View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5540_low_9 (Length: 309)

Name: NF5540_low_9
Description: NF5540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5540_low_9
NF5540_low_9
[»] chr4 (32 HSPs)
chr4 (18-94)||(27886328-27886404)
chr4 (143-217)||(27886453-27886527)
chr4 (256-309)||(36955040-36955093)
chr4 (256-309)||(44745620-44745673)
chr4 (254-309)||(36584496-36584551)
chr4 (256-309)||(11650996-11651049)
chr4 (256-309)||(13613122-13613175)
chr4 (256-309)||(31581780-31581833)
chr4 (256-309)||(41832451-41832504)
chr4 (256-309)||(43564493-43564546)
chr4 (256-309)||(6755904-6755957)
chr4 (256-309)||(19653674-19653727)
chr4 (256-309)||(40228460-40228513)
chr4 (256-309)||(45670035-45670088)
chr4 (259-309)||(2654940-2654990)
chr4 (267-309)||(44817579-44817621)
chr4 (256-309)||(12700598-12700651)
chr4 (256-309)||(13233305-13233358)
chr4 (258-309)||(31664197-31664248)
chr4 (259-309)||(16925184-16925234)
chr4 (256-309)||(18491262-18491315)
chr4 (256-309)||(44134569-44134621)
chr4 (256-309)||(44134681-44134734)
chr4 (256-309)||(54795759-54795812)
chr4 (256-307)||(27270428-27270479)
chr4 (256-309)||(4632735-4632788)
chr4 (256-309)||(6756017-6756070)
chr4 (256-309)||(13613009-13613062)
chr4 (256-309)||(13857687-13857740)
chr4 (256-309)||(31664084-31664137)
chr4 (256-309)||(38141587-38141640)
chr4 (214-246)||(36584419-36584451)
[»] chr2 (32 HSPs)
chr2 (254-309)||(41699257-41699312)
chr2 (256-309)||(16194327-16194380)
chr2 (256-309)||(13615993-13616046)
chr2 (256-309)||(23869738-23869791)
chr2 (256-309)||(26293235-26293288)
chr2 (256-309)||(34983351-34983404)
chr2 (256-309)||(38763789-38763842)
chr2 (256-309)||(42016578-42016631)
chr2 (256-307)||(2249656-2249707)
chr2 (256-309)||(26860692-26860745)
chr2 (256-309)||(31392622-31392675)
chr2 (265-309)||(6750036-6750080)
chr2 (256-307)||(19283962-19284013)
chr2 (256-306)||(11764869-11764919)
chr2 (259-309)||(12995044-12995094)
chr2 (256-309)||(1021098-1021151)
chr2 (256-309)||(1115068-1115121)
chr2 (256-309)||(7366226-7366279)
chr2 (256-309)||(36436212-36436265)
chr2 (256-303)||(28745528-28745575)
chr2 (258-309)||(34494505-34494556)
chr2 (256-309)||(3836370-3836423)
chr2 (256-309)||(11935406-11935459)
chr2 (256-309)||(13615880-13615933)
chr2 (256-309)||(22674770-22674823)
chr2 (256-309)||(38527249-38527302)
chr2 (256-309)||(38763902-38763955)
chr2 (256-309)||(42016691-42016744)
chr2 (256-309)||(43471484-43471537)
chr2 (256-309)||(44545646-44545699)
chr2 (256-309)||(44545759-44545812)
chr2 (256-309)||(6749923-6749976)
[»] chr8 (32 HSPs)
chr8 (256-309)||(7242665-7242718)
chr8 (256-309)||(2317137-2317190)
chr8 (256-309)||(21434915-21434968)
chr8 (256-309)||(24797084-24797137)
chr8 (256-309)||(41837985-41838038)
chr8 (256-309)||(42556124-42556177)
chr8 (254-309)||(38567203-38567258)
chr8 (263-309)||(4697889-4697935)
chr8 (256-309)||(3886811-3886864)
chr8 (256-309)||(5590204-5590257)
chr8 (256-309)||(10092330-10092383)
chr8 (256-309)||(22658377-22658430)
chr8 (256-309)||(28564960-28565013)
chr8 (256-309)||(28572583-28572636)
chr8 (256-309)||(43117424-43117477)
chr8 (256-307)||(4231295-4231346)
chr8 (254-309)||(36060431-36060486)
chr8 (256-306)||(1183898-1183948)
chr8 (256-309)||(6316952-6317005)
chr8 (256-309)||(9830683-9830736)
chr8 (256-309)||(41388081-41388134)
chr8 (256-309)||(3659853-3659906)
chr8 (256-309)||(7012413-7012466)
chr8 (256-309)||(7242553-7242606)
chr8 (256-309)||(7413107-7413160)
chr8 (256-309)||(8996424-8996477)
chr8 (256-309)||(21435028-21435081)
chr8 (256-309)||(25642763-25642816)
chr8 (256-308)||(3886699-3886751)
chr8 (267-309)||(1098144-1098186)
chr8 (256-309)||(7422079-7422132)
chr8 (256-309)||(17836503-17836556)
[»] chr7 (28 HSPs)
chr7 (256-309)||(44468051-44468104)
chr7 (256-309)||(9624071-9624124)
chr7 (256-309)||(31428812-31428865)
chr7 (256-309)||(45350126-45350179)
chr7 (256-309)||(46027755-46027808)
chr7 (254-309)||(44142835-44142890)
chr7 (259-309)||(22723806-22723856)
chr7 (256-309)||(17166941-17166994)
chr7 (256-309)||(23469426-23469479)
chr7 (256-309)||(26873778-26873831)
chr7 (256-309)||(29075215-29075268)
chr7 (256-309)||(36675517-36675570)
chr7 (265-309)||(42241959-42242003)
chr7 (259-309)||(39976399-39976449)
chr7 (259-309)||(43859169-43859219)
chr7 (256-309)||(16834307-16834360)
chr7 (256-309)||(31065653-31065706)
chr7 (256-309)||(36358340-36358393)
chr7 (256-309)||(40055666-40055719)
chr7 (254-298)||(29502173-29502217)
chr7 (256-307)||(44724095-44724146)
chr7 (256-309)||(18104349-18104401)
chr7 (256-298)||(6961122-6961164)
chr7 (259-309)||(41367737-41367787)
chr7 (256-309)||(8727797-8727850)
chr7 (256-309)||(9624184-9624237)
chr7 (256-309)||(22566610-22566663)
chr7 (257-309)||(25174223-25174275)
[»] chr5 (23 HSPs)
chr5 (256-309)||(7440510-7440563)
chr5 (256-309)||(43348709-43348762)
chr5 (256-309)||(3631334-3631387)
chr5 (256-309)||(29390344-29390397)
chr5 (256-309)||(43358485-43358538)
chr5 (256-307)||(15374190-15374241)
chr5 (256-307)||(16823206-16823257)
chr5 (256-306)||(30772954-30773004)
chr5 (256-309)||(9737736-9737789)
chr5 (256-309)||(26525259-26525312)
chr5 (256-307)||(25701452-25701503)
chr5 (256-309)||(8074268-8074321)
chr5 (256-309)||(9596195-9596248)
chr5 (256-309)||(32304682-32304735)
chr5 (265-309)||(20656887-20656931)
chr5 (254-309)||(20487045-20487100)
chr5 (259-309)||(13084672-13084722)
chr5 (256-309)||(5844181-5844234)
chr5 (256-309)||(7440397-7440450)
chr5 (256-309)||(26297038-26297091)
chr5 (259-309)||(13013284-13013334)
chr5 (256-309)||(3631447-3631500)
chr5 (256-309)||(19577210-19577263)
[»] chr1 (28 HSPs)
chr1 (256-309)||(919739-919792)
chr1 (256-309)||(40428810-40428863)
chr1 (257-309)||(40567042-40567094)
chr1 (258-309)||(24790512-24790563)
chr1 (256-309)||(8086305-8086358)
chr1 (256-309)||(16692978-16693031)
chr1 (256-309)||(24544747-24544800)
chr1 (256-309)||(25299117-25299170)
chr1 (256-309)||(33012086-33012139)
chr1 (256-309)||(44052488-44052541)
chr1 (256-309)||(47561802-47561855)
chr1 (256-309)||(51139761-51139814)
chr1 (256-307)||(42372045-42372096)
chr1 (256-307)||(44317642-44317693)
chr1 (256-309)||(8530158-8530211)
chr1 (259-309)||(17285323-17285373)
chr1 (259-309)||(29170020-29170070)
chr1 (256-309)||(23177417-23177470)
chr1 (256-309)||(33011973-33012026)
chr1 (256-309)||(40567154-40567207)
chr1 (256-309)||(42372158-42372211)
chr1 (256-309)||(46224789-46224842)
chr1 (256-309)||(48708333-48708386)
chr1 (259-306)||(6849831-6849878)
chr1 (260-307)||(45836923-45836970)
chr1 (267-309)||(29981736-29981778)
chr1 (256-309)||(37125768-37125821)
chr1 (256-309)||(48708446-48708499)
[»] chr6 (16 HSPs)
chr6 (246-309)||(24130274-24130338)
chr6 (256-309)||(15469165-15469218)
chr6 (256-309)||(16461439-16461492)
chr6 (259-309)||(24635500-24635550)
chr6 (256-309)||(7021893-7021946)
chr6 (260-309)||(8560505-8560554)
chr6 (256-309)||(11450534-11450587)
chr6 (256-309)||(12698570-12698623)
chr6 (259-309)||(9079085-9079135)
chr6 (256-309)||(2660868-2660921)
chr6 (256-309)||(34127573-34127626)
chr6 (256-309)||(34127686-34127739)
chr6 (256-307)||(34023574-34023625)
chr6 (260-306)||(23259101-23259147)
chr6 (256-309)||(13405393-13405446)
chr6 (256-309)||(26468524-26468577)
[»] scaffold0014 (1 HSPs)
scaffold0014 (256-309)||(65009-65062)
[»] scaffold0002 (1 HSPs)
scaffold0002 (256-309)||(331847-331900)
[»] chr3 (28 HSPs)
chr3 (256-309)||(1092908-1092961)
chr3 (256-309)||(11232185-11232238)
chr3 (256-309)||(28952422-28952475)
chr3 (256-307)||(29126076-29126127)
chr3 (256-306)||(44254634-44254684)
chr3 (256-309)||(22729295-22729348)
chr3 (256-309)||(27742561-27742614)
chr3 (256-309)||(32270950-32271003)
chr3 (256-309)||(50527664-50527717)
chr3 (256-309)||(52202057-52202110)
chr3 (265-309)||(35083877-35083921)
chr3 (256-306)||(13594907-13594957)
chr3 (256-309)||(18163793-18163846)
chr3 (256-308)||(49169868-49169920)
chr3 (256-306)||(21259468-21259518)
chr3 (256-309)||(44205487-44205541)
chr3 (267-309)||(52571455-52571497)
chr3 (256-309)||(4618226-4618278)
chr3 (256-309)||(13594791-13594844)
chr3 (256-309)||(35083981-35084034)
chr3 (267-309)||(31174590-31174632)
chr3 (267-309)||(49657242-49657284)
chr3 (217-246)||(7160422-7160451)
chr3 (256-309)||(12251538-12251591)
chr3 (213-246)||(28952523-28952556)
chr3 (256-309)||(36633562-36633615)
chr3 (256-293)||(52499244-52499281)
chr3 (256-308)||(27742674-27742726)
[»] scaffold0131 (1 HSPs)
scaffold0131 (256-309)||(11253-11306)
[»] scaffold0050 (1 HSPs)
scaffold0050 (256-309)||(19121-19174)
[»] scaffold0978 (1 HSPs)
scaffold0978 (265-309)||(1188-1232)


Alignment Details
Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 27886328 - 27886404
Alignment:
Q  18 caaatatcagtcatataacaagtttaaatggtataaattacggagataccttagtagagtggatttcctaccgtgga 94  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27886328 caaatatcagtcatatagcaagtttaaatggtctaaattacggagataccttagtagagtggatttcctaccgtgga 27886404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 27886453 - 27886527
Alignment:
Q  143 atatgttgagatttcaccgggtcctccattcattctagaggattcaatcatgataccttattgcatctacaagag 217  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27886453 atatgttgcgatttcactgggtcctccattcattctagaggattcaatcatgataccttattgcatttacaagag 27886527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 36955093 - 36955040
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36955093 tattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 36955040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 44745673 - 44745620
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44745673 tattttgcaagattttatgcaattttgtgtcggttttatgttttggttgatcca 44745620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 36584496 - 36584551
Alignment:
Q  254 tatattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  36584496 tatattttgcgagattttatgcaattttgtgttagttttatgttttggttgatcca 36584551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 11651049 - 11650996
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  11651049 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 11650996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 13613175 - 13613122
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  13613175 tattttgcgagattttatgcaattttgtgttggttttatattttggttgatcca 13613122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 31581833 - 31581780
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  31581833 tattttgctagattttatgcaattttgtgtcggttttatgttttggttgatcca 31581780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 41832451 - 41832504
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  41832451 tattttgcaagattttatgcaattttatgtcggttttatgttttggttgatcca 41832504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 43564493 - 43564546
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  43564493 tattttgcgatattttatgcaattttgtgttggttttatgttttggttgatcca 43564546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 6755904 - 6755957
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||    
T  6755904 tattttgcgagattttatgcaattttgtgttgtttttatgtttttgttgatcca 6755957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 19653727 - 19653674
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  19653727 tattttgttagattttatgcaattttgtgtcggttttatgttttggttgatcca 19653674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 40228513 - 40228460
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||    
T  40228513 tattttgcgagattttatgcaattttgtgtcggttttatgctttggttgatcca 40228460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 45670035 - 45670088
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  45670035 tattttgcgagattttatgtaattttgtgtcggttttatgttttggttgatcca 45670088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 2654990 - 2654940
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  2654990 tttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 2654940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 44817621 - 44817579
Alignment:
Q  267 attttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  44817621 attttatgcaattttgtgtcggttttatgttttggttgatcca 44817579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 12700651 - 12700598
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||| ||||||||||||||||| | |||||||||||||||||||||    
T  12700651 tattttgcgagactttatgcaattttgtgtcgattttatgttttggttgatcca 12700598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 13233305 - 13233358
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | ||||||||||||||||| | |||||||||||||||||||||||    
T  13233305 tattttgcgatattttatgcaattttgtatcggttttatgttttggttgatcca 13233358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 31664248 - 31664197
Alignment:
Q  258 ttttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| |||||||||||||||||| || ||||||||| |||||||||||||    
T  31664248 ttttgcgagattttatgcaattttgagtcggttttatgatttggttgatcca 31664197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 16925184 - 16925234
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||| ||||||||||||||| | |||||||||||||||||||||||    
T  16925184 tttgcgagactttatgcaattttgtatcggttttatgttttggttgatcca 16925234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 18491262 - 18491315
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  |||||||||| |||||| ||| |||||||||||||||||||||||    
T  18491262 tattttgtgagattttatgtaattttatgtcggttttatgttttggttgatcca 18491315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 44134569 - 44134621
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||| | |||||||||||||||||||||||||    
T  44134569 tattttgtgagattttatgcaatttt-tattggttttatgttttggttgatcca 44134621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 44134681 - 44134734
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  44134681 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcca 44134734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 54795812 - 54795759
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||| ||||||||    
T  54795812 tattttgcaagattttatacaattttgtgtcggttttagattttgattgatcca 54795759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 27270428 - 27270479
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||||| ||||||    
T  27270428 tattttgcgagattttatacaattttgtgtcggttttaggttttgattgatc 27270479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 4632788 - 4632735
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| |||||||||||| ||||||  ||| ||||||||||    
T  4632788 tattttgcgagattttatacaattttgtgttagttttagatttcggttgatcca 4632735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 6756017 - 6756070
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| | ||||| ||| |||||||||||| ||||||||||    
T  6756017 tattttgcgagattttatactattttatgtcggttttatgtttcggttgatcca 6756070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 13613062 - 13613009
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  13613062 tattttccgagattttatacaattttatgtcggttttaggttttggttgatcca 13613009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 13857687 - 13857740
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||| ||||||||||||||||||| |||| || |||||||    
T  13857687 tattttgtgagattttatacaattttgtgttggttttaagtttcggctgatcca 13857740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 31664137 - 31664084
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||  |||||| ||| ||||||| |||| ||||||||||    
T  31664137 tattttgcaagattttataaaattttatgtcggttttaggtttcggttgatcca 31664084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 38141640 - 38141587
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| |   ||||||||||| |||||||||    
T  38141640 tattttgcgagattttatgcaattttgtatcaattttatgtttttgttgatcca 38141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 36584419 - 36584451
Alignment:
Q  214 agagcagtggcggagcctttcatgggctggggt 246  Q
    ||||||||||||||||| |||||||||||||||    
T  36584419 agagcagtggcggagcccttcatgggctggggt 36584451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 41699257 - 41699312
Alignment:
Q  254 tatattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41699257 tatattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 41699312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 16194327 - 16194380
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16194327 tattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 16194380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 13616046 - 13615993
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  13616046 tattttgcgagattttatgcaattttgtgttgtttttatgttttggttgatcca 13615993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 23869738 - 23869791
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  23869738 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 23869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 26293235 - 26293288
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  26293235 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 26293288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 34983351 - 34983404
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  34983351 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 34983404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 38763789 - 38763842
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  38763789 tatttagcgagattttatgcaattttgtgttggttttatgttttggttgatcca 38763842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 42016578 - 42016631
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  42016578 tattttgtgagattttatgcaattttgtgttggttttatgttttggttgatcca 42016631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 2249656 - 2249707
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  2249656 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatc 2249707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 26860745 - 26860692
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  26860745 tattttgcgagattttatgcaatttcgtgtcggttttatgttttggttgatcca 26860692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 31392622 - 31392675
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  31392622 tattttgttagattttatgcaattttgtgtcggttttatgttttggttgatcca 31392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 6750080 - 6750036
Alignment:
Q  265 agattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  6750080 agattttatgcaattttgtgttggttttatgttttgattgatcca 6750036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 19284013 - 19283962
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  19284013 tattttgcgagattttatgcaattttgtatcggttttatgttttggttgatc 19283962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 11764869 - 11764919
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  11764869 tattttgcaagattttatacaactttgtgtcggttttatgttttggttgat 11764919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 12995044 - 12995094
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  12995044 tttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 12995094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 1021151 - 1021098
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||    
T  1021151 tattttgcgagattttatacaattttgtgtcggttttatgatttggttgatcca 1021098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 1115121 - 1115068
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||    
T  1115121 tattttgcgagattttatacaattttgtgtcggttttatgatttggttgatcca 1115068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 7366226 - 7366279
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||  ||||||||||||| ||||||||    
T  7366226 tattttgcgagattttatgcaattttgtgtgagttttatgttttgcttgatcca 7366279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 36436265 - 36436212
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | ||||||||||||||||||| |||||||||||||| ||||||||    
T  36436265 tattttgcgatattttatgcaattttgtgtcggttttatgttttgcttgatcca 36436212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 28745575 - 28745528
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggtt 303  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||    
T  28745575 tattttgcgagattttatgcaattttgtgtcgattttatgttttggtt 28745528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 34494556 - 34494505
Alignment:
Q  258 ttttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| ||||||||||||||||||| | ||||||||||||| |||||||||    
T  34494556 ttttgcgagattttatgcaattttgtatcggttttatgtttttgttgatcca 34494505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 3836423 - 3836370
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||| ||||||||||| ||||||| |||||||||||||||    
T  3836423 tattttacgagattttatacaattttgtgtcggttttaggttttggttgatcca 3836370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 11935459 - 11935406
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| |||||||  ||||||||||||||    
T  11935459 tattttgcgagattttatacaattttgtgtcggttttagattttggttgatcca 11935406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 13615933 - 13615880
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  13615933 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcca 13615880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 22674823 - 22674770
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| ||||||| |||| || |||||||    
T  22674823 tattttgcgagattttatgcaattttgtgtcggttttaggtttcggctgatcca 22674770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 38527249 - 38527302
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||||| | |||||||||| ||||||||||||    
T  38527249 tattttgtgagattttatgcaattttgtatcggttttatgtcttggttgatcca 38527302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 38763902 - 38763955
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  38763902 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcca 38763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 42016691 - 42016744
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  42016691 tattttgcgagattttatacaattttatgtcggttttaagttttggttgatcca 42016744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 43471537 - 43471484
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||||| ||||||||    
T  43471537 tattttgcgagattttatacaattttgtgtcggttttaggttttgattgatcca 43471484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 44545699 - 44545646
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||||||||||| |||| ||||||||||    
T  44545699 tattttgcgagattttatacaattttatgttggttttaagtttcggttgatcca 44545646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 44545812 - 44545759
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | ||||||| ||||||||||| |||||||| ||||||||||||||    
T  44545812 tattttgcgatattttatacaattttgtgtcggttttatattttggttgatcca 44545759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 6749976 - 6749923
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | ||||||| ||||||| ||| ||||||| |||||||||||||||    
T  6749976 tattttgcgatattttatacaattttatgtcggttttaggttttggttgatcca 6749923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 7242718 - 7242665
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7242718 tattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 7242665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 2317137 - 2317190
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  2317137 tattttgcgagattttatacaattttgtgttggttttatgttttggttgatcca 2317190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 21434915 - 21434968
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  21434915 tattttgcgaggttttatgcaattttgtgttggttttatgttttggttgatcca 21434968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 24797137 - 24797084
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  24797137 tattttgcaagattttatgcaattttgtatcggttttatgttttggttgatcca 24797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 41838038 - 41837985
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  41838038 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 41837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 42556177 - 42556124
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  42556177 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 42556124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 38567203 - 38567258
Alignment:
Q  254 tatattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||    
T  38567203 tatattttgcgagattttatgcaattttgtgttgattttatgtttttgttgatcca 38567258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 4697889 - 4697935
Alignment:
Q  263 caagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4697889 caagattttatgcaattttgtgtcggttttatgttttggttgatcca 4697935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 3886864 - 3886811
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  3886864 tattttgcgagattttatgcaattttgtgtcgattttatgttttggttgatcca 3886811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 5590257 - 5590204
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  5590257 tatttttcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 5590204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 10092330 - 10092383
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  10092330 tattttgcgagattttatgcaattttgtgttggttttttgttttagttgatcca 10092383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 22658430 - 22658377
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  22658430 tattttgcgagattttatgcaattttgtgtcggttttatgttttgattgatcca 22658377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 28564960 - 28565013
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  28564960 tattttgcgagattttatgcaattttgtgtcagttttatgttttggttgatcca 28565013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 28572583 - 28572636
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  28572583 tattttgcgagattttatgcaattttgtgtcagttttatgttttggttgatcca 28572636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 43117424 - 43117477
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  43117424 tattttgcgagattttatacaattttgtgtcggttttatgttttggttgatcca 43117477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 4231295 - 4231346
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  4231295 tattttacgagattttatgcaattttgtgtcggttttatgttttggttgatc 4231346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 36060431 - 36060486
Alignment:
Q  254 tatattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||| |||||||||||||||||||||   |||||||||||||||||||||    
T  36060431 tatattttgcgagattttatgcaattttgtgtcaattttatgttttggttgatcca 36060486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 1183898 - 1183948
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  1183898 tattttgcgagattttatgcaattttgtatcggttttatgttttggttgat 1183948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 6316952 - 6317005
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||||||| | |||||||||||||||||||||    
T  6316952 tattttgtgagattttatgcaattttgtgtcgattttatgttttggttgatcca 6317005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 9830683 - 9830736
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||| ||||||| | |||||||||||||||||||||    
T  9830683 tattttgcgagattttatgcaactttgtgtcgattttatgttttggttgatcca 9830736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 41388081 - 41388134
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||    
T  41388081 tattttgcaagattttatacaattttgtgtcggttttatgatttggtttatcca 41388134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 3659906 - 3659853
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||  | |||| |||||||||||||||    
T  3659906 tattttgcgagattttatgcaattttgtgtcaggtttacgttttggttgatcca 3659853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 7012413 - 7012466
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | || |||||||||||||| | |||||||||||||||||||||||    
T  7012413 tattttgcgatatcttatgcaattttgtatcggttttatgttttggttgatcca 7012466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 7242606 - 7242553
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  7242606 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcca 7242553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 7413107 - 7413160
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||||| ||||||||    
T  7413107 tattttgcgagattttatacaattttgtgtcggttttaggttttgattgatcca 7413160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 8996424 - 8996477
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  8996424 tattttacgagattttatgcaattttgtgtcggttttaagtttaggttgatcca 8996477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 21435028 - 21435081
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  21435028 tattttgctagattttatacaattttatgtcggttttaggttttggttgatcca 21435081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 25642816 - 25642763
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||  |||||||||| ||||||| |||||||||||||||    
T  25642816 tattttgcgagattttatataattttgtgtcggttttaggttttggttgatcca 25642763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 3886751 - 3886699
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcc 308  Q
    |||||||| ||||||||| ||||||| ||| ||||||| ||||||||||||||    
T  3886751 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcc 3886699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 1098144 - 1098186
Alignment:
Q  267 attttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  1098144 attttatgcaattttgtatcagttttatgttttggttgatcca 1098186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 7422132 - 7422079
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| |||||||  ||| ||||||||||    
T  7422132 tattttgcgagattttatacaattttgtgtcggttttagatttcggttgatcca 7422079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 17836503 - 17836556
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||| || |||||||    
T  17836503 tattttgtaagattttatacaattttgtgtcggttttaggtttcgggtgatcca 17836556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 44468104 - 44468051
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44468104 tattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 44468051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 9624071 - 9624124
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  9624071 tattttgcgagattttatgcaattttgtgttggttttatattttggttgatcca 9624124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 31428812 - 31428865
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  31428812 tattttgcaagattttatgcaattttgtgtcggttttatgttttgattgatcca 31428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 45350126 - 45350179
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  45350126 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 45350179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 46027755 - 46027808
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  46027755 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 46027808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 44142835 - 44142890
Alignment:
Q  254 tatattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  44142835 tatattttgcgagattttatgcaattttgtgttggttttatgttttctttgatcca 44142890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 22723856 - 22723806
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  22723856 tttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 22723806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 17166941 - 17166994
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  17166941 tattttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 17166994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 23469479 - 23469426
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  23469479 tattttgcgagattttatgcaattttgtgtcggttttatattttggttgatcca 23469426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 26873778 - 26873831
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  26873778 tattttgcgagattttatacaattttgtgtcggttttatgttttggttgatcca 26873831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 29075268 - 29075215
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  29075268 tattttgcgatattttatgcaattttgtgtcggttttatgttttggttgatcca 29075215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 36675570 - 36675517
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  36675570 tattttgtgagattttatgcaattttgtgtcggttttatgttttggttgatcca 36675517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 42242003 - 42241959
Alignment:
Q  265 agattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  42242003 agattttatgcaattttgtgtcggttttatgttttggttgatcca 42241959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 39976399 - 39976449
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  39976399 tttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 39976449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 43859169 - 43859219
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  43859169 tttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 43859219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 16834360 - 16834307
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||| || |||||||||||||||||||  ||||||||||||||||||||||    
T  16834360 tattttgtaaaattttatgcaattttgtgtcagttttatgttttggttgatcca 16834307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 31065706 - 31065653
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||| |||||    
T  31065706 tattttacgagattttatgcaattttgtgtcggttttatgttttggttaatcca 31065653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 36358393 - 36358340
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | ||||||||||||||||| | |||||||||||||||||||||||    
T  36358393 tattttgcgacattttatgcaattttgtatcggttttatgttttggttgatcca 36358340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 40055666 - 40055719
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| | |||| ||||||||||||||||||    
T  40055666 tattttgcgagattttatgcaattttgtatcggttgtatgttttggttgatcca 40055719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 29502217 - 29502173
Alignment:
Q  254 tatattttgcaagattttatgcaattttgtgttggttttatgttt 298  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  29502217 tatattttgcaagattttattcaattttgtgttggttttaggttt 29502173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 44724146 - 44724095
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||  ||||||||| ||||||||||| |||||||||||||||||||||    
T  44724146 tattttgagagattttatacaattttgtgtcggttttatgttttggttgatc 44724095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 18104401 - 18104349
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||| |||||||||||||| ||||| |||||||||||||||||    
T  18104401 tattttgcgagattt-atgcaattttgtgtcggtttcatgttttggttgatcca 18104349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 6961122 - 6961164
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttt 298  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||    
T  6961122 tattttgcaagattttatacaattttgtgtcggttttaggttt 6961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 41367737 - 41367787
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | | |||||| ||||||||||||||    
T  41367737 tttgcgagattttatgcaattttgtatcgattttatattttggttgatcca 41367787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 8727797 - 8727850
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| ||||||||||||  ||||||||||| |||||||||| || |||||||    
T  8727797 tattttacaagattttatgtcattttgtgttgattttatgtttcggctgatcca 8727850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 9624184 - 9624237
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  9624184 tattttccgagattttatacaattttatgtcggttttaggttttggttgatcca 9624237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 22566663 - 22566610
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||| || |||||||    
T  22566663 tattttgcgagattttatacaattttgtgtcggttttaagtttcggctgatcca 22566610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 25174223 - 25174275
Alignment:
Q  257 attttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||| |||||||||  |||| ||||||||||||| |||| ||||||||||    
T  25174223 attttgcgagattttatataattatgtgttggttttaggtttcggttgatcca 25174275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 7440563 - 7440510
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7440563 tattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 7440510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 43348709 - 43348762
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43348709 tattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 43348762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 3631334 - 3631387
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  3631334 tattttgcgagattttatgcaattttgtgttggttttatgttttagttgatcca 3631387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 29390344 - 29390397
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  29390344 tattttacgagattttatgcaattttgtgttggttttatgttttggttgatcca 29390397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 43358485 - 43358538
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  43358485 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 43358538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 15374190 - 15374241
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  15374190 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatc 15374241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 16823206 - 16823257
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  16823206 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatc 16823257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 30772954 - 30773004
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  30772954 tattttgcaagattttatgcaattttgtatcggttttatgttttggttgat 30773004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 9737789 - 9737736
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  9737789 tattttgcgagattttatgcaattttgtgtcggttttatgtttttgttgatcca 9737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 26525312 - 26525259
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  26525312 tattttgcgagattttttgcaattttgtgtcggttttatgttttggttgatcca 26525259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 25701503 - 25701452
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  25701503 tattttgcaagattttatgtaattttgtatcggttttatgttttggttgatc 25701452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 8074321 - 8074268
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||    
T  8074321 tattttgcgagattttatacaattttgtgtcggttttaggttttggttgatcca 8074268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 9596248 - 9596195
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||| |||| |||||||||    
T  9596248 tattttgcgagattttatgcaattttgtgtcggttttatattttagttgatcca 9596195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 32304735 - 32304682
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||||||||||||||| |||||||| ||||||||||||||    
T  32304735 tattttacgagattttatgcaattttgtgtcggttttatattttggttgatcca 32304682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 20656931 - 20656887
Alignment:
Q  265 agattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  20656931 agattttatgcaattttgtatcggttttatgttttggttgatcca 20656887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 20487045 - 20487100
Alignment:
Q  254 tatattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||    
T  20487045 tatattttgcaagattttatacaattttgtgtcggttttaggtttcggctgatcca 20487100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 13084722 - 13084672
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | | |||||||||||||||||||||    
T  13084722 tttgcgagattttatgcaattttgtatcgattttatgttttggttgatcca 13084672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 5844181 - 5844234
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | |||||||||||||||| |||| | |||||||||||||||||||||    
T  5844181 tattttactagattttatgcaatttggtgtcgattttatgttttggttgatcca 5844234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 7440450 - 7440397
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  7440450 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcca 7440397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 26297091 - 26297038
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||| ||||  |||||||||| ||||||| |||||||||||||||    
T  26297091 tattttgcaagatcttatataattttgtgtcggttttaggttttggttgatcca 26297038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 13013334 - 13013284
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| |||||||| |||||||||| |  ||||||||||||||||||||||    
T  13013334 tttgcgagattttaagcaattttgtatcagttttatgttttggttgatcca 13013284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 3631447 - 3631500
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| | ||||| |||||||||||||||    
T  3631447 tattttgcgagattttatacaattttatgtcgattttaagttttggttgatcca 3631500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 19577263 - 19577210
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||| ||||||| ||||||||||| |||| ||  ||||||||||||||    
T  19577263 tattttgcaacattttatacaattttgtgtcggttctagattttggttgatcca 19577210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 919792 - 919739
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  919792 tattttgcgagattttatgcaattttgtgttggttttatgttttggttgatcca 919739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 40428863 - 40428810
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  40428863 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 40428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 40567042 - 40567094
Alignment:
Q  257 attttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  40567042 attttgcgagattttatgcaattttgtgttggttttatgttttagttgatcca 40567094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 24790512 - 24790563
Alignment:
Q  258 ttttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  24790512 ttttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 24790563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 8086305 - 8086358
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||    
T  8086305 tattttgctagattttatgcaattttatgtaggttttatgttttggttgatcca 8086358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 16693031 - 16692978
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  16693031 tattttacgagattttatgcaattttgtgtcggttttatgttttggttgatcca 16692978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 24544800 - 24544747
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||    
T  24544800 tattttgcgagattttatgcaattttgtgtcggttttatgctttggttgatcca 24544747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 25299170 - 25299117
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  25299170 tattttgcgagattttatgcaactttgtgtcggttttatgttttggttgatcca 25299117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 33012139 - 33012086
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  33012139 tattttgtgagattttatgcaattttgtgtcggttttatgttttggttgatcca 33012086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 44052541 - 44052488
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  44052541 tattttgcgagattttatgtaattttgtgttggttttatgttttgattgatcca 44052488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 47561802 - 47561855
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  47561802 tattttgcgatattttatgcaattttgtgtaggttttatgttttggttgatcca 47561855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 51139761 - 51139814
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  51139761 tattttgcgagattttatacaattttgtgtcggttttatgttttggttgatcca 51139814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 42372045 - 42372096
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  42372045 tattttgtgagattttatgcaattttgtgtcggttttatgttttggttgatc 42372096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 44317642 - 44317693
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  44317642 tattttgcgagattttatgtaattttgtgttgattttatgttttggttgatc 44317693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 8530158 - 8530211
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| | ||||||||| |||||||||||    
T  8530158 tattttgcgagattttatgcaattttgtgtcgattttatgttctggttgatcca 8530211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 17285373 - 17285323
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||| | | |||||||||||||||||||||||    
T  17285373 tttgcgagattttatgcaattttatatcggttttatgttttggttgatcca 17285323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 29170020 - 29170070
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | | |||||||||||||||||||||    
T  29170020 tttgcgagattttatgcaattttgtatcgattttatgttttggttgatcca 29170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 23177417 - 23177470
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| | | |||||| ||||||||||||||    
T  23177417 tattttgcgagattttatgcaattttgtatcgattttatattttggttgatcca 23177470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 33012026 - 33011973
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||| ||| ||||||| |||| ||||||||||    
T  33012026 tattttgcgagattttatgcaattttatgtcggttttaggtttcggttgatcca 33011973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 40567154 - 40567207
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  40567154 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcca 40567207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 42372158 - 42372211
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||||||||||| |||| ||||||||||    
T  42372158 tattttgcgagattttatacaattttatgttggttttaggtttcggttgatcca 42372211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 46224842 - 46224789
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| | | ||||||||||| |||||||||    
T  46224842 tattttgcgagattttatgcaattttgtatcgattttatgtttttgttgatcca 46224789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 48708386 - 48708333
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  48708386 tattttgcgagattttatacaattttatgtcggttttaggttttggttgatcca 48708333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 6849831 - 6849878
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||||||||    
T  6849831 tttgcgagattttatacaattttgtatcggttttatgttttggttgat 6849878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 45836923 - 45836970
Alignment:
Q  260 ttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||| ||||||||| ||||||||| | |||||||||||||||||||||    
T  45836923 ttgcgagattttatacaattttgtatcggttttatgttttggttgatc 45836970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 29981778 - 29981736
Alignment:
Q  267 attttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||    
T  29981778 attttatgcaattttgtgtcggttttaagttttggtttatcca 29981736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 37125768 - 37125821
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| | |||||||||||||||| ||  |||||| |||||||||||||||    
T  37125768 tattttgcgatattttatgcaattttgcgtcagttttacgttttggttgatcca 37125821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 48708499 - 48708446
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||| | | | ||||||||||| |||||||||    
T  48708499 tattttgcgagattttatgcaattttatatcgattttatgtttttgttgatcca 48708446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 24130338 - 24130274
Alignment:
Q  246 tcaacgattata-ttttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  24130338 tcaacgattataattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 24130274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 15469165 - 15469218
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  15469165 tattttgcaagattttatgcaattttgtgtcggttttatgttttgattgatcca 15469218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 16461492 - 16461439
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  16461492 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 16461439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 24635550 - 24635500
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  24635550 tttgcgagattttatgcaattttgtattggttttatgttttggttgatcca 24635500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 7021893 - 7021946
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  7021893 tattttgcgagattttatgcaattttgtgtcagttttatgttttggttgatcca 7021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 8560505 - 8560554
Alignment:
Q  260 ttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  8560505 ttgcgagattttatgcaattttgtattggttttatgttttggttgatcca 8560554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 11450587 - 11450534
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  11450587 tattttgcgagatcttatgcaattttgtgtcggttttatgttttggttgatcca 11450534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 12698570 - 12698623
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  12698570 tattttgcgagattttatacaattttgtgtcggttttatgttttggttgatcca 12698623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 9079135 - 9079085
Alignment:
Q  259 tttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  9079135 tttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 9079085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 2660921 - 2660868
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||| |||||||    
T  2660921 tattttgcgagattttatgcaattttgtatcggttttatgttttggatgatcca 2660868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 34127573 - 34127626
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||| | ||||||||| |||||||||||||    
T  34127573 tattttgcgagattttatacaattttgtatcggttttatgatttggttgatcca 34127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 34127686 - 34127739
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||| ||||||||||    
T  34127686 tattttgcaagattttatacaattttatgtcggttttaggtttcggttgatcca 34127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 34023625 - 34023574
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||| | |||||||||  |||||||||| |||||||||||||||||||||    
T  34023625 tattttacgagattttatataattttgtgtcggttttatgttttggttgatc 34023574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 23259147 - 23259101
Alignment:
Q  260 ttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    |||| ||||||||||||||||| | | ||||||||||||||||||||    
T  23259147 ttgcgagattttatgcaattttctatcggttttatgttttggttgat 23259101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 13405446 - 13405393
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||| | ||||||||    
T  13405446 tattttgcgagattttatacaattttgtgtcggttttaggtttcgattgatcca 13405393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 26468524 - 26468577
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| ||||||||  |||| ||||||||    
T  26468524 tattttgcgagattttatacaattttgtgtcggttttataatttgcttgatcca 26468577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 65009 - 65062
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  65009 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 65062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 331847 - 331900
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  331847 tattttgcaagattttatgcaattttgtatcggttttatgttttggttgatcca 331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 1092961 - 1092908
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  1092961 tattttgcgagattttatgcaattttgtgtgggttttatgttttggttgatcca 1092908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 11232238 - 11232185
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  11232238 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 11232185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 28952475 - 28952422
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  28952475 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 28952422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 29126127 - 29126076
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatc 307  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  29126127 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatc 29126076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 44254684 - 44254634
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  44254684 tattttgcgagattttatgcaattttgtgtcggttttatgttttggttgat 44254634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 22729295 - 22729348
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  22729295 tatttttcgagattttatgcaattttgtgtcggttttatgttttggttgatcca 22729348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 27742561 - 27742614
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  27742561 tattttgagagattttatgcaattttgtgtcggttttatgttttggttgatcca 27742614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 32271003 - 32270950
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  32271003 tattttgcgagattttatgcaattttgtgtcggttttatattttggttgatcca 32270950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 50527717 - 50527664
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  50527717 tattttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 50527664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 52202057 - 52202110
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  52202057 tattttgcgagattttatacaattttgtgtcggttttatgttttggttgatcca 52202110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 35083877 - 35083921
Alignment:
Q  265 agattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  35083877 agattttatgcaattttgtgtcggttttatgttttggttgatcca 35083921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 13594957 - 13594907
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  13594957 tattttgcgagattttatgcaattttgtgtcggttttatgttttggctgat 13594907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 18163793 - 18163846
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||||| | |||||||||||||||||||||||    
T  18163793 tattttgcgagattttattcaattttgtatcggttttatgttttggttgatcca 18163846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 49169868 - 49169920
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcc 308  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||||||||    
T  49169868 tattttgcgaaattttatacaattttgtgtcggttttatgttttggttgatcc 49169920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 21259518 - 21259468
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgat 306  Q
    |||||||  ||||||||||||||||||||| | ||||||||||||||||||    
T  21259518 tattttgtgagattttatgcaattttgtgtcgattttatgttttggttgat 21259468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 44205487 - 44205541
Alignment:
Q  256 tattttgcaagattttatgcaatttt-gtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||    
T  44205487 tattttgcgagattttatgcaatttttgtgtcggttttatgtgttggttgatcca 44205541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 52571497 - 52571455
Alignment:
Q  267 attttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  52571497 attttatgcaattttgtatcggttttatgttttggttgatcca 52571455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 4618226 - 4618278
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||||| ||||||||||| |||||||| |||| |||||||||    
T  4618226 tattttgcaagattttatacaattttgtgtcggttttat-tttttgttgatcca 4618278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 13594844 - 13594791
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||| |||||||||||| ||||||||||    
T  13594844 tattttgcgagattttatacaattttatgtcggttttatgtttcggttgatcca 13594791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 35083981 - 35084034
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||| ||||||| ||||||||||| |||| ||||||||||    
T  35083981 tattttgcgagattttatacaattttatgttggttttaggtttcggttgatcca 35084034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 31174632 - 31174590
Alignment:
Q  267 attttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||    
T  31174632 attttatacaattttgtgtcggttttaggttttggttgatcca 31174590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 49657284 - 49657242
Alignment:
Q  267 attttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||||||||||  || |||||||||||||||||||||||    
T  49657284 attttatgcaattttacgtcggttttatgttttggttgatcca 49657242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 246
Target Start/End: Complemental strand, 7160451 - 7160422
Alignment:
Q  217 gcagtggcggagcctttcatgggctggggt 246  Q
    ||||||||||||||||||||||||||||||    
T  7160451 gcagtggcggagcctttcatgggctggggt 7160422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 12251591 - 12251538
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  |||||||||  |||||||||| | |||||||||||||||||||||    
T  12251591 tattttgtgagattttatataattttgtgtcgattttatgttttggttgatcca 12251538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 28952556 - 28952523
Alignment:
Q  213 aagagcagtggcggagcctttcatgggctggggt 246  Q
    |||||||||||||||||| |||||||||||||||    
T  28952556 aagagcagtggcggagcccttcatgggctggggt 28952523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 36633562 - 36633615
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||  ||||||||| ||||||||| | | |||||||||||||||||||||    
T  36633562 tattttgtgagattttatacaattttgtatcgattttatgttttggttgatcca 36633615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 52499281 - 52499244
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggtttta 293  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  52499281 tattttgcgagattttatacaattttgtgttggtttta 52499244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 27742674 - 27742726
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcc 308  Q
    |||||||||||||||||| ||||||| ||| | ||||| |||| |||||||||    
T  27742674 tattttgcaagattttatacaattttatgtcgtttttaggtttcggttgatcc 27742726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 11253 - 11306
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  11253 tattttgcgagattttatgcaattttgtatcggttttatgttttggttgatcca 11306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 19121 - 19174
Alignment:
Q  256 tattttgcaagattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  19121 tattttgcgagattttatgcaattttgtgtcggttttatgttttggtttatcca 19174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 1188 - 1232
Alignment:
Q  265 agattttatgcaattttgtgttggttttatgttttggttgatcca 309  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  1188 agattttatgcaattttgtgtcgattttatgttttggttgatcca 1232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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