T  2611141 ggcactggttaaggaatctataaatagaaatttatgtcttggaaatataagctgtcactttttattaagtaataattacattactttttaataaaaactt 2611240  T
Q  587 actt 590  Q
    ||||    
T  2611241 actt 2611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 488 - 566
Target Start/End: Complemental strand, 6102948 - 6102870
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattaca 566  Q
    ||||||||||||| |||||| ||||||||| | |||||| ||||||| || | | || |||||| ||||||||||||||    
T  6102948 ggcaatggttaaggaatctataaatagaaaatttgtcttcaaaatataagttttgacttttgattaagtaataattaca 6102870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 610
Target Start/End: Complemental strand, 6646367 - 6646286
Alignment:
Q  529 aaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcatt 610  Q
    |||||| | ||||||| |||||| | ||||| ||||||||| ||||||||||| | ||||||||||| |||| |||| ||||    
T  6646367 aaatataatatgttacttttgataatgtaatgattacacaattttttcattaatatttacttgttttagatgtttaaacatt 6646286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 638
Target Start/End: Original strand, 7609595 - 7609682
Alignment:
Q  550 atcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    |||||||||||||||||  ||||||| || ||||||||||| |||||| || |||| || |||||  | ||||||||||||| ||||||    
T  7609595 atcaagtaataattacattactttttaataaaaacttacttcttttgg-tgcttaaccaatgccccgggagcactggttaacattctcc 7609682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 638
Target Start/End: Complemental strand, 8435210 - 8435027
Alignment:
Q  455 taaagaaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaa 554  Q
    |||| ||||||||||||||||| ||||| ||   ||| || |||||||||||| || | ||||   ||||||| |||||| |  ||| || ||||| |||    
T  8435210 taaacaaagggtcttgttaacccgtgcccccggtgcactgattaagaaatctaaaagtggaaaaattgtcttggaaatataaagtgtaacttttgaccaa 8435111  T
Q  555 gtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
     ||||||||| || | ||||| || ||| ||||||| ||||||||| |||| || ||||   |  |||||||||||| ||||||    
T  8435110 ctaataattataccattttttaataaaatcttacttattttggatgcttaaccaatgcctcaggggcactggttaacattctcc 8435027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 599
Target Start/End: Complemental strand, 1056888 - 1056818
Alignment:
Q  529 aaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggat 599  Q
    |||||| | ||||||| ||| ||||| |||| |||||| || |||||||| |||||||| |||||||||||    
T  1056888 aaatataatatgttacttttaatcaaataatgattacataattttttcataaaaacttatttgttttggat 1056818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 566
Target Start/End: Original strand, 12036273 - 12036379
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    ||||||||||| ||||| || ||  || || ||| |||||| || ||| ||||||||| | |||||||||||||| || | | || |||||| |||||||    
T  12036273 aaagggtcttgctaaccagtaccctcagggaaatagttaaggaacctataaatagaaaatttgtcttgaaaatataagttttgacttttgattaagtaat 12036372  T
Q  560 aattaca 566  Q
    |||||||    
T  12036373 aattaca 12036379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 539
Target Start/End: Complemental strand, 34347001 - 34346951
Alignment:
Q  489 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagat 539  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||| ||||    
T  34347001 gcaatggttaaggaatctacaaataaaaaatttgtcttgaaaatataagat 34346951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 638
Target Start/End: Complemental strand, 7319316 - 7319228
Alignment:
Q  550 atcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    |||||||||| ||||||||||||||| ||  || ||||||  ||||||||| |||| || ||||| ||  |||||| ||||| ||||||    
T  7319316 atcaagtaattattacacaactttttaatagaatcttactctttttggatgcttaaccaatgcccatggggcactgtttaacattctcc 7319228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 119 - 147
Target Start/End: Complemental strand, 15069776 - 15069748
Alignment:
Q  119 atttatatcatgtatttactacaaaacta 147  Q
    |||||||||||||||||||||||||||||    
T  15069776 atttatatcatgtatttactacaaaacta 15069748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 509 - 617
Target Start/End: Original strand, 27365985 - 27366093
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagca 608  Q
    |||| |||||| | ||||| |||||| |||| |||| || || ||| |||| ||||| ||| |||||||| ||||| |  |||||||||||| |||| ||    
T  27365985 aaattgaaattttatcttggaaatataagatattactttagaccaaataatgattacgcaattttttcatgaaaacatgtttgttttggatgcttaacca 27366084  T
Q  609 ttgcccttg 617  Q
     ||||||||    
T  27366085 atgcccttg 27366093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 631
Target Start/End: Complemental strand, 120788 - 120646
Alignment:
Q  489 gcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttac 588  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| |||||| || |||| | ||||||  ||| |||||||||| ||  |||||||||    
T  120788 gcaatggttaaggaatctacaaatagaaattttgtcttgaaaatataagatgtcacttttggtaaagtaacgattgcacaacttttccacaaaaacttac 120689  T
Q  589 ttgttttggatgattaagcattgcccttgaagcactggttaac 631  Q
    || ||||||||| |||| ||||  ||||  | |||||||||||    
T  120688 ttattttggatgtttaaccattatccttagaacactggttaac 120646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 495 - 605
Target Start/End: Original strand, 5611129 - 5611239
Alignment:
Q  495 gttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttt 594  Q
    |||||| |||||| ||||||||||| ||||||  |||||| ||||||||| ||| ||||| ||||||||| ||||||| ||||| |||||||||||||||    
T  5611129 gttaaggaatctataaatagaaattttgtcttagaaatataagatgttacttttaatcaaataataattatacaacttattcataaaaacttacttgttt 5611228  T
Q  595 tggatgattaa 605  Q
    |||||| ||||    
T  5611229 tggatgtttaa 5611239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 616
Target Start/End: Complemental strand, 32134164 - 32134038
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    |||| |||||| |||||||||||||||||| ||| |||| ||||| ||||||||  ||| |||||||||| |||||||||||||||||  ||||||||||    
T  32134164 caatagttaaggaatctacaaatagaaattttgttttgagaatataagatgttattttttatcaagtaatgattacacaactttttcaagaaaacttact 32134065  T
Q  590 tgttttggatgattaagcattgccctt 616  Q
    | |||| |||| |||| || |||||||    
T  32134064 tattttagatgcttaaccaatgccctt 32134038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 488 - 638
Target Start/End: Complemental strand, 227455 - 227303
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgat-caagtaataattacacaa-ctttttcattaaaact 585  Q
    ||||||||||||| |||||| ||||||||||| | | |||||||||| ||||||||| ||||||  ||  ||| |||||||||  |||||||| ||| ||    
T  227455 ggcaatggttaaggaatctataaatagaaatttttttttgaaaatataagatgttacttttgataaaaacaatgattacacaatttttttcataaaatct 227356  T
Q  586 tacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    ||||| ||||||||| |||| |||| ||||||| |||||| ||||| ||||||    
T  227355 tacttcttttggatgcttaaccatttcccttgaggcactgattaacattctcc 227303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 605
Target Start/End: Original strand, 19659610 - 19659724
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||| ||| |||||||||| | ||||| ||| ||||||||||||||| ||| |||||||||| |||| ||||||||||||||| || ||||||||||    
T  19659610 caatggtcaaggaatctacaaaaataaattttgt-ttgaaaatatgagatattatatttgatcaactaatgattacacaacttttttataaaaacttact 19659708  T
Q  590 tgttttggatgattaa 605  Q
    | |||| |||| ||||    
T  19659709 tattttagatgtttaa 19659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 462 - 638
Target Start/End: Complemental strand, 31223330 - 31223165
Alignment:
Q  462 agggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataa 561  Q
    ||||||||| ||| ||||||| |||||||| |||||||  |||||||||||| ||||| ||||||| |||||| ||||             ||||||| |    
T  31223330 agggtcttgctaatcggtgccaccaaggcattggttaatgaatctacaaataaaaattttgtcttggaaatataagatt------------aagtaatga 31223243  T
Q  562 ttacacaacttttt-cattaaaacttacttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||| || |||||||| ||||| ||||| | ||||||    
T  31223242 ttacacaacttttttcatgaaaacttacttgttttggatgtttaaccaatgcccttggagcaccggttagcattctcc 31223165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 595
Target Start/End: Original strand, 33121279 - 33121411
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||| ||||||||| ||||||  || | |||||||||||||| | |||||| || || |||||||||||||| ||||||||  ||| |||||  ||| ||    
T  33121279 gggttttgttaaccagtgcctttaaagtaatggttaagaaattttcaaataaaatttttgtcttgaaaatataagatgttattttttatcaaacaatgat 33121378  T
Q  563 tacacaactttttcattaaaacttacttgtttt 595  Q
    |||||||||||||||| |||| |||||| ||||    
T  33121379 tacacaactttttcatgaaaatttacttatttt 33121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 486 - 595
Target Start/End: Original strand, 2911458 - 2911567
Alignment:
Q  486 aaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaact 585  Q
    ||||||||||||||  ||| || || ||||| || |||||||||||| | |||||||||||||||||||||||| |||| || |||||||  | ||||||    
T  2911458 aaggcaatggttaaagaatttaaaagtagaagttttgtcttgaaaatgtaagatgttacatttgatcaagtaatgattatactacttttttttaaaaact 2911557  T
Q  586 tacttgtttt 595  Q
    || |||||||    
T  2911558 tatttgtttt 2911567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 21917434 - 21917346
Alignment:
Q  109 aaatatatgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagagaatctcaactc 197  Q
    |||||| || ||||||||||||||||||||||||||||||||||| | |   ||| ||||||||||| |||||||||  ||||||||||    
T  21917434 aaatatgtgtatttatatcatgtatttactacaaaactatagtaatggaaactgcaatttattttaagaaatggagaatatctcaactc 21917346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 605
Target Start/End: Complemental strand, 2470499 - 2470354
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaat 559  Q
    ||||||||||| ||||| || ||  || | ||||||||||| ||||  |||||||||| | ||||||  |||||| |||| |||  |||| |||||||||    
T  2470499 aaagggtcttgctaaccagtaccctcaggacaatggttaaggaatcaccaaatagaaagtttgtctttgaaatataagatattatttttgttcaagtaat 2470400  T
Q  560 aattacacaactttttcattaaaacttacttgttttggatgattaa 605  Q
     |||| ||||||||||||| ||||||||| | |||| |||| ||||    
T  2470399 gattatacaactttttcataaaaacttacctattttagatgcttaa 2470354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 597
Target Start/End: Complemental strand, 10008304 - 10008204
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| |||||| ||| ||||||| |||||| ||||||| |   ||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  10008304 ttaaggaatctaaaaa-agaaattttgtcttaaaaatataaacggttacttttgatcaagtaataattacaccactttttaataaaaacttacttctttt 10008206  T
Q  596 gg 597  Q
    ||    
T  10008205 gg 10008204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 605
Target Start/End: Original strand, 17834969 - 17835086
Alignment:
Q  488 ggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaactta 587  Q
    |||| |||||||| | ||||||||||| |||  ||||||  |||||| |||| |||| |||||| |||||||||||| || | |||||||| |||||||     
T  17834969 ggcattggttaaggattctacaaatagcaatattgtctttgaaatataagatattacttttgattaagtaataattatacgattttttcatgaaaacttg 17835068  T
Q  588 cttgttttggatgattaa 605  Q
    ||||||||| ||| ||||    
T  17835069 cttgttttgaatgtttaa 17835086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 596
Target Start/End: Complemental strand, 18493328 - 18493255
Alignment:
Q  523 tcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttg 596  Q
    |||||||||||| | ||||||| |||||||||||||| |||||| |||||||| || |||||||||||| ||||    
T  18493328 tcttgaaaatataaaatgttacttttgatcaagtaattattacaaaacttttttataaaaacttacttgatttg 18493255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 595
Target Start/End: Original strand, 19320239 - 19320372
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||||||| ||||  |||||  ||||| |||| ||||| |||||||||||| |  || ||||||| |||||| | ||||||| |||||| ||||||  ||    
T  19320239 gggtcttgctaactagtgccctcaaggtaatgattaaggaatctacaaataaattttttgtcttgcaaatataaaatgttacttttgataaagtaacgat 19320338  T
Q  563 tacacaact-ttttcattaaaacttacttgtttt 595  Q
    ||||||||| |||| || ||||||||||||||||    
T  19320339 tacacaactctttttatgaaaacttacttgtttt 19320372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 536 - 610
Target Start/End: Original strand, 8636785 - 8636859
Alignment:
Q  536 agatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatgattaagcatt 610  Q
    ||||||||| |||||| ||||||| |||||| ||||||||||| ||||||||||| ||||| ||| |||| ||||    
T  8636785 agatgttacttttgataaagtaatgattacataactttttcatgaaaacttacttattttgtatgcttaatcatt 8636859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 17345843 - 17345952
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| |||| ||||||| ||||| ||| || ||||||| | ||||||| ||||||||||||   |||||| |||||||||| ||||| ||| |||||||    
T  17345843 ttaaggaatcaacaaataaaaattttgttttaaaaatataaaatgttacttttgatcaagtagcgattacataactttttcactaaaatttatttgtttt 17345942  T
Q  596 ggatgattaa 605  Q
    | ||| ||||    
T  17345943 gaatgcttaa 17345952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 638
Target Start/End: Complemental strand, 30929615 - 30929465
Alignment:
Q  490 caatggttaagaaatctacaaatagaaa-ttctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcatt--aaaactt 586  Q
    ||||||||||  |||||| || |||||| || || ||||||||| | ||||||||||||||||||| ||||||||| || ||||||| |||  |||| ||    
T  30929615 caatggttaaagaatctaaaagtagaaagttttgccttgaaaatttaagatgttacatttgatcaaataataattatactacttttt-attaaaaaattt 30929517  T
Q  587 acttgttttggatgattaagcattgcccttgaagcactggttaaccttctcc 638  Q
    ||||||||| |  | |||| || |||||||| |||||| |||| | ||||||    
T  30929516 acttgttttagtcgcttaaccaatgcccttggagcactagttagcattctcc 30929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 597
Target Start/End: Complemental strand, 27082373 - 27082322
Alignment:
Q  546 tttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 597  Q
    ||||||||| |||| |||||||||||||||||| |||| |||||||||||||    
T  27082373 tttgatcaaataatcattacacaactttttcatgaaaatttacttgttttgg 27082322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 493 - 595
Target Start/End: Complemental strand, 12677935 - 12677833
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgt 592  Q
    ||||||||||||| | || |||||||| | ||||  |||| ||||   |||||||||| |||||||| ||||||| |||||||  | |||||||||||||    
T  12677935 tggttaagaaatccataagtagaaattttctcttagaaatgtgagcgattacatttgaccaagtaatgattacactactttttattaaaaacttacttgt 12677836  T
Q  593 ttt 595  Q
    |||    
T  12677835 ttt 12677833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 568
Target Start/End: Original strand, 17453942 - 17454046
Alignment:
Q  464 ggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatt 563  Q
    ||||||| ||||| |||||| || |||| |||||||  | | || ||||  ||||| | | |||||||||| ||||||||| |||||||| |||||||||    
T  17453942 ggtcttgctaaccagtgccttcagggcattggttaacgattttataaatgaaaattttattttgaaaatataagatgttacttttgatcacgtaataatt 17454041  T
Q  564 acaca 568  Q
    |||||    
T  17454042 acaca 17454046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 563
Target Start/End: Original strand, 2613366 - 2613420
Alignment:
Q  509 aaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataatt 563  Q
    ||||||||||| |||||| ||||||| || || ||| ||||||||||||||||||    
T  2613366 aaatagaaattttgtcttaaaaatataagttgctacttttgatcaagtaataatt 2613420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 18239246 - 18239315
Alignment:
Q  116 tgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttattttaaaaaatggagag 186  Q
    ||||||||||| |||||||||| |||||| |||||||| | || ||| |||||||| || |||||||||||    
T  18239246 tgcatttatataatgtatttac-acaaaaatatagtaatggatattgtcatttattgtagaaaatggagag 18239315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 576
Target Start/End: Complemental strand, 2398125 - 2398040
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttc 576  Q
    |||| ||||| |||||| ||||||||| | | |||||||||||| || | | || |||||| ||||||||||||||  ||||||||    
T  2398125 aatgattaaggaatctataaatagaaaatttatcttgaaaatataagttttgacttttgattaagtaataattacatcactttttc 2398040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 463 - 575
Target Start/End: Complemental strand, 17506411 - 17506299
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    |||||||||||||| ||||  |  ||||| ||||||||||||||| ||||| || || | | ||| |||||| |  ||| || ||| |||||||||||||    
T  17506411 gggtcttgttaaccagtgctccggaggcactggttaagaaatctataaatataatttatattttggaaatataaactgtcactttttatcaagtaataat 17506312  T
Q  563 tacacaacttttt 575  Q
    ||||  |||||||    
T  17506311 tacattacttttt 17506299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 491 - 643
Target Start/End: Original strand, 15362 - 15514
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttactt 590  Q
    |||| ||||| ||| || |||||||| || |||||||||||||| ||||||||| ||||| |||||||  |||| |||  |||||||| |||||||||||    
T  15362 aatgattaaggaatttataaatagaatttttgtcttgaaaatataagatgttacttttgaccaagtaacgattatacacatttttcataaaaacttactt 15461  T
Q  591 gttttggatgattaagcattgcccttgaagcactggttaaccttctccataaa 643  Q
     ||||| ||| |||| || | ||| |||  ||||| ||||| |||||||||||    
T  15462 attttgaatgtttaaccaatacccctgagacactgattaacattctccataaa 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 596
Target Start/End: Original strand, 29988 - 30088
Alignment:
Q  496 ttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgtttt 595  Q
    ||||| |||||||||||||||| | | | |||||||||| ||||||||| ||| || || ||||||||||||||  ||||||| ||||||||||||||||    
T  29988 ttaaggaatctacaaatagaaactttattttgaaaatataagatgttacttttaattaaataataattacacaaacttttcataaaaacttacttgtttt 30087  T
Q  596 g 596  Q
    |    
T  30088 g 30088  T

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Target: scaffold0329 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 569
Target Start/End: Complemental strand, 7475 - 7398
Alignment:
Q  491 aatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaa 569  Q
    |||||||||||||| ||| |||||||||| |||||||||||||| |||| |||| ||||||||| |||| |||||||||    
T  7475 aatggttaagaaatttacgaatagaaatt-tgtcttgaaaatataagatattacttttgatcaaataatgattacacaa 7398  T

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Target: scaffold0079 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 605
Target Start/End: Complemental strand, 51764 - 51649
Alignment:
Q  490 caatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttact 589  Q
    ||||||||||| ||| |||||||| || || ||||||  |||||| | ||||||| |||||| ||||||| |||||| || |||||||| |||| ||| |    
T  51764 caatggttaaggaatttacaaataaaatttttgtctttgaaatataaaatgttacttttgattaagtaatgattacataattttttcataaaaatttatt 51665  T
Q  590 tgttttggatgattaa 605  Q
    | ||||||||| ||||    
T  51664 tattttggatgtttaa 51649  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 472 - 575
Target Start/End: Complemental strand, 36668 - 36565
Alignment:
Q  472 taaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaact 571  Q
    ||||||||||||  |||| |||| ||||  ||||| |||||| ||||| ||| |||||||||| ||||||||| |||||| || |||| |||| ||||||    
T  36668 taaccggtgcctttaaggtaatgattaaagaatcttcaaataaaaattttgttttgaaaatataagatgttacttttgattaaataatgattatacaact 36569  T
Q  572 tttt 575  Q
    ||||    
T  36568 tttt 36565  T

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Target: scaffold0283 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 3432 - 3350
Alignment:
Q  501 aaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaa 583  Q
    ||||||| ||||| ||||| |||||||||||||| | ||||||| |||||| ||||| | |||| ||||||||||||| ||||    
T  3432 aaatctataaataaaaattttgtcttgaaaatataaaatgttacttttgataaagtattgattatacaactttttcataaaaa 3350  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 587
Target Start/End: Complemental strand, 38946 - 38822
Alignment:
Q  463 gggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataat 562  Q
    ||||||||||||||||||||| |  || | ||||||| ||||||| |||||||| || | ||||| |||||| |  ||| |  ||| |||||||||||||    
T  38946 gggtcttgttaaccggtgccttcggggtactggttaaaaaatctataaatagaatttatatcttggaaatataaactgtcattttttatcaagtaataat 38847  T
Q  563 tacacaactttttcattaaaactta 587  Q
    ||||  ||||||| || ||||||||    
T  38846 tacattactttttaataaaaactta 38822  T

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Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 493 - 615
Target Start/End: Original strand, 18014 - 18137
Alignment:
Q  493 tggttaagaaatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaac-tttttcattaaaacttacttg 591  Q
    |||||||| || ||| ||||||||| | | |||| ||||||| || | | || |||||| |||||||||||||||||| ||||| || |||| |||||||    
T  18014 tggttaaggaaactataaatagaaaatttatcttaaaaatataagttttgacttttgattaagtaataattacacaactttttttataaaaagttacttg 18113  T
Q  592 ttttggatgattaagcattgccct 615  Q
    |||||| || |||| || ||||||    
T  18114 ttttggttgcttaaccaatgccct 18137  T

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Target: scaffold1372 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1372
Description:

Target: scaffold1372; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 534
Target Start/End: Original strand, 1237 - 1310
Alignment:
Q  460 aaagggtcttgttaaccggtgcctccaaggcaatggttaagaaatctacaaatagaaattctgtcttgaaaatat 534  Q
    ||||||||||||||||||||||| ||  ||||  ||||||| |||||| |||||||| |||||||||| ||||||    
T  1237 aaagggtcttgttaaccggtgcc-ccggggcacgggttaaggaatctataaatagaatttctgtcttggaaatat 1310  T

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Target: scaffold0957 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 600
Target Start/End: Original strand, 1921 - 2018
Alignment:
Q  502 aatctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttggatg 600  Q
    |||||||||||||||||| ||||||| |||| | ||||||||| | | |  ||||||| ||||  ||| |||||||| |||||||| || |||||||||    
T  1921 aatctacaaatagaaattttgtcttgtaaat-taagatgttacttatcacaaagtaatgattatccaattttttcataaaaacttatttcttttggatg 2018  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 16986 - 16928
Alignment:
Q  116 tgcatttatatcatgtatttactacaaaactatagtaacgaatgttgccatttatttta 174  Q
    ||||||||||| ||| ||||||||||||||||||  || |||  |||||||||||||||    
T  16986 tgcatttatatgatgcatttactacaaaactatacaaatgaacattgccatttatttta 16928  T

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Target: scaffold0117 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 597
Target Start/End: Original strand, 16838 - 16932
Alignment:
Q  503 atctacaaatagaaattctgtcttgaaaatatgagatgttacatttgatcaagtaataattacacaactttttcattaaaacttacttgttttgg 597  Q
    ||||| |||||||  ||||||||||||||||| |  ||| || ||| ||||||||||||||| | || ||||| || |||||||| || ||||||    
T  16838 atctataaatagagtttctgtcttgaaaatataaactgtcactttttatcaagtaataattatataattttttaataaaaacttatttcttttgg 16932  T

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