View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5529_low_1 (Length: 567)

Name: NF5529_low_1
Description: NF5529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5529_low_1
NF5529_low_1
[»] chr4 (19 HSPs)
chr4 (495-557)||(48900010-48900072)
chr4 (347-477)||(45364067-45364198)
chr4 (347-477)||(45375307-45375438)
chr4 (347-477)||(45382886-45383017)
chr4 (332-477)||(45346782-45346927)
chr4 (53-153)||(45346765-45346864)
chr4 (331-457)||(48842767-48842893)
chr4 (53-142)||(45342301-45342390)
chr4 (364-477)||(48872662-48872775)
chr4 (364-477)||(48877966-48878079)
chr4 (395-477)||(45342308-45342390)
chr4 (29-153)||(48872669-48872792)
chr4 (29-153)||(48877973-48878096)
chr4 (332-477)||(48865572-48865716)
chr4 (29-142)||(45364060-45364174)
chr4 (29-142)||(45375300-45375414)
chr4 (29-142)||(45382879-45382993)
chr4 (492-557)||(48856251-48856315)
chr4 (65-133)||(48865646-48865714)
[»] chr3 (5 HSPs)
chr3 (26-191)||(11023291-11023455)
chr3 (26-160)||(11014009-11014142)
chr3 (325-475)||(11014035-11014186)
chr3 (335-470)||(11023353-11023489)
chr3 (371-455)||(11004561-11004645)
[»] chr8 (2 HSPs)
chr8 (331-455)||(35648299-35648421)
chr8 (150-237)||(35647887-35647974)


Alignment Details
Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 495 - 557
Target Start/End: Original strand, 48900010 - 48900072
Alignment:
Q  495 ttgtataaatgataaaaattatactcctatgctcggcttcatgtatagcttgtttgatctgtg 557  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48900010 ttgtataaatgataaaaattatactcctatgctcggcttcatgtatagcttgtttgatctgtg 48900072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 45364198 - 45364067
Alignment:
Q  347 ctgtaattccaggggtattgttggagatataatatgaaaactgttcatgtgttttccaccta-aaacagctcaagccttttgaactaatgaatcacgaca 445  Q
    ||||| |||||||| | ||||| |||||||||||| |||||||||||| ||||||| ||||| ||  ||||||||| ||||||| | |||| ||| ||||    
T  45364198 ctgtagttccagggattttgttagagatataatataaaaactgttcatatgttttcaacctataagtagctcaagctttttgaattgatgattcaagaca 45364099  T
Q  446 aagttcatctgagttgggtttgcttggacagc 477  Q
    ||||||||||| |||| |||||||| ||||||    
T  45364098 aagttcatctgtgttgagtttgctttgacagc 45364067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 45375438 - 45375307
Alignment:
Q  347 ctgtaattccaggggtattgttggagatataatatgaaaactgttcatgtgttttccaccta-aaacagctcaagccttttgaactaatgaatcacgaca 445  Q
    ||||| |||||||| | ||||| |||||||||||| |||||||||||| ||||||| ||||| ||  ||||||||| ||||||| | |||| ||| ||||    
T  45375438 ctgtagttccagggattttgttagagatataatataaaaactgttcatatgttttcaacctataagtagctcaagctttttgaattgatgattcaagaca 45375339  T
Q  446 aagttcatctgagttgggtttgcttggacagc 477  Q
    ||||||||||| |||| |||||||| ||||||    
T  45375338 aagttcatctgtgttgagtttgctttgacagc 45375307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 45383017 - 45382886
Alignment:
Q  347 ctgtaattccaggggtattgttggagatataatatgaaaactgttcatgtgttttccaccta-aaacagctcaagccttttgaactaatgaatcacgaca 445  Q
    ||||| |||||||| | ||||| |||||||||||| |||||||||||| ||||||| ||||| ||  ||||||||| ||||||| | |||| ||| ||||    
T  45383017 ctgtagttccagggattttgttagagatataatataaaaactgttcatatgttttcaacctataagtagctcaagctttttgaattgatgattcaagaca 45382918  T
Q  446 aagttcatctgagttgggtttgcttggacagc 477  Q
    ||||||||||| |||| |||||||| ||||||    
T  45382917 aagttcatctgtgttgagtttgctttgacagc 45382886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 332 - 477
Target Start/End: Complemental strand, 45346927 - 45346782
Alignment:
Q  332 tccattcttcaagggctgtaattccaggggtattgttggagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaact 431  Q
    |||||||||||| || |||| |||||||| | ||  | |||||||||||| |||||  || | |||||||||||||| || ||||||||| ||||||| |    
T  45346927 tccattcttcaatggttgtagttccagggatttttgttgagatataatataaaaaccatttacgtgttttccacctacaatagctcaagctttttgaatt 45346828  T
Q  432 aatgaatcacgacaaagttcatctgagttgggtttgcttggacagc 477  Q
     |||| ||||||||||| ||||||||| || ||| |||||||||||    
T  45346827 gatgattcacgacaaagctcatctgagctgagttcgcttggacagc 45346782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 45346864 - 45346765
Alignment:
Q  53 gtgtttcccacctaaaatggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttacttggacatctaaaaaacatagacaat 152  Q
    |||||| ||||||| ||| ||||| || |||| ||||||||||| ||||||||| ||||||||||||||||  |||||||| |||||||| |||||||||    
T  45346864 gtgttttccacctacaatagctcaagctttttgaattgatgattcacgacaaagctcatctgagctgagttcgcttggacagctaaaaaa-atagacaat 45346766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 457
Target Start/End: Complemental strand, 48842893 - 48842767
Alignment:
Q  331 gtccattcttcaagggctgtaattccaggggtattgttggagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaac 430  Q
    |||||| ||||||||| |||  |||||||||| | ||| |||||||||||| |||||||||||||||||||||  |||||| |||| ||   ||||| |     
T  48842893 gtccatccttcaagggatgttgttccaggggtttagttagagatataatataaaaactgttcatgtgttttccgtctaaaatagcttaacttttttggat 48842794  T
Q  431 taatgaatcacgacaaagttcatctga 457  Q
    | |||| |||| |||||||||||||||    
T  48842793 tgatgattcacaacaaagttcatctga 48842767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 45342390 - 45342301
Alignment:
Q  53 gtgtttcccacctaaaatggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttacttggacatctaaaaaa 142  Q
    |||||| ||||||| ||| ||||| || |||| ||||||||||| ||||||||| ||||||||||||||||  |||||||| ||||||||    
T  45342390 gtgttttccacctacaatagctcaagctttttgaattgatgattcacgacaaagctcatctgagctgagttcgcttggacagctaaaaaa 45342301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 364 - 477
Target Start/End: Original strand, 48872662 - 48872775
Alignment:
Q  364 ttgttggagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaactaatgaatcacgacaaagttcatctgagttggg 463  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||| | ||||| | |||||||   |||| ||||||| |||||||| |||| ||      
T  48872662 ttgttagagatataatataaaaacttttcatgtgttttccacctaaaataactcaacctttttgaatcgatgattcacgaccaagttcatttgagctgat 48872761  T
Q  464 tttgcttggacagc 477  Q
    ||||||| ||||||    
T  48872762 tttgctttgacagc 48872775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 364 - 477
Target Start/End: Original strand, 48877966 - 48878079
Alignment:
Q  364 ttgttggagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaactaatgaatcacgacaaagttcatctgagttggg 463  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||| | ||||| | |||||||   |||| ||||||| |||||||| |||| ||      
T  48877966 ttgttagagatataatataaaaacttttcatgtgttttccacctaaaataactcaacctttttgaatcgatgattcacgaccaagttcatttgagctgat 48878065  T
Q  464 tttgcttggacagc 477  Q
    ||||||| ||||||    
T  48878066 tttgctttgacagc 48878079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 477
Target Start/End: Complemental strand, 45342390 - 45342308
Alignment:
Q  395 gtgttttccacctaaaacagctcaagccttttgaactaatgaatcacgacaaagttcatctgagttgggtttgcttggacagc 477  Q
    |||||||||||||| || ||||||||| ||||||| | |||| ||||||||||| ||||||||| || ||| |||||||||||    
T  45342390 gtgttttccacctacaatagctcaagctttttgaattgatgattcacgacaaagctcatctgagctgagttcgcttggacagc 45342308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 48872669 - 48872792
Alignment:
Q  29 agatataatatacaaattgttaatgtgtttcccacctaaaatggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttactt 128  Q
    |||||||||||| ||| | || |||||||| |||||||||||  ||||  | |||| ||| ||||||| ||||| |||||||| |||||||| ||| |||    
T  48872669 agatataatataaaaacttttcatgtgttttccacctaaaataactcaacctttttgaatcgatgattcacgaccaagttcatttgagctgattttgctt 48872768  T
Q  129 ggacatctaaaaaacatagacaatt 153  Q
     |||| ||||||||| |||||||||    
T  48872769 tgacagctaaaaaac-tagacaatt 48872792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 48877973 - 48878096
Alignment:
Q  29 agatataatatacaaattgttaatgtgtttcccacctaaaatggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttactt 128  Q
    |||||||||||| ||| | || |||||||| |||||||||||  ||||  | |||| ||| ||||||| ||||| |||||||| |||||||| ||| |||    
T  48877973 agatataatataaaaacttttcatgtgttttccacctaaaataactcaacctttttgaatcgatgattcacgaccaagttcatttgagctgattttgctt 48878072  T
Q  129 ggacatctaaaaaacatagacaatt 153  Q
     |||| ||||||||| |||||||||    
T  48878073 tgacagctaaaaaac-tagacaatt 48878096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 477
Target Start/End: Original strand, 48865572 - 48865716
Alignment:
Q  332 tccattcttcaagggctgtaattccaggggtattgttg-gagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaac 430  Q
    |||||||||||||||||||  | |  ||||| |||||  ||| |||||||| |||||||||  |||||||||  | ||||| ||||||||| |||||||     
T  48865572 tccattcttcaagggctgtggtacttggggttttgttaagaggtataatataaaaactgtt--tgtgttttcaccttaaaatagctcaagctttttgaat 48865669  T
Q  431 taatgaatcacgacaaagttcatctgagttgggtttgcttggacagc 477  Q
      || | |||||||||||||||||| || || ||||| |||||||||    
T  48865670 ggatcattcacgacaaagttcatctaagctgagtttgtttggacagc 48865716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 45364174 - 45364060
Alignment:
Q  29 agatataatatacaaattgttaatgtgtttcccacctaaaa-tggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttact 127  Q
    |||||||||||| ||| |||| || ||||| | ||||| || | ||||| || |||| ||||||||||| | ||||||||||||||| | ||||||| ||    
T  45364174 agatataatataaaaactgttcatatgttttcaacctataagtagctcaagctttttgaattgatgattcaagacaaagttcatctgtgttgagtttgct 45364075  T
Q  128 tggacatctaaaaaa 142  Q
    | |||| ||||||||    
T  45364074 ttgacagctaaaaaa 45364060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 45375414 - 45375300
Alignment:
Q  29 agatataatatacaaattgttaatgtgtttcccacctaaaa-tggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttact 127  Q
    |||||||||||| ||| |||| || ||||| | ||||| || | ||||| || |||| ||||||||||| | ||||||||||||||| | ||||||| ||    
T  45375414 agatataatataaaaactgttcatatgttttcaacctataagtagctcaagctttttgaattgatgattcaagacaaagttcatctgtgttgagtttgct 45375315  T
Q  128 tggacatctaaaaaa 142  Q
    | |||| ||||||||    
T  45375314 ttgacagctaaaaaa 45375300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 45382993 - 45382879
Alignment:
Q  29 agatataatatacaaattgttaatgtgtttcccacctaaaa-tggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttact 127  Q
    |||||||||||| ||| |||| || ||||| | ||||| || | ||||| || |||| ||||||||||| | ||||||||||||||| | ||||||| ||    
T  45382993 agatataatataaaaactgttcatatgttttcaacctataagtagctcaagctttttgaattgatgattcaagacaaagttcatctgtgttgagtttgct 45382894  T
Q  128 tggacatctaaaaaa 142  Q
    | |||| ||||||||    
T  45382893 ttgacagctaaaaaa 45382879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 557
Target Start/End: Original strand, 48856251 - 48856315
Alignment:
Q  492 tttttgtataaatgataaaaattatactcctatgctcggcttcatgtatagcttgtttgatctgtg 557  Q
    ||||||||||||||| |||| ||||| ||||||||| |||||  | ||||||||||||||| ||||    
T  48856251 tttttgtataaatgagaaaa-ttatattcctatgcttggctttgtatatagcttgtttgatttgtg 48856315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 48865646 - 48865714
Alignment:
Q  65 taaaatggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagtttacttggaca 133  Q
    |||||| ||||| || |||| ||| ||| ||| |||||||||||||||| ||||||||||  |||||||    
T  48865646 taaaatagctcaagctttttgaatggatcattcacgacaaagttcatctaagctgagtttgtttggaca 48865714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 11023455 - 11023291
Alignment:
Q  26 taaagatataatatacaaattgttaatgtgtttcccacctaaaatggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagttta 125  Q
    ||||||||| ||||| ||| | || ||||  || ||||||||||| ||| | || |||  ||||||||||| || ||||||||||||||||||||||||     
T  11023455 taaagatatgatataaaaactattcatgtactttccacctaaaatagctaaagcttttggaattgatgattcacaacaaagttcatctgagctgagtttg 11023356  T
Q  126 cttggacatctaaaaaacatagacaattcaactaaggaaggtgaacttgagagtgtgggaaattga 191  Q
    |||  |||||||||||| ||  |||||||||| || |  |||||||||||||||||||||||||||    
T  11023355 ctttaacatctaaaaaa-attcacaattcaaccaaaggtggtgaacttgagagtgtgggaaattga 11023291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 11014142 - 11014009
Alignment:
Q  26 taaagatataatatacaaattgttaatgtgtttcccacctaaaatggctcatgcctttttaattgatgatttacgacaaagttcatctgagctgagttta 125  Q
    ||||||||| ||||| ||| | || |||| ||| ||||||||||| ||| | || |||| |||||||||||    ||||||||||||||||||||||||     
T  11014142 taaagatatgatataaaaactattcatgtattttccacctaaaatagcttaagctttttgaattgatgattcctaacaaagttcatctgagctgagtttg 11014043  T
Q  126 cttggacatctaaaaaacatagacaattcaactaa 160  Q
    ||||||||||||||||| ||| |||||||||||||    
T  11014042 cttggacatctaaaaaa-atacacaattcaactaa 11014009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 475
Target Start/End: Complemental strand, 11014186 - 11014035
Alignment:
Q  325 tgtatcgtccattcttcaagggctgtaattcca-ggggtattgttggagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagcct 423  Q
    ||||| |||||||||||||| |||||| || || |||||  ||||  |||||| |||| |||||| ||||||| |||||||||||||| |||| |||| |    
T  11014186 tgtatagtccattcttcaagagctgtagtttcaaggggttatgttaaagatatgatataaaaactattcatgtattttccacctaaaatagcttaagctt 11014087  T
Q  424 tttgaactaatgaatcacgacaaagttcatctgagttgggtttgcttggaca 475  Q
    |||||| | |||| ||   |||||||||||||||| || |||||||||||||    
T  11014086 tttgaattgatgattcctaacaaagttcatctgagctgagtttgcttggaca 11014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 470
Target Start/End: Complemental strand, 11023489 - 11023353
Alignment:
Q  335 attcttcaagggctgtaattccaggggtat-tgttggagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaactaa 433  Q
    |||||||||| |||||| || ||||||  | ||||  |||||| |||| |||||| |||||||  ||||||||||||| |||| |||| ||| ||| | |    
T  11023489 attcttcaagagctgtagtttcagggggttatgttaaagatatgatataaaaactattcatgtactttccacctaaaatagctaaagcttttggaattga 11023390  T
Q  434 tgaatcacgacaaagttcatctgagttgggtttgctt 470  Q
    ||| |||| |||||||||||||||| || ||||||||    
T  11023389 tgattcacaacaaagttcatctgagctgagtttgctt 11023353  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 455
Target Start/End: Complemental strand, 11004645 - 11004561
Alignment:
Q  371 agatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaactaatgaatcacgacaaagttcatct 455  Q
    |||||| |||| |||||| ||||||| |||||||||||||| |||| |||| ||||||| | |||| |||| ||| |||||||||    
T  11004645 agatatgatataaaaactattcatgtattttccacctaaaaaagctaaagctttttgaattgatgattcacaacatagttcatct 11004561  T

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Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 331 - 455
Target Start/End: Complemental strand, 35648421 - 35648299
Alignment:
Q  331 gtccattcttcaagggctgtaattccaggggtattgttggagatataatatgaaaactgttcatgtgttttccacctaaaacagctcaagccttttgaac 430  Q
    |||||||||||||||| |||  |||||||||| | ||| |||||||||||| ||||| ||||||| |||||||| |||||||| |  ||  ||||||||     
T  35648421 gtccattcttcaagggatgttgttccaggggtttagttagagatataatataaaaaccgttcatgagttttccatctaaaacatcctaa--cttttgaat 35648324  T
Q  431 taatgaatcacgacaaagttcatct 455  Q
    | ||||  |||||||||||||||||    
T  35648323 tgatgatacacgacaaagttcatct 35648299  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 35647974 - 35647887
Alignment:
Q  150 aattcaactaaggaaggtgaacttgagagtgtgggaaattgaccgaagaagaggacattaatcaattcgtattttgttactaacttgt 237  Q
    |||||||| || |||||||||||| ||||||||||||||||||| |||||  |||| | | ||||||| |||||||| ||||| ||||    
T  35647974 aattcaaccaaagaaggtgaacttaagagtgtgggaaattgaccaaagaaagggacgtcagtcaattcctattttgtgactaagttgt 35647887  T

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