View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5537-Insertion-1 (Length: 1018)

Name: NF5537-Insertion-1
Description: NF5537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5537-Insertion-1
NF5537-Insertion-1
[»] chr8 (47 HSPs)
chr8 (424-892)||(7948473-7948943)
chr8 (21-426)||(7948027-7948430)
chr8 (7-121)||(7942215-7942328)
chr8 (936-1002)||(7948997-7949066)
chr8 (371-428)||(8717479-8717536)
chr8 (371-416)||(6447189-6447234)
chr8 (197-266)||(7942404-7942471)
chr8 (369-426)||(13105092-13105149)
chr8 (371-416)||(19701360-19701405)
chr8 (371-416)||(37999436-37999481)
chr8 (370-426)||(27077109-27077165)
chr8 (697-753)||(39691151-39691207)
chr8 (371-426)||(133418-133473)
chr8 (371-426)||(2294111-2294166)
chr8 (371-426)||(2792782-2792837)
chr8 (377-428)||(7388464-7388515)
chr8 (371-426)||(8034424-8034479)
chr8 (371-426)||(10083166-10083221)
chr8 (371-426)||(10573104-10573159)
chr8 (371-426)||(14279577-14279632)
chr8 (371-426)||(29734017-29734072)
chr8 (371-426)||(33617975-33618030)
chr8 (371-426)||(36540290-36540345)
chr8 (371-426)||(37090625-37090680)
chr8 (377-428)||(37141363-37141414)
chr8 (698-753)||(37564369-37564424)
chr8 (371-414)||(37938495-37938538)
chr8 (371-426)||(40094888-40094943)
chr8 (373-428)||(44643036-44643091)
chr8 (372-426)||(14582452-14582505)
chr8 (369-415)||(24696023-24696069)
chr8 (362-428)||(32051536-32051602)
chr8 (371-416)||(1877678-1877723)
chr8 (698-755)||(2335784-2335840)
chr8 (371-416)||(7553679-7553724)
chr8 (371-428)||(10982726-10982783)
chr8 (371-428)||(12714374-12714431)
chr8 (371-416)||(13357457-13357502)
chr8 (371-424)||(22487878-22487931)
chr8 (698-747)||(25163065-25163114)
chr8 (371-416)||(27718910-27718955)
chr8 (371-428)||(29621262-29621319)
chr8 (371-428)||(32115410-32115467)
chr8 (371-416)||(33451365-33451410)
chr8 (371-428)||(35939490-35939547)
chr8 (371-428)||(38402254-38402311)
chr8 (373-414)||(42575980-42576021)
[»] chr1 (47 HSPs)
chr1 (370-416)||(49868010-49868056)
chr1 (698-753)||(1600963-1601018)
chr1 (371-428)||(44641527-44641584)
chr1 (370-426)||(1247257-1247313)
chr1 (371-426)||(621580-621635)
chr1 (698-753)||(5423783-5423838)
chr1 (371-426)||(44732636-44732691)
chr1 (381-415)||(782181-782215)
chr1 (370-428)||(34521194-34521252)
chr1 (371-425)||(42127630-42127684)
chr1 (371-428)||(3777718-3777775)
chr1 (371-416)||(19396207-19396252)
chr1 (370-415)||(24631838-24631883)
chr1 (371-416)||(31759909-31759954)
chr1 (371-428)||(52043273-52043330)
chr1 (371-411)||(9116893-9116933)
chr1 (361-425)||(10292926-10292990)
chr1 (364-428)||(17917142-17917206)
chr1 (370-414)||(29935982-29936026)
chr1 (370-421)||(3393579-3393630)
chr1 (371-426)||(9866196-9866251)
chr1 (371-426)||(35605635-35605690)
chr1 (371-422)||(40051464-40051515)
chr1 (371-426)||(42490422-42490477)
chr1 (371-422)||(44019279-44019330)
chr1 (371-426)||(47719113-47719168)
chr1 (706-748)||(4521050-4521092)
chr1 (370-428)||(17669644-17669702)
chr1 (371-425)||(18551646-18551700)
chr1 (382-416)||(25498778-25498812)
chr1 (370-428)||(51067898-51067956)
chr1 (371-428)||(1091179-1091236)
chr1 (373-410)||(6844259-6844296)
chr1 (370-411)||(7160894-7160935)
chr1 (371-428)||(8415732-8415789)
chr1 (371-428)||(11065123-11065180)
chr1 (371-416)||(13794524-13794569)
chr1 (371-428)||(16967198-16967255)
chr1 (371-428)||(26755616-26755673)
chr1 (698-755)||(26857226-26857283)
chr1 (371-424)||(37662571-37662624)
chr1 (371-416)||(41974761-41974806)
chr1 (384-425)||(42366879-42366920)
chr1 (381-426)||(42416813-42416858)
chr1 (704-753)||(44442270-44442319)
chr1 (371-428)||(46225390-46225447)
chr1 (371-428)||(47478858-47478915)
[»] chr6 (29 HSPs)
chr6 (364-428)||(24623321-24623385)
chr6 (698-755)||(387471-387528)
chr6 (371-428)||(8569709-8569766)
chr6 (371-428)||(8629700-8629757)
chr6 (377-426)||(32388235-32388284)
chr6 (371-415)||(3373398-3373442)
chr6 (371-426)||(978146-978201)
chr6 (371-426)||(3294767-3294822)
chr6 (371-426)||(3640517-3640572)
chr6 (371-426)||(9372213-9372268)
chr6 (371-426)||(10517202-10517257)
chr6 (381-428)||(16966404-16966451)
chr6 (371-426)||(20568297-20568352)
chr6 (371-426)||(31705902-31705957)
chr6 (371-426)||(33697125-33697180)
chr6 (369-415)||(2692213-2692259)
chr6 (371-416)||(1918474-1918519)
chr6 (377-426)||(2726423-2726472)
chr6 (371-428)||(7328657-7328714)
chr6 (371-428)||(8834930-8834987)
chr6 (371-428)||(10018400-10018456)
chr6 (374-411)||(10999153-10999190)
chr6 (371-428)||(12904321-12904378)
chr6 (371-416)||(13496116-13496161)
chr6 (371-416)||(13732815-13732860)
chr6 (385-426)||(16913912-16913953)
chr6 (371-428)||(23610329-23610386)
chr6 (371-428)||(32053788-32053845)
chr6 (377-426)||(32620083-32620132)
[»] chr2 (45 HSPs)
chr2 (372-428)||(5168583-5168639)
chr2 (371-428)||(25186246-25186303)
chr2 (370-419)||(37119271-37119320)
chr2 (377-428)||(9547413-9547464)
chr2 (371-426)||(32609199-32609254)
chr2 (377-428)||(44694694-44694745)
chr2 (370-416)||(29734690-29734736)
chr2 (371-416)||(6723093-6723138)
chr2 (362-415)||(18324911-18324964)
chr2 (371-415)||(10195679-10195723)
chr2 (369-413)||(37352518-37352562)
chr2 (369-413)||(42039209-42039253)
chr2 (371-426)||(7379612-7379667)
chr2 (705-748)||(8964413-8964456)
chr2 (377-428)||(19159947-19159998)
chr2 (371-426)||(23405199-23405254)
chr2 (371-426)||(27411092-27411147)
chr2 (371-414)||(33041887-33041930)
chr2 (371-426)||(39408702-39408757)
chr2 (371-426)||(40363083-40363138)
chr2 (698-753)||(44195521-44195576)
chr2 (371-426)||(44666355-44666410)
chr2 (366-416)||(6141215-6141265)
chr2 (698-752)||(14663218-14663272)
chr2 (370-416)||(16204833-16204879)
chr2 (370-428)||(20120725-20120783)
chr2 (370-416)||(27152352-27152398)
chr2 (378-428)||(34376893-34376943)
chr2 (370-428)||(35281215-35281273)
chr2 (370-428)||(36264483-36264541)
chr2 (370-416)||(41859851-41859897)
chr2 (371-413)||(43146355-43146397)
chr2 (371-416)||(2256971-2257016)
chr2 (371-428)||(5676739-5676796)
chr2 (371-416)||(9389468-9389513)
chr2 (377-426)||(13196706-13196755)
chr2 (374-411)||(18559240-18559277)
chr2 (371-416)||(20239343-20239388)
chr2 (365-426)||(23919489-23919550)
chr2 (371-428)||(31543012-31543069)
chr2 (371-428)||(31815891-31815948)
chr2 (371-416)||(33063986-33064031)
chr2 (371-416)||(34977204-34977249)
chr2 (371-416)||(39761438-39761483)
chr2 (371-416)||(40967387-40967432)
[»] chr7 (34 HSPs)
chr7 (371-426)||(3392470-3392525)
chr7 (371-425)||(27679023-27679077)
chr7 (371-428)||(19599145-19599202)
chr7 (371-428)||(34000262-34000319)
chr7 (371-428)||(48674572-48674629)
chr7 (371-426)||(9712210-9712265)
chr7 (372-426)||(15716697-15716751)
chr7 (374-428)||(46916412-46916466)
chr7 (371-416)||(429194-429239)
chr7 (371-416)||(5317304-5317349)
chr7 (371-416)||(30872025-30872070)
chr7 (369-426)||(45425451-45425508)
chr7 (364-416)||(6384844-6384896)
chr7 (371-426)||(15106703-15106758)
chr7 (371-426)||(30806118-30806173)
chr7 (371-426)||(32315223-32315278)
chr7 (377-428)||(32855526-32855577)
chr7 (363-426)||(38151339-38151402)
chr7 (371-426)||(41084042-41084097)
chr7 (371-426)||(42182210-42182265)
chr7 (372-418)||(12615755-12615801)
chr7 (370-416)||(22991407-22991453)
chr7 (371-421)||(29461832-29461882)
chr7 (704-738)||(37129864-37129898)
chr7 (371-416)||(1399162-1399207)
chr7 (370-415)||(3672569-3672614)
chr7 (371-428)||(10244727-10244784)
chr7 (371-428)||(19626529-19626586)
chr7 (377-426)||(27263347-27263396)
chr7 (377-426)||(27270241-27270290)
chr7 (371-428)||(29726800-29726857)
chr7 (371-416)||(37451253-37451298)
chr7 (371-428)||(39926542-39926599)
chr7 (371-416)||(44558790-44558835)
[»] chr4 (50 HSPs)
chr4 (373-428)||(22040652-22040707)
chr4 (377-428)||(32339333-32339384)
chr4 (370-428)||(28435252-28435310)
chr4 (371-428)||(37310030-37310087)
chr4 (371-426)||(13578477-13578532)
chr4 (371-426)||(26347078-26347133)
chr4 (371-426)||(39697874-39697929)
chr4 (698-753)||(48097966-48098021)
chr4 (372-426)||(42134469-42134523)
chr4 (381-426)||(1439631-1439676)
chr4 (371-428)||(14202483-14202540)
chr4 (370-415)||(16743301-16743346)
chr4 (371-416)||(20096286-20096331)
chr4 (362-411)||(35851728-35851777)
chr4 (371-428)||(43627271-43627328)
chr4 (371-428)||(43722765-43722822)
chr4 (371-428)||(47490711-47490768)
chr4 (698-738)||(20262116-20262156)
chr4 (371-426)||(9661553-9661608)
chr4 (371-426)||(11375901-11375956)
chr4 (698-753)||(12658259-12658314)
chr4 (369-428)||(20383486-20383545)
chr4 (381-428)||(30057235-30057282)
chr4 (371-426)||(35207163-35207218)
chr4 (371-426)||(39023178-39023233)
chr4 (371-426)||(43978011-43978066)
chr4 (371-426)||(47890698-47890753)
chr4 (371-426)||(51465337-51465392)
chr4 (375-418)||(54103584-54103627)
chr4 (369-407)||(21442660-21442698)
chr4 (376-422)||(24540848-24540894)
chr4 (371-413)||(25867530-25867572)
chr4 (371-425)||(32293111-32293165)
chr4 (362-408)||(37209032-37209078)
chr4 (372-426)||(42425888-42425942)
chr4 (371-417)||(44189002-44189048)
chr4 (371-413)||(53572352-53572394)
chr4 (378-416)||(54587907-54587945)
chr4 (370-416)||(56204946-56204992)
chr4 (370-415)||(627005-627050)
chr4 (371-416)||(6459940-6459985)
chr4 (370-411)||(10010398-10010439)
chr4 (371-416)||(21052573-21052618)
chr4 (370-411)||(30135139-30135180)
chr4 (371-428)||(32006500-32006557)
chr4 (371-428)||(39171374-39171431)
chr4 (363-428)||(42502808-42502873)
chr4 (371-416)||(43034358-43034403)
chr4 (371-428)||(43374276-43374333)
chr4 (377-422)||(56479242-56479287)
[»] chr5 (42 HSPs)
chr5 (371-416)||(7713532-7713577)
chr5 (370-430)||(16076430-16076490)
chr5 (371-426)||(546805-546860)
chr5 (371-426)||(25604006-25604061)
chr5 (377-428)||(38495148-38495199)
chr5 (371-426)||(40361591-40361646)
chr5 (372-426)||(8241054-8241108)
chr5 (374-428)||(38756733-38756787)
chr5 (371-428)||(10241728-10241785)
chr5 (371-416)||(20258545-20258590)
chr5 (377-426)||(33736026-33736075)
chr5 (705-742)||(34032138-34032175)
chr5 (371-416)||(40445983-40446028)
chr5 (370-426)||(4238320-4238376)
chr5 (370-426)||(22228974-22229030)
chr5 (371-426)||(2362972-2363027)
chr5 (377-416)||(5614771-5614810)
chr5 (371-426)||(6414071-6414125)
chr5 (371-426)||(11637578-11637633)
chr5 (371-414)||(12672259-12672302)
chr5 (371-426)||(15241399-15241454)
chr5 (371-426)||(18872667-18872722)
chr5 (365-428)||(28758428-28758491)
chr5 (377-428)||(29695021-29695072)
chr5 (371-426)||(36124402-36124457)
chr5 (700-738)||(3166962-3167000)
chr5 (370-428)||(11720893-11720950)
chr5 (372-426)||(17175063-17175117)
chr5 (375-413)||(38097279-38097317)
chr5 (371-428)||(2839798-2839855)
chr5 (371-416)||(3671218-3671263)
chr5 (371-416)||(5107261-5107306)
chr5 (371-416)||(8545005-8545050)
chr5 (371-416)||(11017176-11017221)
chr5 (700-753)||(22873487-22873540)
chr5 (371-428)||(27679498-27679555)
chr5 (371-428)||(27903113-27903170)
chr5 (371-424)||(34206227-34206280)
chr5 (371-428)||(34436851-34436908)
chr5 (371-416)||(36623190-36623235)
chr5 (371-428)||(40715953-40716010)
chr5 (371-416)||(41650955-41651000)
[»] chr3 (39 HSPs)
chr3 (370-426)||(53432749-53432805)
chr3 (369-428)||(16663240-16663299)
chr3 (371-426)||(40963723-40963778)
chr3 (370-416)||(552173-552219)
chr3 (362-416)||(19468442-19468496)
chr3 (370-428)||(38130963-38131021)
chr3 (377-426)||(4200597-4200646)
chr3 (371-416)||(7827508-7827553)
chr3 (371-416)||(7829896-7829941)
chr3 (371-416)||(12976618-12976663)
chr3 (371-428)||(47099039-47099096)
chr3 (377-422)||(52992075-52992120)
chr3 (372-428)||(17218492-17218548)
chr3 (362-426)||(23653228-23653292)
chr3 (371-415)||(35126286-35126330)
chr3 (370-426)||(51772891-51772947)
chr3 (370-426)||(52984012-52984068)
chr3 (371-426)||(4227756-4227811)
chr3 (377-416)||(21160058-21160097)
chr3 (371-426)||(21331423-21331478)
chr3 (371-426)||(29373461-29373516)
chr3 (371-426)||(30779579-30779634)
chr3 (371-426)||(34847546-34847601)
chr3 (371-414)||(37921016-37921059)
chr3 (371-426)||(39719938-39719993)
chr3 (371-426)||(45871020-45871075)
chr3 (371-426)||(52309122-52309177)
chr3 (371-426)||(52945898-52945953)
chr3 (362-416)||(27397628-27397682)
chr3 (371-417)||(28093354-28093400)
chr3 (372-426)||(28396794-28396848)
chr3 (370-428)||(36834715-36834773)
chr3 (371-413)||(44364024-44364066)
chr3 (371-416)||(7824807-7824852)
chr3 (371-416)||(11574253-11574298)
chr3 (371-428)||(39779024-39779081)
chr3 (371-428)||(48315028-48315085)
chr3 (371-428)||(48517671-48517728)
chr3 (371-428)||(50037311-50037368)
[»] scaffold0021 (1 HSPs)
scaffold0021 (370-428)||(161140-161198)
[»] scaffold0088 (1 HSPs)
scaffold0088 (371-416)||(48021-48066)
[»] scaffold0268 (1 HSPs)
scaffold0268 (708-753)||(20285-20330)
[»] scaffold0122 (1 HSPs)
scaffold0122 (371-416)||(14202-14247)
[»] scaffold0070 (1 HSPs)
scaffold0070 (377-422)||(42942-42987)
[»] scaffold0066 (1 HSPs)
scaffold0066 (361-426)||(17494-17559)
[»] scaffold0011 (1 HSPs)
scaffold0011 (704-753)||(219210-219259)
[»] scaffold0009 (1 HSPs)
scaffold0009 (705-750)||(189090-189135)


Alignment Details
Target: chr8 (Bit Score: 286; Significance: 1e-160; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 424 - 892
Target Start/End: Original strand, 7948473 - 7948943
Alignment:
Q  424 ttcaatcactagactatttaactagaaaaaagagaagcaacttgttatacaaatgaacttctctttgtccacaagtaaccagtccattacttagtcataa 523  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||    
T  7948473 ttcaaccactagactatttaacctgaaaaaagagaagcaacttgttatacaaatgaacttctctttgtccacaagtaacca-----ttacttagtcataa 7948567  T
Q  524 gatcatcacggtaataccatattcattctcccttcnnnnnnntacaacattaattctgaaactaatcttgggcataacaaattaattttttctct--caa 621  Q
    |||||||||||||||| ||||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||    
T  7948568 gatcatcacggtaatatcatattcattctcccttcaaaaaaatacaacattaattctcaaactaatcttgggcataacaaattaattttttttctttcaa 7948667  T
Q  622 atacttc--gttccttttaaatttttgttttaatgtttatgaacacgtactaataaatcaatatagatgttatttttcattaaaaaattattctttaaaa 719  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  7948668 atacttctcgttccttttaaatttttgttttaatgtttatgaacacgtactaataaattaatatagatgttattttttattaaaaaataattctttaaaa 7948767  T
Q  720 aagttagatatttcaatttcaaatgcattaaatataannnnnnnnnnnaaaacttaccataaggtccttaaagagtgtctcggggacactcatttgcatt 819  Q
    |||||| ||| ||||||||||||||||||||||||||           ||||||||||||||| |||||||||||||| ||||||||||||||||| |||    
T  7948768 aagttaaatacttcaatttcaaatgcattaaatataa-aaaattcttaaaaacttaccataagatccttaaagagtgtttcggggacactcatttgaatt 7948866  T
Q  820 ttactggtcttactaacgaatgccaaga---aagtggtgatggggtgaggcgacttggctctc-agtttgtttaaaa 892  Q
    || ||| ||||||||||||||||| |||   |||||||||||||||||||||||||||||||| |||||||||||||    
T  7948867 tttctgatcttactaacgaatgccgagaaataagtggtgatggggtgaggcgacttggctctcaagtttgtttaaaa 7948943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 21 - 426
Target Start/End: Original strand, 7948027 - 7948430
Alignment:
Q  21 atttgttagataagataagatatttcatagcgaggatagattgaccgaaggaattgctttgtcaatggagatttttgtcggagtcaatagaagttgagtt 120  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  7948027 atttgttagataagataagatatgccatagcgaggatagattgacggaaggaattgctttgtcaatggaggtttttgtcggaatcaatagaagttgagtt 7948126  T
Q  121 gttcgacaaaggatgtactagnnnnnnncactccaacgctcaattcagtttatgcttgagaatggtgaaagagctaaaatgattcacgagaattgggtct 220  Q
    ||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  7948127 gttcgacaaaggatgtacta-aaaaaaacactccaacgctcaattcaatttatgcttgagaatggtgagagagctaaaatgattcacaagaattgggtct 7948225  T
Q  221 tggccctatctagaacaaacaataaaagaaataaaatattttatgc-nnnnnnnnaccacttggagtttc------tccgccacattgaatacccaccca 313  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||         |||||||| ||||||      ||| ||||||||||||||||||||    
T  7948226 tggccctatctagaac-aacaataaaagaaataaaatattttacgctttttttttaccacttgtagtttctctttatccaccacattgaatacccaccca 7948324  T
Q  314 atacaaagatgtcatttctcatttaatatgtcatagagaatcatcttgtttgtctatgtgagtttaactcagttgatatggatattgcataatatatgca 413  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||||||||||         ||||||||||||||||  || ||| |||||||||||||    
T  7948325 atataaagatgtcatttctcatttaatatgtcatagagaagcatcttgtttgt-------tctttaactcagttgatagagacattacataatatatgca 7948417  T
Q  414 agggtcggggttc 426  Q
     |||| |||||||    
T  7948418 ggggttggggttc 7948430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 7942215 - 7942328
Alignment:
Q  7 aattgtgaacgtagatttgttagataagataagatatttcatagcgaggatagattgaccgaaggaattgctttgtcaatggagatttttgtcggagtca 106  Q
    |||||||| | |||||||||| |||||||||| |||| |||||| ||||||| || ||  |||||||||||||||||||||||| ||||||| ||| |||    
T  7942215 aattgtgagcatagatttgttggataagataa-atatctcatagggaggatatatcgatggaaggaattgctttgtcaatggaggtttttgtgggaatca 7942313  T
Q  107 atagaagttgagttg 121  Q
    || ||||||| ||||    
T  7942314 atggaagttgtgttg 7942328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 936 - 1002
Target Start/End: Original strand, 7948997 - 7949066
Alignment:
Q  936 aaaaacacttataccattttgagattatgttga-ttaatt-aacttattyta-tttgaggttattgttga 1002  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||| || |||||||||||||||||    
T  7948997 aaaaatacttataccattttgagattatgttgatttaattaaacttattctattttgaggttattgttga 7949066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 8717536 - 8717479
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||| |||||||| |||||| | |||||||||||||||||| |||||||||||    
T  8717536 gtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaa 8717479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 6447189 - 6447234
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||    
T  6447189 gtgagtttaactcagttggtatggacaatgcataatatatgcaagg 6447234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 7942404 - 7942471
Alignment:
Q  197 aaatgattcacgagaattgggtcttggccctatctagaacaaacaataaaagaaataaaatattttatgc 266  Q
    ||||||||||  ||||||||||||||||||  |||| ||||| |||||||||||| ||||||||||||||    
T  7942404 aaatgattcataagaattgggtcttggcccg-tctaaaacaa-caataaaagaaacaaaatattttatgc 7942471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 13105092 - 13105149
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||| |||||||||||| || ||| | ||||||||||||||||||| ||||||||    
T  13105092 atgtgagattaactcagttggtagggacaatgcataatatatgcaagggccggggttc 13105149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 19701405 - 19701360
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  19701405 gtgagtttaactcagttgataaggataatgcataatatatgtaagg 19701360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 37999481 - 37999436
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||    
T  37999481 gtgagcttaactcagttggtatggataatgcataatatatgcaagg 37999436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 27077165 - 27077109
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  27077165 tgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 27077109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 697 - 753
Target Start/End: Complemental strand, 39691207 - 39691151
Alignment:
Q  697 cattaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    ||||||||||||||||||||||||||| | ||| ||||||||  |||||||| ||||    
T  39691207 cattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaata 39691151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 133418 - 133473
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||| |||||||||||| |||||||| | ||||||||||    
T  133418 gtgagcttagctcagttgatagggatattgcatattatatgcaggagtcggggttc 133473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 2294166 - 2294111
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||| |||||| ||||||| |||| |||||||| ||||||||||||    
T  2294166 gtgagtttagctcaattgatagggatattacatattatatgcaggggtcggggttc 2294111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 2792782 - 2792837
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||| |||||||||||| |||||||| ||| ||||||||    
T  2792782 gtgagcttagctcagttgatagggatattgcatattatatgcaggggccggggttc 2792837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 7388464 - 7388515
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||| || |||||||||||| |||||||| |||| |||||||||    
T  7388464 ttaactcagttggtagggatattgcatattatatgcaggggttggggttcaa 7388515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 8034479 - 8034424
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| ||| ||||||||    
T  8034479 gtgagcttaactcagttggtagggatattgcatattatatgcaggggccggggttc 8034424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 10083166 - 10083221
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| |||||| |||||    
T  10083166 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcgaggttc 10083221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 10573104 - 10573159
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||| || |||||||||||| |||||||| |||| |||||||    
T  10573104 gtgagtttagctcagttggtagggatattgcatattatatgcaggggttggggttc 10573159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 14279632 - 14279577
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||||||||| ||| || | ||||||| |||||||||| |||||||||    
T  14279632 gtgagtttaactcagttggtatagacaatgcataaaatatgcaaggttcggggttc 14279577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29734072 - 29734017
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||||||||| || |||||||| ||| |||||||| | ||||||||||    
T  29734072 gtgagtttaactcagttggtaaggatattgtatattatatgcaggagtcggggttc 29734017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 33617975 - 33618030
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| ||||||| ||||    
T  33617975 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggtgttc 33618030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 36540290 - 36540345
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||  |||||||| ||||||||||||    
T  36540290 gtgagcttaactcagttggtagggatattgcattttatatgcaggggtcggggttc 36540345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 37090680 - 37090625
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||||||||| || |||||||| ||| |||||||| | ||||||||||    
T  37090680 gtgagtttaactcagttggtagggatattgtatattatatgcaggagtcggggttc 37090625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 37141363 - 37141414
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||| ||||||| |||||| | |||||||||||||||||| |||||||||||    
T  37141363 ttaattcagttggtatggacaatgcataatatatgcaaggttcggggttcaa 37141414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 753
Target Start/End: Complemental strand, 37564424 - 37564369
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    ||||| |||||||||||||||||||| | ||| ||||||||| |||| ||||||||    
T  37564424 attaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaata 37564369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 414
Target Start/End: Original strand, 37938495 - 37938538
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaa 414  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||    
T  37938495 gtgagtttagctcagttggtatggataatgcataatatatgcaa 37938538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 40094888 - 40094943
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||| |||||||||||  |||||||| ||||||||||||    
T  40094888 gtgagcttagctcagttgataaggatattgcattttatatgcaggggtcggggttc 40094943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 44643036 - 44643091
Alignment:
Q  373 gagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||||  | | ||||||| ||||||||| ||||||||||||||    
T  44643036 gagtttaactcagttgatgggaacattgcattatatatgcaggggtcggggttcaa 44643091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 14582505 - 14582452
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||||||||| || |||||||||||| ||||||  |||||||||||||    
T  14582505 tgagtttaactcagttgttagggatattgcatattatatg-gagggtcggggttc 14582452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 24696069 - 24696023
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    ||||||| ||| ||||||||||||||| | |||||||||||||||||    
T  24696069 atgtgagattatctcagttgatatggacaatgcataatatatgcaag 24696023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 362 - 428
Target Start/End: Complemental strand, 32051602 - 32051536
Alignment:
Q  362 tttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| ||||||| ||| |||||||| | |||| | ||||||||||||||||||  ||||||||||    
T  32051602 tttgtccatgtgagcttagctcagttggtttggacaatgcataatatatgcaaggtccggggttcaa 32051536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 1877723 - 1877678
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||||||| || | ||||||||||||||||||    
T  1877723 gtgagcttaactcagttgatatagacaatgcataatatatgcaagg 1877678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 698 - 755
Target Start/End: Complemental strand, 2335840 - 2335784
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaatata 755  Q
    ||||| ||||||||  |||||||| ||| ||||||||||||| |||||||||||||||    
T  2335840 attaagaaattatttattaaaaaaattaaatatttcaatttc-aatgcattaaatata 2335784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 7553679 - 7553724
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||| || ||| | ||||||||||||||||||    
T  7553679 gtgagtttaactcagttggtagggacaatgcataatatatgcaagg 7553724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 10982726 - 10982783
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| |||||| | |  ||||||||||||||| |||||||||||    
T  10982726 gtgagcttaactcagttggtatggacaatatataatatatgcaaggttcggggttcaa 10982783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 12714431 - 12714374
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||| ||||||||  | ||| | |||||||||||||||||| |||||||||||    
T  12714431 gtgagtttagctcagttggaagggacaatgcataatatatgcaaggttcggggttcaa 12714374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 13357502 - 13357457
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||||| | ||||||||||||||||||    
T  13357502 gtgagcttaactcagttggtatggacaatgcataatatatgcaagg 13357457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 22487878 - 22487931
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggt 424  Q
    ||||||||| |||||||| || |||||||||||  ||||||||||||| |||||    
T  22487878 gtgagtttagctcagttggtagggatattgcattttatatgcaagggttggggt 22487931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 698 - 747
Target Start/End: Complemental strand, 25163114 - 25163065
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcat 747  Q
    |||||||||||||||||  ||||||| | ||||||||||||| |||||||    
T  25163114 attaaaaaattattcttagaaaaagtcaaatatttcaatttccaatgcat 25163065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 27718955 - 27718910
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||| ||||||||||||||| | ||||||||||||||||||    
T  27718955 gtgagcttagctcagttgatatggacaatgcataatatatgcaagg 27718910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 29621319 - 29621262
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||||||||| || |||||| | |||||||||||| ||||| |||||||||||    
T  29621319 gtgagcttaactcagctggtatggaaaatgcataatatattcaaggttcggggttcaa 29621262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 32115467 - 32115410
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||  |||||| ||||||| | ||||||||||||| |||| |||||||||||    
T  32115467 gtgagtttagttcagttaatatggacaatgcataatatatgtaaggttcggggttcaa 32115410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 33451410 - 33451365
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||| |||||||| |||||||| ||||||||||||||||||    
T  33451410 gtgagcttagctcagttggtatggataatgcataatatatgcaagg 33451365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 35939490 - 35939547
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||| ||||||||||    
T  35939490 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcaa 35939547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 38402254 - 38402311
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| || |||||||||||| ||| |||| |||| |||||||||    
T  38402254 gtgagcttaactcagttggtagggatattgcatattatttgcaggggttggggttcaa 38402311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 42576021 - 42575980
Alignment:
Q  373 gagtttaactcagttgatatggatattgcataatatatgcaa 414  Q
    |||||||||||||| | |||||||| ||||||||||||||||    
T  42576021 gagtttaactcagtcggtatggataatgcataatatatgcaa 42575980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 49868010 - 49868056
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  49868010 tgtgagtttaactcagttgatatggataatgcataatatatgcaagg 49868056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 698 - 753
Target Start/End: Original strand, 1600963 - 1601018
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    |||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  1600963 attacaaaattattctttaaaaatgttaaatagttcaatttcaaatgcattaaata 1601018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 44641527 - 44641584
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||  ||||||||||    
T  44641527 gtgagtttagctcagttgatatggacaatgcataatatatgcaaggcccggggttcaa 44641584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 1247257 - 1247313
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||| ||||||||||||||| |||||||||||||| |||||| |||||| |||||    
T  1247257 tgtgagcttaactcagttgataaggatattgcataatttatgcaggggtcgaggttc 1247313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 621580 - 621635
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||| |||||||||||||||| |||||||||||| | |||||| ||||||||||||    
T  621580 gtgaatttaactcagttgatagggatattgcatattttatgcaggggtcggggttc 621635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 698 - 753
Target Start/End: Complemental strand, 5423838 - 5423783
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    |||| ||||||||||||||||||||||| ||| ||||||||  |||||||||||||    
T  5423838 attagaaaattattctttaaaaaagttaaatagttcaattttcaatgcattaaata 5423783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 44732636 - 44732691
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||||||| ||||||||    
T  44732636 gtgagcttaactcagttggtagggatattgcatattatatgcaagggccggggttc 44732691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 381 - 415
Target Start/End: Original strand, 782181 - 782215
Alignment:
Q  381 ctcagttgatatggatattgcataatatatgcaag 415  Q
    |||||||||||||||||||||||||||||||||||    
T  782181 ctcagttgatatggatattgcataatatatgcaag 782215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 34521252 - 34521194
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||| |||||||| |||||| | ||||||||||||||||||  ||||||||||    
T  34521252 tgtgagtttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaa 34521194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 42127684 - 42127630
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggtt 425  Q
    |||||||||||||| ||| ||||||||||||||| ||||| |||||||| |||||    
T  42127684 gtgagtttaactcaattggtatggatattgcatattatatacaagggtcagggtt 42127630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 3777718 - 3777775
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||||||||||||||||||||| || ||||||||| ||||| ||| |||||||    
T  3777718 gtgagcttaactcagttgatatggataatgtataatatatacaaggttcgaggttcaa 3777775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 19396252 - 19396207
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||    
T  19396252 gtgagtttaactcagttggtagggataatgcataatatatgcaagg 19396207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 415
Target Start/End: Original strand, 24631838 - 24631883
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||    
T  24631838 tgtgagtttaactcagttggtaaggataatgcataatatatgcaag 24631883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 31759954 - 31759909
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  31759954 gtgagcttaactcaattgatatggataatgcataatatatgcaagg 31759909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 52043273 - 52043330
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||| |||||||| |||||||| ||||||| |||||||| | |||||||||||    
T  52043273 gtgagtttagctcagttggtatggataatgcataaaatatgcaatgttcggggttcaa 52043330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 9116933 - 9116893
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatg 411  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  9116933 gtgagtttaactcagttgatatggacaatgcataatatatg 9116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 10292926 - 10292990
Alignment:
Q  361 gtttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggtt 425  Q
    ||||||||  ||||| ||||||||||||||| ||| | ||||||||||||| ||||| |||||||    
T  10292926 gtttgtctccgtgagcttaactcagttgatagggacaatgcataatatatgtaagggacggggtt 10292990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 17917206 - 17917142
Alignment:
Q  364 tgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||| ||||||||||||||| | ||||||| ||||| |||| ||||| |||||    
T  17917206 tgtctttgtgagtttagctcagttgatatggacaatgcataaaatatgtaaggttcgggattcaa 17917142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 370 - 414
Target Start/End: Original strand, 29935982 - 29936026
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaa 414  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||    
T  29935982 tgtgagtttaactcagttggtatggacaatgcataatatatgcaa 29936026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 3393630 - 3393579
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcgg 421  Q
    |||||||||| ||||||||||||| | | |||||||||||||||||| ||||    
T  3393630 tgtgagtttagctcagttgatatgaacaatgcataatatatgcaaggttcgg 3393579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 9866251 - 9866196
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  9866251 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 9866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 35605690 - 35605635
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  35605690 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 35605635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 40051464 - 40051515
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggg 422  Q
    ||||||||||||| ||||| | ||| |||||||||| |||||||||||||||    
T  40051464 gtgagtttaactcggttgaaaaggacattgcataatttatgcaagggtcggg 40051515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 42490477 - 42490422
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  42490477 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 42490422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 44019279 - 44019330
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggg 422  Q
    ||||| ||| ||||||||||| |||||||||||  |||||||||||||||||    
T  44019279 gtgagcttagctcagttgatagggatattgcattttatatgcaagggtcggg 44019330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 47719168 - 47719113
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || ||||| |||||||||||||||||| |||| ||||    
T  47719168 gtgagcttaactcagttggtaaggataatgcataatatatgcaaggttcggagttc 47719113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 706 - 748
Target Start/End: Complemental strand, 4521092 - 4521050
Alignment:
Q  706 attattctttaaaaaagttagatatttcaatttcaaatgcatt 748  Q
    |||||||||||||||||||| | ||||||||||| ||||||||    
T  4521092 attattctttaaaaaagttaaacatttcaatttccaatgcatt 4521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 17669644 - 17669702
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| || |||||||||||| ||| | || ||||||||||||||| |||||||||||    
T  17669644 tgtgagcttgactcagttgatagggacaatgtataatatatgcaaggttcggggttcaa 17669702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 18551700 - 18551646
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggtt 425  Q
    ||||| ||| |||||||| ||||||||||||||| |||||||| ||| |||||||    
T  18551700 gtgagcttagctcagttggtatggatattgcatattatatgcaggggccggggtt 18551646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 382 - 416
Target Start/End: Complemental strand, 25498812 - 25498778
Alignment:
Q  382 tcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||| ||||||||||||||||||||||||    
T  25498812 tcagttgataaggatattgcataatatatgcaagg 25498778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 51067956 - 51067898
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| |||||||||||| || | ||| | |||||||||||||||| |||||||||||    
T  51067956 tgtgagcttaactcagttggtaagaataatacataatatatgcaaggctcggggttcaa 51067898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 1091179 - 1091236
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| ||| || | |||||||| ||||||||| |||||||||||    
T  1091179 gtgagcttaactcagttggtatagacaatgcataatgtatgcaaggttcggggttcaa 1091236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 373 - 410
Target Start/End: Complemental strand, 6844296 - 6844259
Alignment:
Q  373 gagtttaactcagttgatatggatattgcataatatat 410  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  6844296 gagtttaactcagtttacatggatattgcataatatat 6844259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 7160935 - 7160894
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatg 411  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  7160935 tgtgagtttaactcagctgatatagatattgtataatatatg 7160894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 8415732 - 8415789
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||  || |||||||||||| |||||||| ||||||||||||||    
T  8415732 gtgagcttagctcagttcgtagggatattgcatattatatgcaggggtcggggttcaa 8415789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 11065123 - 11065180
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||| |||||  ||||||||||| |||||||| ||||||||||||||    
T  11065123 gtgagcttagctcagatgatagagatattgcatattatatgcaggggtcggggttcaa 11065180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 13794569 - 13794524
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||| ||||||||||| ||||| ||||||||||||||||||    
T  13794569 gtgagcttagctcagttgataaggataatgcataatatatgcaagg 13794524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 16967255 - 16967198
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| || |||||||||||| | |||||||||||||||||| ||| |||||||    
T  16967255 gtgagcttagcttagttgatatggacaatgcataatatatgcaaggttcgaggttcaa 16967198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 26755616 - 26755673
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||||||||||||| | ||||| ||||||||||||  ||||||||||    
T  26755616 gtgagcttagctcagttgatatggacaatgcattatatatgcaaggtccggggttcaa 26755673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 698 - 755
Target Start/End: Complemental strand, 26857283 - 26857226
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaatata 755  Q
    |||| ||||||||||||||||||||||| ||| || |||||  |||||||| ||||||    
T  26857283 attagaaaattattctttaaaaaagttaaatagtttaattttcaatgcattgaatata 26857226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 37662624 - 37662571
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggt 424  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||    
T  37662624 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggt 37662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 41974761 - 41974806
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||  |||||||||| ||||| ||||||||||||||||||    
T  41974761 gtgagtttagttcagttgatagggataatgcataatatatgcaagg 41974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 384 - 425
Target Start/End: Original strand, 42366879 - 42366920
Alignment:
Q  384 agttgatatggatattgcataatatatgcaagggtcggggtt 425  Q
    |||||||| |||||||||||  ||||||||||||||||||||    
T  42366879 agttgatagggatattgcattttatatgcaagggtcggggtt 42366920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 42416813 - 42416858
Alignment:
Q  381 ctcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||| ||||| |||||||||||||||||| | |||||||    
T  42416813 ctcagttgataaggataatgcataatatatgcaaggtttggggttc 42416858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 753
Target Start/End: Original strand, 44442270 - 44442319
Alignment:
Q  704 aaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    |||||||||||||||||||| | ||||||||||||  ||| |||||||||    
T  44442270 aaattattctttaaaaaagtcaaatatttcaattttcaatacattaaata 44442319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 46225390 - 46225447
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| || |||||||||||  |||||||| ||||||||||||||    
T  46225390 gtgagcttagctcagttggtagggatattgcattttatatgcaggggtcggggttcaa 46225447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 47478915 - 47478858
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| || |||||||||||| |||||| | || |||||||||||    
T  47478915 gtgagcttaactcagttggtagggatattgcatattatatgtagggatcggggttcaa 47478858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 24623385 - 24623321
Alignment:
Q  364 tgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||| ||||||||||||||| | ||||||||||||| |||| |||||||||||    
T  24623385 tgtctttgtgagtttagctcagttgatatggacaatgcataatatatgtaaggttcggggttcaa 24623321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 755
Target Start/End: Complemental strand, 387528 - 387471
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaatata 755  Q
    |||||||||||||  ||||||||||||| | | ||||||||||||||||| |||||||    
T  387528 attaaaaaattatattttaaaaaagttaaacaattcaatttcaaatgcatcaaatata 387471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 8569709 - 8569766
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||||| ||| |||||| | ||||||||||||||||||  ||||||||||    
T  8569709 gtgagtttaactcaattggtatggacaatgcataatatatgcaaggtccggggttcaa 8569766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 8629757 - 8629700
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||| ||| |||||| | |||||||||||||||||| |||||||||||    
T  8629757 gtgagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggttcaa 8629700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 426
Target Start/End: Original strand, 32388235 - 32388284
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||||||| ||| |||||||||| |||||| ||||||||||||    
T  32388235 ttaactcagttgatagggacattgcataatttatgcaggggtcggggttc 32388284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 3373442 - 3373398
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    |||| |||||||||||||||||||| | |||||||||||||||||    
T  3373442 gtgaatttaactcagttgatatggacaatgcataatatatgcaag 3373398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 978201 - 978146
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||  || |||||||||||| |||||||| ||||||||||||    
T  978201 gtgagtttagctcagttagtagggatattgcatattatatgcaggggtcggggttc 978146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 3294767 - 3294822
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  3294767 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 3294822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 3640517 - 3640572
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||||||| ||||||||    
T  3640517 gtgagcttagctcagttggtagggatattgcatagtatatgcaagggccggggttc 3640572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 9372268 - 9372213
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  9372268 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 9372213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 10517202 - 10517257
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| ||||||||||||||  |||||||| ||||||||||||    
T  10517202 gtgagcttagctcagttggtatggatattgcattttatatgcaggggtcggggttc 10517257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 16966451 - 16966404
Alignment:
Q  381 ctcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||| || |||||||||||| |||||||||| ||||||||||||    
T  16966451 ctcagttggtagggatattgcatattatatgcaagtgtcggggttcaa 16966404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 20568352 - 20568297
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || ||| ||||||||||||||||| ||||||||||||    
T  20568352 gtgagcttagctcagttggtaaggacattgcataatatatgcaggggtcggggttc 20568297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 31705902 - 31705957
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| |||||||||||||| ||||||| | ||||||||||||    
T  31705902 gtgagcttagctcagttggtatggatattgcattatatatgtaggggtcggggttc 31705957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 33697180 - 33697125
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||||||||||||||| |||||||||||  |||||||| ||||||| ||||    
T  33697180 gtgagcttaactcagttgatagggatattgcattttatatgcaggggtcggagttc 33697125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 2692213 - 2692259
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    ||||||| ||| ||||||||||||||| | |||||||||||||||||    
T  2692213 atgtgagattatctcagttgatatggacaatgcataatatatgcaag 2692259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 1918519 - 1918474
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||| ||| || | ||||||||||||||||||    
T  1918519 gtgagtttaactcagttggtatagacaatgcataatatatgcaagg 1918474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 2726472 - 2726423
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||| |||||| | ||||||||||||||||||  ||||||||    
T  2726472 ttaactcagttggtatggacaatgcataatatatgcaaggtccggggttc 2726423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 7328714 - 7328657
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| || |||||||||||  ||||| || ||||||||||||||    
T  7328714 gtgagcttaactcagttggtagggatattgcattttatatccaggggtcggggttcaa 7328657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 8834930 - 8834987
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||||||||||||||| ||||| |||||||| ||||||| |  ||||||||||    
T  8834930 gtgagcttaactcagttgataaggataatgcataatgtatgcaaagtccggggttcaa 8834987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 10018400 - 10018456
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||| |||||||| || ||||| ||||||||||||| |||| |||||||||||    
T  10018400 gtgagtttagctcagttggta-ggataatgcataatatatgtaaggttcggggttcaa 10018456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 374 - 411
Target Start/End: Original strand, 10999153 - 10999190
Alignment:
Q  374 agtttaactcagttgatatggatattgcataatatatg 411  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  10999153 agtttaactcagttgataaggacattgcataatatatg 10999190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 12904378 - 12904321
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||||||||||| | | |||||||||||||||||| |||| ||||||    
T  12904378 gtgagcttacctcagttgatatgaacaatgcataatatatgcaaggttcggagttcaa 12904321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 13496116 - 13496161
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||||| | | ||||||||||||||||||    
T  13496116 gtgagcttaactcagttgatatgaacaatgcataatatatgcaagg 13496161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 13732815 - 13732860
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| || |||||||||||| |||||||||||    
T  13732815 gtgagcttaactcagttggtagggatattgcatattatatgcaagg 13732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 16913953 - 16913912
Alignment:
Q  385 gttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||| |||||||||||| |||||||| ||||||||||||    
T  16913953 gttgataaggatattgcatattatatgcaggggtcggggttc 16913912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 23610386 - 23610329
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| || ||| |||||||||| |||||| ||||||||||||||    
T  23610386 gtgagcttagctcagttggtagggacattgcataatttatgcaggggtcggggttcaa 23610329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 32053788 - 32053845
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| |||||| | |||||||||||||||||| ||| |||||||    
T  32053788 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaa 32053845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 32620132 - 32620083
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||||||||||| |||||||||| |||||| | || |||||||    
T  32620132 ttaactcagttgatatggacattgcataatttatgcaggagttggggttc 32620083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 5168639 - 5168583
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||| |||||||||||    
T  5168639 tgagcttaactcagttgatagggataatgcataatatatgcaaggttcggggttcaa 5168583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 25186303 - 25186246
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||  ||||||||||    
T  25186303 gtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaa 25186246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 37119320 - 37119271
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtc 419  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||||    
T  37119320 tgtgagtttaactcagttgatatgaacaatgcataatatatgcaagggtc 37119271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 377 - 428
Target Start/End: Complemental strand, 9547464 - 9547413
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||||| | |||||||||||||||||| | |||||||||    
T  9547464 ttaactcagttgatatggacaatgcataatatatgcaaggtttggggttcaa 9547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 32609254 - 32609199
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||||| ||||||||||    
T  32609254 gtgagcttaactcagttggtagggatattgcatattatatgcaagagtcggggttc 32609199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 44694694 - 44694745
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||||||| || | |||||||||||||||||| |||||||||||    
T  44694694 ttaactcagttgatatagacaatgcataatatatgcaaggctcggggttcaa 44694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 29734690 - 29734736
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||    
T  29734690 tgtgagtttagctcagttgatatggacaatgcataatatatgcaagg 29734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 6723138 - 6723093
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||||||| | || |||||||||||||||    
T  6723138 gtgagtttaactcagttgatatggacaatgtataatatatgcaagg 6723093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 18324964 - 18324911
Alignment:
Q  362 tttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    |||||||||||||| |||||||||||| || ||| | |||||||||||||||||    
T  18324964 tttgtctatgtgagcttaactcagttggtaaggacaatgcataatatatgcaag 18324911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 10195723 - 10195679
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  10195723 gtgagcttagctcagttgatatggataatgcataatatatgcaag 10195679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 369 - 413
Target Start/End: Complemental strand, 37352562 - 37352518
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgca 413  Q
    |||||||||||||||||||| || |||||||||||| ||||||||    
T  37352562 atgtgagtttaactcagttggtagggatattgcatattatatgca 37352518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 369 - 413
Target Start/End: Original strand, 42039209 - 42039253
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgca 413  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||    
T  42039209 atgtgagtttagctcagttgatatggatagtgcatattatatgca 42039253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 7379667 - 7379612
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| ||||||||  |||||||||||    
T  7379667 gtgagcttaactcagttggtaaggatattgcatattatatgcagaggtcggggttc 7379612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 748
Target Start/End: Original strand, 8964413 - 8964456
Alignment:
Q  705 aattattctttaaaaaagttagatatttcaatttcaaatgcatt 748  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||    
T  8964413 aattattctttaaaaaagtaaaatatttcaatttccaatgcatt 8964456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 19159947 - 19159998
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||| | | |||||||||||||||||| |||| ||||||    
T  19159947 ttaactcagttgatatgaacaatgcataatatatgcaaggttcggagttcaa 19159998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 23405199 - 23405254
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || ||| ||||||||||||||||| ||||||||||||    
T  23405199 gtgagcttagctcagttggtagggacattgcataatatatgcaggggtcggggttc 23405254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 27411092 - 27411147
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||||||||||  |||||||||||||||||||  ||||||||    
T  27411092 gtgagcttagctcagttgatatggaccttgcataatatatgcaaggtccggggttc 27411147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 33041930 - 33041887
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaa 414  Q
    |||||||||||||||||| || |||||||||||| |||||||||    
T  33041930 gtgagtttaactcagttggtagggatattgcatattatatgcaa 33041887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 39408757 - 39408702
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||||| | ||||||||    
T  39408757 gtgagcttaactcagttggtagggatattgcatattatatgcaagagccggggttc 39408702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 40363138 - 40363083
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||| | ||||||||||||    
T  40363138 gtgagcttaactcagttggtagggatattgcatattatatgtaggggtcggggttc 40363083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 753
Target Start/End: Original strand, 44195521 - 44195576
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    ||||| ||||||||||||| |||||||| ||| ||||||||  |||||||||||||    
T  44195521 attaagaaattattctttacaaaagttaaataattcaatttacaatgcattaaata 44195576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 44666410 - 44666355
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||| |||| | ||||||||||||||||||||| || |||||||||    
T  44666410 gtgagtttagctcaattgacagggatattgcataatatatgcagggatcggggttc 44666355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 416
Target Start/End: Original strand, 6141215 - 6141265
Alignment:
Q  366 tctatgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||| |||||||| || ||| | ||||||||||||||||||    
T  6141215 tctatgtgagtttatctcagttggtaaggacaatgcataatatatgcaagg 6141265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 698 - 752
Target Start/End: Complemental strand, 14663272 - 14663218
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaat 752  Q
    ||||||||||||||||||||| |||| | ||| ||||||||| ||| ||||||||    
T  14663272 attaaaaaattattctttaaataagtcaaatagttcaatttccaatacattaaat 14663218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 16204879 - 16204833
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||| ||||||||||||||| ||| | ||||||||||||||||||    
T  16204879 tgtgagcttaactcagttgataaggacaatgcataatatatgcaagg 16204833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 20120783 - 20120725
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| ||| |||||||| || ||| | |||||||||||||||||| |||||||||||    
T  20120783 tgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcaa 20120725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 27152352 - 27152398
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||| |||||||||||| || ||||| ||||||||||||||||||    
T  27152352 tgtgagcttaactcagttggtagggataatgcataatatatgcaagg 27152398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 34376893 - 34376943
Alignment:
Q  378 taactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||| || ||||||||||||| |||||||||| ||| |||||||    
T  34376893 taactcagttggtaaggatattgcataaaatatgcaaggttcgaggttcaa 34376943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 35281273 - 35281215
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||| ||||| ||||||||| ||||||| || ||||||||||||||| ||| |||||||    
T  35281273 tgtgtgtttagctcagttgaaatggataatgtataatatatgcaaggttcgaggttcaa 35281215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 36264541 - 36264483
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| |||| ||| ||| |||||||| |||||||||||||||| | |||||||||||    
T  36264541 tgtgagcttaattcaattggtatggataatgcataatatatgcaaagttcggggttcaa 36264483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 41859851 - 41859897
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||| |||||| | ||||||| ||||||||||    
T  41859851 tgtgagtttaactcagttggtatggacaatgcataaaatatgcaagg 41859897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 43146355 - 43146397
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgca 413  Q
    |||||||||||||||||| || |||||||||||||| ||||||    
T  43146355 gtgagtttaactcagttggtagggatattgcataatttatgca 43146397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 2256971 - 2257016
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||||| | ||||||||||||||||||    
T  2256971 gtgagcttaactcagttggtatggacaatgcataatatatgcaagg 2257016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 5676739 - 5676796
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| ||  || | |||||||||||||||||||| |||||||||    
T  5676739 gtgagcttaactcagttggtaatgacaatgcataatatatgcaagggtgggggttcaa 5676796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 9389468 - 9389513
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||| |||||| ||||| || |||||||||||||||    
T  9389468 gtgagtttaactcaattgataaggataatgtataatatatgcaagg 9389513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 426
Target Start/End: Original strand, 13196706 - 13196755
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||| |||| | | |||||||||||||||||| |||||||||    
T  13196706 ttaactcagttggtatgaacaatgcataatatatgcaaggttcggggttc 13196755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 18559277 - 18559240
Alignment:
Q  374 agtttaactcagttgatatggatattgcataatatatg 411  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  18559277 agtttaactcagttgatagggatattgcatattatatg 18559240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 20239343 - 20239388
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||| |||||| ||||| ||||||||||||||||||    
T  20239343 gtgagcttaactcaattgatagggataatgcataatatatgcaagg 20239388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 23919550 - 23919489
Alignment:
Q  365 gtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||| |||||| ||| |||||||| || ||| ||||||||||||||| | ||||||||||||    
T  23919550 gtctctgtgagcttagctcagttggtagggacattgcataatatatggaggggtcggggttc 23919489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 31543012 - 31543069
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||| || |||||||| ||||||||||||||||||  ||||||||||    
T  31543012 gtgagcttagctcagatggtatggataatgcataatatatgcaaggtccggggttcaa 31543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 31815948 - 31815891
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| || ||| | ||||||||||||||||||  ||||||||||    
T  31815948 gtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaa 31815891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 33063986 - 33064031
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||| ||||||||||||||| | ||||||||||||||||||    
T  33063986 gtgagcttagctcagttgatatggacaatgcataatatatgcaagg 33064031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 34977204 - 34977249
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||||| | ||||||||||||||||||    
T  34977204 gtgagcttaactcagttggtatggacaatgcataatatatgcaagg 34977249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 39761438 - 39761483
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||| ||||||||||| ||| | ||||||||||||||||||    
T  39761438 gtgagtttagctcagttgataaggacaatgcataatatatgcaagg 39761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 40967432 - 40967387
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||| ||| | ||||||||||||||||||    
T  40967432 gtgagcttaactcagttgataaggacaatgcataatatatgcaagg 40967387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 3392470 - 3392525
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||||||||||||||||||| |||||| | ||||||||||||    
T  3392470 gtgagcttaactcagttgatatggatattgcatattatatgtaggggtcggggttc 3392525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 27679077 - 27679023
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggtt 425  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  27679077 gtgagcttaactcagttggtatggatattgcatattatatgcaagggtccgggtt 27679023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 19599145 - 19599202
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||  ||||||||||    
T  19599145 gtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaa 19599202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 34000262 - 34000319
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||||||||    
T  34000262 gtgagcttaactcagttgataaggataatgcataatatatgtaaggttcggggttcaa 34000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 48674629 - 48674572
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||||||| |||||||||||  |||||||| |||| |||||||||    
T  48674629 gtgagtttaactcagttgataaggatattgcattttatatgcaggggttggggttcaa 48674572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 9712265 - 9712210
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| ||||||||||||    
T  9712265 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttc 9712210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 15716751 - 15716697
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||| |||||||| || ||||||||| || |||||||||||||||||||||    
T  15716751 tgagtttagctcagttggtagggatattgcgtattatatgcaagggtcggggttc 15716697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 46916466 - 46916412
Alignment:
Q  374 agtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||||| |||||| |||| |||||| |||| |||||||||||    
T  46916466 agtttaactcagttgatattgatattacatattatatgtaaggatcggggttcaa 46916412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 429239 - 429194
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||||    
T  429239 gtgagcttaactcagttgatatggataatacataatatatgcaagg 429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 5317349 - 5317304
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||    
T  5317349 gtgagcttaactcagttgatatggaaaatgcataatatatgcaagg 5317304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 30872025 - 30872070
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||    
T  30872025 gtgagtttatctcagttggtatggacattgcataatatatgcaagg 30872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 45425451 - 45425508
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||| ||||||||||||||||||  || | |||||||||||||||||| |||||||||    
T  45425451 atgtcagtttaactcagttgataaagacaatgcataatatatgcaaggttcggggttc 45425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 6384844 - 6384896
Alignment:
Q  364 tgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||| ||||||||||| ||| ||| | ||||||||||||||||||    
T  6384844 tgtctatgtgagcttaactcagttaataaggacaatgcataatatatgcaagg 6384896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 15106758 - 15106703
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| | ||||||||||    
T  15106758 gtgagcttaactcagttggtagggatattgcatattatatgcaggagtcggggttc 15106703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 30806118 - 30806173
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||| || |||||||||||| |||||||| ||||||| ||||    
T  30806118 gtgagtttagctcagttggtagggatattgcatattatatgcaggggtcggagttc 30806173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 32315223 - 32315278
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||||||||||||||| ||| ||| |||||||||||||||| || ||||||    
T  32315223 gtgagcttaactcagttgataaggacattacataatatatgcaaggttcagggttc 32315278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 32855526 - 32855577
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||| ||| |||||||||||||||| | |||| ||||||    
T  32855526 ttaactcagttgatatgaataatgcataatatatgcaaagttcggagttcaa 32855577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 426
Target Start/End: Original strand, 38151339 - 38151402
Alignment:
Q  363 ttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||||||| ||| |||||||| || ||||||||||| || |||||| ||||||||||||    
T  38151339 ttgtccatgtgagcttagctcagttggtagggatattgcattatttatgcaggggtcggggttc 38151402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 41084042 - 41084097
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  41084042 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 41084097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 42182265 - 42182210
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || || ||||||||| |||||||| ||||||||||||    
T  42182265 gtgagcttaactcagttggtaggggtattgcatattatatgcaggggtcggggttc 42182210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 372 - 418
Target Start/End: Original strand, 12615755 - 12615801
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggt 418  Q
    |||| ||||||||||||||| |||||||||||| |||||||| ||||    
T  12615755 tgagcttaactcagttgatagggatattgcatattatatgcaggggt 12615801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 22991453 - 22991407
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||| |||||||||||| |||||| | ||||||||||||||||||    
T  22991453 tgtgagcttaactcagttggtatggacaatgcataatatatgcaagg 22991407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 29461882 - 29461832
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcgg 421  Q
    |||||||||||||||||| || ||| | ||||||||||||||| |||||||    
T  29461882 gtgagtttaactcagttggtagggacaatgcataatatatgcaggggtcgg 29461832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 704 - 738
Target Start/End: Complemental strand, 37129898 - 37129864
Alignment:
Q  704 aaattattctttaaaaaagttagatatttcaattt 738  Q
    |||||||||||||||||||||| ||||||||||||    
T  37129898 aaattattctttaaaaaagttaaatatttcaattt 37129864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 1399162 - 1399207
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||| |||||| | ||||| ||||||||||||    
T  1399162 gtgagtttaactcagttggtatggacaatgcatgatatatgcaagg 1399207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 3672614 - 3672569
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    |||||||||| ||||||||||||||| | | |||||||||||||||    
T  3672614 tgtgagtttagctcagttgatatggacaatacataatatatgcaag 3672569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 10244727 - 10244784
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| |||||| | ||||||||||||||||||  ||||||||||    
T  10244727 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaa 10244784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 19626586 - 19626529
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| | |||| | ||||||||||||||||||  ||||||||||    
T  19626586 gtgagcttaactcagttggtttggacaatgcataatatatgcaaggtccggggttcaa 19626529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 426
Target Start/End: Original strand, 27263347 - 27263396
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||| |||||| | |||||||||||||||||| |||| ||||    
T  27263347 ttaactcagttggtatggacaatgcataatatatgcaaggttcggagttc 27263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 426
Target Start/End: Original strand, 27270241 - 27270290
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||| |||||| | |||||||||||||||||| |||| ||||    
T  27270241 ttaactcagttggtatggacaatgcataatatatgcaaggttcggagttc 27270290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 29726800 - 29726857
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||||||||||||| ||| | | || ||||||||||||||| |||||||||||    
T  29726800 gtgagcttaactcagttgacatgaacaatgtataatatatgcaaggttcggggttcaa 29726857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 37451298 - 37451253
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||| ||||||||||| ||||| ||||||||||||| ||||    
T  37451298 gtgagtttagctcagttgataaggataatgcataatatatgtaagg 37451253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 39926599 - 39926542
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||||||||| ||| | |||||||||||||||| | |||||||||||    
T  39926599 gtgagcttagctcagttgataaggacaatgcataatatatgcaatgttcggggttcaa 39926542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 44558835 - 44558790
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||| |||||||| |||||| | ||||||||||||||||||    
T  44558835 gtgagtttagctcagttggtatggacaatgcataatatatgcaagg 44558790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 22040652 - 22040707
Alignment:
Q  373 gagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||    
T  22040652 gagtttagctcagttgatatggacaatgcataatatatgcaaggttcggggttcaa 22040707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 32339333 - 32339384
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  32339333 ttaactcagttgttagggatattgcatattatatgcaagggtcggggttcaa 32339384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 28435310 - 28435252
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||| |||||||| |||||| | |||||||||||||||||| |||||||||||    
T  28435310 tgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaa 28435252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 37310030 - 37310087
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||||||||| ||||||||||||||| |||||| | |||| |||||||||    
T  37310030 gtgagtttaactcagttggtatggatattgcatattatatgtaggggttggggttcaa 37310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 13578532 - 13578477
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| ||||||||||||    
T  13578532 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttc 13578477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 26347133 - 26347078
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||| ||||||||    
T  26347133 gtgagtttaactcagttaatagggatattgcatgttatatgcaagggccggggttc 26347078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 39697929 - 39697874
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||| |||||||||||| |||||||| ||||||||||||    
T  39697929 gtgagcttagctcagttgatagggatattgcatattatatgcaggggtcggggttc 39697874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 698 - 753
Target Start/End: Original strand, 48097966 - 48098021
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    ||||| |||||||||||||||||||||| ||| ||||||||| ||| |||||||||    
T  48097966 attaagaaattattctttaaaaaagttaaatagttcaatttccaatacattaaata 48098021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 42134523 - 42134469
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||| |||||||||||  || |||||||||||| |||||||||||||||||||||    
T  42134523 tgagcttaactcagttagtagggatattgcatattatatgcaagggtcggggttc 42134469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 1439631 - 1439676
Alignment:
Q  381 ctcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||    
T  1439631 ctcagttggtatggacattgcatattatatgcaagggtcggggttc 1439676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 14202540 - 14202483
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||||| |||||| ||||||||||||| ||||  ||||||||||    
T  14202540 gtgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttcaa 14202483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 16743346 - 16743301
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  16743346 tgtgagcttagctcagttgatatggataatgcataatatatgcaag 16743301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 20096331 - 20096286
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||    
T  20096331 gtgagtttaactcagttggtagggataatgcataatatatgcaagg 20096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 411
Target Start/End: Complemental strand, 35851777 - 35851728
Alignment:
Q  362 tttgtctatgtgagtttaactcagttgatatggatattgcataatatatg 411  Q
    |||||||||||||| |||||||||||| || ||| |||||||||||||||    
T  35851777 tttgtctatgtgagcttaactcagttggtagggacattgcataatatatg 35851728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 43627328 - 43627271
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||  ||||||||||| || |||||||||| |||||| ||||||||||||||    
T  43627328 gtgagtttagttcagttgatatagacattgcataatttatgcaggggtcggggttcaa 43627271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 43722765 - 43722822
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||||||||| |||||| | ||||||||||||| ||||  ||||||||||    
T  43722765 gtgagtttaactcagttggtatggacaatgcataatatatgtaaggtccggggttcaa 43722822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 47490768 - 47490711
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||| || ||||||||    
T  47490768 gtgagtttaactcagttggtatggataatgcgtaaaatatgcaaggttccgggttcaa 47490711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 698 - 738
Target Start/End: Original strand, 20262116 - 20262156
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaattt 738  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  20262116 attaaaaaattattttttaaaaaagttaaatatttcaattt 20262156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 9661553 - 9661608
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||| ||||||||||||||| |||||| ||| ||||| ||||    
T  9661553 gtgagtttatctcagttggtatggatattgcatattatatgtaagagtcggagttc 9661608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 11375956 - 11375901
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||| |||||||||||| |||||||| ||| ||||||||    
T  11375956 gtgagcttagctcagttgatagggatattgcatattatatgcaggggccggggttc 11375901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 753
Target Start/End: Original strand, 12658259 - 12658314
Alignment:
Q  698 attaaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||  |||||||||||||    
T  12658259 attaaaaaactattctttaaaaaatttaaatattacaatttttaatgcattaaata 12658314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 20383486 - 20383545
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||| ||| |||||||| |||||| | ||||||||||||||||||  ||||||||||    
T  20383486 atgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaa 20383545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 428
Target Start/End: Original strand, 30057235 - 30057282
Alignment:
Q  381 ctcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||| || |||||||||||| |||||||| ||||||||||||||    
T  30057235 ctcagttggtagggatattgcatattatatgcaggggtcggggttcaa 30057282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 35207218 - 35207163
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||||||||||||||| |||||||||||| |||||||| | ||| ||||||    
T  35207218 gtgagcttaactcagttgatagggatattgcatattatatgcaggagtcagggttc 35207163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 39023178 - 39023233
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  39023178 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 39023233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 43978011 - 43978066
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  43978011 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 43978066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 47890698 - 47890753
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||| |||||||||| ||  ||||||||||| |||||||| ||||||||||||    
T  47890698 gtgagttaaactcagttggtagagatattgcatattatatgcaggggtcggggttc 47890753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 51465337 - 51465392
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||| ||||||| |||||| | ||||||||||||| ||||||||||||||    
T  51465337 gtgagcttaattcagttggtatggacaatgcataatatatgtaagggtcggggttc 51465392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 418
Target Start/End: Complemental strand, 54103627 - 54103584
Alignment:
Q  375 gtttaactcagttgatatggatattgcataatatatgcaagggt 418  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||    
T  54103627 gtttaactcagttgatagggatattgcatattatatgcaggggt 54103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 407
Target Start/End: Complemental strand, 21442698 - 21442660
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataata 407  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  21442698 atgtgagtttaactcagttgatagggacattgcataata 21442660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 24540848 - 24540894
Alignment:
Q  376 tttaactcagttgatatggatattgcataatatatgcaagggtcggg 422  Q
    ||||||||||||||||  || | ||||||||||||||||||||||||    
T  24540848 tttaactcagttgatagagacaatgcataatatatgcaagggtcggg 24540894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 25867572 - 25867530
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgca 413  Q
    |||| |||||||| |||| ||||||||||||||||||||||||    
T  25867572 gtgaatttaactctgttggtatggatattgcataatatatgca 25867530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 32293111 - 32293165
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggtt 425  Q
    ||||| ||| ||||||||||| ||| |||||||||| |||||| |||||||||||    
T  32293111 gtgagcttagctcagttgataaggacattgcataatttatgcaggggtcggggtt 32293165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 362 - 408
Target Start/End: Original strand, 37209032 - 37209078
Alignment:
Q  362 tttgtctatgtgagtttaactcagttgatatggatattgcataatat 408  Q
    |||||||||||||  ||||||||||||||| ||| ||||||||||||    
T  37209032 tttgtctatgtgaacttaactcagttgatagggacattgcataatat 37209078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 42425888 - 42425942
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||| |||||||||||| ||||||||||||||| ||||||||  ||| |||||||    
T  42425888 tgagattaactcagttgctatggatattgcatattatatgcagaggttggggttc 42425942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 417
Target Start/End: Complemental strand, 44189048 - 44189002
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaaggg 417  Q
    ||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  44189048 gtgagtttagctcagttggcatggataatgcataatatatgcaaggg 44189002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 53572394 - 53572352
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgca 413  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||    
T  53572394 gtgagcttaactcagttgatagggatattgcatattatatgca 53572352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 54587907 - 54587945
Alignment:
Q  378 taactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  54587907 taactcagttgatatggataatgcataatatatgtaagg 54587945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 56204946 - 56204992
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||| || ||| | ||||||||||||||||||    
T  56204946 tgtgagtttaactcagttggtaaggacaatgcataatatatgcaagg 56204992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 627050 - 627005
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    |||||||||| |||||||| || |||||||||||| ||||||||||    
T  627050 tgtgagtttagctcagttggtagggatattgcatattatatgcaag 627005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 6459985 - 6459940
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||||||| | ||||||||||||| ||||    
T  6459985 gtgagcttaactcagttgatatggacaatgcataatatatgtaagg 6459940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 10010439 - 10010398
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatg 411  Q
    |||||||||||||||||||||| |||| ||||||| ||||||    
T  10010439 tgtgagtttaactcagttgataaggatgttgcatattatatg 10010398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 21052618 - 21052573
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||| |||||||| |||||||| | ||||||||||||||||    
T  21052618 gtgagtttagctcagttggtatggataatacataatatatgcaagg 21052573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 30135139 - 30135180
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatg 411  Q
    |||||| ||||||||||||||| ||||| |||||||||||||    
T  30135139 tgtgagcttaactcagttgataaggataatgcataatatatg 30135180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 32006500 - 32006557
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||| |||||||| || ||||| ||||||||||||| || | |||||||||||    
T  32006500 gtgagtttagctcagttggtagggataatgcataatatatgtaaagttcggggttcaa 32006557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 39171431 - 39171374
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||||||||||||| | ||||||| |||||||||| || ||||||||    
T  39171431 gtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcagggttcaa 39171374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 428
Target Start/End: Complemental strand, 42502873 - 42502808
Alignment:
Q  363 ttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||| ||||||||| ||  || ||||||||||| ||| ||| |||||||| |||||||    
T  42502873 ttgtctatgtgaatttaactcaattagtagggatattgcatcatacatgtaagggtcgtggttcaa 42502808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 43034403 - 43034358
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||||| | ||||||||||||||||||    
T  43034403 gtgagcttaactcagttggtatggacaatgcataatatatgcaagg 43034358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 43374333 - 43374276
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||||||||||||| | ||||||| |||||||||| |||| ||||||    
T  43374333 gtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcggagttcaa 43374276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 422
Target Start/End: Complemental strand, 56479287 - 56479242
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggg 422  Q
    |||||||||||| || |||||||||||| |||||||| ||||||||    
T  56479287 ttaactcagttggtagggatattgcatattatatgcaggggtcggg 56479242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000006; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 7713532 - 7713577
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  7713532 gtgagtttaactcagttgatatgaataatgcataatatatgcaagg 7713577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 16076430 - 16076490
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaatc 430  Q
    |||||| ||||||||| ||||||||| | |||||||||||||||||| || ||||||||||    
T  16076430 tgtgagcttaactcagctgatatggacaatgcataatatatgcaaggttcagggttcaatc 16076490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 546805 - 546860
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| ||||||||||||    
T  546805 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttc 546860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 25604061 - 25604006
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||||||| | |||||||||||||||||| |||||||||    
T  25604061 gtgagcttagctcagttgatatggacagtgcataatatatgcaaggttcggggttc 25604006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 38495148 - 38495199
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||| |||||||| ||||||| |||||||||| |||||||||||    
T  38495148 ttaactcagttggtatggataatgcataaaatatgcaaggttcggggttcaa 38495199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 40361646 - 40361591
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||| || |||||||||||| ||||||||||||| |||||||    
T  40361646 gtgagtttagctcagttggtagggatattgcatattatatgcaagggttggggttc 40361591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 8241054 - 8241108
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||| ||| |||||||| || |||||||||||| |||||||||||||||||||||    
T  8241054 tgagcttagctcagttggtagggatattgcatattatatgcaagggtcggggttc 8241108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 38756733 - 38756787
Alignment:
Q  374 agtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||||||||||||| ||| || ||||||||| ||||| |||||||||||    
T  38756733 agtttaactcagttgatatgaataatgtataatatatacaaggttcggggttcaa 38756787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 10241728 - 10241785
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| |||||||||||| || |||||||||||| |||||||| |||| |||||||||    
T  10241728 gtgagcttaactcagttggtagggatattgcatattatatgcaggggttggggttcaa 10241785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 20258545 - 20258590
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||    
T  20258545 gtgaggttaactcagttggtatggataatgcataatatatgcaagg 20258590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 33736075 - 33736026
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||| || |||||||||||| |||||||| ||||||||||||    
T  33736075 ttaactcagttggtagggatattgcatattatatgcaggggtcggggttc 33736026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 705 - 742
Target Start/End: Complemental strand, 34032175 - 34032138
Alignment:
Q  705 aattattctttaaaaaagttagatatttcaatttcaaa 742  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  34032175 aattattctttaaaaaagttaaatatttcaatttcaaa 34032138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 40445983 - 40446028
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||    
T  40445983 gtgagtttaactcagttgataaggacaatgcataatatatgcaagg 40446028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 4238376 - 4238320
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||  ||||||| ||||||||||||||| |||||||| ||| ||||||||    
T  4238376 tgtgagtttagttcagttggtatggatattgcatattatatgcaggggccggggttc 4238320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 22229030 - 22228974
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||| |||||||| ||||||||||||||  |||||||| ||||||| ||||    
T  22229030 tgtgagtttagctcagttggtatggatattgcatgttatatgcaggggtcggagttc 22228974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 2362972 - 2363027
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| |||| |||||||    
T  2362972 gtgagcttaactcagttggtagggatattgcatattatatgcaggggttggggttc 2363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 416
Target Start/End: Original strand, 5614771 - 5614810
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  5614771 ttaactcagttgatatggataatgcataatatatgtaagg 5614810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 6414071 - 6414125
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| ||||||| |||||||||||||    
T  6414071 gtgagcttaactcagttggtagggatattgcatattatatgc-agggtcggggttc 6414125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 11637633 - 11637578
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| |||||| | ||||||| |||||||||| |||||||||    
T  11637633 gtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttc 11637578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 12672302 - 12672259
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaa 414  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||    
T  12672302 gtgagtttaactaagttgataaggataatgcataatatatgcaa 12672259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 15241399 - 15241454
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||| | |||||||||| |||||||| ||||||||||||    
T  15241399 gtgagcttagctcagttgataggaatattgcatattatatgcaggggtcggggttc 15241454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 18872667 - 18872722
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||| ||| |||||| | |||||||||||||||||| |||||||||    
T  18872667 gtgagcttaactcacttgttatggaaaatgcataatatatgcaaggttcggggttc 18872722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 428
Target Start/End: Complemental strand, 28758491 - 28758428
Alignment:
Q  365 gtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||| ||||| ||||||| || ||| |||||||||| |||||| | ||||||||||||    
T  28758491 gtctatgtgactttaattcagttggtagggacattgcataatttatgcaggagtcggggttcaa 28758428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 29695021 - 29695072
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||||| | ||||||||||||| |||| ||| |||||||    
T  29695021 ttaactcagttgatatggacaatgcataatatatgtaaggttcgtggttcaa 29695072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 36124402 - 36124457
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| ||||||||||| | |||||||||| |||||||| ||||||||||||    
T  36124402 gtgagcttagctcagttgataggaatattgcatattatatgcaggggtcggggttc 36124457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 700 - 738
Target Start/End: Complemental strand, 3167000 - 3166962
Alignment:
Q  700 taaaaaattattctttaaaaaagttagatatttcaattt 738  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  3167000 taaaaaattattatttaaaaaagttagaaatttcaattt 3166962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 11720893 - 11720950
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| |||||||||||| || ||| | |||||||||||||||| |||||||||||||    
T  11720893 tgtgagcttaactcagttggtagggacaatgcataatatatgcaa-ggtcggggttcaa 11720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 17175117 - 17175063
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||||||||| || |||||||||||  |||||||| ||| ||||||||    
T  17175117 tgagtttaactcagttggtagggatattgcatgttatatgcaggggccggggttc 17175063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 38097279 - 38097317
Alignment:
Q  375 gtttaactcagttgatatggatattgcataatatatgca 413  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  38097279 gtttaactcagttggtatggatattgcatattatatgca 38097317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 2839798 - 2839855
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| | |||||| |||||||||||| ||||| |||||||||||    
T  2839798 gtgagcttagctcagttggtttggataatgcataatatatccaaggttcggggttcaa 2839855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 3671218 - 3671263
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||| ||||| || |||||||||||||||    
T  3671218 gtgagcttaactcagttgataaggataatgtataatatatgcaagg 3671263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 5107306 - 5107261
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||| ||| ||||||||||||||||||    
T  5107306 gtgagcttaactcagttggtatgaataatgcataatatatgcaagg 5107261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 8545050 - 8545005
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||| ||| | ||||||||||||||||||    
T  8545050 gtgagcttaactcagttgataaggacaatgcataatatatgcaagg 8545005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 11017176 - 11017221
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||| |||||||| || ||||| ||||||||||||||||||    
T  11017176 gtgagtttagctcagttggtagggataatgcataatatatgcaagg 11017221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 700 - 753
Target Start/End: Original strand, 22873487 - 22873540
Alignment:
Q  700 taaaaaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    |||| ||||||||||||||||||||| |||||| |||||  |||||||| ||||    
T  22873487 taaagaattattctttaaaaaagttaaatattttaatttttaatgcattgaata 22873540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 27679498 - 27679555
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| ||  |||| |||||||||||||||||| |||||||||||    
T  27679498 gtgagcttagctcagttggtaaagataatgcataatatatgcaaggttcggggttcaa 27679555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 27903113 - 27903170
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||||||  ||||||| |||| | | |||||||||||||||||| |||||||||||    
T  27903113 gtgagtttagttcagttggtatgaacaatgcataatatatgcaaggttcggggttcaa 27903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 34206227 - 34206280
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggt 424  Q
    |||||||||||||||||| ||  || | |||||||||||||||||| |||||||    
T  34206227 gtgagtttaactcagttggtaaagacaatgcataatatatgcaaggttcggggt 34206280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 34436851 - 34436908
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| || ||| | ||||||||||||||||||| ||||||||||    
T  34436851 gtgagcttagctcagttggtagggacaatgcataatatatgcaagggccggggttcaa 34436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 36623235 - 36623190
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||| | ||| ||||||||||||||||||    
T  36623235 gtgagcttaactcagttgataagaataatgcataatatatgcaagg 36623190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 40716010 - 40715953
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||| |||||||||| | ||||||||||||||||||  ||||||||||    
T  40716010 gtgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaa 40715953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 41651000 - 41650955
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| |||||||||||| |||||| | ||||||||||||||||||    
T  41651000 gtgagcttaactcagttggtatggacaatgcataatatatgcaagg 41650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 53432805 - 53432749
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||||||||||||| || |||||||||||| |||||||| ||| ||||||||    
T  53432805 tgtgagtttaactcagttggtagggatattgcatattatatgcaggggccggggttc 53432749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 369 - 428
Target Start/End: Complemental strand, 16663299 - 16663240
Alignment:
Q  369 atgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||| ||| |||||||| |||||||| ||||||||||||||||||  ||||||||||    
T  16663299 atgtgagattatctcagttggtatggataatgcataatatatgcaaggtccggggttcaa 16663240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 40963778 - 40963723
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||||||||||||||| |||||||||||  |||||||| ||||||||||||    
T  40963778 gtgagcttaactcagttgataaggatattgcattttatatgcaggggtcggggttc 40963723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 552173 - 552219
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||    
T  552173 tgtgagcttaactcagttggtagggatattgcataatatatgcaagg 552219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 19468442 - 19468496
Alignment:
Q  362 tttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||| |||||| |||||||||||| |||||| | ||||||||||||||||||    
T  19468442 tttgtctttgtgagcttaactcagttggtatggacaatgcataatatatgcaagg 19468496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 38131021 - 38130963
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| |||||||||||| |||||| | ||||||||||||||||||  ||||||||||    
T  38131021 tgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaa 38130963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 4200646 - 4200597
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||||||| || |||||||||||| |||||||| ||||||||||||    
T  4200646 ttaactcagttggtagggatattgcatattatatgcaggggtcggggttc 4200597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 7827508 - 7827553
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||    
T  7827508 gtgagtttaactcagttgatatggacaatgcataatatatgtaagg 7827553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 7829896 - 7829941
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||    
T  7829896 gtgagtttaactcagttgatatggacaatgcataatatatgtaagg 7829941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 12976663 - 12976618
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||    
T  12976663 gtgagtttaactcagttgatagggacaatgcataatatatgcaagg 12976618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 47099096 - 47099039
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| ||||||||||| | ||| |||||||||||||||||| |||||||||||    
T  47099096 gtgagcttagctcagttgataagaataatgcataatatatgcaaggttcggggttcaa 47099039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 422
Target Start/End: Complemental strand, 52992120 - 52992075
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggg 422  Q
    |||||||||||| || |||||||||||||| |||||||||||||||    
T  52992120 ttaactcagttggtagggatattgcataatttatgcaagggtcggg 52992075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 17218492 - 17218548
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||| ||| |||||||| || |||||||||||| |||||||||||| ||||||||||    
T  17218492 tgagcttagctcagttggtagggatattgcatattatatgcaagggccggggttcaa 17218548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 23653292 - 23653228
Alignment:
Q  362 tttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||| | ||||| |||||||||||| || | | ||||||||||||||||| ||||||||||||    
T  23653292 tttgtccacgtgagcttaactcagttggtaagaacattgcataatatatgcaggggtcggggttc 23653228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 35126330 - 35126286
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaag 415  Q
    |||||||||||||||||| || ||||| |||||||||||||||||    
T  35126330 gtgagtttaactcagttggtagggataatgcataatatatgcaag 35126286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 51772891 - 51772947
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||| |||||| ||||| || |||||||||||| |||||||| ||||||||||||    
T  51772891 tgtgagcttaacttagttggtagggatattgcatattatatgcaggggtcggggttc 51772947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 52984012 - 52984068
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||| ||| |||||||| || |||||||||||| | |||||||||||||||||||    
T  52984012 tgtgagcttagctcagttggtagggatattgcatattgtatgcaagggtcggggttc 52984068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 4227811 - 4227756
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||| || ||| |||||||||| |||||| ||||||||||||    
T  4227811 gtgagtttagctcagttggtagggacattgcataatttatgcaggggtcggggttc 4227756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 416
Target Start/End: Original strand, 21160058 - 21160097
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  21160058 ttaactcagttgatatggataatgcataatatatgtaagg 21160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 21331478 - 21331423
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| |||||| | |||||||||||||||||| |||||||||    
T  21331478 gtgagcttagctcagttgttatggacaatgcataatatatgcaaggttcggggttc 21331423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29373516 - 29373461
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| ||| ||||||||    
T  29373516 gtgagcttaactcagttggtaaggatattgcatattatatgcaggggccggggttc 29373461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 30779634 - 30779579
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  30779634 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 30779579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 34847546 - 34847601
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||| ||||||| || |||||||||||| |||||||| ||||||||||||    
T  34847546 gtgagcttaattcagttggtagggatattgcatattatatgcaggggtcggggttc 34847601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 37921059 - 37921016
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaa 414  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||    
T  37921059 gtgagtttagctcagttgatagggataatgcataatatatgcaa 37921016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 39719938 - 39719993
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||| || |||||||||||| |||||||| ||| ||||||||    
T  39719938 gtgagtttagctcagttggtagggatattgcatattatatgcaggggccggggttc 39719993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 45871020 - 45871075
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||||||| |||||||| || |||||||| ||| |||||||| ||||||||||||    
T  45871020 gtgagtttagctcagttggtagggatattgtatattatatgcaggggtcggggttc 45871075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 52309177 - 52309122
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| |||||||||||| || |||||||||||| |||||||| | ||||||||||    
T  52309177 gtgagcttaactcagttggtagggatattgcatactatatgcaggagtcggggttc 52309122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 52945898 - 52945953
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    ||||| ||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  52945898 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttc 52945953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 27397682 - 27397628
Alignment:
Q  362 tttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||| | |||||||||||||||||| |||||| | || |||||||||||||||    
T  27397682 tttgtccacgtgagtttaactcagttggtatggacaatgtataatatatgcaagg 27397628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 28093354 - 28093400
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaaggg 417  Q
    |||||||||| ||||||| |||||| | |||||||||||||||||||    
T  28093354 gtgagtttaattcagttggtatggacaatgcataatatatgcaaggg 28093400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 28396848 - 28396794
Alignment:
Q  372 tgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||| |||||||||||| || |||||||||||  |||||||| ||||||||||||    
T  28396848 tgagcttaactcagttggtagggatattgcatgttatatgcaggggtcggggttc 28396794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 36834773 - 36834715
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| ||| ||||| ||||| |||||||| ||| |||||||| ||||||||||||||    
T  36834773 tgtgagcttagctcagctgatagggatattgtatattatatgcaggggtcggggttcaa 36834715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 44364024 - 44364066
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgca 413  Q
    |||||||||||||||||| || |||||||||||| ||||||||    
T  44364024 gtgagtttaactcagttggtagggatattgcatattatatgca 44364066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 7824807 - 7824852
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||||||| || | | ||||||||||||||||    
T  7824807 gtgagtttaactcagttgatatagacaatacataatatatgcaagg 7824852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 11574253 - 11574298
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||| ||||||||||||||| ||||| |||||||||||| |||||    
T  11574253 gtgagcttaactcagttgataaggataatgcataatatatacaagg 11574298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 39779024 - 39779081
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| || ||| |||| |||||| | |||||||||||||||||| |||||||||||    
T  39779024 gtgagtatagctcggttggtatggacaatgcataatatatgcaaggttcggggttcaa 39779081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 48315085 - 48315028
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| || ||||| ||||||||||||||||||  ||||||||||    
T  48315085 gtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttcaa 48315028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 48517671 - 48517728
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||||||||||||||||||| | | | |||||||||||| ||||| |||| ||||||    
T  48517671 gtgagtttaactcagttgataggaacaatgcataatatatacaaggttcggagttcaa 48517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 50037311 - 50037368
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    ||||| ||| |||||||| |||||| | |||||||| ||||||||| |||||||||||    
T  50037311 gtgagcttagctcagttggtatggacaatgcataatgtatgcaaggttcggggttcaa 50037368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 161140 - 161198
Alignment:
Q  370 tgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttcaa 428  Q
    |||||| |||||||||||| |||||| | ||||||| |||||||||| |||||||||||    
T  161140 tgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcaa 161198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 416
Target Start/End: Original strand, 48021 - 48066
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  48021 gtgagtttaactcagttgataagcataatgcataatatatgcaagg 48066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 708 - 753
Target Start/End: Complemental strand, 20330 - 20285
Alignment:
Q  708 tattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    |||||||| |||||||||  |||| |||||||||||||||||||||    
T  20330 tattcttttaaaaagttaactattacaatttcaaatgcattaaata 20285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 14247 - 14202
Alignment:
Q  371 gtgagtttaactcagttgatatggatattgcataatatatgcaagg 416  Q
    |||||||||||||||||| |||| | | ||||||||||||||||||    
T  14247 gtgagtttaactcagttggtatgaacaatgcataatatatgcaagg 14202  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 422
Target Start/End: Complemental strand, 42987 - 42942
Alignment:
Q  377 ttaactcagttgatatggatattgcataatatatgcaagggtcggg 422  Q
    ||||||||||||||| | ||| |||||||||||||||||| |||||    
T  42987 ttaactcagttgataagaataatgcataatatatgcaaggttcggg 42942  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 17494 - 17559
Alignment:
Q  361 gtttgtctatgtgagtttaactcagttgatatggatattgcataatatatgcaagggtcggggttc 426  Q
    |||||||  |||||||||| ||||| ||| ||||| | |||||||||||||||||| | |||||||    
T  17494 gtttgtccttgtgagtttagctcagctgacatggacaatgcataatatatgcaaggtttggggttc 17559  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 753
Target Start/End: Original strand, 219210 - 219259
Alignment:
Q  704 aaattattctttaaaaaagttagatatttcaatttcaaatgcattaaata 753  Q
    ||||||||||||| |||||| | ||| ||||||||| |||||||||||||    
T  219210 aaattattctttacaaaagtcaaatagttcaatttccaatgcattaaata 219259  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 705 - 750
Target Start/End: Original strand, 189090 - 189135
Alignment:
Q  705 aattattctttaaaaaagttagatatttcaatttcaaatgcattaa 750  Q
    ||||||||||||||||||||| ||||||| ||||| ||| ||||||    
T  189090 aattattctttaaaaaagttaaatatttctatttctaatacattaa 189135  T

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