View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5540-Insertion-12 (Length: 512)
Name: NF5540-Insertion-12
Description: NF5540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5540-Insertion-12 |
 |  |
|
| [»] scaffold0038 (5 HSPs) |
 |  |  |
|
| [»] scaffold0019 (1 HSPs) |
 |  |  |
|
| [»] scaffold1870 (1 HSPs) |
 |  |  |
|
| [»] scaffold0277 (3 HSPs) |
 |  |  |
|
| [»] scaffold0419 (1 HSPs) |
 |  |  |
|
| [»] scaffold0349 (1 HSPs) |
 |  |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0038 (Bit Score: 460; Significance: 0; HSPs: 5)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 12 - 511
Target Start/End: Complemental strand, 44495 - 43996
Alignment:
| Q |
12 |
acctgtcgatctttttgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaa |
111 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
44495 |
acctgttgatctttatgagagatttttcatccaacacactgatttgatatttcatgcagttaccataatgagcataaagtatatcttcaagttctttcaa |
44396 |
T |
 |
| Q |
112 |
tttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatcttttta |
211 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44395 |
attatatcctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatcttttta |
44296 |
T |
 |
| Q |
212 |
atcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccag |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44295 |
atcggaatccttctataccgatctaatgcagatttccattctcctatattatttccaaataagtttgaacccactacttctaaagccaatggaaggccag |
44196 |
T |
 |
| Q |
312 |
aagcataagttactgcacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctc |
411 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44195 |
aagcataagttactgcacaccgtaaaacaccatcgaaatttgaatccaccttgttatttttgaaagaattccacctcaacaattcaagagcttcggtctc |
44096 |
T |
 |
| Q |
412 |
atttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44095 |
atttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
43996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 167 - 511
Target Start/End: Complemental strand, 28833 - 28489
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| || |||||||| ||||||||| | | ||| ||||||||||||||||||| | |||||||| | |
|
|
| T |
28833 |
tccaaagtatcaaagcttattttaagtatctctatgatatttttaatgggaatcctttcttcctgatttaatgcagatttccattcttcaatattcttcc |
28734 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcacaacgtaaaacaccatcgaaatttgaatccatcttatt |
366 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||| |||| ||| | ||||||||||||| || ||||||| |||||||||||||| | | | || |
|
|
| T |
28733 |
caaacaagtttgaacccactacttctaaaaccaatggaatgccaaaagaaaaagttactgcacaccgcaaaacacggtcgaaatttgaatcgaccatgtt |
28634 |
T |
 |
| Q |
367 |
atttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgt |
466 |
Q |
| |
|
|| |||||||| |||||||||| |||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
28633 |
atatttgaaagcgttccacctcatcaattcaagagcttcgttctcatttaacttatctatttcatatgctctttcaatcccatgacttgctagcaattgt |
28534 |
T |
 |
| Q |
467 |
ctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||| ||||||||||| ||||||| |||| |||||||| |||||| |
|
|
| T |
28533 |
ttgtttcgagtggtaatgatcactttacttccaggaccaaaccaa |
28489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 313 - 511
Target Start/End: Complemental strand, 35964 - 35766
Alignment:
| Q |
313 |
agcataagttactgcacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctca |
412 |
Q |
| |
|
|||||||||||||||||| | |||||||| | |||||||||||| | ||| |||| ||| |||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
35964 |
agcataagttactgcacacctcaaaacaccgttgaaatttgaatcgaccttgttatattttaaagccttccacctcaacaattcaagagcttcgttctca |
35865 |
T |
 |
| Q |
413 |
tttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||||||| || ||| || | ||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||| |||| |||||||| |||||| |
|
|
| T |
35864 |
tttaacttatctatttcgtacgttctttcaatcccatgacttgctagcaattgtttgtctcgagtggtaatgatcactttacttccaggaccaaaccaa |
35766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 330
Target Start/End: Complemental strand, 40940 - 40739
Alignment:
| Q |
125 |
aagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttc |
224 |
Q |
| |
|
||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| || |||| |||| | ||||||||| |
|
|
| T |
40940 |
aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatcaaa----actttaagtatcttttggatctctttatttggaatccttt |
40845 |
T |
 |
| Q |
225 |
tataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttac |
324 |
Q |
| |
|
|||| | ||||||| |||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
40844 |
catactggtctaatgtggattcccattctcctatatctaatccaaacaagttggaaccaactacttctaaagctaatggtaggccagaagcataagttat |
40745 |
T |
 |
| Q |
325 |
tgcaca |
330 |
Q |
| |
|
|||||| |
|
|
| T |
40744 |
tgcaca |
40739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 28953 - 28897
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgt-atctttttaatcggaatcctt |
223 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||| || |||||||| ||||||||| |
|
|
| T |
28953 |
tccaaagcatcaaagcttattttaagtatct-ctgtgatatttttaatgggaatcctt |
28897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 460; Significance: 0; HSPs: 69)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 12 - 511
Target Start/End: Complemental strand, 28244333 - 28243834
Alignment:
| Q |
12 |
acctgtcgatctttttgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaa |
111 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
28244333 |
acctgttgatctttatgagagatttttcatccaacacactgatttgatatttcatgcagttaccataatgagcataaagtatatcttcaagttctttcaa |
28244234 |
T |
 |
| Q |
112 |
tttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatcttttta |
211 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28244233 |
attatatcctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatcttttta |
28244134 |
T |
 |
| Q |
212 |
atcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccag |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28244133 |
atcggaatccttctataccgatctaatgcagatttccattctcctatattatttccaaataagtttgaacccactacttctaaagccaatggaaggccag |
28244034 |
T |
 |
| Q |
312 |
aagcataagttactgcacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctc |
411 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28244033 |
aagcataagttactgcacaccgtaaaacaccatcgaaatttgaatccaccttgttatttttgaaagaattccacctcaacaattcaagagcttcggtctc |
28243934 |
T |
 |
| Q |
412 |
atttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28243933 |
atttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
28243834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 27 - 511
Target Start/End: Complemental strand, 28327001 - 28326517
Alignment:
| Q |
27 |
tgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaa |
126 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
28327001 |
tgagagatttttcaagcaacacactgatttgatacttcatggagttaccataatgagcatgaagtatatcttcaagttctttcaattcatatccattgaa |
28326902 |
T |
 |
| Q |
127 |
gcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttcta |
226 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||| ||||||||| | |
|
|
| T |
28326901 |
gcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaagcatcaaagcttactttaagtatcgcttggatctttttaatgggaatcctttca |
28326802 |
T |
 |
| Q |
227 |
taccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactg |
326 |
Q |
| |
|
||| ||| |||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28326801 |
tactgatataatgcagatttacattctactatattctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcataagttactg |
28326702 |
T |
 |
| Q |
327 |
cacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaa |
426 |
Q |
| |
|
|||| ||||| || || ||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||| | |
|
|
| T |
28326701 |
cacagtataaaatgccgtcaaaatttgaatcgactttgttatttttgaaagtattccacctcaacaattcaagagcttctctcttaattaacttaggaat |
28326602 |
T |
 |
| Q |
427 |
ttcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
28326601 |
ttcatatgctctttcaatcccgtgactttttagcaaatgtttgtctcgagtggtaacgatcactctactgccaggaccgaaccaa |
28326517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 27 - 511
Target Start/End: Complemental strand, 28504637 - 28504153
Alignment:
| Q |
27 |
tgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaa |
126 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
28504637 |
tgagagatttttcaagcaacacactgatttgatacttcatggagttaccataatgagcatgaagtatatcttcaagttctttcaattcatatccattgaa |
28504538 |
T |
 |
| Q |
127 |
gcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttcta |
226 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||| ||||||||| | |
|
|
| T |
28504537 |
gcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaagcatcaaagcttactttaagtatcgcttggatctttttaatgggaatcctttca |
28504438 |
T |
 |
| Q |
227 |
taccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactg |
326 |
Q |
| |
|
||| ||| |||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28504437 |
tactgatataatgcagatttacattctactatattctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcataagttactg |
28504338 |
T |
 |
| Q |
327 |
cacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaa |
426 |
Q |
| |
|
|||| ||||| || || ||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||| | |
|
|
| T |
28504337 |
cacagtataaaatgccgtcaaaatttgaatcgactttgttatttttgaaagtattccacctcaacaattcaagagcttctctcttaattaacttaggaat |
28504238 |
T |
 |
| Q |
427 |
ttcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
28504237 |
ttcatatgctctttcaatcccgtgactttttagcaaatgtttgtctcgagtggtaacgatcactctactgccaggaccgaaccaa |
28504153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 43 - 511
Target Start/End: Complemental strand, 28186901 - 28186433
Alignment:
| Q |
43 |
caacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcg |
142 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
28186901 |
caacactctgatttgatatttcatgcagttaccataatgagcatgaagtacatcttcaagttctttcaattcatatcctttgaagcagcaagcgatgtcg |
28186802 |
T |
 |
| Q |
143 |
agaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcag |
242 |
Q |
| |
|
||||||||||| || || ||| | |||||||||||||||||||||| |||||||| || ||||||||| ||||||||| |||| ||| |||||||| |
|
|
| T |
28186801 |
agaaaaacattttgttctgcttcccccaaagcatcaaagcttactttgagtatctcttggatctttttatcgggaatcctttcatactgatttaatgcag |
28186702 |
T |
 |
| Q |
243 |
atttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcacaacgtaaaacacc |
342 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
28186701 |
atttccattctcctatattctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcataagttactgcatggtgtaaaacgct |
28186602 |
T |
 |
| Q |
343 |
atcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaattcatatgctctttca |
442 |
Q |
| |
|
|||||||||| ||| | || |||||||| |||| |||||| ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |
|
|
| T |
28186601 |
gtcgaaatttgtatcaactttgttattttttaaagccttccacgtcaacaattcaagagcttctttctcatttaacttatgtaatttatatgctctttca |
28186502 |
T |
 |
| Q |
443 |
atcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
28186501 |
atcccatgatgagctagcaattgtttgtctcgagtggtaatgatcacaatactaccaggaccaaaccaa |
28186433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 511
Target Start/End: Original strand, 28296391 - 28296883
Alignment:
| Q |
19 |
gatctttttgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatat |
118 |
Q |
| |
|
||||||| |||||||||| |||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
28296391 |
gatctttatgagagatttgtcatgcaacactctgatttgataattcatgcagttaccataatgagcatgaagtatattttcaagttctttcaattcatat |
28296490 |
T |
 |
| Q |
119 |
cctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaa |
218 |
Q |
| |
|
||||||||||||||| | ||||| ||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||| || |
|
|
| T |
28296491 |
cctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaagcatcaaagcttactttaagtatctcttggatctttctaatgggtc |
28296590 |
T |
 |
| Q |
219 |
tccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||| |||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28296591 |
tcctttcatactgacttaatgcagatttccattctcttatattctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcata |
28296690 |
T |
 |
| Q |
319 |
agttactgcacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaac |
418 |
Q |
| |
|
|||||| || |||||| | || ||||||| ||| | || ||||||||||||| |||||| |||||||||||||||||||| | ||||||||| |
|
|
| T |
28296691 |
agttacagcctggtgtaaaatgtcgtcaaaatttgtatcgactttgttatttttgaaagcattccatctcaacaattcaagagcttctttgtcatttaac |
28296790 |
T |
 |
| Q |
419 |
ttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||| | |||||| | | | ||| ||||||||| ||||||| |||| ||| |||| |||||| |
|
|
| T |
28296791 |
ttatgtatttcatatgctctttcaatcccatgaccatctagcaattttttttcttgagtggtaatgatcactttacttccaagaccaaaccaa |
28296883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 511
Target Start/End: Complemental strand, 28515682 - 28515190
Alignment:
| Q |
19 |
gatctttttgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatat |
118 |
Q |
| |
|
||||||| |||||||||| |||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
28515682 |
gatctttatgagagatttgtcatgcaacactctgatttgataattcatgcagttaccataatgagcatgaagtatattttcaagttctttcaattcatat |
28515583 |
T |
 |
| Q |
119 |
cctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaa |
218 |
Q |
| |
|
||||||||||||||| | ||||| ||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||| || |
|
|
| T |
28515582 |
cctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaagcatcaaagcttactttaagtatctcttggatctttctaatgggtc |
28515483 |
T |
 |
| Q |
219 |
tccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||| |||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28515482 |
tcctttcatactgacttaatgcagatttccattctcttatattctttccaaacaagttggaacccactacttctaaagccaatggaaggccagaagcata |
28515383 |
T |
 |
| Q |
319 |
agttactgcacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaac |
418 |
Q |
| |
|
|||||| || |||||| | || ||||||| ||| | || ||||||||||||| |||||| |||||||||||||||||||| | ||||||||| |
|
|
| T |
28515382 |
agttacagcctggtgtaaaatgtcgtcaaaatttgtatcgactttgttatttttgaaagcattccatctcaacaattcaagagcttctttgtcatttaac |
28515283 |
T |
 |
| Q |
419 |
ttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||| | |||||| | | | ||| ||||||||| ||||||| |||| ||| |||| |||||| |
|
|
| T |
28515282 |
ttatgtatttcatatgctctttcaatcccatgaccatctagcaattttttttcttgagtggtaatgatcactttacttccaagaccaaaccaa |
28515190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 53 - 511
Target Start/End: Complemental strand, 28182606 - 28182157
Alignment:
| Q |
53 |
atttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacat |
152 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||| ||||||||||| ||||||||| | ||||||||| ||| | ||| |||||| |||||||||| |
|
|
| T |
28182606 |
atttgatgtttcatgcagctaccataatgagcatgaaatatatcttcaacttctttcaaatcatatccttttaagaaacaagaaatgtccagaaaaacat |
28182507 |
T |
 |
| Q |
153 |
tctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattc |
252 |
Q |
| |
|
|||||||||| | ||||| ||||||| |||| |||||||||||||| || |||||||| || ||||||||| | ||||||||||||| |||| |
|
|
| T |
28182506 |
tctgctcatcatcctccagagcatcatagctaactttaagtatctcttggatctttttcatgggaatccttgt---------taatgcagatttcgattc |
28182416 |
T |
 |
| Q |
253 |
tcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcacaacgtaaaacaccatcgaaattt |
352 |
Q |
| |
|
|| |||||||||||||| ||||| |||||||||||||||||||||||||||||| | || ||| |||||||||| |||||| | || ||||| |
|
|
| T |
28182415 |
tctcatattctttccaaacaagttggaacccactacttctaaagccaatggaaggactgatgcaaaagttactgcttggtgtaaaatgacgtcaaaattc |
28182316 |
T |
 |
| Q |
353 |
gaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaattcatatgctctttcaatcccatgac |
452 |
Q |
| |
|
| ||| | || ||| ||||||||| | |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
28182315 |
gcatcaactttgttaattttgaaagcagaccacctcaacaattcaagagcttctttctcatttaacttatctatttcatatgctctttcaatcccatgac |
28182216 |
T |
 |
| Q |
453 |
tttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||||| ||||||||||||| |||||| |
|
|
| T |
28182215 |
ctactagcaattgttcgtctcgagtggtaatgatcactttactaccaggaccaaaccaa |
28182157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 167 - 511
Target Start/End: Complemental strand, 28228335 - 28227991
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| || |||||||| ||||||||| | | ||| ||||||||||||||||||| | |||||||| | |
|
|
| T |
28228335 |
tccaaagtatcaaagcttattttaagtatctctatgatatttttaatgggaatcctttcttcctgatttaatgcagatttccattcttcaatattcttcc |
28228236 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcacaacgtaaaacaccatcgaaatttgaatccatcttatt |
366 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||| |||| ||| | ||||||||||||| || ||||||| |||||||||||||| | | | || |
|
|
| T |
28228235 |
caaacaagtttgaacccactacttctaaaaccaatggaatgccaaaagaaaaagttactgcacaccgcaaaacacggtcgaaatttgaatcgaccatgtt |
28228136 |
T |
 |
| Q |
367 |
atttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgt |
466 |
Q |
| |
|
|| |||||||| |||||||||| |||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
28228135 |
atatttgaaagcgttccacctcatcaattcaagagcttcgttctcatttaacttatctatttcatatgctctttcaatcccatgacttgctagcaattgt |
28228036 |
T |
 |
| Q |
467 |
ctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||| ||||||||||| ||||||| |||| |||||||| |||||| |
|
|
| T |
28228035 |
ttgtttcgagtggtaatgatcactttacttccaggaccaaaccaa |
28227991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 43 - 329
Target Start/End: Complemental strand, 28141042 - 28140756
Alignment:
| Q |
43 |
caacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcg |
142 |
Q |
| |
|
|||||| || || |||||||||||||| | ||| |||| ||||| || |||||||||| ||| ||| |||||||| |||| || ||| |||||||| |
|
|
| T |
28141042 |
caacactctaatatgatatttcatgcattcaccgtaatgagcatagagaatatcttcaacctctgctaatatatatcctctgaaacaacaagcaatgtcg |
28140943 |
T |
 |
| Q |
143 |
agaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcag |
242 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||||||||| ||||||||||||| | | | || |||| ||||||||| |||||||||||||| || |
|
|
| T |
28140942 |
agaaaaacactttgctcatctttctccaaactatcaaagctcactttaagtatcttcaggacctctttatgaggaatcctttcataccgatctaatgtag |
28140843 |
T |
 |
| Q |
243 |
atttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcac |
329 |
Q |
| |
|
||||||| || || ||| ||||||||| ||| | ||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
28140842 |
atttccactcatctttatgctttccaaacaagctagaaccaactacttctaaagccaatggaaggccagaggcataagtaactgcac |
28140756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 313 - 511
Target Start/End: Complemental strand, 28235802 - 28235604
Alignment:
| Q |
313 |
agcataagttactgcacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctca |
412 |
Q |
| |
|
|||||||||||||||||| | |||||||| | |||||||||||| | ||| |||| ||| |||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
28235802 |
agcataagttactgcacacctcaaaacaccgttgaaatttgaatcgaccttgttatattttaaagccttccacctcaacaattcaagagcttcgttctca |
28235703 |
T |
 |
| Q |
413 |
tttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||||||| || ||| || | ||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||| |||| |||||||| |||||| |
|
|
| T |
28235702 |
tttaacttatctatttcgtacgttctttcaatcccatgacttgctagcaattgtttgtctcgagtggtaatgatcactttacttccaggaccaaaccaa |
28235604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 20 - 329
Target Start/End: Original strand, 29842644 - 29842953
Alignment:
| Q |
20 |
atctttttgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatc |
119 |
Q |
| |
|
|||||| |||||| |||||| ||||||| | || ||||||| ||||| | ||||| || |||| ||| |||||||||| ||| ||| | ||| | |
|
|
| T |
29842644 |
atctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcatacc |
29842743 |
T |
 |
| Q |
120 |
ctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaat |
219 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| || || |||| |||||||||||||||||||| ||||||||| | || |||| |||| | ||||| |
|
|
| T |
29842744 |
ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat |
29842843 |
T |
 |
| Q |
220 |
ccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataa |
319 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||||| |||||||||||||||| || || ||| |||| ||||||| |||| |||||||||||||||||| |
|
|
| T |
29842844 |
cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcataa |
29842943 |
T |
 |
| Q |
320 |
gttactgcac |
329 |
Q |
| |
|
| || ||||| |
|
|
| T |
29842944 |
gctattgcac |
29842953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 330
Target Start/End: Complemental strand, 28240778 - 28240577
Alignment:
| Q |
125 |
aagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttc |
224 |
Q |
| |
|
||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| || |||| |||| | ||||||||| |
|
|
| T |
28240778 |
aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatcaaa----actttaagtatcttttggatctctttatttggaatccttt |
28240683 |
T |
 |
| Q |
225 |
tataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttac |
324 |
Q |
| |
|
|||| | ||||||| |||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
28240682 |
catactggtctaatgtggattcccattctcctatatctaatccaaacaagttggaaccaactacttctaaagctaatggtaggccagaagcataagttat |
28240583 |
T |
 |
| Q |
325 |
tgcaca |
330 |
Q |
| |
|
|||||| |
|
|
| T |
28240582 |
tgcaca |
28240577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 87 - 318
Target Start/End: Complemental strand, 26647942 - 26647711
Alignment:
| Q |
87 |
gaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttac |
186 |
Q |
| |
|
||||||||||||||| || | | || || ||||||||||||| ||| ||||||| ||||| ||| |||||| |||| ||||||||||||| ||||||| |
|
|
| T |
26647942 |
gaagtatatcttcaaactcctcccatctacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttac |
26647843 |
T |
 |
| Q |
187 |
tttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccact |
286 |
Q |
| |
|
|||||||||||| || ||||||||| | |||||| || ||| | |||||||| | ||||||||| |||| |||||||| ||||||| ||||||||| |
|
|
| T |
26647842 |
tttaagtatctcgtggatctttttattgggaatcttttcatatccatctaatgtacccttccattcttctatgctctttccatataagttggaacccact |
26647743 |
T |
 |
| Q |
287 |
acttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
| ||||||| | || |||||||| |||||||| |
|
|
| T |
26647742 |
atttctaaaactaagggaaggcctgaagcata |
26647711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 87 - 318
Target Start/End: Complemental strand, 26753910 - 26753679
Alignment:
| Q |
87 |
gaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttac |
186 |
Q |
| |
|
||||||||||||||| || | | || || ||||||||||||| ||| ||||||| ||||| ||| |||||| |||| ||||||||||||| ||||||| |
|
|
| T |
26753910 |
gaagtatatcttcaaactcctcccatctacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttac |
26753811 |
T |
 |
| Q |
187 |
tttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccact |
286 |
Q |
| |
|
|||||||||||| || ||||||||| | |||||| || ||| | |||||||| | ||||||||| |||| |||||||| ||||||| ||||||||| |
|
|
| T |
26753810 |
tttaagtatctcgtggatctttttattgggaatcttttcatatccatctaatgtacccttccattcttctatgctctttccatataagttggaacccact |
26753711 |
T |
 |
| Q |
287 |
acttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
| ||||||| | || |||||||| |||||||| |
|
|
| T |
26753710 |
atttctaaaactaagggaaggcctgaagcata |
26753679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 75 - 318
Target Start/End: Original strand, 27704961 - 27705204
Alignment:
| Q |
75 |
cataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagc |
174 |
Q |
| |
|
|||||| || ||||||||||| ||||| ||| ||||| |||| ||||| ||||| ||| ||||||| ||||| ||| ||||||| |||| |||||||| |
|
|
| T |
27704961 |
cataatgagaatgaagtatattttcaacctctgtcaatctatacccttttaagcaacaagcaatgtcaagaaagacactctgctcctcttcttccaaagc |
27705060 |
T |
 |
| Q |
175 |
atcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataag |
274 |
Q |
| |
|
|||| |||| ||| ||||||||| || |||| |||| | |||||||| ||||| |||||||| | ||||||||| |||| ||||| ||||| ||| |
|
|
| T |
27705061 |
atcatagctcactctaagtatcttttggatctctttattgggaatcctgtcatacccatctaatgtattcttccattcttctatgttcttgccaaacaag |
27705160 |
T |
 |
| Q |
275 |
tttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|| ||||||| |||||||||| | || ||||||||||||||||| |
|
|
| T |
27705161 |
ttagaacccattacttctaaaactaacggaaggccagaagcata |
27705204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 119 - 329
Target Start/End: Complemental strand, 29827417 - 29827207
Alignment:
| Q |
119 |
cctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaa |
218 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||| || ||||||| ||||||||||||||| |||| ||||||||| | || |||| |||| | |||| |
|
|
| T |
29827417 |
cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcatcttcctccaaagcatcaaaacttattttaagtatattttggatctctttattaggaa |
29827318 |
T |
 |
| Q |
219 |
tccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||| ||| | ||||||| ||||||||||||| |||||||||||||||| || | ||| |||| ||||||| |||| ||||||||||||||||| |
|
|
| T |
29827317 |
tcctttcatatctatctaatatagatttccattcttctatattctttccaaacaacgcgggacctactaattctaaaaccaacggaaggccagaagcata |
29827218 |
T |
 |
| Q |
319 |
agttactgcac |
329 |
Q |
| |
|
|| || ||||| |
|
|
| T |
29827217 |
agctattgcac |
29827207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 314
Target Start/End: Complemental strand, 31285992 - 31285795
Alignment:
| Q |
117 |
atcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcgg |
216 |
Q |
| |
|
||||||||||||| ||| ||||||| ||||| ||| ||||||| |||| |||||||||||| |||||||||||||||||| || |||| |||| | || |
|
|
| T |
31285992 |
atcctttgaagcaacaagcaatgtccagaaagacactctgctcctcttcttccaaagcatcatagcttactttaagtatcttttggatctctttattggg |
31285893 |
T |
 |
| Q |
217 |
aatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaag |
314 |
Q |
| |
|
|||| | ||||| |||||||| | ||||||| | |||| |||||||||| |||||||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
31285892 |
aatcttgtcatacccatctaatgtactcttccatttttctatgctctttccaaacaagtttgaacccactacttctataactaatggaaggccagaag |
31285795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 75 - 318
Target Start/End: Complemental strand, 27680425 - 27680182
Alignment:
| Q |
75 |
cataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagc |
174 |
Q |
| |
|
|||||| |||| |||||||||||| | || ||| ||| ||||||||||||||||||| | ||||| ||||| ||| ||||||| |||| |||||||| |
|
|
| T |
27680425 |
cataatgagcacaaagtatatcttcgaactccttccattgatatcctttgaagcagcaagcgatgtcaagaaagacactctgctcctcttcttccaaagc |
27680326 |
T |
 |
| Q |
175 |
atcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataag |
274 |
Q |
| |
|
|||| |||| || |||||||||| || |||| |||| | |||||||| ||||| |||||||| | ||||| ||| |||| |||||||||| ||| |
|
|
| T |
27680325 |
atcatagctcaccttaagtatcttttggatctctttattgggaatcctgtcatacccatctaatgtatgcttccaatcttctatgctctttccaaacaag |
27680226 |
T |
 |
| Q |
275 |
tttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|| |||||||||||||||||| | || ||||||||| ||||||| |
|
|
| T |
27680225 |
ttagaacccactacttctaaaactaacggaaggccaaaagcata |
27680182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 74 - 329
Target Start/End: Complemental strand, 28787714 - 28787459
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||| ||||||||||||||| || | | | | | ||||||||||||| || ||||||| ||||||||| | || | |||| |||||||| |
|
|
| T |
28787714 |
ccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaagcaacatgcaatgtctagaaaaacactttgttgctcttcctccaaag |
28787615 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataa |
273 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||||||| | |||||| || ||| | |||||| | | ||||||||| |||| |||||||||| || |
|
|
| T |
28787614 |
catcatagcttactttaagtatctcgtggatctttttattgggaatcttttcatatccatctaaagtacccttccattcttctatcgtctttccaaacaa |
28787515 |
T |
 |
| Q |
274 |
gtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcac |
329 |
Q |
| |
|
||| |||||||||| ||||||| | || |||||||| |||||||||| ||||||| |
|
|
| T |
28787514 |
gttggaacccactatttctaaaactaagggaaggcccgaagcataagaaactgcac |
28787459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 113 - 318
Target Start/End: Original strand, 27609865 - 27610070
Alignment:
| Q |
113 |
ttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaa |
212 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||| ||| | ||||| |||| ||||||| |||| |||| ||||||||||||| || |||| |||| |
|
|
| T |
27609865 |
ttatatcctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttccaaagaatcatagctcactttaagtatcttttggatctctttat |
27609964 |
T |
 |
| Q |
213 |
tcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccaga |
312 |
Q |
| |
|
| |||||||| ||||| |||||||| | | |||||||| |||| ||||||||||| ||||| |||||||||| ||||| | | || ||||||||||| |
|
|
| T |
27609965 |
tgggaatcctgtcatacccatctaatgtatacttccattcctctatgttctttccaaacaagttagaacccactatttctataactaacggaaggccaga |
27610064 |
T |
 |
| Q |
313 |
agcata |
318 |
Q |
| |
|
|||||| |
|
|
| T |
27610065 |
agcata |
27610070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 318
Target Start/End: Complemental strand, 26803922 - 26803678
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| | |||||||||||||||||| || | | || | ||||||||||||| ||| ||||||| ||||| ||| |||||| |||| |||||||| |
|
|
| T |
26803922 |
ccataatgaacatgaagtatatcttcaaactcctcccatccacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaag |
26803823 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataa |
273 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||||||| | |||||| || ||| | |||||||| | ||||||||| ||| |||||||||| || |
|
|
| T |
26803822 |
catcatagcttactttaagtatctcgtggatctttttattgggaatcttttcatatccatctaatgtacccttccattcttttatgctctttccaaacaa |
26803723 |
T |
 |
| Q |
274 |
gtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||| |||||||||| |||||| | || ||||| || |||||||| |
|
|
| T |
26803722 |
gttggaacccactatctctaaaactaagggaagacctgaagcata |
26803678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 318
Target Start/End: Complemental strand, 28793835 - 28793591
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||| ||||||||||||||| || | | | | | ||||||||||||| || ||||||| ||||||||| | || | |||| |||||||| |
|
|
| T |
28793835 |
ccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaagcaacatgcaatgtctagaaaaacactttgttgctcttcctccaaag |
28793736 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataa |
273 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||||||| | |||||| || ||| | |||||| | | ||||||||| |||| |||||||||| || |
|
|
| T |
28793735 |
catcatagcttactttaagtatctcgtggatctttttattgggaatcttttcatatccatctaaagtacccttccattcttctatcgtctttccaaacaa |
28793636 |
T |
 |
| Q |
274 |
gtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||| |||||||||| ||||||| | || |||||||| |||||||| |
|
|
| T |
28793635 |
gttggaacccactatttctaaaactaagggaaggcccgaagcata |
28793591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 511
Target Start/End: Original strand, 28097104 - 28097586
Alignment:
| Q |
29 |
agagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagc |
128 |
Q |
| |
|
|||||||||| | ||||||| | || |||||| |||||| | ||| |||| |||| ||| |||||||| | |||||||||||||| |||||||||| |
|
|
| T |
28097104 |
agagattttttaaccaacactccaatgtgatatctcatgcgttgaccgtaatgagcacaaagcatatcttccacctctttcaatttataccctttgaagc |
28097203 |
T |
 |
| Q |
129 |
agcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctata |
228 |
Q |
| |
|
| ||| ||||||||||||||||| || |||||||| ||||||||||||||| || || |||||| | || |||| || | | ||||| ||| ||| |
|
|
| T |
28097204 |
aacaagcaatgtcgagaaaaacactcctctcatcttcctccaaagcatcaaaactcacacgaagtattttttgaatctcttcactaggaattctttcata |
28097303 |
T |
 |
| Q |
229 |
ccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgca |
328 |
Q |
| |
|
||||| || ||| ||||||||| |||||| ||||||| | ||||| ||||| | || ||| || |||||||||||||||| ||||||| ||| |||| |
|
|
| T |
28097304 |
tcgatccaacaaagaattccattcttctatatgctttccatacaagttggaacctaatatttccaaggccaatggaaggccagcagcataatttattgca |
28097403 |
T |
 |
| Q |
329 |
caacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaatt |
428 |
Q |
| |
|
| ||||| || || || ||||||| | | ||| ||| |||| |||||||| | ||||||||| ||||| ||| ||||||| || || |
|
|
| T |
28097404 |
cggtttaaaatacactcataacttgaatcaacttgtttagctttaaaagccttccacctaagcaattcaagggcttctttcttgtttaactcgtgtgttt |
28097503 |
T |
 |
| Q |
429 |
catatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
|||||| | |||||||||||||||| |||||| | | | |||||||||||||| ||||||||||| |||| ||| |||||| |
|
|
| T |
28097504 |
catatgttacttcaatcccatgacttgctagcaagtttttatctcgagtggtaacaatcactctactgccagcaccaaaccaa |
28097586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 318
Target Start/End: Original strand, 27603410 - 27603654
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||| ||||||||||||||| ||| |||| | ||||||||||||| ||| ||||||| ||||| ||| |||||| |||| |||||||| |
|
|
| T |
27603410 |
ccataatgagcacgaagtatatcttcaaccacttccaatccacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaag |
27603509 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatctcctgtatctttttaatcggaatccttct-ataccgatctaatgcagatttccattctcctatattctttccaaata |
272 |
Q |
| |
|
||||| ||||||||||||| ||||| || ||||||||| | ||||| ||||| ||| | ||||| | | ||||||||| |||| |||||||||| | |
|
|
| T |
27603510 |
catcatagcttactttaagaatctcgtggatctttttattgggaat-cttctcatatccttctaacgtacccttccattcttctatcctctttccaaaca |
27603608 |
T |
 |
| Q |
273 |
agtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| |||||||||||||| ||| | || ||||| || |||||||| |
|
|
| T |
27603609 |
agttggaacccactacttccaaaactaagggaagtcctgaagcata |
27603654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 318
Target Start/End: Original strand, 27717242 - 27717449
Alignment:
| Q |
111 |
atttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatcttttt |
210 |
Q |
| |
|
||||| ||| ||||||||| ||| ||||||| ||||| ||| | |||| |||| ||||||||||||| | |||||||||||||||| || |||| ||| |
|
|
| T |
27717242 |
atttacatcttttgaagcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatcttttggatctcttt |
27717341 |
T |
 |
| Q |
211 |
aatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggcca |
310 |
Q |
| |
|
| | |||||||| ||||| |||||||| | |||||||| |||| ||||||||| ||||||| |||||||||| ||||| | | || ||||||||| |
|
|
| T |
27717342 |
attgggaatcctgtcatacccatctaatgtattcttccattcctctatgttctttccagataagttagaacccactatttctataactaacggaaggcca |
27717441 |
T |
 |
| Q |
311 |
gaagcata |
318 |
Q |
| |
|
|||||||| |
|
|
| T |
27717442 |
gaagcata |
27717449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 117 - 318
Target Start/End: Complemental strand, 26624704 - 26624503
Alignment:
| Q |
117 |
atcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcgg |
216 |
Q |
| |
|
||||||| |||| ||| |||| || ||||| ||| ||||||| |||| |||||||||||| |||| ||||||||||||| || |||| |||| | || |
|
|
| T |
26624704 |
atcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatcttttggatctctttattggg |
26624605 |
T |
 |
| Q |
217 |
aatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagca |
316 |
Q |
| |
|
|||||| ||||| |||||||| | | ||||||||| |||| |||||||||| ||||| |||||||| | ||||||| | || ||||||||||||||| |
|
|
| T |
26624604 |
aatcctgtcatacccatctaatgtatacttccattcttctatgctctttccaaacaagttggaacccacaatttctaaaactaacggaaggccagaagca |
26624505 |
T |
 |
| Q |
317 |
ta |
318 |
Q |
| |
|
|| |
|
|
| T |
26624504 |
ta |
26624503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 117 - 318
Target Start/End: Complemental strand, 26730681 - 26730480
Alignment:
| Q |
117 |
atcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcgg |
216 |
Q |
| |
|
||||||| |||| ||| |||| || ||||| ||| ||||||| |||| |||||||||||| |||| ||||||||||||| || |||| |||| | || |
|
|
| T |
26730681 |
atcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatcttttggatctctttattggg |
26730582 |
T |
 |
| Q |
217 |
aatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagca |
316 |
Q |
| |
|
|||||| ||||| |||||||| | | ||||||||| |||| |||||||||| ||||| |||||||| | ||||||| | || ||||||||||||||| |
|
|
| T |
26730581 |
aatcctgtcatacccatctaatgtatacttccattcttctatgctctttccaaacaagttggaacccacaatttctaaaactaacggaaggccagaagca |
26730482 |
T |
 |
| Q |
317 |
ta |
318 |
Q |
| |
|
|| |
|
|
| T |
26730481 |
ta |
26730480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 318
Target Start/End: Original strand, 27697336 - 27697536
Alignment:
| Q |
118 |
tcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcgga |
217 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||| ||| | ||||| |||| |||||||||||| |||| ||| ||||||||| || |||| |||| | ||| |
|
|
| T |
27697336 |
tcctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttccaaagcatcatagctcactctaagtatcttttggatctctttattggga |
27697435 |
T |
 |
| Q |
218 |
atccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcat |
317 |
Q |
| |
|
||||| ||||| ||||||| | | ||||||||| |||| ||||||||||| ||||| |||||||||| ||||| | | || |||||||||||| ||| |
|
|
| T |
27697436 |
atcctgtcatacccatctaatatatacttccattcttctatgttctttccaaacaagttagaacccactatttctataactaacggaaggccagaaacat |
27697535 |
T |
 |
| Q |
318 |
a |
318 |
Q |
| |
|
| |
|
|
| T |
27697536 |
a |
27697536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 318
Target Start/End: Complemental strand, 26885543 - 26885299
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||||||||||||||||| | ||| || ||||| | ||||||||||| ||| | || || ||||| ||| | ||||| |||| ||| |||| |
|
|
| T |
26885543 |
ccataatgagcatgaagtatatcttcgacctctgtccatttacaccctttgaagcaacaagctatatccagaaagacactttgctcctcttcctctaaag |
26885444 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataa |
273 |
Q |
| |
|
||||| ||||||||||||||||||| || |||||| || | |||||| || ||| | ||||| || | |||||| | |||| |||||||||| || |
|
|
| T |
26885443 |
catcatagcttactttaagtatctcttggatctttgtattaggaatcttttcatatccatctagtgtactcttccatgtttctatgctctttccaaacaa |
26885344 |
T |
 |
| Q |
274 |
gtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||| |||||||||| ||||| | | || |||||||| |||||||| |
|
|
| T |
26885343 |
gttggaacccactatttctataactaaaggaaggcccgaagcata |
26885299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 318
Target Start/End: Complemental strand, 26951126 - 26950975
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || | || | ||||| ||| |||| ||||||| ||| | |||||| ||||| |||||| |
|
|
| T |
26951126 |
tccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaattctttcatacttatctaataaagactcacattctgctatagtctttc |
26951027 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
26951026 |
caaacaagttagaacccactacttctaaagctaatggaaggccagcagcata |
26950975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 318
Target Start/End: Complemental strand, 26978763 - 26978612
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || | || | ||||| |||| |||| ||||||| ||| | || ||| ||||| |||||| |
|
|
| T |
26978763 |
tccaaagcatcaaagcttactttaagtatcttttggatatgttcaggtggaattcttccatacttatctaatatagactcacactctgctatactctttc |
26978664 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||| |||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
26978663 |
caaacaagcttgaacccactacttctaaagctaatggaagaccagaagcata |
26978612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 320
Target Start/End: Original strand, 27426317 - 27426564
Alignment:
| Q |
73 |
accataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaa |
172 |
Q |
| |
|
|||||||| |||||||||||| |||| | | || | ||||| | ||||||||||| ||| ||||||| ||||| ||| | ||||| |||| ||||||| |
|
|
| T |
27426317 |
accataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaa |
27426416 |
T |
 |
| Q |
173 |
gcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaata |
272 |
Q |
| |
|
| |||| |||| ||||||||||| || |||| |||| | |||||| || ||||| |||||||| | || |||||| |||| ||||||||||| | |
|
|
| T |
27426417 |
gaatcatagctcactttaagtattctttggatctctttattgggaatcttttcataccaatctaatgtattcttgcattcttctatgttctttccaaaca |
27426516 |
T |
 |
| Q |
273 |
agtttgaacccactacttctaaagccaatggaaggccagaagcataag |
320 |
Q |
| |
|
|||| |||||||||| ||||| | | | ||||||||||||||||||| |
|
|
| T |
27426517 |
agttagaacccactatttctataactaccggaaggccagaagcataag |
27426564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 26636948 - 26636878
Alignment:
| Q |
248 |
cattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||||| ||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26636948 |
cattctgctatactctttccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcata |
26636878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 26742914 - 26742844
Alignment:
| Q |
248 |
cattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||||| ||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26742914 |
cattctgctatactctttccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcata |
26742844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 26850014 - 26849944
Alignment:
| Q |
248 |
cattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||||| ||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26850014 |
cattcttctatactctttccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcata |
26849944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 318
Target Start/End: Original strand, 27676337 - 27676570
Alignment:
| Q |
85 |
atgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagctt |
184 |
Q |
| |
|
||||||||| | ||| | ||||| |||| || ||||||||| ||| ||| |||| || | ||| ||| ||||||| |||| |||||||||||| |||| |
|
|
| T |
27676337 |
atgaagtatctgttcgacttcttccaatctacatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcgtccaaagcatcatagctc |
27676436 |
T |
 |
| Q |
185 |
actttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaaccca |
284 |
Q |
| |
|
| | ||||||||| || || | |||| ||||| |||| |||| |||||||| ||| | |||||| | ||| |||||||||| ||||| ||||||| |
|
|
| T |
27676437 |
agtctaagtatcttttggatatctttatgtggaattcttccatacttatctaatgtagactcacattctgcaatactctttccaaacaagttagaaccca |
27676536 |
T |
 |
| Q |
285 |
ctacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |
|
|
| T |
27676537 |
ctacttctatcgctaatggaaggccagaagcata |
27676570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 26960427 - 26960357
Alignment:
| Q |
248 |
cattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||||| ||||| |||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26960427 |
cattctgctatactcttgccaaacaagttggaacccactacttctaaagctaatggaaggccagaagcata |
26960357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 117 - 318
Target Start/End: Original strand, 27591770 - 27591971
Alignment:
| Q |
117 |
atcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcgg |
216 |
Q |
| |
|
||||||||| ||| ||| |||| || | ||| ||| ||||||| |||| |||||||||||| |||| | | ||||||||| || || | |||| || |
|
|
| T |
27591770 |
atcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcttccaaagcatcatagctgagtctaagtatcttttggatatctttatgtgg |
27591869 |
T |
 |
| Q |
217 |
aatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagca |
316 |
Q |
| |
|
||| |||| |||| |||||||| ||| | |||||| | ||| |||||||||| ||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
27591870 |
aattcttccatacttatctaatgtagactcacattctgcaatactctttccaaacaagttagaacccactacttctatcgctaatggaaggccagaagca |
27591969 |
T |
 |
| Q |
317 |
ta |
318 |
Q |
| |
|
|| |
|
|
| T |
27591970 |
ta |
27591971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 26657357 - 26657194
Alignment:
| Q |
155 |
tgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctc |
254 |
Q |
| |
|
||||| |||| ||||||| ||||| ||||||||||||||||||| || ||||||||| | |||||| || ||| | |||||||| | ||||||| | |
|
|
| T |
26657357 |
tgctcctcttcctccaaatcatcatagcttactttaagtatctcttgaatctttttattgggaatcttttcatatccatctaatgtactcttccattttt |
26657258 |
T |
 |
| Q |
255 |
ctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
| || |||||||||| ||||||||| |||||||||||| | | || ||||| || |||||||| |
|
|
| T |
26657257 |
cgatgctctttccaaacaagtttgaagccactacttctataactaagggaagtcctgaagcata |
26657194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 26763328 - 26763165
Alignment:
| Q |
155 |
tgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctc |
254 |
Q |
| |
|
||||| |||| ||||||| ||||| ||||||||||||||||||| || ||||||||| | |||||| || ||| | |||||||| | ||||||| | |
|
|
| T |
26763328 |
tgctcctcttcctccaaatcatcatagcttactttaagtatctcttgaatctttttattgggaatcttttcatatccatctaatgtactcttccattttt |
26763229 |
T |
 |
| Q |
255 |
ctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
| || |||||||||| ||||||||| |||||||||||| | | || ||||| || |||||||| |
|
|
| T |
26763228 |
cgatgctctttccaaacaagtttgaagccactacttctataactaagggaagtcctgaagcata |
26763165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 26812846 - 26812751
Alignment:
| Q |
232 |
atctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgc |
327 |
Q |
| |
|
|||||||| ||||| ||| ||| | ||| |||||||||| ||||| |||||||||||||||| ||| |||||||||||||||| ||| ||||||| |
|
|
| T |
26812846 |
atctaatgtagattcccactcttcaatactctttccaaacaagttggaacccactacttctatagctaatggaaggccagaagtatattttactgc |
26812751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 27664101 - 27664164
Alignment:
| Q |
255 |
ctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||| |||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
27664101 |
ctatactctttccaaacaagttggaacccactacttttaaagctaatggaaggccagaagcata |
27664164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 318
Target Start/End: Complemental strand, 29469651 - 29469444
Alignment:
| Q |
111 |
atttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatcttttt |
210 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||| || ||| |||| || ||||||||||||||| | || |||||| || |||||||| |
|
|
| T |
29469651 |
atttatatcctttgaagcagcaggcaatgtcaagaaaaacagacttctcttcttcctgcaaagcatcaaagctaagttgtagtatcgtttggatcttttt |
29469552 |
T |
 |
| Q |
211 |
aatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggcca |
310 |
Q |
| |
|
| ||||||||| ||| |||||||||||| |||| |||| | | || |||| ||| |||| ||||| | ||||| ||||||| |||||||||| |
|
|
| T |
29469551 |
atcaggaatcctttcataacgatctaatgcatatttacattgttcaattgtcttattaaaaaagtgagaacctatgacttccaaagccagtggaaggcca |
29469452 |
T |
 |
| Q |
311 |
gaagcata |
318 |
Q |
| |
|
|||||||| |
|
|
| T |
29469451 |
gaagcata |
29469444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 26812635 - 26812567
Alignment:
| Q |
443 |
atcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||| ||| |||||||| |||||||||| |||| |
|
|
| T |
26812635 |
atcccatgacatgatagcaaatgtctgtctcgagtggtaatgatgactctacttccaggaccgagccaa |
26812567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 25075153 - 25075099
Alignment:
| Q |
264 |
ttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
25075153 |
ttccaaacaagttggaacccacaacttctaaagctaatggaaggccagaagcata |
25075099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 318
Target Start/End: Complemental strand, 26825249 - 26825051
Alignment:
| Q |
120 |
ctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaat |
219 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||| | || | |||| |||||||||||| |||||||| |||||||||| || |||||||| ||||| |
|
|
| T |
26825249 |
ctttgaagcaacaagcaatgtcgaggaaaacactttgttgctcttcttccaaagcatcatagcttactctaagtatctcttggatctttttgtcaggaat |
26825150 |
T |
 |
| Q |
220 |
ccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||| | |||||||||| |||||| | ||| |||||||||| || || |||||||||| |||||| | || |||||||| |||||||| |
|
|
| T |
26825149 |
cctttcatatccatctaatgcacccttccatatttgtatgctctttccaaacaaattggaacccactatttctaatactaagggaaggcccgaagcata |
26825051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 27530009 - 27530131
Alignment:
| Q |
73 |
accataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaa |
172 |
Q |
| |
|
|||||||| |||||||||||| |||| | ||| | ||||| | ||||||||||| ||| ||||||| ||||| ||| | ||||| |||||||||||| |
|
|
| T |
27530009 |
accataatgagcatgaagtatttctttgacctctggccatttacaccctttgaagcaacaagcaatgtctagaaagacactttgctcttctttctccaaa |
27530108 |
T |
 |
| Q |
173 |
gcatcaaagcttactttaagtat |
195 |
Q |
| |
|
| |||| |||| ||||||||||| |
|
|
| T |
27530109 |
gaatcatagctcactttaagtat |
27530131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 29827094 - 29827025
Alignment:
| Q |
442 |
aatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||| ||||||| | || |||||||| |||||| |
|
|
| T |
29827094 |
aatcccatgacttgttagcaaatgttggtctcgagtggtaatgatcactatgctgccaggaccaaaccaa |
29827025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 318
Target Start/End: Complemental strand, 26862963 - 26862812
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || |||| |||| | |||||| || ||||| |||||||| ||| ||||||| | || |||||| |
|
|
| T |
26862963 |
tccaaagcatcatagcttactttaagtatcctttggatctctttattgggaatcttttcatacccatctaatgtgcattgccattcttccatgctctttc |
26862864 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||||| |||||||||| ||| | | | || |||||||| |||||||| |
|
|
| T |
26862863 |
caaacaagttagaacccactatttcgagaactaacggaaggccggaagcata |
26862812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 315
Target Start/End: Complemental strand, 26938345 - 26938264
Alignment:
| Q |
234 |
ctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagc |
315 |
Q |
| |
|
|||||| ||||| ||||||| ||||| ||||||||| || | ||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
26938345 |
ctaatgtagattcccattctgctatacactttccaaacaaatgggaacctacaacttctaaagctaatggaaggccagaagc |
26938264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 29523336 - 29523255
Alignment:
| Q |
115 |
atatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatc |
196 |
Q |
| |
|
||||||||||||||| ||| |||| |||||||||| | ||||| ||||||||| ||||||||||| | ||||||||||| |
|
|
| T |
29523336 |
atatcctttgaagcaacaaacaatatcgagaaaaatactctgcgtatctttctctaaagcatcaaatatatctttaagtatc |
29523255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 2186356 - 2186064
Alignment:
| Q |
20 |
atctttttgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatc |
119 |
Q |
| |
|
|||||| |||| ||||||||| ||||||| | || |||| ||| ||||| | | ||||| ||||| ||||||||||| | |||| || | || ||| |
|
|
| T |
2186356 |
atctttatgagtgatttttcaaccaacactccaatatgatttttgatgcaataagtataatgagcatcaagtatatcttggaactcttccagtctacatc |
2186257 |
T |
 |
| Q |
120 |
ctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaat |
219 |
Q |
| |
|
||||||| | ||| ||||||||||||| | | ||| || || | || ||||||||||||||| ||||||||||||| || || |||||| | | |
|
|
| T |
2186256 |
ctttgaaaaaacaagcaatgtcgagaaagagactcttatcttcctcctgcaaagcatcaaagctgactttaagtatctgttggatgtttttaggaacagt |
2186157 |
T |
 |
| Q |
220 |
ccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccaga |
312 |
Q |
| |
|
|||| ||| ||| | |||| ||| ||||||| || || ||||||| | |||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
2186156 |
cctttcatatcgagccaatgtagaactccattcgtctttagactttccagacaagtcagaacccactacttctaaagctaatggaaggccaga |
2186064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 499
Target Start/End: Original strand, 26892649 - 26892721
Alignment:
| Q |
427 |
ttcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactacca |
499 |
Q |
| |
|
|||||||| | ||||||| ||||||| |||||||| |||||||||||| ||||||||||||| ||||||| |
|
|
| T |
26892649 |
ttcatatgttttttcaatatgatgacttgctagcaaatttctgtctcgagtagtaacgatcactcgactacca |
26892721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 511
Target Start/End: Original strand, 27592020 - 27592164
Alignment:
| Q |
367 |
atttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaattcatatgctctttcaatcccatgactttttagcaaatgt |
466 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||| ||| |||| |||| || | |||||| | |||| |||||||||| | ||| || ||| |
|
|
| T |
27592020 |
atttttaaaagccttccacctcaacaattcaagagcttctgtcccattcaactcttctactgcatatgttttttctatcccatgacagtctagtaagtgt |
27592119 |
T |
 |
| Q |
467 |
ctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
| ||||| ||||| | ||| ||||| || ||||||||||||||| |
|
|
| T |
27592120 |
ttatctcgggtggtgatgatgactctgcttccaggaccgaaccaa |
27592164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 27676619 - 27676671
Alignment:
| Q |
367 |
atttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaact |
419 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
27676619 |
atttttaaaagccttccacctcaacaattcaagagcttctgtctcattcaact |
27676671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 483
Target Start/End: Complemental strand, 26938143 - 26938096
Alignment:
| Q |
436 |
tctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaac |
483 |
Q |
| |
|
||||||||||||||||| | |||||||||| |||||||||||||||| |
|
|
| T |
26938143 |
tctttcaatcccatgacatgatagcaaatgtttgtctcgagtggtaac |
26938096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 25484535 - 25484413
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||||||||||| | || | || | || ||||||| ||||||||| | ||| ||||||| ||||| ||| |||| || | || || ||||| |
|
|
| T |
25484535 |
ccataatgagcatgaagtattttttttacttttgtccatttataccctttgaagtaacaagcaatgtctagaaagacactctgatccttttccttcaaag |
25484436 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatc |
196 |
Q |
| |
|
||||| ||||||||| ||||||| |
|
|
| T |
25484435 |
catcatagcttacttgaagtatc |
25484413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 25512367 - 25512245
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||||||||||| | || | || | || ||||||| ||||||||| | ||| ||||||| ||||| ||| |||| || | || || ||||| |
|
|
| T |
25512367 |
ccataatgagcatgaagtattttttttacttttgtccatttataccctttgaagtaacaagcaatgtctagaaagacactctgatccttttccttcaaag |
25512268 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatc |
196 |
Q |
| |
|
||||| ||||||||| ||||||| |
|
|
| T |
25512267 |
catcatagcttacttgaagtatc |
25512245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 26057398 - 26057276
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||||||||||| | || || | | || ||||| | ||||||||||| ||| ||||||| ||||| ||| |||| || | || || ||||| |
|
|
| T |
26057398 |
ccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaag |
26057299 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatc |
196 |
Q |
| |
|
||||| ||||||||| ||||||| |
|
|
| T |
26057298 |
catcatagcttacttgaagtatc |
26057276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 26077368 - 26077246
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||||||||||| | || || | | || ||||| | ||||||||||| ||| ||||||| ||||| ||| |||| || | || || ||||| |
|
|
| T |
26077368 |
ccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaag |
26077269 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatc |
196 |
Q |
| |
|
||||| ||||||||| ||||||| |
|
|
| T |
26077268 |
catcatagcttacttgaagtatc |
26077246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 27215928 - 27215806
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||||||||||||||| | | | || ||||| | ||||||||||| ||| ||||||| ||||| ||| ||| ||| | || ||||| || |
|
|
| T |
27215928 |
ccataatgggcatgaagtatatctttgacctttgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactcttctccttttcctccagag |
27215829 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatc |
196 |
Q |
| |
|
||||| |||| |||||||||||| |
|
|
| T |
27215828 |
catcatagctgactttaagtatc |
27215806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 511
Target Start/End: Original strand, 27530370 - 27530444
Alignment:
| Q |
437 |
ctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||| ||||||||| | ||||| || ||| ||| |||||| |||| ||| |||||||| ||||||||||||||| |
|
|
| T |
27530370 |
ctttctatcccatgaatctttagtaagtgtttgtttcgagtagtaatgatgactctactcccaggaccgaaccaa |
27530444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 29476962 - 29477024
Alignment:
| Q |
265 |
tccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgc |
327 |
Q |
| |
|
|||||| ||| ||||||| | |||||| || ||||||||||| || ||||||||||||||||| |
|
|
| T |
29476962 |
tccaaacaagcttgaacctattacttccaaggccaatggaagcccggaagcataagttactgc |
29477024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 26144299 - 26144222
Alignment:
| Q |
119 |
cctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatc |
196 |
Q |
| |
|
||||||||||| ||| ||||||| ||||| ||| |||| || | || || |||||||||| ||||||||| ||||||| |
|
|
| T |
26144299 |
cctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc |
26144222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 27680119 - 27680086
Alignment:
| Q |
381 |
tccacctcaacaattcaagagcttcggtctcatt |
414 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
27680119 |
tccacctcaacaattcaagagcttctgtctcatt |
27680086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 28228455 - 28228399
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgt-atctttttaatcggaatcctt |
223 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||| || |||||||| ||||||||| |
|
|
| T |
28228455 |
tccaaagcatcaaagcttattttaagtatct-ctgtgatatttttaatgggaatcctt |
28228399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 27663963 - 27664043
Alignment:
| Q |
117 |
atcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatct |
197 |
Q |
| |
|
||||||||||||| ||| |||| || | ||| ||| |||| | |||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
27663963 |
atcctttgaagcaacaagcaatatccaaaaagacactctgttgttcttcttccaaagtatcaaagcttactttaagtatct |
27664043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 28490202 - 28490270
Alignment:
| Q |
83 |
gcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaaca |
151 |
Q |
| |
|
||||||||||| ||||| | | ||||||||| ||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
28490202 |
gcatgaagtatttcttcgactcttttcaatttccatcctttgaagcaacaagcaatgtcaagaaaaaca |
28490270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 29802612 - 29802680
Alignment:
| Q |
83 |
gcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaaca |
151 |
Q |
| |
|
||||||||||| ||||| | | ||||||||| ||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
29802612 |
gcatgaagtatttcttcgactcttttcaatttccatcctttgaagcaacaagcaatgtcaagaaaaaca |
29802680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 19 - 511
Target Start/End: Original strand, 56945 - 57437
Alignment:
| Q |
19 |
gatctttttgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatat |
118 |
Q |
| |
|
||||||| ||||||||||||||| |||||| || ||||||| |||||||||| ||||||||| |||||||||||||||||||| |||||| || | | || |
|
|
| T |
56945 |
gatctttatgagagatttttcatgcaacactctaatttgatgtttcatgcagctaccataatgagcatgaagtatatcttcaacttcttttaaatcacat |
57044 |
T |
 |
| Q |
119 |
cctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaa |
218 |
Q |
| |
|
|||| ||| | ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
57045 |
ccttctaagaaacaagaaatgtcgagaaaaacattcttctcatcttcctccaaagcatcaaagcttactttaagtatctcttggatctttttaatgggaa |
57144 |
T |
 |
| Q |
219 |
tccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
57145 |
tcctttcatactgatttaatgcagatttccattctcctatattctttccaaacaagttcgaacccactacttctaaggccaatggaaggcctgaagcata |
57244 |
T |
 |
| Q |
319 |
agttactgcacaacgtaaaacaccatcgaaatttgaatccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaac |
418 |
Q |
| |
|
|||||||||| ||||||| |||||||||| || | || ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
57245 |
agttactgcaaggtgtaaaacgttgtcgaaatttggattgactttgttatttttgaaagcattccacctcaacaattcaagagcttctttctcatttaac |
57344 |
T |
 |
| Q |
419 |
ttaggtaattcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||| || |||||||||||||||||||||||||| | |||||| ||| |||||||||||||| ||||||| ||||||||||||| |||||| |
|
|
| T |
57345 |
ttatctatttcatatgctctttcaatcccatgacctgctagcaattgttcgtctcgagtggtaatgatcactttactaccaggaccaaaccaa |
57437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 113 - 327
Target Start/End: Complemental strand, 3281096 - 3280882
Alignment:
| Q |
113 |
ttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaa |
212 |
Q |
| |
|
||||| ||||| ||||| ||| ||||||||||||||||| | ||||| |||| ||||||||||||||| || ||||||||||||| ||| |||| |||| |
|
|
| T |
3281096 |
ttataccctttaaagcaacaagcaatgtcgagaaaaacactttgctcgtcttcctccaaagcatcaaaactcactttaagtatcttctgaatctctttat |
3280997 |
T |
 |
| Q |
213 |
tcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccaga |
312 |
Q |
| |
|
| ||||||||| ||| ||||| || ||| ||||| ||| ||||||||||||||| ||||| ||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
3280996 |
taggaatcctttcatatcgatccaacaaagaattccactcttttatattctttccaaacaagttggaacctaatacttctaatgccaatggaaggccaga |
3280897 |
T |
 |
| Q |
313 |
agcataagttactgc |
327 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
3280896 |
agcataatttactgc |
3280882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 17992083 - 17992165
Alignment:
| Q |
236 |
aatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||||| ||||||| ||| ||| | ||||||||| ||||| |||||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
17992083 |
aatgcacatttccaatctgctaaacactttccaaacaagttggaacccactacttctaaagctaatgggaggccagcagcata |
17992165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 329
Target Start/End: Complemental strand, 17662589 - 17662492
Alignment:
| Q |
232 |
atctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcac |
329 |
Q |
| |
|
|||||||| |||||||||| | ||| | | || ||||| |||| ||||| | |||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17662589 |
atctaatgaagatttccatacatctaaacttttgccaaacaagtgagaacctattacttccaaagccaatggaaggccagaagcataagaaactgcac |
17662492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 329
Target Start/End: Complemental strand, 17713615 - 17713518
Alignment:
| Q |
232 |
atctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcac |
329 |
Q |
| |
|
|||||||| |||||||||| | ||| | | || ||||| |||| ||||| | |||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17713615 |
atctaatgaagatttccatacatctaaacttttgccaaacaagtgagaacctattacttccaaagccaatggaaggccagaagcataagaaactgcac |
17713518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 499
Target Start/End: Complemental strand, 3280770 - 3280710
Alignment:
| Q |
439 |
ttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactacca |
499 |
Q |
| |
|
|||||||||||||||| || ||| ||| ||||||||||||||| |||||| ||||||||| |
|
|
| T |
3280770 |
ttcaatcccatgacttgataacaagtgtttgtctcgagtggtaatgatcaccctactacca |
3280710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 59 - 511
Target Start/End: Complemental strand, 16692358 - 16691906
Alignment:
| Q |
59 |
tatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgct |
158 |
Q |
| |
|
||||| ||||| |||||||||| |||| ||||||| |||| ||| |||| | ||||||||||||||| ||| ||||||| | ||||||| ||| | |
|
|
| T |
16692358 |
tattttatgcatttaccataatgagcacaaagtataaactcaacttccgtcaaatcatatcctttgaagcaacaagcaatgtccaaaaaaacactctttt |
16692259 |
T |
 |
| Q |
159 |
catctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctat |
258 |
Q |
| |
|
|||||| ||||||| |||||| |||||||||||||| | || || |||| ||||||| | ||| ||||| |||| ||||||||||||| |||| |
|
|
| T |
16692258 |
catcttcctccaaactatcaaaacttactttaagtattttgtgaattcgtttaccaggaatccattcatatcgatcaaatgtagatttccattcttctat |
16692159 |
T |
 |
| Q |
259 |
attctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcacaacgtaaaacaccatcgaaatttgaatcc |
358 |
Q |
| |
|
|||||||||||| ||||| || || |||||||||||||| |||||||||||||||||||||||||| || | ||||| |||||| ||||||| |
|
|
| T |
16692158 |
attctttccaaacaagttagatcctactacttctaaagctaatggaaggccagaagcataagttacaacatattttaaaatgtactcgaaacttgaatcg |
16692059 |
T |
 |
| Q |
359 |
atcttattatttttgaaagaattccacctcaacaattcaagagcttcggtct-catttaacttaggtaattcatatgctctttcaatcccatgacttttt |
457 |
Q |
| |
|
| || |||||||| |||| ||||||||||| | ||| |||||||| ||| ||||||| | | ||||||| ||| ||||| ||||||||| || |
|
|
| T |
16692058 |
actttgttatttttaaaagtcttccacctcaatagttctagagcttc-ttctccatttaaaccatccacttcatatattctatcaataccatgacttgtt |
16691960 |
T |
 |
| Q |
458 |
agcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
|| || ||| ||||||||||||||| ||| |||||||| |||||||| |||||| |
|
|
| T |
16691959 |
agtaagtgtttgtctcgagtggtaatgatgactctacttccaggaccaaaccaa |
16691906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 81; Significance: 7e-38; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 74 - 318
Target Start/End: Original strand, 28126381 - 28126625
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||||||||||| | ||||| ||| ||||| |||| ||||||||||||||| | || |||||||| ||| | |||||||||| |||||||| |
|
|
| T |
28126381 |
ccataatgagcatgaagtatcttttcaacctctgtcaatctataccctttgaagcagcaagctatatcgagaaagacactttgctcatcttcctccaaag |
28126480 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataa |
273 |
Q |
| |
|
||||| |||||| ||||| |||||| || ||||||||| | |||||| || ||| | |||||||| | ||||||||| |||| ||||||||||||| |
|
|
| T |
28126481 |
catcatagcttagtttaaatatctcttggatctttttatttggaatcttttcatatccatctaatgtacccttccattcttctatgctctttccaaataa |
28126580 |
T |
 |
| Q |
274 |
gtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||| |||||||||| ||||| | | || |||||||| |||||||| |
|
|
| T |
28126581 |
gttggaacccactatttctataactaagggaaggcctgaagcata |
28126625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 115 - 329
Target Start/End: Original strand, 267087 - 267301
Alignment:
| Q |
115 |
atatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatc |
214 |
Q |
| |
|
||||||||||||||| ||| ||||||| | ||| ||| ||||||| |||| |||||| ||||| |||| ||||||||||||| || |||| |||| | |
|
|
| T |
267087 |
atatcctttgaagcaacaagcaatgtctaaaaagacactctgctcctcttcttccaaaccatcatagctcactttaagtatcttttggatctctttattg |
267186 |
T |
 |
| Q |
215 |
ggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaag |
314 |
Q |
| |
|
|||||| | ||||| |||||||| | ||||||||| |||| |||||||||| ||||| |||||||| | ||||||| | || ||||||||||||| |
|
|
| T |
267187 |
ggaatcttatcatacccatctaatgtacccttccattcttctatgctctttccaaacaagttagaacccacaatttctaaaactaacggaaggccagaag |
267286 |
T |
 |
| Q |
315 |
cataagttactgcac |
329 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
267287 |
cataagcaactgcac |
267301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 108 - 293
Target Start/End: Original strand, 28132241 - 28132426
Alignment:
| Q |
108 |
tcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctt |
207 |
Q |
| |
|
||||| |||| || |||||||| ||| | || || ||||| ||| | ||||| |||| |||||||||||| | |||||||||| |||||| || ||||| |
|
|
| T |
28132241 |
tcaatctataccccttgaagcaacaagctatatccagaaagacactttgctcctcttcctccaaagcatcgtaacttactttaaatatctcatggatctt |
28132340 |
T |
 |
| Q |
208 |
tttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttcta |
293 |
Q |
| |
|
|||| | |||||| || ||| | |||||||| | | ||||||||| |||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
28132341 |
tttattaggaatcttttcatatccatctaatgtacacttccattcttctatgctctttccaaataagtttgaacccactatttcta |
28132426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 317
Target Start/End: Original strand, 5922216 - 5922418
Alignment:
| Q |
115 |
atatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatc |
214 |
Q |
| |
|
||||||||||||||| ||| |||| || ||||||||| | | ||| |||| ||||||||||||||||| ||||| || | | || ||||||||| |
|
|
| T |
5922216 |
atatcctttgaagcaacaagcaatatcaagaaaaacacttttctcttcttcttccaaagcatcaaagctcacttttagcaacgtttgcatctttttatca |
5922315 |
T |
 |
| Q |
215 |
ggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaag |
314 |
Q |
| |
|
||||||||| ||| |||||||||| |||||| |||| | ||| | || |||||||| ||||| | ||||||||||||||| ||||||||||||| |
|
|
| T |
5922316 |
ggaatcctttcataacgatctaatgtagatttacattgttctactgttttatgaaataagtgagaacctattacttctaaagccaaaggaaggccagaag |
5922415 |
T |
 |
| Q |
315 |
cat |
317 |
Q |
| |
|
||| |
|
|
| T |
5922416 |
cat |
5922418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 26137176 - 26137120
Alignment:
| Q |
262 |
ctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||||||||| ||| | |||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
26137176 |
ctttccaaacaagctggaacccactacttctaaagctaacggaaggccagaagcata |
26137120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 427 - 504
Target Start/End: Complemental strand, 26137011 - 26136934
Alignment:
| Q |
427 |
ttcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggacc |
504 |
Q |
| |
|
||||||| ||||| ||||||||||| | |||||||||| ||||||| ||||||| ||| |||||||| |||||||| |
|
|
| T |
26137011 |
ttcatatattcttttaatcccatgacatgatagcaaatgtttgtctcgggtggtaatgatgactctactcccaggacc |
26136934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 56 - 511
Target Start/End: Original strand, 5089638 - 5090093
Alignment:
| Q |
56 |
tgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattct |
155 |
Q |
| |
|
|||||||||||||| | |||||||| |||| |||||||| ||| | || | ||| ||||||||||||| || ||| |||||||||| |||||| ||| |
|
|
| T |
5089638 |
tgatatttcatgcaataaccataatgagcacaaagtatatattcgacctcatccaagctatatcctttgaaacaacaagcaatgtcgaggaaaacactct |
5089737 |
T |
 |
| Q |
156 |
gctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcc |
255 |
Q |
| |
|
|||||| || | ||| || |||||| ||| ||||||||| || || | |||| | ||||||||| |||| ||||| | ||||||||||| | | |
|
|
| T |
5089738 |
gctcatattcacctaaattattaaagctcactataagtatcttttggatttctttattaggaatcctttcatactcatctagtaaagatttccatttttc |
5089837 |
T |
 |
| Q |
256 |
tatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcacaacgtaaaacaccatcgaaatttgaa |
355 |
Q |
| |
|
||||| ||||||||| || || |||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| || || || ||| | |
|
|
| T |
5089838 |
tatatcctttccaaacaaattggaacccacaacttctaaagccaatggaaggccagaagcataagttaccacacggtttaaaattccttcataacttgga |
5089937 |
T |
 |
| Q |
356 |
tccatcttattatttttgaaagaattccacctcaacaattcaagagcttcggtctcatttaacttaggtaattcatatgctctttcaatcccatgacttt |
455 |
Q |
| |
|
| | || ||||||| |||| |||||||| || |||| |||||||||| |||||||||| | || ||| |||| | | ||||||||||||| || |
|
|
| T |
5089938 |
ttaacagtactatttttaaaagccttccaccttaataattgaagagcttcgttctcatttaaaccatctacttcgtatgttatatcaatcccatgacatt |
5090037 |
T |
 |
| Q |
456 |
ttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaa |
511 |
Q |
| |
|
||||||| ||| ||||||||||||||| ||| ||||| || ||| |||| |||||| |
|
|
| T |
5090038 |
ttagcaagtgtttgtctcgagtggtaatgatgactctgctgccaagaccaaaccaa |
5090093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 320
Target Start/End: Complemental strand, 18075238 - 18074991
Alignment:
| Q |
73 |
accataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaa |
172 |
Q |
| |
|
|||||||| |||||||||||| |||| | | || | ||||| | ||||||||||| ||| ||||||| ||||| ||| | ||||| |||| ||||||| |
|
|
| T |
18075238 |
accataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaa |
18075139 |
T |
 |
| Q |
173 |
gcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaata |
272 |
Q |
| |
|
| |||| |||| ||||||||||| || |||| |||| | |||||| || ||||| |||||||| | || |||||| |||| ||||||||||| | |
|
|
| T |
18075138 |
gaatcatagctcactttaagtattctttggatctctttattgggaatcttttcataccaatctaatgtattcttgcattcttctatgttctttccaaaca |
18075039 |
T |
 |
| Q |
273 |
agtttgaacccactacttctaaagccaatggaaggccagaagcataag |
320 |
Q |
| |
|
|||| |||||||||| ||||| | | | ||||||||||||||||||| |
|
|
| T |
18075038 |
agttagaacccactatttctataactaccggaaggccagaagcataag |
18074991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 318
Target Start/End: Original strand, 18678355 - 18678506
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || | || | ||||| ||| |||| |||||||| ||| | |||||| |||||||||| |
|
|
| T |
18678355 |
tccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaattctttcatacttatctaatgtagactcacattctgaaatattctttc |
18678454 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
18678455 |
caaacaagttggaacccactacttctatagctaatggaaggccagaagcata |
18678506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 18722881 - 18723031
Alignment:
| Q |
168 |
ccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttcc |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||| || || | || | ||||| ||| |||| |||||||| ||| | |||||| | ||| ||||||| |
|
|
| T |
18722881 |
ccaaagcatcaaagcttactttaagtatcttttggatatcttcatctggaattctttcatacatatctaatgtagactcacattctgcaatactctttcc |
18722980 |
T |
 |
| Q |
268 |
aaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||| ||||| |||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
18722981 |
aaacaagttggaacccactacttctatagctaatggaaggccagaagcata |
18723031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 318
Target Start/End: Original strand, 18654272 - 18654423
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
|||||||||||||| |||||||||||||||| || || | || | ||||| ||| |||| |||||||| ||||| |||||| | ||| |||||| |
|
|
| T |
18654272 |
tccaaagcatcaaaacttactttaagtatcttttggatatcttcatgtggaattctttcatacttatctaatgtagattcacattctgcaatactctttc |
18654371 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||||| |||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
18654372 |
caaacaagttggaacccacgacttctatagctaatggaaggccagaagcata |
18654423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 318
Target Start/End: Original strand, 18688421 - 18688572
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || | || | ||||| ||| |||| |||||||| ||| | |||||| ||| |||||| |
|
|
| T |
18688421 |
tccaaagcatcaaagcttactttaagtatcttttggatatcttcgtttggaattctttgatacttatctaatgtagactcacattctgaaatactctttc |
18688520 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
18688521 |
caaacaagttggaacccactacttctatagctaatggaaggccagaagcata |
18688572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 318
Target Start/End: Original strand, 18698195 - 18698346
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || | || | ||||| ||| |||| |||||||| ||| | |||||| | | | |||||| |
|
|
| T |
18698195 |
tccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaattctttcatacttatctaatgtagagtcacattctgcaaaactctttc |
18698294 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
18698295 |
caaacaagttggaacccactacttctagagctaatggaaggccagaagcata |
18698346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 318
Target Start/End: Original strand, 18730299 - 18730450
Alignment:
| Q |
167 |
tccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttc |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || | || | ||||| ||| |||| |||||||| ||| | |||||| | | | |||||| |
|
|
| T |
18730299 |
tccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaattctttcatacttatctaatgtagaatcacattctgcaaaactctttc |
18730398 |
T |
 |
| Q |
267 |
caaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
18730399 |
caaacaagttggaacccactacttctagagctaatggaaggccagaagcata |
18730450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1870 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1870
Description:
Target: scaffold1870; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 28 - 318
Target Start/End: Complemental strand, 291 - 1
Alignment:
| Q |
28 |
gagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaag |
127 |
Q |
| |
|
||||||||||||| ||||||| | | |||| ||| ||||| | ||||||| |||| | ||||||||||||| || ||| || | ||||||||||| |
|
|
| T |
291 |
gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag |
192 |
T |
 |
| Q |
128 |
cagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctat |
227 |
Q |
| |
|
|| || ||||||| ||||||||| | |||| |||| ||||||||||||| ||||||||||||||||||| || ||||||||| | |||||| || || |
|
|
| T |
191 |
caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttcat |
92 |
T |
 |
| Q |
228 |
accgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
| | |||||||| | ||||||||| |||| |||||||||| ||||| |||||||||| ||||||| | || |||||||| |||||||| |
|
|
| T |
91 |
atccatctaatgtacccttccattcttctatcgtctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcata |
1 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 74 - 318
Target Start/End: Original strand, 12381 - 12625
Alignment:
| Q |
74 |
ccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaag |
173 |
Q |
| |
|
||||||| |||| ||||||||| ||||| || ||| || | ||||||||||||| || ||||||| ||||||||| | |||| |||| |||||||| |
|
|
| T |
12381 |
ccataatgagcacgaagtatatattcaaactccttccatccacatcctttgaagcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaag |
12480 |
T |
 |
| Q |
174 |
catcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataa |
273 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||||||| | |||||| || ||| | |||||||| | ||||||||| |||| |||||||||| || |
|
|
| T |
12481 |
catcatagcttactttaagtatctcgtggatctttttattgggaatcttttcatatccatctaatgtacccttccattcttctatcgtctttccaaacaa |
12580 |
T |
 |
| Q |
274 |
gtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
||| |||||||||| ||||||| | || |||||||| |||||||| |
|
|
| T |
12581 |
gttggaacccactatttctaaaactaagggaaggcccgaagcata |
12625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 117 - 318
Target Start/End: Original strand, 3461 - 3662
Alignment:
| Q |
117 |
atcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcgg |
216 |
Q |
| |
|
||||||||||||| || ||||||| ||||||||| | |||| |||| ||||||||||||| |||||||||||||||||| || ||||||||| | || |
|
|
| T |
3461 |
atcctttgaagcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctggtggatctttttattggg |
3560 |
T |
 |
| Q |
217 |
aatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagca |
316 |
Q |
| |
|
|||| || ||| | |||||||| | ||||||||| |||| |||||||||| ||||| |||||||||| ||||||| | || |||||||| |||||| |
|
|
| T |
3561 |
aatcttttcatatccatctaatgtacccttccattcttctatcgtctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagca |
3660 |
T |
 |
| Q |
317 |
ta |
318 |
Q |
| |
|
|| |
|
|
| T |
3661 |
ta |
3662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 482
Target Start/End: Original strand, 3781 - 3826
Alignment:
| Q |
437 |
ctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaa |
482 |
Q |
| |
|
||||| |||||||||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
3781 |
ctttctatcccatgacttcttagcaagtgtttgtctcgagtggtaa |
3826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 28 - 318
Target Start/End: Complemental strand, 9009 - 8719
Alignment:
| Q |
28 |
gagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaag |
127 |
Q |
| |
|
||||||||||||| ||||||| | | |||| ||| ||||| | ||||||| |||| | ||||||||||||| || ||| || | ||||||||||| |
|
|
| T |
9009 |
gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag |
8910 |
T |
 |
| Q |
128 |
cagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctat |
227 |
Q |
| |
|
|| || ||||||| ||||||||| | |||| |||| ||||||||||||| | ||||||||||||||||| || ||||||||| | |||||| || || |
|
|
| T |
8909 |
caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcataacttactttaagtatctcgtggatctttttattgggaatcttttcat |
8810 |
T |
 |
| Q |
228 |
accgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
| | |||||||| | ||||||||| |||| |||||||||| ||||| |||||||||| ||||||| | || |||||||| |||||||| |
|
|
| T |
8809 |
atccatctaatgtacccttccattcttctatcgtctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcata |
8719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 318
Target Start/End: Original strand, 2282 - 2489
Alignment:
| Q |
111 |
atttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatcttttt |
210 |
Q |
| |
|
||||| ||| ||||||||| ||| ||||||| ||||| ||| | |||| |||| ||||||||||||| | |||||||||||||||| || |||| ||| |
|
|
| T |
2282 |
atttacatcttttgaagcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatcttttggatctcttt |
2381 |
T |
 |
| Q |
211 |
aatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggcca |
310 |
Q |
| |
|
| | |||||||| ||||| |||||||| | |||||||| |||| ||||||||| ||||||| |||||||||| ||||| | | || ||||||||| |
|
|
| T |
2382 |
attgggaatcctgtcatacccatctaatgtattcttccattcctctatgttctttccagataagttagaacccactatttctataactaacggaaggcca |
2481 |
T |
 |
| Q |
311 |
gaagcata |
318 |
Q |
| |
|
|||||||| |
|
|
| T |
2482 |
gaagcata |
2489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 329
Target Start/End: Complemental strand, 31906467 - 31906275
Alignment:
| Q |
137 |
atgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatcta |
236 |
Q |
| |
|
||||| ||||||||| | | |||||||| ||||||||||||||| |||||||| ||||| | || |||| |||| | ||||| || ||| |||| || |
|
|
| T |
31906467 |
atgtcaagaaaaacacttttctcatcttcctccaaagcatcaaaacttactttgagtatattttggatctctttatttggaatgatttcatatcgatgta |
31906368 |
T |
 |
| Q |
237 |
atgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcac |
329 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| || ||||| | ||| |||||||||||||| |||||||||||| |||||||| |
|
|
| T |
31906367 |
atgcagattcccattcttgtatattctttccaaataaattggaaccaataactatcaaagccaatggaagtccagaagcataacctactgcac |
31906275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 135 - 329
Target Start/End: Complemental strand, 35984714 - 35984520
Alignment:
| Q |
135 |
caatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatc |
234 |
Q |
| |
|
||||||| ||||||||| | |||||||||| ||| ||||||||||| |||||||||||||||| || || | |||| | ||||| || |||||| | |
|
|
| T |
35984714 |
caatgtcaagaaaaacactttgctcatcttcctctaaagcatcaaaacttactttaagtatcttttggatgtctttattaggaatggtttcataccggtg |
35984615 |
T |
 |
| Q |
235 |
taatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataagttactgcac |
329 |
Q |
| |
|
||||||||||| ||| ||| || ||||||||||||| || ||||| | |||| |||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
35984614 |
taatgcagattcccactcttgtactgtctttccaaataaattggaacctattactatcaaagccaatggaagtccagaagcatatgctactgcac |
35984520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 318
Target Start/End: Original strand, 29272589 - 29272788
Alignment:
| Q |
119 |
cctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaa |
218 |
Q |
| |
|
||||||||||| ||| ||||||| ||||| ||| | || | |||| |||||||||||| | |||||||||||||||| || ||| ||||| | |||| |
|
|
| T |
29272589 |
cctttgaagcaacaagcaatgtccagaaagacactttgttgctcttcttccaaagcatcataacttactttaagtatctggtggatccttttattgggaa |
29272688 |
T |
 |
| Q |
219 |
tccttctataccgatctaatgcagatttccattctcctatattctttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcata |
318 |
Q |
| |
|
|| || ||| | |||||||| | ||||||||| |||| |||||||||| ||||| |||||||||| ||||||| | || |||||||| |||||||| |
|
|
| T |
29272689 |
tcttttcatatccatctaatgtacccttccattcttctatcctctttccaaacaagttggaacccactatttctaaaactaagggaaggcccgaagcata |
29272788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 427 - 504
Target Start/End: Complemental strand, 16441179 - 16441102
Alignment:
| Q |
427 |
ttcatatgctctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggacc |
504 |
Q |
| |
|
|||||||| |||||||| |||||||||| |||||| ||| |||| ||||| |||| ||| ||||| ||||||||||| |
|
|
| T |
16441179 |
ttcatatgttctttcaaccccatgacttgctagcaactgtttgtcccgagttgtaatgataactctgctaccaggacc |
16441102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 16353696 - 16353779
Alignment:
| Q |
109 |
caatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaag |
192 |
Q |
| |
|
||||||| |||||| ||| |||||| ||||||| |||||||| |||| |||||||| ||||| | | || ||||||||||||| |
|
|
| T |
16353696 |
caatttacatccttcgaaacagcaagcaatgtcaagaaaaactttcttctcatcttcatccaaggaaacatagcttactttaag |
16353779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 320
Target Start/End: Complemental strand, 61046 - 60799
Alignment:
| Q |
73 |
accataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaa |
172 |
Q |
| |
|
|||||||| |||||||||||| |||| | | || | ||||| | ||||||||||| ||| ||||||| ||||| ||| | ||||| |||| ||||||| |
|
|
| T |
61046 |
accataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaa |
60947 |
T |
 |
| Q |
173 |
gcatcaaagcttactttaagtatctcctgtatctttttaatcggaatccttctataccgatctaatgcagatttccattctcctatattctttccaaata |
272 |
Q |
| |
|
| |||| |||| ||||||||||| || |||| |||| | |||||| || ||||| |||||||| | || |||||| |||| ||||||||||| | |
|
|
| T |
60946 |
gaatcatagctcactttaagtattctttggatctctttattgggaatcttttcataccaatctaatgtattcttgcattcttctatgttctttccaaaca |
60847 |
T |
 |
| Q |
273 |
agtttgaacccactacttctaaagccaatggaaggccagaagcataag |
320 |
Q |
| |
|
|||| |||||||||| ||||| | | | ||||||||||||||||||| |
|
|
| T |
60846 |
agttagaacccactatttctataactaccggaaggccagaagcataag |
60799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 615319 - 615163
Alignment:
| Q |
27 |
tgagagatttttcatccaacacactgatttgatatttcatgcagttaccataattagcatgaagtatatcttcaagttctttcaatttatatcctttgaa |
126 |
Q |
| |
|
||||||||||||| |||||||| | || |||| ||||||| | |||||||| |||||||||||| ||||||| | ||||||| |||||||||| |
|
|
| T |
615319 |
tgagagatttttccaccaacacattaatgtgatctttcatgatatcaccataatgagcatgaagtatttcttcaacccttgtcaatttccatcctttgaa |
615220 |
T |
 |
| Q |
127 |
gcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagct |
183 |
Q |
| |
|
||| ||| ||||||| ||||||||| || || ||||||| ||| ||||||||||| |
|
|
| T |
615219 |
gcaacaagcaatgtcaagaaaaacaaacttttcttctttctgcaaggcatcaaagct |
615163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 238605 - 238682
Alignment:
| Q |
108 |
tcaatttatatcctttgaagcagcaaccaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagctta |
185 |
Q |
| |
|
|||||||||||||||||||||| || ||||||| ||||||||| | | ||| |||| || ||||||||| |||||| |
|
|
| T |
238605 |
tcaatttatatcctttgaagcaacatgcaatgtcaagaaaaacaattttctcttcttcctgtaaagcatcatagctta |
238682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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