View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5547-Insertion-1 (Length: 362)

Name: NF5547-Insertion-1
Description: NF5547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5547-Insertion-1
NF5547-Insertion-1
[»] chr3 (78 HSPs)
chr3 (135-362)||(30232016-30232243)
chr3 (8-132)||(30232312-30232436)
chr3 (13-114)||(14186648-14186748)
chr3 (8-115)||(10499079-10499186)
chr3 (8-114)||(51903848-51903954)
chr3 (35-116)||(30311304-30311385)
chr3 (27-115)||(5499396-5499484)
chr3 (27-111)||(53412948-53413032)
chr3 (8-107)||(4844481-4844580)
chr3 (8-107)||(4870177-4870276)
chr3 (13-116)||(8051212-8051315)
chr3 (8-115)||(31520575-31520682)
chr3 (13-116)||(36720379-36720482)
chr3 (8-114)||(14339610-14339716)
chr3 (29-114)||(4222141-4222226)
chr3 (34-115)||(46518627-46518708)
chr3 (27-115)||(27093350-27093438)
chr3 (12-96)||(44069776-44069860)
chr3 (12-107)||(2667869-2667964)
chr3 (27-114)||(16354881-16354968)
chr3 (8-98)||(47236941-47237031)
chr3 (15-113)||(47454594-47454692)
chr3 (27-115)||(15048050-15048138)
chr3 (34-114)||(21960551-21960631)
chr3 (38-114)||(27923043-27923119)
chr3 (28-114)||(10445129-10445216)
chr3 (27-114)||(28703393-28703480)
chr3 (34-97)||(29563917-29563980)
chr3 (12-114)||(47810718-47810820)
chr3 (8-106)||(11612307-11612405)
chr3 (8-114)||(16991542-16991648)
chr3 (33-115)||(34844370-34844451)
chr3 (34-111)||(13808881-13808958)
chr3 (36-111)||(17034991-17035064)
chr3 (8-112)||(19716199-19716303)
chr3 (34-114)||(37788461-37788541)
chr3 (44-115)||(7975417-7975488)
chr3 (8-107)||(8075097-8075196)
chr3 (34-117)||(32651434-32651516)
chr3 (27-115)||(34062537-34062627)
chr3 (27-114)||(40063619-40063706)
chr3 (8-79)||(44743825-44743896)
chr3 (27-114)||(53863857-53863943)
chr3 (8-114)||(8170672-8170778)
chr3 (52-114)||(31788984-31789046)
chr3 (34-120)||(37051290-37051376)
chr3 (34-111)||(30510195-30510272)
chr3 (34-79)||(39253732-39253777)
chr3 (43-112)||(42799753-42799821)
chr3 (34-78)||(3427549-3427593)
chr3 (6-106)||(12761520-12761620)
chr3 (40-96)||(17554789-17554845)
chr3 (51-115)||(18319181-18319245)
chr3 (35-115)||(19154630-19154710)
chr3 (27-71)||(20501739-20501783)
chr3 (43-115)||(45308907-45308979)
chr3 (8-68)||(54990748-54990808)
chr3 (43-114)||(2597225-2597296)
chr3 (43-114)||(3054994-3055065)
chr3 (8-91)||(28531028-28531111)
chr3 (4-115)||(32638944-32639055)
chr3 (8-79)||(52769953-52770024)
chr3 (44-114)||(17108904-17108974)
chr3 (32-114)||(26481927-26482009)
chr3 (29-107)||(33270463-33270541)
chr3 (6-111)||(15034348-15034452)
chr3 (43-72)||(24353384-24353413)
chr3 (33-114)||(40286852-40286933)
chr3 (30-79)||(51766930-51766979)
chr3 (27-79)||(8501562-8501614)
chr3 (43-115)||(9557319-9557391)
chr3 (55-111)||(28928896-28928952)
chr3 (55-111)||(31295458-31295514)
chr3 (8-120)||(31510688-31510800)
chr3 (35-71)||(33899657-33899693)
chr3 (27-71)||(36010785-36010829)
chr3 (27-115)||(40268488-40268575)
chr3 (43-71)||(49452916-49452944)
[»] chr1 (76 HSPs)
chr1 (8-115)||(51814493-51814600)
chr1 (27-112)||(33700762-33700847)
chr1 (12-117)||(40257396-40257501)
chr1 (30-114)||(19528319-19528403)
chr1 (47-115)||(41508830-41508898)
chr1 (27-114)||(9165184-9165271)
chr1 (27-115)||(8177171-8177259)
chr1 (27-114)||(2799862-2799949)
chr1 (8-114)||(16893394-16893500)
chr1 (8-114)||(52116751-52116857)
chr1 (27-120)||(8904408-8904501)
chr1 (34-115)||(36371469-36371550)
chr1 (34-118)||(4566544-4566628)
chr1 (35-111)||(15786317-15786393)
chr1 (8-115)||(6122793-6122900)
chr1 (27-114)||(37400274-37400361)
chr1 (8-114)||(18037583-18037689)
chr1 (12-114)||(31605822-31605924)
chr1 (33-114)||(2219972-2220053)
chr1 (8-97)||(12587287-12587375)
chr1 (12-116)||(21547454-21547558)
chr1 (16-115)||(6650594-6650693)
chr1 (8-111)||(24730387-24730490)
chr1 (8-114)||(50901581-50901687)
chr1 (28-114)||(15581132-15581217)
chr1 (36-114)||(16169976-16170054)
chr1 (8-114)||(31794234-31794340)
chr1 (37-114)||(9117119-9117196)
chr1 (34-115)||(11063555-11063636)
chr1 (13-114)||(19940847-19940948)
chr1 (8-113)||(44126396-44126501)
chr1 (8-115)||(45235348-45235456)
chr1 (34-114)||(51703779-51703859)
chr1 (8-71)||(1094568-1094631)
chr1 (36-107)||(17410238-17410309)
chr1 (37-114)||(21694446-21694520)
chr1 (12-115)||(34228873-34228975)
chr1 (27-86)||(40810495-40810554)
chr1 (8-103)||(52336744-52336839)
chr1 (29-95)||(9643800-9643866)
chr1 (8-114)||(12662282-12662388)
chr1 (16-110)||(17745234-17745328)
chr1 (27-73)||(30203216-30203262)
chr1 (8-114)||(44961765-44961871)
chr1 (34-115)||(1247112-1247193)
chr1 (34-71)||(3265967-3266004)
chr1 (33-110)||(9224779-9224856)
chr1 (31-72)||(51281393-51281434)
chr1 (34-94)||(10526843-10526903)
chr1 (11-95)||(31383771-31383855)
chr1 (27-71)||(43446006-43446050)
chr1 (27-67)||(45266881-45266921)
chr1 (8-71)||(15065008-15065071)
chr1 (8-71)||(23566309-23566372)
chr1 (8-115)||(25297771-25297878)
chr1 (8-71)||(27476741-27476804)
chr1 (6-109)||(36428717-36428820)
chr1 (44-115)||(37046984-37047054)
chr1 (8-107)||(42983344-42983443)
chr1 (44-119)||(47753709-47753784)
chr1 (8-110)||(24047072-24047174)
chr1 (37-71)||(38947471-38947505)
chr1 (52-94)||(44046162-44046204)
chr1 (8-69)||(3799951-3800012)
chr1 (44-117)||(4824968-4825041)
chr1 (12-97)||(6127961-6128045)
chr1 (37-114)||(19020288-19020365)
chr1 (47-119)||(9570639-9570710)
chr1 (8-71)||(17297027-17297091)
chr1 (43-71)||(21392880-21392908)
chr1 (27-63)||(29753700-29753736)
chr1 (43-115)||(29817674-29817746)
chr1 (8-116)||(34460879-34460987)
chr1 (12-116)||(39714753-39714856)
chr1 (16-108)||(48400178-48400269)
chr1 (8-71)||(52029906-52029970)
[»] chr8 (58 HSPs)
chr8 (8-114)||(968362-968468)
chr8 (8-114)||(23361619-23361725)
chr8 (8-112)||(2203494-2203598)
chr8 (8-115)||(28783059-28783166)
chr8 (8-112)||(3624582-3624685)
chr8 (8-113)||(29858019-29858124)
chr8 (36-116)||(16852338-16852418)
chr8 (36-116)||(19703485-19703565)
chr8 (38-114)||(33727873-33727949)
chr8 (8-115)||(8484998-8485105)
chr8 (27-114)||(18540298-18540385)
chr8 (27-114)||(33017214-33017301)
chr8 (8-94)||(6536540-6536626)
chr8 (12-114)||(40872876-40872978)
chr8 (8-97)||(30774706-30774795)
chr8 (30-111)||(36205198-36205279)
chr8 (43-115)||(4830486-4830558)
chr8 (27-115)||(12988427-12988515)
chr8 (8-116)||(35641871-35641979)
chr8 (8-91)||(3305158-3305241)
chr8 (15-118)||(18897162-18897265)
chr8 (43-114)||(26688865-26688936)
chr8 (27-114)||(35287716-35287803)
chr8 (8-114)||(11819776-11819882)
chr8 (12-116)||(3058023-3058127)
chr8 (38-114)||(6436555-6436631)
chr8 (15-115)||(22268911-22269010)
chr8 (38-114)||(27750730-27750806)
chr8 (34-114)||(30483880-30483960)
chr8 (27-114)||(6530807-6530893)
chr8 (44-115)||(44780120-44780191)
chr8 (36-114)||(8059632-8059710)
chr8 (34-112)||(8794341-8794419)
chr8 (29-103)||(35690055-35690129)
chr8 (27-116)||(13129666-13129755)
chr8 (8-111)||(11492043-11492146)
chr8 (8-115)||(28566104-28566210)
chr8 (8-115)||(28573727-28573833)
chr8 (35-114)||(29431011-29431090)
chr8 (35-117)||(3826774-3826856)
chr8 (37-115)||(11928730-11928808)
chr8 (47-116)||(5264542-5264611)
chr8 (36-97)||(10287492-10287553)
chr8 (61-114)||(14254727-14254780)
chr8 (15-72)||(28787473-28787530)
chr8 (34-98)||(7140725-7140789)
chr8 (60-112)||(7286209-7286261)
chr8 (32-76)||(22193358-22193402)
chr8 (62-117)||(5801044-5801099)
chr8 (35-114)||(6569768-6569847)
chr8 (12-115)||(11793495-11793598)
chr8 (12-71)||(16843768-16843827)
chr8 (8-114)||(20994427-20994534)
chr8 (43-114)||(23874387-23874458)
chr8 (65-116)||(27121008-27121059)
chr8 (8-110)||(4435979-4436081)
chr8 (34-71)||(31408118-31408155)
chr8 (33-90)||(34628666-34628723)
[»] chr2 (56 HSPs)
chr2 (8-114)||(42327365-42327471)
chr2 (8-115)||(37480074-37480181)
chr2 (36-117)||(29503268-29503349)
chr2 (8-117)||(42602551-42602660)
chr2 (8-112)||(12086099-12086203)
chr2 (22-113)||(16918562-16918653)
chr2 (8-115)||(11251086-11251193)
chr2 (8-115)||(39714991-39715098)
chr2 (8-114)||(23052493-23052599)
chr2 (12-114)||(41908612-41908714)
chr2 (6-115)||(21213768-21213877)
chr2 (27-115)||(7799024-7799112)
chr2 (27-114)||(42922414-42922502)
chr2 (29-116)||(4060205-4060292)
chr2 (34-116)||(19322766-19322848)
chr2 (27-116)||(34041577-34041666)
chr2 (27-115)||(14500276-14500364)
chr2 (8-84)||(25637181-25637257)
chr2 (8-115)||(3001378-3001485)
chr2 (31-90)||(4262295-4262354)
chr2 (8-115)||(29197346-29197453)
chr2 (8-71)||(37971938-37972001)
chr2 (27-114)||(40416379-40416466)
chr2 (8-114)||(19016031-19016137)
chr2 (8-114)||(19244109-19244215)
chr2 (38-115)||(21195676-21195753)
chr2 (8-116)||(30808617-30808725)
chr2 (15-110)||(12801293-12801388)
chr2 (43-94)||(17737629-17737680)
chr2 (35-114)||(26545840-26545919)
chr2 (8-114)||(1435064-1435169)
chr2 (27-116)||(1729814-1729903)
chr2 (34-103)||(6658393-6658462)
chr2 (33-114)||(18259730-18259811)
chr2 (8-97)||(31573611-31573700)
chr2 (6-75)||(33569826-33569895)
chr2 (34-114)||(5147675-5147755)
chr2 (34-114)||(11062360-11062440)
chr2 (48-111)||(30359657-30359720)
chr2 (27-114)||(32106566-32106653)
chr2 (28-71)||(33839250-33839293)
chr2 (52-114)||(16381668-16381730)
chr2 (36-114)||(26482093-26482170)
chr2 (43-113)||(37755976-37756046)
chr2 (27-116)||(3697389-3697477)
chr2 (37-114)||(4438978-4439055)
chr2 (34-83)||(6859308-6859357)
chr2 (34-71)||(13803538-13803575)
chr2 (27-116)||(22363178-22363267)
chr2 (33-94)||(23230600-23230661)
chr2 (60-112)||(6760889-6760941)
chr2 (8-64)||(12632768-12632824)
chr2 (35-115)||(25931005-25931085)
chr2 (43-71)||(26276398-26276426)
chr2 (38-114)||(42860348-42860424)
chr2 (27-71)||(45026786-45026830)
[»] chr7 (77 HSPs)
chr7 (8-115)||(30579334-30579441)
chr7 (34-118)||(17041008-17041092)
chr7 (27-114)||(26459399-26459486)
chr7 (8-115)||(2446307-2446414)
chr7 (12-114)||(19553454-19553555)
chr7 (10-114)||(22760863-22760967)
chr7 (12-115)||(38374573-38374676)
chr7 (8-114)||(5579204-5579310)
chr7 (8-122)||(11720930-11721044)
chr7 (8-114)||(15137553-15137659)
chr7 (8-114)||(25590611-25590717)
chr7 (8-114)||(43590907-43591013)
chr7 (8-114)||(48771938-48772044)
chr7 (29-114)||(33869436-33869521)
chr7 (8-115)||(41487361-41487465)
chr7 (34-115)||(43215183-43215264)
chr7 (34-114)||(18363696-18363776)
chr7 (34-114)||(39631844-39631924)
chr7 (11-115)||(45709681-45709785)
chr7 (12-114)||(5273564-5273666)
chr7 (8-69)||(21558173-21558234)
chr7 (34-115)||(23552117-23552198)
chr7 (43-120)||(31835186-31835263)
chr7 (8-71)||(279924-279987)
chr7 (12-71)||(2882993-2883052)
chr7 (43-114)||(7801180-7801251)
chr7 (34-117)||(13106778-13106860)
chr7 (27-94)||(29785290-29785357)
chr7 (35-114)||(30442488-30442567)
chr7 (27-114)||(48039636-48039723)
chr7 (33-111)||(20952144-20952222)
chr7 (46-112)||(21854550-21854616)
chr7 (48-114)||(25021345-25021411)
chr7 (29-94)||(7721389-7721454)
chr7 (29-94)||(33222390-33222455)
chr7 (8-109)||(41519235-41519335)
chr7 (45-114)||(42836008-42836077)
chr7 (46-114)||(37233580-37233648)
chr7 (33-116)||(14058251-14058334)
chr7 (33-116)||(14368279-14368362)
chr7 (36-111)||(15905672-15905746)
chr7 (8-71)||(18056745-18056808)
chr7 (35-78)||(30217915-30217958)
chr7 (52-111)||(45976937-45976996)
chr7 (48-114)||(3280495-3280561)
chr7 (31-93)||(5668564-5668626)
chr7 (8-78)||(9183161-9183231)
chr7 (8-114)||(20335801-20335907)
chr7 (46-116)||(23595727-23595797)
chr7 (6-112)||(29385711-29385817)
chr7 (12-114)||(48125149-48125250)
chr7 (34-94)||(2962479-2962539)
chr7 (28-112)||(7744102-7744186)
chr7 (34-94)||(9608625-9608685)
chr7 (34-94)||(9836197-9836257)
chr7 (27-115)||(25655217-25655305)
chr7 (34-114)||(29196905-29196985)
chr7 (12-115)||(33460396-33460500)
chr7 (35-114)||(23301599-23301678)
chr7 (43-114)||(24513797-24513868)
chr7 (36-71)||(29916806-29916841)
chr7 (8-115)||(33181180-33181287)
chr7 (36-107)||(37085547-37085618)
chr7 (8-71)||(41519080-41519143)
chr7 (8-71)||(42712001-42712064)
chr7 (36-114)||(4161288-4161366)
chr7 (8-58)||(4572267-4572317)
chr7 (8-114)||(22932682-22932787)
chr7 (36-114)||(25956291-25956368)
chr7 (48-86)||(37094777-37094815)
chr7 (34-67)||(11700212-11700245)
chr7 (37-114)||(39499718-39499795)
chr7 (34-114)||(17113795-17113875)
chr7 (37-69)||(30301925-30301957)
chr7 (29-73)||(47824591-47824635)
chr7 (31-71)||(48959241-48959281)
chr7 (15-71)||(49050468-49050524)
[»] chr4 (72 HSPs)
chr4 (8-115)||(51250492-51250599)
chr4 (27-119)||(37109340-37109432)
chr4 (8-115)||(7949424-7949531)
chr4 (8-114)||(19238547-19238653)
chr4 (8-114)||(28635696-28635802)
chr4 (8-114)||(55427170-55427276)
chr4 (34-115)||(12798683-12798764)
chr4 (43-114)||(9241030-9241101)
chr4 (8-114)||(37274429-37274536)
chr4 (36-115)||(37720212-37720291)
chr4 (27-94)||(38869788-38869855)
chr4 (8-114)||(39509070-39509176)
chr4 (37-111)||(41346962-41347036)
chr4 (33-107)||(49576889-49576963)
chr4 (47-116)||(32003087-32003156)
chr4 (33-114)||(51948480-51948561)
chr4 (38-114)||(31826609-31826685)
chr4 (15-94)||(30938196-30938275)
chr4 (27-114)||(33619206-33619293)
chr4 (12-71)||(46295140-46295199)
chr4 (28-114)||(1730479-1730565)
chr4 (8-114)||(8030174-8030280)
chr4 (34-116)||(31802042-31802124)
chr4 (36-114)||(47044717-47044795)
chr4 (34-111)||(7292794-7292871)
chr4 (27-116)||(19680777-19680866)
chr4 (37-114)||(31759657-31759734)
chr4 (34-118)||(21660140-21660224)
chr4 (34-118)||(21668904-21668988)
chr4 (34-90)||(23377980-23378036)
chr4 (8-96)||(43728413-43728500)
chr4 (34-114)||(46545711-46545791)
chr4 (27-117)||(2185021-2185112)
chr4 (27-114)||(4249177-4249264)
chr4 (27-94)||(44194973-44195040)
chr4 (27-114)||(44865334-44865421)
chr4 (8-71)||(51622528-51622591)
chr4 (27-114)||(2622384-2622475)
chr4 (12-114)||(8325353-8325455)
chr4 (12-65)||(2732043-2732096)
chr4 (43-96)||(21775927-21775980)
chr4 (34-115)||(29195094-29195174)
chr4 (15-106)||(5118985-5119077)
chr4 (34-94)||(7539610-7539670)
chr4 (12-116)||(21344815-21344918)
chr4 (34-110)||(24234649-24234725)
chr4 (8-114)||(37443702-37443805)
chr4 (27-87)||(51969044-51969104)
chr4 (27-94)||(16581713-16581780)
chr4 (43-114)||(17618281-17618352)
chr4 (27-114)||(20770911-20770998)
chr4 (8-67)||(38838844-38838903)
chr4 (12-114)||(55256173-55256275)
chr4 (27-114)||(56409951-56410037)
chr4 (34-116)||(4923548-4923630)
chr4 (8-94)||(13015447-13015533)
chr4 (36-114)||(20608922-20609000)
chr4 (65-115)||(27965537-27965587)
chr4 (29-71)||(32992655-32992697)
chr4 (36-110)||(37980146-37980219)
chr4 (44-114)||(38206132-38206201)
chr4 (44-114)||(42281240-42281309)
chr4 (34-92)||(53496899-53496957)
chr4 (27-64)||(4483290-4483327)
chr4 (17-114)||(8714680-8714776)
chr4 (28-65)||(11842910-11842947)
chr4 (43-116)||(24827823-24827896)
chr4 (27-76)||(46329202-46329251)
chr4 (8-68)||(19531972-19532032)
chr4 (34-106)||(34075516-34075588)
chr4 (8-112)||(40283956-40284060)
chr4 (30-114)||(40813310-40813394)
[»] scaffold0258 (1 HSPs)
scaffold0258 (8-114)||(15293-15399)
[»] chr6 (42 HSPs)
chr6 (8-115)||(33549103-33549210)
chr6 (8-114)||(30127400-30127506)
chr6 (34-115)||(12188299-12188380)
chr6 (8-116)||(31622961-31623069)
chr6 (38-116)||(10338174-10338252)
chr6 (36-114)||(14557962-14558040)
chr6 (8-116)||(12234477-12234585)
chr6 (34-114)||(13227154-13227234)
chr6 (8-95)||(6385881-6385968)
chr6 (33-116)||(20744504-20744587)
chr6 (8-114)||(21418470-21418576)
chr6 (12-114)||(24333999-24334101)
chr6 (8-114)||(24641160-24641266)
chr6 (8-94)||(28363957-28364043)
chr6 (8-113)||(6758392-6758497)
chr6 (34-115)||(24617078-24617158)
chr6 (35-112)||(32613137-32613214)
chr6 (34-110)||(6776603-6776679)
chr6 (34-114)||(15951298-15951378)
chr6 (8-71)||(28841457-28841520)
chr6 (27-109)||(6691540-6691621)
chr6 (8-65)||(8597717-8597774)
chr6 (38-114)||(3779339-3779415)
chr6 (47-91)||(8639129-8639173)
chr6 (55-111)||(34293833-34293889)
chr6 (36-108)||(34444809-34444881)
chr6 (27-70)||(10650028-10650071)
chr6 (43-94)||(24555739-24555790)
chr6 (8-114)||(1056655-1056761)
chr6 (35-97)||(12216761-12216823)
chr6 (38-116)||(14199947-14200025)
chr6 (36-94)||(14446215-14446273)
chr6 (48-114)||(34830303-34830369)
chr6 (33-114)||(2616476-2616557)
chr6 (33-114)||(12633009-12633090)
chr6 (29-114)||(14278102-14278186)
chr6 (43-76)||(23910116-23910149)
chr6 (30-107)||(24507528-24507605)
chr6 (36-80)||(14695036-14695080)
chr6 (28-88)||(17149575-17149634)
chr6 (8-76)||(20213079-20213147)
chr6 (8-76)||(22107102-22107170)
[»] chr5 (43 HSPs)
chr5 (8-118)||(30109279-30109388)
chr5 (8-115)||(29692356-29692463)
chr5 (8-114)||(16773807-16773913)
chr5 (8-114)||(29075781-29075887)
chr5 (34-94)||(43442216-43442276)
chr5 (27-114)||(16457810-16457897)
chr5 (12-114)||(21589288-21589390)
chr5 (11-117)||(30883171-30883277)
chr5 (29-114)||(25627057-25627142)
chr5 (27-115)||(14285160-14285248)
chr5 (27-115)||(34984805-34984893)
chr5 (44-118)||(87429-87503)
chr5 (8-114)||(8278245-8278351)
chr5 (12-114)||(14495779-14495881)
chr5 (8-114)||(17028234-17028340)
chr5 (34-115)||(26078047-26078128)
chr5 (8-79)||(84859-84930)
chr5 (27-114)||(7918458-7918545)
chr5 (27-112)||(18595990-18596075)
chr5 (38-115)||(22737081-22737158)
chr5 (34-114)||(21549133-21549213)
chr5 (8-111)||(12877696-12877799)
chr5 (8-115)||(22020832-22020939)
chr5 (33-110)||(12883844-12883921)
chr5 (43-116)||(16436616-16436688)
chr5 (29-94)||(37258357-37258422)
chr5 (36-116)||(16172982-16173061)
chr5 (43-114)||(892479-892550)
chr5 (44-91)||(4793094-4793141)
chr5 (8-71)||(29173533-29173596)
chr5 (16-114)||(6844729-6844827)
chr5 (29-111)||(21086717-21086799)
chr5 (17-71)||(35360065-35360119)
chr5 (29-114)||(19949607-19949691)
chr5 (34-71)||(25979213-25979250)
chr5 (29-78)||(27841010-27841059)
chr5 (34-115)||(36958118-36958199)
chr5 (47-107)||(1410668-1410728)
chr5 (27-71)||(3315258-3315302)
chr5 (27-111)||(14804659-14804743)
chr5 (35-94)||(17155844-17155901)
chr5 (27-71)||(31074275-31074319)
chr5 (8-116)||(43241652-43241760)
[»] scaffold0194 (1 HSPs)
scaffold0194 (32-110)||(13040-13118)
[»] scaffold0299 (1 HSPs)
scaffold0299 (29-108)||(11534-11613)
[»] scaffold0291 (1 HSPs)
scaffold0291 (36-114)||(2468-2546)
[»] scaffold0118 (1 HSPs)
scaffold0118 (8-114)||(41603-41709)
[»] scaffold0032 (1 HSPs)
scaffold0032 (8-114)||(112282-112388)
[»] scaffold0002 (2 HSPs)
scaffold0002 (27-111)||(94960-95044)
scaffold0002 (8-114)||(459883-459989)
[»] scaffold0517 (1 HSPs)
scaffold0517 (27-114)||(7715-7802)
[»] scaffold0013 (1 HSPs)
scaffold0013 (43-116)||(91123-91196)
[»] scaffold0172 (2 HSPs)
scaffold0172 (8-115)||(15747-15854)
scaffold0172 (52-115)||(32783-32846)
[»] scaffold1367 (1 HSPs)
scaffold1367 (34-108)||(836-910)
[»] scaffold0221 (1 HSPs)
scaffold0221 (36-114)||(2907-2985)
[»] scaffold0004 (1 HSPs)
scaffold0004 (36-90)||(81562-81616)
[»] scaffold0180 (1 HSPs)
scaffold0180 (29-103)||(19953-20027)
[»] scaffold0238 (1 HSPs)
scaffold0238 (27-67)||(2700-2740)
[»] scaffold0021 (1 HSPs)
scaffold0021 (51-107)||(157000-157056)
[»] scaffold0070 (1 HSPs)
scaffold0070 (35-114)||(42517-42596)
[»] scaffold0337 (1 HSPs)
scaffold0337 (30-107)||(1760-1837)
[»] scaffold0126 (1 HSPs)
scaffold0126 (29-94)||(25338-25403)
[»] scaffold0178 (1 HSPs)
scaffold0178 (35-119)||(6631-6715)
[»] scaffold0122 (1 HSPs)
scaffold0122 (43-107)||(6924-6988)
[»] scaffold0008 (1 HSPs)
scaffold0008 (8-92)||(49328-49412)


Alignment Details
Target: chr3 (Bit Score: 184; Significance: 2e-99; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 135 - 362
Target Start/End: Complemental strand, 30232243 - 30232016
Alignment:
Q  135 caaagtacatttggaaccacatttgagaaagtataaccacaattggaaccacatagcaacgaatacatgaaaagataatcatcttatgccaattatatcc 234  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  30232243 caaagtacatttggaaccacattggagaaagtataaccacaattggaaccacttagcaacgaatacaggaaaagataatcatcttatgccaattatatcc 30232144  T
Q  235 aagcatgtatataaggnnnnnnnngaagaagccaaactattccatcgaaactggtacgggaataatcgtacctgaggccttttgagataagtacactcaa 334  Q
    ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  30232143 aagcatgtatataaggttttttatgaagaagccaaactattccatcgaaactggtacgggaataatcttacctgagaccttttgagataagtacactcaa 30232044  T
Q  335 actaaggtcccaatccaacaccactcgg 362  Q
    ||||||||||||||||||||||||||||    
T  30232043 actaaggtcccaatccaacaccactcgg 30232016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 30232436 - 30232312
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||| | |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  30232436 aaattagcccaaccaaattggcaccggagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccaccagggcaacccaa 30232337  T
Q  108 gtgggtttatatgctacatgatctt 132  Q
    |||||||||||||||||||||||||    
T  30232336 gtgggtttatatgctacatgatctt 30232312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 14186748 - 14186648
Alignment:
Q  13 agcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    ||||||||||||  | ||||||||||||| |||||||||||||||||||||||||||| ||||| || |||  ||||||||| ||| |||||||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacac-tccaggtcccaagacaataccactaggccaacccaagtggg 14186650  T
Q  113 tt 114  Q
    ||    
T  14186649 tt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 10499079 - 10499186
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | || |||||||||| |||||||||||||  |||| ||||| ||| ||||||| ||| |||||||||||||| ||||||||    
T  10499079 aaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaa 10499178  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  10499179 gtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 51903848 - 51903954
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||  |||  | ||||||||||||| ||||||||||||  ||||||||||||||| ||||||| ||| ||||||||| |||| |||||||     
T  51903848 aaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccag 51903947  T
Q  108 gtgggtt 114  Q
    |||||||    
T  51903948 gtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 30311385 - 30311304
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| ||| || ||||||| ||| ||||||| |||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttta 30311304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 5499396 - 5499484
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||||| |||||| ||||||| ||||||||||||||  |||||| |||  ||||||||||||| ||||||||||||||||    
T  5499396 ggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 53413032 - 53412948
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| |||| | |||| |||||||||| ||  ||||||||||||    
T  53413032 ggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 4844481 - 4844580
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||  |||  ||||||||||||||| || |||||||||| ||||||||||||||| ||||||| |||  ||||||||||||  ||||||||    
T  4844481 aaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 4870177 - 4870276
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||  |||  ||||||||||||||| || |||||||||| ||||||||||||||| ||||||| |||  ||||||||||||  ||||||||    
T  4870177 aaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 8051315 - 8051212
Alignment:
Q  13 agcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    |||||| |||||  |||||||||| |||| |||| |||||||| |||||| |||| ||| |||| || ||| |||||||||||||| |||||||||||||    
T  8051315 agcccaactaaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtggg 8051216  T
Q  113 ttta 116  Q
    ||||    
T  8051215 ttta 8051212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 31520575 - 31520682
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||  |||  | ||| |||||||||  ||||| |||||| ||||||||||||||| ||||||| ||| ||||| |||||||| ||||||||    
T  31520575 aaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaa 31520674  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  31520675 gtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 36720482 - 36720379
Alignment:
Q  13 agcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    ||||||||||||  | |||  |||||||| |||||||| |||| ||||||||||||||| ||| ||| ||| |||||||||||||  |||||||||||||    
T  36720482 agcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtggg 36720383  T
Q  113 ttta 116  Q
    ||||    
T  36720382 ttta 36720379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 14339716 - 14339610
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||| ||  |||||  | |||||| ||||||||||| ||||||||||||||||| ||| ||| ||| |||||||||||||| ||| ||||    
T  14339716 aaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaa 14339617  T
Q  108 gtgggtt 114  Q
     ||||||    
T  14339616 ctgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 4222226 - 4222141
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||||||| |||||| |||| ||||||||||||||||| ||||||| ||| |||||||||| | | |||||||||||||||    
T  4222226 caccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 46518708 - 46518627
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||||  ||||||| |||||||||||||||||||| ||||||| ||| |||||||||| | | ||||||||||||||||    
T  46518708 gagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 27093350 - 27093438
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| ||||||||  |||||||||||||||||||||||||||| |||  |  ||| |||||||||| ||| ||||||||||||||||    
T  27093350 ggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 44069860 - 44069776
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccacca 96  Q
    |||||||||||||  ||||||||| |||||  |||||||||||||||||||||||||||| | ||||| ||| |||| |||||||    
T  44069860 tagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactccaagatctcaagccaacaccacca 44069776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 2667964 - 2667869
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||  | |||  |||| ||| ||||||||||||| ||||| ||||||||| ||||||| ||| |||||||||||||| ||||||||    
T  2667964 tagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 16354881 - 16354968
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||  ||| |  ||| |||||||||| ||| |||||||||||||||    
T  16354881 ggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 47236941 - 47237031
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagg 98  Q
    |||| |||||||| |||  |||||||| |||||| |||| ||||||||||| |||||||||||| || | || ||||||||||||||||||    
T  47236941 aaataagcccacccaaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccagg 47237031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 47454594 - 47454692
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggt 113  Q
    ||||||||||  ||||  || |||||| ||||||||||||| ||||||||||||||| | ||||| ||| |||||||||| ||  ||||||||||||||    
T  47454594 cccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 15048050 - 15048138
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| |||| ||| ||||||||||||||||||||||||||| | ||||||| ||| || ||||||  | | ||||||||||||||||    
T  15048050 ggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 21960631 - 21960551
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| ||| ||||||||| |||||||||||||||  ||| || ||| ||||||||||||| ||||||||| ||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 27923043 - 27923119
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||||||||||  ||||||||||||||||||||  || ||| |||||||||||||| ||||| |||||||||    
T  27923043 gaatcgaacctgagactatgaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 10445129 - 10445216
Alignment:
Q  28 gcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaa-taccaccagggcaacccaagtgggtt 114  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||| |||| || ||| |||| | |||| ||| |||||||||||||||    
T  10445129 gcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 28703393 - 28703480
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||||||||||||| |||||||||||| ||||||| ||| | |||| |||  |  |||||||||||||||    
T  28703393 ggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 29563980 - 29563917
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccag 97  Q
    |||||||| ||||||||||| | |||||| |||||||||||||||| ||| |||||||||||||    
T  29563980 gagagaatcgaacctgagacttcgaggagaagcacacttccagatctcaagccaataccaccag 29563917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 47810718 - 47810820
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttcc-agatcacaaaccaataccaccagggcaacccaagtg 110  Q
    ||||||||| |||  |||||||||||||||  |||| ||||||||| ||||||||||||| || ||| || || |||||||||||||  |||||||||||    
T  47810718 tagcccacccaaattggcaccggagagaatcaaacccgagaccttgcggaggagcacactcccaagacca-aagccaataccaccagaccaacccaagtg 47810816  T
Q  111 ggtt 114  Q
    ||||    
T  47810817 ggtt 47810820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 11612405 - 11612307
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccca 106  Q
    ||||||| | |||||||  |||||||| ||| || |||||||||||||| |||||||||||||| |||| || |||   |||||||||||| |||||||    
T  11612405 aaattagtcgacctaaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 16991648 - 16991542
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||| ||||  |||| ||||||||||  || |||||||||  | || ||| ||||| ||||||| ||| |||||||||||||| ||||||||    
T  16991648 aaattagcccacataaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggccaacccaa 16991549  T
Q  108 gtgggtt 114  Q
     ||||||    
T  16991548 atgggtt 16991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 34844451 - 34844370
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||| |||| ||||||||||||||||| ||||||||||| | || || ||| |||| | ||||||||||||||||||||||||    
T  34844451 ggagggaatcgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacaacaccagggcaacccaagtgggttt 34844370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 13808881 - 13808958
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||| |||  |||||  |||||  ||||||||||||    
T  13808881 gagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 17035064 - 17034991
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||| ||||||||||||||||||| |||||| ||  |||||| |||  |||||||||||| |||||||||||||    
T  17035064 gagaatcgaacctgagaccttgaggatgagcactct--cagatcccaagtcaataccaccagagcaacccaagtgg 17034991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 19716303 - 19716199
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||||| |||||| ||||| ||||||||||||||||||||||| |  | || ||| |||| ||||||| | ||||||||    
T  19716303 aaattagcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaacaccaccatgtcaacccaa 19716204  T
Q  108 gtggg 112  Q
     ||||    
T  19716203 atggg 19716199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 37788461 - 37788541
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| ||||||||||||||||||||||||||||| | || |  |||  |||||||||  || |||||||||||||||    
T  37788461 gagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 7975488 - 7975417
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||| |||||||||||||||||||||| ||||||| ||| || ||||||| ||| ||||| || |||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggttt 7975417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 8075097 - 8075196
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||  ||| |||| |||||||| |||||||||||||||||||| |||  || ||| || ||||||| ||||||||||||    
T  8075097 aaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 32651434 - 32651516
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttat 117  Q
    |||||||| ||| |||||| |||||||||||||||||| |||| || ||| |||||||||| ||| ||| | ||||||||||||    
T  32651434 gagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaa-ctaagtgggtttat 32651516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 34062537 - 34062627
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggag--gagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||| ||| ||  ||| |||||| |||  || ||||||||||||||||    
T  34062537 ggcaccagagagaattgaacctgagaccttgaggaggagagcacactcccaaatttcaagccaatatcactgggccaacccaagtgggttt 34062627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 40063706 - 40063619
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| ||||||||| |||| ||||||||| |||||||||| |||  |||||| ||| ||||||| || | | |||||||||||||||    
T  40063706 ggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 44743825 - 44743896
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatc 79  Q
    |||||| |||||| |||  ||||| ||||| ||| ||||||||||||| ||||||||||||||| |||||||    
T  44743825 aaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatc 44743896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 53863857 - 53863943
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||| |||||||||| ||||||||||| | || || ||| |||| | ||||||| |||||||||||||||    
T  53863857 ggcaccagagagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggacaacccaagtgggtt 53863943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 8170778 - 8170672
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||| |||  ||| ||||||||||||||||| ||||||||||| |||  |  ||| |||||||||| ||| ||||||||    
T  8170778 aaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaa 8170679  T
Q  108 gtgggtt 114  Q
     ||||||    
T  8170678 atgggtt 8170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 31788984 - 31789046
Alignment:
Q  52 accttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||||||||||||||| ||||||| ||| |||||| ||| ||| |||||||||||||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 37051290 - 37051376
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttatatg 120  Q
    |||||||| ||||||||||| || ||||||| |||||| ||||||| |||| ||||| ||| |   ||||||||||||||| |||||    
T  37051290 gagagaatcgaacctgagactttaaggaggaacacactcccagatcccaaatcaatatcactaaatcaacccaagtgggttcatatg 37051376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 30510195 - 30510272
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||| ||||||||||||| ||| ||||||| ||| | || || ||| ||| |||||||||| ||||||||||||    
T  30510195 gagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 39253777 - 39253732
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatc 79  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||    
T  39253777 gagagaatcgaacctgagaccttgaagaggagcacactcccagatc 39253732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 42799753 - 42799821
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    ||||||||||||||||| ||||||||||| | || || ||| |||| ||||||||| |||||||||||||    
T  42799753 gaacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 3427549 - 3427593
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagat 78  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||||    
T  3427549 gagagaatcgaatctgagaccttgaggaggagcacactcccagat 3427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 12761620 - 12761520
Alignment:
Q  6 caaaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccc 105  Q
    ||||| |||||||||||||  |||||||| || ||| |||||||||| ||  ||||||| |||||| |||| || |||  ||||||||||||  ||||||    
T  12761620 caaaactagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagaccaaccc 12761521  T
Q  106 a 106  Q
    |    
T  12761520 a 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 17554845 - 17554789
Alignment:
Q  40 atggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccacca 96  Q
    |||||||||||| ||||||||| ||||||||| |||| || ||| ||||||||||||    
T  17554845 atggaacctgagcccttgaggaagagcacactcccaggtcccaagccaataccacca 17554789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 18319181 - 18319245
Alignment:
Q  51 gaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||||||||||| |||| || |||||||||||||||| | ||||| |||| |||||    
T  18319181 gaccttgaagaggagcacactcccaggtcccaaaccaataccaccaagccaacctaagtaggttt 18319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 19154710 - 19154630
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||| |||||||||||||| ||||||||||||||  |||  | ||| ||||||| || ||| |||||||| |||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaacccaaatgggttt 19154630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 20501783 - 20501739
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||    
T  20501783 ggcactggagagaatcgaacctgagaccttaaggaggagcacact 20501739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 45308907 - 45308979
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||||||||| ||||||||||| |||  ||  || |||||||||||||||||  ||||||||||| ||||    
T  45308907 gaacctgagacctcgaggaggagcatactcacaagtcccaaaccaataccaccagaacaacccaagtgagttt 45308979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 54990808 - 54990748
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcac 68  Q
    |||||||||||||||||  | || ||  |||||| ||||||||||||||||||||||||||    
T  54990808 aaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcac 54990748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 2597225 - 2597296
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||||||  |||||||||||||| | | |||  || |||||||||||||  |||||||||||||||    
T  2597225 gaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 3055065 - 3054994
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||| ||||||||| ||||| || | || || ||| |||| ||||||||| |||||||||||||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 3054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 28531028 - 28531111
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaatac 91  Q
    ||||||||||||| |||  | |||| |||||||| || ||| |||||| ||||||||||| ||| ||||||| ||| |||||||    
T  28531028 aaattagcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 32639055 - 32638944
Alignment:
Q  4 aacaaaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaac 103  Q
    ||||||||||| |||| ||||  | ||| ||||| ||| ||||||||||||| || || || |||||| |||| |  ||| |||||||||||||  ||||    
T  32639055 aacaaaattaggccacttaaattgacactggagaaaatcgaacctgagacctcgaagatgaacacactcccagtttccaagccaataccaccagaacaac 32638956  T
Q  104 ccaagtgggttt 115  Q
    |||| |||||||    
T  32638955 ccaaatgggttt 32638944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 52769953 - 52770024
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatc 79  Q
    |||||||||||||||||  | |||   ||||||| |||||||||||||  |||||||||||||| |||||||    
T  52769953 aaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatc 52770024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 17108904 - 17108974
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||||||||||||||||||||| ||| ||| | |  |||||||||||    ||||||||||||||    
T  17108904 aacctgagaccttgaggaggagcacactcccacatctccagtcaataccaccaaactaacccaagtgggtt 17108974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 26482009 - 26481927
Alignment:
Q  32 cggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||| |||||| | || |||||||||||||||||  ||| || ||| ||| |||||||| |  ||||||||||||||    
T  26482009 cggagagaatcgaacctaaaactttgaggaggagcacactctcaggtcccaagccattaccaccaagctaacccaagtgggtt 26481927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 33270463 - 33270541
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||| ||||||||||||| ||| ||| |||||||  || || |||  ||||||||||||  ||||||||    
T  33270463 caccggagagaatgaaacctgagacctttaggtggaacacacttagaggtcccaagtcaataccaccagaccaacccaa 33270541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 15034452 - 15034348
Alignment:
Q  6 caaaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccc 105  Q
    |||||||||| |||| |||  |||||| | |||||| |||||||||||||||| ||||| ||| || | || || |||  ||| ||||||||| ||||||    
T  15034452 caaaattagctcaccgaaattggcaccagggagaattgaacctgagaccttga-gaggatcaccctccaaggtcccaaggcaacaccaccaggccaaccc 15034354  T
Q  106 aagtgg 111  Q
    ||||||    
T  15034353 aagtgg 15034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 72
Target Start/End: Original strand, 24353384 - 24353413
Alignment:
Q  43 gaacctgagaccttgaggaggagcacactt 72  Q
    ||||||||||||||||||||||||||||||    
T  24353384 gaacctgagaccttgaggaggagcacactt 24353413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 40286852 - 40286933
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||| ||| | ||| ||||||||||| |||||| | ||||| ||| | || ||||||||  |||||||||||||||    
T  40286852 ggagagaatgaaacataagatcttgaggaggaccacactccaagatctcaagcgaacaccaccagaccaacccaagtgggtt 40286933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 51766979 - 51766930
Alignment:
Q  30 accggagagaatggaacctgagaccttgaggaggagcacacttccagatc 79  Q
    |||||||||||| ||| |||| |||||||||| ||||||||| |||||||    
T  51766979 accggagagaatcgaatctgaaaccttgaggaagagcacactcccagatc 51766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 8501562 - 8501614
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatc 79  Q
    |||||||  |||||| |||||||| || ||||||||||||||||| |||||||    
T  8501562 ggcaccgaggagaattgaacctgaaactttgaggaggagcacactcccagatc 8501614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 9557391 - 9557319
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||||| || |||||||||||||||  |||||| ||| ||||||| | |||| || | |||||||||||    
T  9557391 gaacctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggttt 9557319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 28928896 - 28928952
Alignment:
Q  55 ttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||||||  |||||| ||| |||||||||| ||| ||| ||||||||    
T  28928896 ttgaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 31295514 - 31295458
Alignment:
Q  55 ttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||||||||||||| ||||| |||| |||||||| ||   ||||||||||||    
T  31295514 ttgaggaggagcacacttctagatcccaaatcaataccatcaaaccaacccaagtgg 31295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 31510688 - 31510800
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||   ||||||| |||||| |||| | ||||| |  ||||||||| ||| |||  || |||  ||||||||||||  ||||| ||    
T  31510688 aaattagcccacctaaattagcaccggggagaatcgaactttagaccgtatggaggagcatactcccaagtcccaagtcaataccaccagaccaacctaa 31510787  T
Q  108 gtgggtttatatg 120  Q
    ||||||| |||||    
T  31510788 gtgggttaatatg 31510800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 33899693 - 33899657
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  33899693 agagaatcgaacctgagacctagaggaggagcacact 33899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 36010829 - 36010785
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||| |||||||| |||| |||||| |||||||||||||||||    
T  36010829 ggcaccagagagaatcgaacttgagactttgaggaggagcacact 36010785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 40268575 - 40268488
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||| ||| |||||| |||||||||||||| || |||||| |||| | || || ||| |||| |||||||||  |||||||||||||||    
T  40268575 ggcatcggggagaatcgaacctgagaccttaag-aggagcccactccaaggtcccaagccaacaccaccaggcaaacccaagtgggttt 40268488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 49452944 - 49452916
Alignment:
Q  43 gaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||||||||||||||    
T  49452944 gaacctgagaccttgaggaggagcacact 49452916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 51814600 - 51814493
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||  |||||| |||  |||||||| |||| ||||||||    
T  51814600 aaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaa 51814501  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  51814500 gtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 33700762 - 33700847
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| ||||||  ||| |||||||||| ||| |||||||||||||    
T  33700762 ggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 40257501 - 40257396
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  | ||||||| ||||| |||| |||||||| ||||||||||||||| |||| || ||| |||||||||||||| ||||||||||||    
T  40257501 tagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgg 40257402  T
Q  112 gtttat 117  Q
    ||||||    
T  40257401 gtttat 40257396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 19528319 - 19528403
Alignment:
Q  30 accggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| |||||| |||||||||||||||||||||||||||||   ||||| ||| |||||||||||||| |||||||||||||||    
T  19528319 accggggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 41508898 - 41508830
Alignment:
Q  47 ctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 9165184 - 9165271
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| |||| || ||| |||||||||| ||| |||||||||||||||    
T  9165184 ggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 8177171 - 8177259
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| |||||||| |||||||| |||||||||||||||||||| ||||||| ||| |||||||||| ||| |||| ||| |||||||    
T  8177171 ggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 2799949 - 2799862
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||| || ||||||| ||| ||| | |||||||||    
T  2799949 ggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 16893500 - 16893394
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||  |||  | ||||||||| ||| ||||||||||||| ||||||||| ||||| ||| ||| ||| ||||||||| |||| ||||||||    
T  16893500 aaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaa 16893401  T
Q  108 gtgggtt 114  Q
    |||||||    
T  16893400 gtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 52116751 - 52116857
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||| ||  |||||  | |||||| ||||||||||| ||||||||||||||||| |||  || ||| |||||||||||||| ||||||||    
T  52116751 aaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 52116850  T
Q  108 gtgggtt 114  Q
     ||||||    
T  52116851 ctgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 8904501 - 8904408
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttatatg 120  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||  || ||| |||  |||||| || ||| |||||||||||||||||||||    
T  8904501 ggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtttatatg 8904408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 36371550 - 36371469
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||||| |||||||||||||||||||||| |||| |  ||| |||||||||| ||| ||||||||||||||||    
T  36371550 gagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 4566628 - 4566544
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttata 118  Q
    |||||||| |||||||||||| |||||||||||||||| |||| |  ||| |||||| ||| ||| |||||||||||||||||||    
T  4566628 gagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggtttata 4566544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 15786317 - 15786393
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||| || ||  ||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 6122900 - 6122793
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||  ||| |||| ||||||||||||||||||||||||||||| |||  || ||| || ||||||| ||||||||||||    
T  6122900 aaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 6122801  T
Q  108 gtgggttt 115  Q
     |||||||    
T  6122800 atgggttt 6122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 37400361 - 37400274
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||| ||||| |||| ||||||||| ||||||||||||||| ||| || ||| |||||||||||||  |||||||||| ||||    
T  37400361 ggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 18037583 - 18037689
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||| || ||  ||||||||||| |||  || |||||||||| || |||  ||||||||    
T  18037583 aaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaaaaggagcacactcccaagtcccaaaccaatatcatcagaccaacccaa 18037682  T
Q  108 gtgggtt 114  Q
    |||||||    
T  18037683 gtgggtt 18037689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 31605822 - 31605924
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  |||||||| |||||| |||| |||||||||||||||||||||||||| || || ||| |||| |||| |||| ||||  ||||||    
T  31605822 tagcccacccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacaccatcaggccaacataagtgg 31605921  T
Q  112 gtt 114  Q
    |||    
T  31605922 gtt 31605924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 2220053 - 2219972
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||| ||||||||||||| |||||| ||||||||| ||| |  ||| |||||||||||||  |||||||||||||||    
T  2220053 ggagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccagaacaacccaagtgggtt 2219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 12587375 - 12587287
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccag 97  Q
    |||||||||||||||||  | ||||||||||||| ||||||||||||| |||||||||||||||  |||||| |||  ||||| ||||||    
T  12587375 aaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaatatcaccag 12587287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 21547454 - 21547558
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||  |||| | |||||||| |||||||| |||| |||||||||||| || |||  || ||| |||||||||| ||| |||||||||| |    
T  21547454 tagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagtcg 21547553  T
Q  112 gttta 116  Q
    |||||    
T  21547554 gttta 21547558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 6650693 - 6650594
Alignment:
Q  16 ccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||||  | |||| |||||||| ||||||||||| ||||||||||||| ||| || |||| ||| |||||||||| ||| ||||| || |||||||    
T  6650693 ccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggttt 6650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 24730490 - 24730387
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||||  ||| ||  |||||| |||||||| |||||||||||| ||||||| |||  ||||||||| ||| ||||||||    
T  24730490 aaattagcccacccaaattggcaccgaggaggatcaaacctgggaccttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaa 24730391  T
Q  108 gtgg 111  Q
    ||||    
T  24730390 gtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 50901687 - 50901581
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaa-taccaccagggcaaccca 106  Q
    |||||||||||||||||  ||||| | ||||||| |||  |||||||| ||||||||||||||| |||| || ||| |||| |||||| ||| |||||||    
T  50901687 aaattagcccacctaaattggcactg-agagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaaccca 50901589  T
Q  107 agtgggtt 114  Q
    ||||||||    
T  50901588 agtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 15581132 - 15581217
Alignment:
Q  28 gcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| |||||| |||||||||||||| || ||||||||||| | || || ||| |||| ||||||||| |||||||||||||||    
T  15581132 gcaccggggagaattgaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 16169976 - 16170054
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| ||||||||||||| |||||| |||| || |||  |||||||||||||  ||||||||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 31794234 - 31794340
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||| ||| |||| ||||   |||||||||||||||||||||| |||  || ||| |||||||||| ||| ||||||||    
T  31794234 aaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaa 31794333  T
Q  108 gtgggtt 114  Q
    |||||||    
T  31794334 gtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 9117196 - 9117119
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| |||||||||||||  |||||||||||||||||||||| ||| || |||||| | || |||||||| ||||||    
T  9117196 agaatcgaacctgagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaacccaaatgggtt 9117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 11063636 - 11063555
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||||| ||||||||||||||| ||||||| ||| || ||| |||||||||| ||  |||||||| |||||||    
T  11063636 gagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaaatgggttt 11063555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 19940847 - 19940948
Alignment:
Q  13 agcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    ||||||| ||||  |||||||||||||||  ||||||||||||| |||||||||||||| | ||  | ||| | || ||||||||  |||||||||||||    
T  19940847 agcccacataaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactccaaggacccaagctaacaccaccagaccaacccaagtggg 19940946  T
Q  113 tt 114  Q
    ||    
T  19940947 tt 19940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 44126501 - 44126396
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||| |||||||  |||||  ||||||||  || ||||||||| | ||||||||||||| |||| || ||   ||||||||||||| ||||||||    
T  44126501 aaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaa 44126402  T
Q  108 gtgggt 113  Q
    ||||||    
T  44126401 gtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 45235348 - 45235456
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacct-gagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccca 106  Q
    |||||||||||||||||   ||| |||||||||| |||  | |||| || ||||||||||||||| |||  || ||||||||||||| |||  |||||||    
T  45235348 aaattagcccacctaaatcagcatcggagagaatagaagtttgagatctcgaggaggagcacactcccaagtcccaaaccaataccatcagaccaaccca 45235447  T
Q  107 agtgggttt 115  Q
    |||||||||    
T  45235448 agtgggttt 45235456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 51703859 - 51703779
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| |||||||| || ||||||||||||||||| ||||||  ||| |||||||||| ||  |||||||| ||||||    
T  51703859 gagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 1094631 - 1094568
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||  ||||||||||||||| |||  |||||||| | |||||||||||||    
T  1094631 aaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacact 1094568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 17410309 - 17410238
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| |||| ||||| || |||||||| |||||| ||||||| |||||||||||||| ||| ||||||||    
T  17410309 gagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 21694520 - 21694446
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| ||||||||||||||||||||   |||||| |||  || ||| |||||||||||||| |||||||||||||||    
T  21694520 agaatcgaacctgagaccttgaggag---cacactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 34228975 - 34228873
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  |||||||||||||||  ||||||||||||||| ||||| |||||| | || || ||| |||| ||||||||  |||| |||||||    
T  34228975 tagcccaccaaaattggcaccggagagaatccaacctgagaccttga-gaggaacacactccgaggtcccaagccaacaccaccagaccaactcaagtgg 34228877  T
Q  112 gttt 115  Q
    ||||    
T  34228876 gttt 34228873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 40810554 - 40810495
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaacc 86  Q
    |||||| |||||||| |||||||||||||||| ||||| |||||| ||||||| ||||||    
T  40810554 ggcaccagagagaatcgaacctgagaccttgaagaggaacacactcccagatcccaaacc 40810495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 52336744 - 52336839
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaac 103  Q
    ||||||||||| | |||  | |||| |||| ||| |||||||||| ||| |||||||||||||| ||||||| ||| |||||||||| ||| ||||    
T  52336744 aaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 9643800 - 9643866
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccacc 95  Q
    ||||||||| ||| ||| ||||||||||||||| || |||||| ||||||| ||| |||||||||||    
T  9643800 caccggagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaataccacc 9643866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 12662388 - 12662282
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||| |||||||||  ||||   |||| ||| ||||||||||| | ||||||||||||||||||  |||||||  |||||||| |||  ||||||||    
T  12662388 aaattagtccacctaaattggcattagagataatcgaacctgagacatcgaggaggagcacacttccgtatcacaagtcaataccatcagaccaacccaa 12662289  T
Q  108 gtgggtt 114  Q
    || ||||    
T  12662288 gtaggtt 12662282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 17745234 - 17745328
Alignment:
Q  16 ccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    |||||||||  | |||| |||||||| |||| |||||||| ||||||||||||||   ||| || ||| |||||||||| ||| |||||||||||    
T  17745234 ccacctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

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Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 30203216 - 30203262
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttc 73  Q
    |||| |||||||||| ||||||||||||||||||||||| |||||||    
T  30203216 ggcatcggagagaattgaacctgagaccttgaggaggagaacacttc 30203262  T

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Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 44961871 - 44961765
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||  |||||||| |||||||||||| ||||||||||||||||   | ||| ||| | ||||||||| |  ||||||||    
T  44961871 aaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgaccaacccaa 44961772  T
Q  108 gtgggtt 114  Q
    |||||||    
T  44961771 gtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 1247193 - 1247112
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| ||||||||||||||||||||||| ||||| |||| |  |||| || |||||| | | ||||||||||| ||||    
T  1247193 gagagaatcgaacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagccaacccaagtgagttt 1247112  T

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Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 3266004 - 3265967
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3266004 gagagaatcgaacctgagaccttgaggaggagcacact 3265967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 9224856 - 9224779
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    ||||||||| |||||||||||||  ||||| |||| |||  |||||| |||| ||||||||||||  |||||||||||    
T  9224856 ggagagaatcgaacctgagacctcaaggagaagcatactctcagatctcaaagcaataccaccagaccaacccaagtg 9224779  T

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Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 51281434 - 51281393
Alignment:
Q  31 ccggagagaatggaacctgagaccttgaggaggagcacactt 72  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  51281434 ccggagagaatcaaacctgagaccttgaggaggagcacactt 51281393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 10526903 - 10526843
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||| ||| ||||||||||||||||||||| ||| |||| || ||| ||||||||||    
T  10526903 gagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccac 10526843  T

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Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 31383771 - 31383855
Alignment:
Q  11 ttagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccacc 95  Q
    |||||||||| |||  ||||||  ||||||| ||||||||||||   |||||||||||||| |||| || ||| |||||||||||    
T  31383771 ttagcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccacc 31383855  T

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Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 43446050 - 43446006
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||    
T  43446050 ggcaccggggagaatcgaacatgagaccttgaggaggagcacact 43446006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 45266921 - 45266881
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagca 67  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  45266921 ggcaccggggagaatcgaacctgagaccttgaggaggagca 45266881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 15065071 - 15065008
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||||| |||  | |||||| || ||| ||||||||||||||||||| |||||||||    
T  15065071 aaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgaggatgagcacact 15065008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 23566309 - 23566372
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||| |||||||||||  | |||| |||||||| |||||||| ||||| ||||||||||||||    
T  23566309 aaatttgcccacctaaactgccaccagagagaatagaacctgaaacctttaggaggagcacact 23566372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 25297878 - 25297771
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| ||||||||||  | | |||| ||||||  ||||| |||||| |||||||||||||||  ||||||  ||  ||||||||| ||  ||||||||    
T  25297878 aaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaa 25297779  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  25297778 gtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 27476741 - 27476804
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||  |||||| ||||||||  ||| ||||| || |||||||||||||||    
T  27476741 aaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacact 27476804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 36428820 - 36428717
Alignment:
Q  6 caaaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccc 105  Q
    ||||| ||||||||| |||  |||||||| ||||||  ||| |||||||||||||||||||| ||| | || |  ||| |||| |||||| || ||||||    
T  36428820 caaaactagcccacccaaattggcaccggggagaatcaaacatgagaccttgaggaggagcatactccaaggtaccaagccaacaccacccggccaaccc 36428721  T
Q  106 aagt 109  Q
    ||||    
T  36428720 aagt 36428717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 37047054 - 37046984
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||||||||||| ||||||||||| | || || ||| |||| ||||||||  ||||||||||||||||    
T  37047054 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggttt 37046984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 42983344 - 42983443
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||| |||| ||||  |||||| |||||||| ||||||  |||||  ||||||| |||||| ||||||| |||  ||||||||||| | ||||||||    
T  42983344 aaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccatgccaacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 47753784 - 47753709
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttatat 119  Q
    |||||||||||||||||||||||||| | | ||||| |||  |||||| |||||| ||||| || |||||| ||||    
T  47753784 aacctgagaccttgaggaggagcacagtcctagatcccaagtcaatacgaccaggtcaacctaaatgggttaatat 47753709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 24047072 - 24047174
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||| |||||||  ||||| || |||||| |||| ||| |||| ||||||||||||||| |||  || ||| |||||||||  ||  ||||||||    
T  24047072 aaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaataccatgagaccaacccaa 24047171  T
Q  108 gtg 110  Q
    |||    
T  24047172 gtg 24047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 38947471 - 38947505
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||| |||||||||||||||||||||||||||||    
T  38947471 agaatcgaacctgagaccttgaggaggagcacact 38947505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 44046162 - 44046204
Alignment:
Q  52 accttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccac 44046204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 3800012 - 3799951
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcaca 69  Q
    |||||||||||||||||  |||||  |||||||| |||||||| || | |||||||||||||    
T  3800012 aaattagcccacctaaattggcactagagagaatcgaacctgaaacttcgaggaggagcaca 3799951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 4825041 - 4824968
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttat 117  Q
    ||||||||||||||| |||||||||||| | || || ||| |||| |||| |||  ||||||||||| ||||||    
T  4825041 aacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaagtgtgtttat 4824968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 6127961 - 6128045
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccag 97  Q
    ||||||||| |||  |||||||| |||||| |||| ||||||||||| ||||||||| || | || || |||||||| ||||||||    
T  6127961 tagcccaccaaaattggcaccggggagaatcgaacttgagaccttga-gaggagcacgctccaaggtcccaaaccaacaccaccag 6128045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 19020365 - 19020288
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| ||| |||||| ||| ||||| |||||||||| ||||| ||||| |||||||||||  |||| ||| ||||||    
T  19020365 agaattgaatctgagatcttaaggagaagcacacttctagatctcaaacgaataccaccagaccaactcaaatgggtt 19020288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 9570710 - 9570639
Alignment:
Q  47 ctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttatat 119  Q
    ||||||||||||||| ||||||||| | || || ||| |||| |||| || | ||||||||||||||||||||    
T  9570710 ctgagaccttgaggaagagcacactccaaggtctcaagccaacaccatca-gccaacccaagtgggtttatat 9570639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 17297091 - 17297027
Alignment:
Q  8 aaattagcccacctaaaggggcaccggag-agaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||||| |||  |||||||| | |||||  ||| ||||||||||||||||||||||||    
T  17297091 aaattagcccacccaaattggcaccgggggagaatcaaacatgagaccttgaggaggagcacact 17297027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 21392908 - 21392880
Alignment:
Q  43 gaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||||||||||||||    
T  21392908 gaacctgagaccttgaggaggagcacact 21392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 29753736 - 29753700
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggagg 63  Q
    |||||| |||||||| |||||||||||||||||||||    
T  29753736 ggcaccagagagaatcgaacctgagaccttgaggagg 29753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 29817746 - 29817674
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||||| ||||| ||||||||||||  ||| || |||  ||||| ||||||| ||||||||||| ||||    
T  29817746 gaacctgagaacttgaagaggagcacactctcaggtctcaagtcaatatcaccaggccaacccaagtgagttt 29817674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 34460879 - 34460987
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||| |||||||||  || ||| |||| ||| ||| |||||||||| ||||||| |||||||  || || |||  ||||||||| | | |||| |||    
T  34460879 aaattagtccacctaaattggaaccagagataattgaatctgagaccttcaggaggaacacacttttaggtctcaagtcaataccactaagccaactcaa 34460978  T
Q  108 gtgggttta 116  Q
    |||||||||    
T  34460979 gtgggttta 34460987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 39714753 - 39714856
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  |||||||  ||||||  ||| |||||||||||| ||||||||||| | ||||| ||| ||||  |||| | | ||||||||||||    
T  39714753 tagcccaccgaaatcggcaccgaggagaatcaaacttgagaccttgag-aggagcacactccaagatcccaagccaacgccactatgccaacccaagtgg 39714851  T
Q  112 gttta 116  Q
    |||||    
T  39714852 gttta 39714856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 48400269 - 48400178
Alignment:
Q  16 ccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaag 108  Q
    |||||||||  ||||||||||||||| | |||||||||||||| ||||||  | || | || || ||| ||||||||| |||| |||||||||    
T  48400269 ccacctaaattggcaccggagagaatcgcacctgagaccttga-gaggagtgcgctccaaggtcccaagccaataccatcaggccaacccaag 48400178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 52029906 - 52029970
Alignment:
Q  8 aaattagcccacctaaaggggcaccggag-agaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||||| |||  |||| ||| | ||||| ||||||||||||||||| |||||||||||    
T  52029906 aaattagcccacccaaattggcatcgggggagaatcgaacctgagaccttgagaaggagcacact 52029970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 968468 - 968362
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||| |||| || ||| |||||||||||||| |||| |||    
T  968468 aaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaa 968369  T
Q  108 gtgggtt 114  Q
    |||||||    
T  968368 gtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 23361619 - 23361725
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  | |||| |||||||| ||||||||||||||||||||||||||||| ||| ||| |||  ||||||||||||| ||||||||    
T  23361619 aaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaa 23361718  T
Q  108 gtgggtt 114  Q
    |||||||    
T  23361719 gtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 2203598 - 2203494
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||||| |||||| || |||||||||||||||||||||||||| |||| || ||| |||||||||| ||| ||||||||    
T  2203598 aaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 2203499  T
Q  108 gtggg 112  Q
    |||||    
T  2203498 gtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 28783166 - 28783059
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||||  |||||| |||| |||||||||||||||||||||||| |||| || ||| |||||||||||| | ||||||||    
T  28783166 aaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaa 28783067  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  28783066 gtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 3624685 - 3624582
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  | | ||||||||||| |||||||||||||||| |||||||||||| |||| || ||| |||||||||| ||| ||||||||    
T  3624685 aaattagcccacctaaattgac-ccggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaa 3624587  T
Q  108 gtggg 112  Q
    |||||    
T  3624586 gtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 29858019 - 29858124
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  |||||||  | |||| ||||||||||||| ||||||||||||||| || | || ||| |||||||||||||| ||| ||||    
T  29858019 aaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaa 29858118  T
Q  108 gtgggt 113  Q
    ||||||    
T  29858119 gtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 16852418 - 16852338
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| ||||||||||||| ||||||||||||||| |||| || ||| |||||||||| ||| |||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttta 16852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 19703485 - 19703565
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| |||||||||||||||||||||||||||||  ||| || ||| |||||||||| ||| |||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttta 19703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 33727873 - 33727949
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||||||||||||||||||||||||||||||||  || |||||| ||||||| |||||||||||| ||||||    
T  33727873 gaatcgaacctgagaccttgaggaggagcacacttccaagtctcaaacctataccactagggcaacccaaatgggtt 33727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 8485105 - 8484998
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||||||||||| |||  ||||||||  | ||||||||||||  ||| || ||| | |||||||||||| ||||||||    
T  8485105 aaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaa 8485006  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  8485005 gtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 18540385 - 18540298
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||||||||||||||||| || ||||| |||| || ||| |||||||||| ||| |||||||||||||||    
T  18540385 ggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 33017301 - 33017214
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |  ||| ||||||  || ||| |||||||||||||||    
T  33017301 ggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaacccaagtgggtt 33017214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 6536626 - 6536540
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||| ||||||||||  |||||| |||||||| ||||||||||||||||||||||||||||| | || || ||| ||||||||||    
T  6536626 aaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 6536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 40872978 - 40872876
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||  |||||||||||||||||||||| | ||||||| ||||||||||||   |||||  ||| ||||| ||||| | ||||||||||||    
T  40872978 tagcccacctaaattggcaccggagagaatggaacctaaaaccttgaagaggagcacactctaagatcctaaatcaatatcaccatgccaacccaagtgg 40872879  T
Q  112 gtt 114  Q
    |||    
T  40872878 gtt 40872876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 30774706 - 30774795
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccag 97  Q
    |||||||| ||| ||||  |||| |||||| ||| ||| ||||||||| |||||||| |||||||||||||| |||||||||||||||||    
T  30774706 aaattagctcacttaaattggcatcggagaaaatcgaatctgagacctcgaggaggaacacacttccagatcccaaaccaataccaccag 30774795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 36205279 - 36205198
Alignment:
Q  30 accggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||| |||||| |||| |||||||||||||||||||||||| ||||||| |||||||||| || |||  ||||||||||||    
T  36205279 accggggagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 4830558 - 4830486
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||||||||| |||||||| ||||||  |||||| ||||| |||||||||||| ||||||||||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 12988515 - 12988427
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| ||||| || |||||||| ||||||||||||||||||||||||| |  ||| |||||||||| ||| ||| ||||||||||||    
T  12988515 ggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggttt 12988427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 35641871 - 35641979
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||| |||||  ||  | ||||||||| ||||||||||| | ||||||||||||||| ||| ||| ||| || ||||||||||  ||||||||    
T  35641871 aaattagcccatctaaattggttctggagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaa 35641970  T
Q  108 gtgggttta 116  Q
    |||||||||    
T  35641971 gtgggttta 35641979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 3305158 - 3305241
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaatac 91  Q
    |||||||||||||||||  |||||| |||| ||| |||  ||||||||||||||||||||| || ||||||| |||||||||||    
T  3305158 aaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaatac 3305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 18897265 - 18897162
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||  |||||| |  ||||| |||| ||||||||||||||||||||||||   || || |||||||| ||||| ||| |||||||||||||||    
T  18897265 cccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T
Q  115 tata 118  Q
    ||||    
T  18897165 tata 18897162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 26688936 - 26688865
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||||||||||||||||||||| | || || ||| |||| ||||||||| |||||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 35287803 - 35287716
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||| | | ||| ||| |||| ||||||||| | |||||||||||||    
T  35287803 ggcaccggagagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtt 35287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 11819882 - 11819776
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||  ||| |||| ||||||||||||||||||||||||||||| |||  || ||| || ||||||| ||||||||||||    
T  11819882 aaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 11819783  T
Q  108 gtgggtt 114  Q
     ||||||    
T  11819782 atgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 3058023 - 3058127
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||  | | ||| ||||||| |||||||||||||||  |||||||||||| |||   | |||||||||||||||||  |||||||| |||    
T  3058023 tagcccacctaaattgacgccgaagagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaacccaaatgg 3058122  T
Q  112 gttta 116  Q
    |||||    
T  3058123 gttta 3058127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 6436555 - 6436631
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||| ||||||||||| ||||||||||||| | |  || ||| ||||||||||||||||||||||||||||||    
T  6436555 gaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 22268911 - 22269010
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||| |||||||||||| |||  ||| ||||||||||| || ||||||||| | || || ||| |||| ||||||||| |||||||||||||||    
T  22268911 cccacctaaatgggcaccggagaaaatcaaacttgagaccttga-gaagagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 22269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 27750806 - 27750730
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||||||||||||||||||||||||||||| |||  || ||| || ||||||| |||||||||||| ||||||    
T  27750806 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggtt 27750730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 30483880 - 30483960
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| |||||||||||  |||||||||||||||| ||| ||| ||| ||||||||||  || |||||||||||||||    
T  30483880 gagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 6530893 - 6530807
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| |||||| ||||||||||| ||||| ||||||||||| | || || ||| |||| ||||||||| |||||||||||||||    
T  6530893 ggcaccggggagaatcgaacctgagacattgag-aggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 44780120 - 44780191
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||||||||||||||||||||||| |||  || ||| ||||| |||| ||| ||||||||||||||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 8059710 - 8059632
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||||||||||||||||||||| ||||||  || ||  |||  |||||||| |||| |||||||||||||||    
T  8059710 gagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 8794341 - 8794419
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |  ||| |||||||||| | | ||| |||||||||    
T  8794341 gagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccactatgccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 35690055 - 35690129
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaac 103  Q
    |||| |||||||| ||||||||||||||||||||||||| ||  ||||||| ||| |||||||||| ||| ||||    
T  35690055 caccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 13129755 - 13129666
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| |||||||| |||||||| ||||||||||||||| |||| |||  || ||||||||| ||||  ||  ||||||||||||||||    
T  13129755 ggcaccagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaatgccactgggctaacccaagtgggttta 13129666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 11492043 - 11492146
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | ||| | ||||||| |||||| |||||| ||| ||||||||||| ||||||| ||| ||||||||  || | ||||||||    
T  11492043 aaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccgacatgccaacccaa 11492142  T
Q  108 gtgg 111  Q
    ||||    
T  11492143 gtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 28566210 - 28566104
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| ||||||||||   |||||  ||||||| |||| |||| ||||||| |||||||||||   || || |||||||||||||| ||| ||||||||    
T  28566210 aaattaacccacctaaattagcaccaaagagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccactaggtcaacccaa 28566112  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  28566111 gtgggttt 28566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 28573833 - 28573727
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| ||||||||||   |||||  ||||||| |||| |||| ||||||| |||||||||||   || || |||||||||||||| ||| ||||||||    
T  28573833 aaattaacccacctaaattagcaccaaagagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccactaggtcaacccaa 28573735  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  28573734 gtgggttt 28573727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 29431090 - 29431011
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| ||||||||| |||  |||||||||||||| |||  || ||| |||||||| ||||| |||||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 3826774 - 3826856
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttat 117  Q
    ||||||| |||||||||| || | |||||||||||||  || ||  ||| |||||||||| ||| ||||||||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggtttat 3826856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 11928730 - 11928808
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||| ||||||||||||| |||||||||||||||||||| | | |||| |||||||  ||| ||| |||| |||||||    
T  11928730 agaatcgaacctgagacctcgaggaggagcacacttccaggttataaactaataccattaggccaatccaaatgggttt 11928808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 5264611 - 5264542
Alignment:
Q  47 ctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||||||| ||||||||||||| | |||| |  ||| |||||||||| ||| |||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttta 5264542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 10287553 - 10287492
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccag 97  Q
    |||||| ||||||||||||| |||||| |||||||||||||||  ||| ||||||| |||||    
T  10287553 gagaattgaacctgagacctcgaggagaagcacacttccagatttcaagccaatactaccag 10287492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 14254780 - 14254727
Alignment:
Q  61 aggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||| ||||||| ||||||||||| || ||| |||||||||||||||    
T  14254780 aggagcacactcccagatctcaaaccaatacaactaggtcaacccaagtgggtt 14254727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 28787473 - 28787530
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacactt 72  Q
    ||||||||||  ||||| || ||||||  |||||||||||||||||||||||||||||    
T  28787473 cccacctaaattggcactggggagaatcaaacctgagaccttgaggaggagcacactt 28787530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 7140789 - 7140725
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagg 98  Q
    |||||||| ||| |||||| || ||||||||||||||  ||||||| ||| ||||||||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacacacccagatcccaagccaataccaccagg 7140725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 7286261 - 7286209
Alignment:
Q  60 gaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||| |||||||    
T  7286261 gaggagcacactcccagatcccaaaccaataccactaggtcaacctaagtggg 7286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 22193358 - 22193402
Alignment:
Q  32 cggagagaatggaacctgagaccttgaggaggagcacacttccag 76  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||    
T  22193358 cggagagaatcgaacctaagaccttgaggaggagcacactcccag 22193402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 5801099 - 5801044
Alignment:
Q  62 ggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttat 117  Q
    |||||||||| | ||||| ||| | |||||||||||| ||||||||||||||||||    
T  5801099 ggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggtttat 5801044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 6569768 - 6569847
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| |||| ||| ||||  |||||||||||||| ||||||| ||| |||||| ||| ||| ||||| |||||||||    
T  6569768 agagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 11793495 - 11793598
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  ||||||||  |||||  ||||| |||||||||||||||||||||| | || || ||| | || ||||| ||  ||||||||||||    
T  11793495 tagcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagaccaacccaagtgg 11793594  T
Q  112 gttt 115  Q
    ||||    
T  11793595 gttt 11793598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 16843768 - 16843827
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||| |||||  | ||||||||||||| |||||||||| |||| |||||||||||||    
T  16843768 tagcccatctaaattgacaccggagagaatcgaacctgagatcttgcggaggagcacact 16843827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 20994427 - 20994534
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgagg-aggagcacacttccagatcacaaaccaataccaccagggcaaccca 106  Q
    ||||||||||| | |||  || ||| |||| ||| || |||||||| |||||| ||||||||||| |||| || |||  ||||||||| ||| |||||||    
T  20994427 aaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactaggccaaccca 20994526  T
Q  107 agtgggtt 114  Q
    ||||||||    
T  20994527 agtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 23874387 - 23874458
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||||| ||||||| ||| | | |||| || ||| |||||||||| ||| |||||||||||||||    
T  23874387 gaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 27121059 - 27121008
Alignment:
Q  65 gcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||| ||||||| || ||| ||||||||||||||||||||||||| ||||||    
T  27121059 gcacgcttccaggtctcaagccaataccaccagggcaacccaagtaggttta 27121008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 4436081 - 4435979
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  ||  | ||||||||| ||  |||||||||||||||||||||| || |||  || ||| ||||||||| |||| ||||| ||    
T  4436081 aaattagcccacccaaattggggcaggagagaatcgagtctgagaccttgaggaggagcactctcccatgtctcaagccaataccagcaggtcaaccgaa 4435982  T
Q  108 gtg 110  Q
    |||    
T  4435981 gtg 4435979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 31408118 - 31408155
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  31408118 gagagaatcgaacctgaaaccttgaggaggagcacact 31408155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 34628723 - 34628666
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaata 90  Q
    ||||||||| ||||||||||| |||||||| | |||||| ||||||| ||| ||||||    
T  34628723 ggagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagccaata 34628666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 42327365 - 42327471
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  ||||||| ||||||| ||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| ||||||||    
T  42327365 aaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 42327464  T
Q  108 gtgggtt 114  Q
    |||||||    
T  42327465 gtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 37480181 - 37480074
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  || ||||| |||||| |||||||||||||||||||||||||||||  ||| || ||| |||||||||||||| ||||||||    
T  37480181 aaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaa 37480082  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  37480081 gtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 29503349 - 29503268
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttat 117  Q
    |||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||| ||| ||||||||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtttat 29503268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 42602660 - 42602551
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||||||||||||  ||||| |||||||||| ||||||||||| |||| || ||| |||||||||| ||| ||||||||    
T  42602660 aaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaa 42602561  T
Q  108 gtgggtttat 117  Q
    ||||||||||    
T  42602560 gtgggtttat 42602551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 12086099 - 12086203
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||   ||||||||| |||| ||||| |||||||||||||||||||||||||||| || ||| |||||||||||||| ||||  ||    
T  12086099 aaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggccaacttaa 12086198  T
Q  108 gtggg 112  Q
    |||||    
T  12086199 gtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 16918562 - 16918653
Alignment:
Q  22 aaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggt 113  Q
    |||| |||||| ||||||||  ||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  16918562 aaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 11251193 - 11251086
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||| ||||||||  | |||| ||||||||  ||||||||||||||||||||||||||||||||  || ||| |||||||||| | | ||||| ||    
T  11251193 aaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaa 11251094  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  11251093 gtgggttt 11251086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 39715098 - 39714991
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||  | || |||||| ||||||||||||| ||||||||||||||| |||| || |||  ||||||||||| | ||||||||    
T  39715098 aaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaa 39714999  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  39714998 gtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 23052493 - 23052599
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||  | |||||| |||||||||||||||||||| |||||||| |||  || ||| |||||||||||||| ||||| ||    
T  23052493 aaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaa 23052592  T
Q  108 gtgggtt 114  Q
    |||||||    
T  23052593 gtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 41908612 - 41908714
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  |||||||| || ||| |||| |||||||||||||||||||||||| | || || |||||| | ||||||||| ||||||||||||    
T  41908612 tagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgg 41908711  T
Q  112 gtt 114  Q
    |||    
T  41908712 gtt 41908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 21213877 - 21213768
Alignment:
Q  6 caaaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccc 105  Q
    ||||| |||||||||||||  |||||||| |||||| |||||||||||||  ||||||| |||||| |||| || ||| |||||||||||||  ||||||    
T  21213877 caaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaaccc 21213778  T
Q  106 aagtgggttt 115  Q
    | | ||||||    
T  21213777 atgcgggttt 21213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 7799024 - 7799112
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||| ||||||||| ||| |||||| || ||||||||||||||| |||  || ||| |||||||||||||| ||||||||||||||||    
T  7799024 ggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 42922502 - 42922414
Alignment:
Q  27 ggcaccggagagaatggaacctgagacctt-gaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||| |||| |  ||| |||||||||| ||| |||||||||||||||    
T  42922502 ggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 4060205 - 4060292
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||| |||||||| |||||||||| ||||||||| ||||||||  ||| |  |||||||||||||| ||| |||||||||||||||||    
T  4060205 caccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgggttta 4060292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 19322848 - 19322766
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||||||  |||| |||||||||| |||||||||||| |||| || |||||||||||||| ||  |||||||||||||||||    
T  19322848 gagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggttta 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 34041577 - 34041666
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| ||| ||||  ||||||||||||||||||||||||||||  ||||||  ||  ||||||||| ||| |||||||||||||||||    
T  34041577 ggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttta 34041666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 14500364 - 14500276
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| |||||||| ||| ||||||||| ||||||||||||||| ||||||| ||| |  ||||||| ||| ||| ||||||||||||    
T  14500364 ggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggttt 14500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 25637257 - 25637181
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaa 84  Q
    |||||||||||||||||  |||| |||||||||  ||||||||||||| ||| ||||||||||| ||||||| ||||    
T  25637257 aaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatcccaaa 25637181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 3001485 - 3001378
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||| ||||  |||||| |||| ||| |||||||||| ||  |||||||||||||| | ||||| |||  ||||||||| ||| ||||||||    
T  3001485 aaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaa 3001386  T
Q  108 gtgggttt 115  Q
    ||| ||||    
T  3001385 gtgagttt 3001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 4262295 - 4262354
Alignment:
Q  31 ccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaata 90  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||    
T  4262295 ccggagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 29197346 - 29197453
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||||  ||||| |||| |||||| |  |||||||||||||| |||  || |||  ||||||||||| | ||||||||    
T  29197346 aaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaa 29197445  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  29197446 gtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 37972001 - 37971938
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||| ||||  |||||||||||    
T  37972001 aaattagcccacctaaattggcaccggagagaatcgaacctgagactttgacaaggagcacact 37971938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 40416379 - 40416466
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||||||||||| |||||||||| ||| |||| |  |||  ||||||||| ||| |||||||||||||||    
T  40416379 ggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 19016137 - 19016031
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||| || ||||  |||||||| ||||||  ||| |||||||| ||||||||||||||| |||  || ||| ||||||||| |||  ||||||||    
T  19016137 aaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaa 19016038  T
Q  108 gtgggtt 114  Q
    |||||||    
T  19016037 gtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 19244215 - 19244109
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||  |||  |||||| |||||||| ||||||||||||||| |||||||||||||  ||| || |||  ||||||||  ||  ||||||||    
T  19244215 aaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaa 19244116  T
Q  108 gtgggtt 114  Q
    |||||||    
T  19244115 gtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 21195676 - 21195753
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||| ||||||||||||||||||||||||||||| |||  |  ||| || ||||||| |||||||||||| |||||||    
T  21195676 gaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactagggcaacccaaatgggttt 21195753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 30808617 - 30808725
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||| ||||||||   || |||| ||||||| ||| ||||||||||||||||||||| | |  ||| || ||| |||||| ||||||  ||||||||    
T  30808617 aaattagtccacctaagttggtaccgaagagaatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaa 30808716  T
Q  108 gtgggttta 116  Q
    |||||||||    
T  30808717 gtgggttta 30808725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 12801388 - 12801293
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    ||||||||||  || | |||||||| | ||||||||||| ||||||||||||| ||  ||||||| ||||| |||||||| ||| |||| ||||||    
T  12801388 cccacctaaattggtaacggagagagtcgaacctgagactttgaggaggagcatacccccagatcccaaactaataccactaggccaactcaagtg 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 17737629 - 17737680
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||| |||||||||||||||||||||||| |||  |||||||||||||||||    
T  17737629 gaacatgagaccttgaggaggagcacactcccaagtcacaaaccaataccac 17737680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 26545919 - 26545840
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||  ||| |||||||| ||| ||||||||||||||||||| ||| | ||||||||||   |||||||||||||||    
T  26545919 agagaatcaaacttgagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaacccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 1435169 - 1435064
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||| |||||||| |||| ||||||||||||||| |||||||| | | ||| ||| ||| |||||| | | ||||||||    
T  1435169 aaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaa 1435071  T
Q  108 gtgggtt 114  Q
    |||||||    
T  1435070 gtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 1729903 - 1729814
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| ||||||||  || || |||||| ||||||||||||||| |||  || ||| |||||||||| ||  |||||||||||||||||    
T  1729903 ggcaccagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttta 1729814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 6658462 - 6658393
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaac 103  Q
    |||||||| |||| |||||| |||||||| ||||||||||||| | ||||||||||| ||| ||| ||||    
T  6658462 gagagaatcgaacatgagactttgaggagaagcacacttccaggttacaaaccaatatcactaggccaac 6658393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 18259811 - 18259730
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| | |||||||||||||  ||||||||||||||  || ||| ||| |||||||||||||| |||| ||| ||||||    
T  18259811 ggagagagttgaacctgagacctataggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggtt 18259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 31573611 - 31573700
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccag 97  Q
    ||||||| |||||||||  | || || ||||||| ||||||||||| |  ||||||||||||||  |||||| |||||||||| ||||||    
T  31573611 aaattagtccacctaaattgacatcgaagagaatcgaacctgagacatcaaggaggagcacactctcagatctcaaaccaatatcaccag 31573700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 33569826 - 33569895
Alignment:
Q  6 caaaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttcca 75  Q
    ||||||||| |||| ||||   ||||| |||||||| ||||||||||||| ||||| |||||||||||||    
T  33569826 caaaattagtccacttaaattagcaccagagagaatcgaacctgagacctcgaggaagagcacacttcca 33569895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 5147675 - 5147755
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| ||| | ||||||||||| ||||||| ||| ||||||| |||  ||||||||| ||  |||||||||||||||    
T  5147675 gagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 11062440 - 11062360
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||  ||||||||||||||||||| |||||||| |||  |  ||| |||||| ||| ||| |||||||||||||||    
T  11062440 gagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 30359720 - 30359657
Alignment:
Q  48 tgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||||||||||||| | || || ||| |||| ||||||| | ||||||||||||    
T  30359720 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 32106653 - 32106566
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||||||| || ||  ||||||||||  |||||||||| | || || |||  ||| ||||||||| |||||||||||||||    
T  32106653 ggcaccggagagaatcgagcccaagaccttgagagggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtt 32106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 33839250 - 33839293
Alignment:
Q  28 gcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||| || ||||| |||||||||||||||||||||||||||||    
T  33839250 gcaccagaaagaattgaacctgagaccttgaggaggagcacact 33839293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 16381668 - 16381730
Alignment:
Q  52 accttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||||||| |||||  |||||| ||| || ||||||| ||| |||||||||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 26482170 - 26482093
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||||||||||| |||||||||||| | || || ||| |||| |||| |||| ||||| |||||||||    
T  26482170 gagaatcgaacctgagaccttga-gaggagcacactcctaggtcccaagccaacaccatcaggccaacctaagtgggtt 26482093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 37755976 - 37756046
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggt 113  Q
    |||| |||||||| ||| ||||||||| | |||| || ||| |||||||||||| | ||||||||||||||    
T  37755976 gaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 3697389 - 3697477
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||||  |||||| ||||| ||||||||||| |||||||| || | || || ||| ||||||||| |||  |||||||||||||||||    
T  3697389 ggcaccgaggagaatcgaaccagagaccttgag-aggagcactctccaaggtcccaagccaataccatcagaccaacccaagtgggttta 3697477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 4438978 - 4439055
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| |||| || |||||||||||||||||||||  |||||| |||   |||||||  ||| |||||||||||||||    
T  4438978 agaatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 6859308 - 6859357
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaa 83  Q
    |||||||| ||||||||||| |||| |||||||||||| ||| |||||||    
T  6859308 gagagaatcgaacctgagactttgaagaggagcacactcccatatcacaa 6859357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 13803575 - 13803538
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  13803575 gagataatcgaacctgagaccttgaggaggagcacact 13803538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 22363178 - 22363267
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||||||| |||| |||||| ||| ||||||| |||||||| | ||| ||  ||||||||||| | |||| |||| ||||||| ||||    
T  22363178 ggcaccggagggaatcgaaccttagatcttgaggcggagcacattcccaaattgcaaaccaatactatcaggccaactcaagtggattta 22363267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 23230600 - 23230661
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    ||||||||| |||||||  || ||||||||||||||||| |||| || |||| |||||||||    
T  23230600 ggagagaattgaacctggaactttgaggaggagcacactcccagttcccaaatcaataccac 23230661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 6760941 - 6760889
Alignment:
Q  60 gaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    |||||||| ||| ||||||| ||||||||||| |||||  |||||||||||||    
T  6760941 gaggagcatactcccagatcccaaaccaatactaccagaccaacccaagtggg 6760889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 12632824 - 12632768
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggagga 64  Q
    |||||||||||||||||  | |||||  |||||| ||||||||||||||||| ||||    
T  12632824 aaattagcccacctaaattgacaccgatgagaattgaacctgagaccttgagaagga 12632768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 25931085 - 25931005
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||| ||| ||||||| | |||||  | ||||||  ||| || |||||||||||||||||| |||||||| |||||||    
T  25931085 agagaatcgaatctgagacttcgaggataaacacactctcaggtcccaaaccaataccaccaggccaacccaaatgggttt 25931005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 26276426 - 26276398
Alignment:
Q  43 gaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||||||||||||||    
T  26276426 gaacctgagaccttgaggaggagcacact 26276398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 42860424 - 42860348
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||| |||||||| ||||||||||||||| |||| || |||  ||||| ||||||| |||| ||||| ||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtt 42860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 45026830 - 45026786
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||| ||||||||  ||| ||||||||||||||||||||||||    
T  45026830 ggcaccagagagaatcaaacatgagaccttgaggaggagcacact 45026786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 30579441 - 30579334
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  |||||| |||| ||| ||||||||||||||||||||| | ||||| |||| || ||| |||||||||||||| ||||||||    
T  30579441 aaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaa 30579342  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  30579341 gtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 17041008 - 17041092
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttata 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||  |||||||||||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggtttata 17041092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 26459399 - 26459486
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| |||||||||||||||    
T  26459399 ggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 2446414 - 2446307
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||| || ||||||||||||||| |||  || ||| ||||||||| |||  ||||||||    
T  2446414 aaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaa 2446315  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  2446314 gtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 19553555 - 19553454
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||  || ||||| |||||| |||||| |||||||||||||||||||||| |||| || ||| |||||||||||||| ||||||||| ||    
T  19553555 tagcccacctaaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggtc-caagccaataccaccaggccaacccaagcgg 19553457  T
Q  112 gtt 114  Q
    |||    
T  19553456 gtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 22760967 - 22760863
Alignment:
Q  10 attagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagt 109  Q
    ||||||||||  |||  |||| ||| |||||| ||||||||||||||||||||||||||||| |||| || |||  ||||||||||||  ||||||||||    
T  22760967 attagcccactcaaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagt 22760868  T
Q  110 gggtt 114  Q
    |||||    
T  22760867 gggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 38374573 - 38374676
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||  |||||||| |||||| |||||| ||||||||||||||||||||||   || || ||| |||| ||||||| | ||||||||||||    
T  38374573 tagcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgg 38374672  T
Q  112 gttt 115  Q
    ||||    
T  38374673 gttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 5579204 - 5579310
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| |||||| |||  |||||||| |||| |  |||||||||||||||||||||||||||| | || || ||| |||| ||||||||| ||||||||    
T  5579204 aaattatcccacccaaattggcaccggggagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaa 5579303  T
Q  108 gtgggtt 114  Q
    |||||||    
T  5579304 gtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 11720930 - 11721044
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  ||||| || |||||| ||| |||| ||||| |||||||||||| | |||| || ||| |||||||||||||| ||||| ||    
T  11720930 aaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccaccaggccaaccgaa 11721029  T
Q  108 gtgggtttatatgct 122  Q
    || ||||||||||||    
T  11721030 gttggtttatatgct 11721044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 15137659 - 15137553
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||| ||||||||  |||||||||||||||||||||||||||| | | ||| |||  || |||||||||| ||||||||    
T  15137659 aaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaa 15137560  T
Q  108 gtgggtt 114  Q
    |||||||    
T  15137559 gtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 25590717 - 25590611
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||  |||  | ||||| ||| ||| ||||| ||||||| ||||||||||||||| ||||||| ||| ||||||||| |||| ||||||||    
T  25590717 aaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaa 25590618  T
Q  108 gtgggtt 114  Q
    |||||||    
T  25590617 gtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 43591013 - 43590907
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||| ||  |||||  | |||||| ||||||||||| ||||||||||||||||| |||  || ||| |||||||||||||| ||||||||    
T  43591013 aaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 43590914  T
Q  108 gtgggtt 114  Q
     ||||||    
T  43590913 ctgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 48772044 - 48771938
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  || ||  | || ||| |||||||||||||  |||||||||||||| ||||||| ||| |||||||||||| | ||||||||    
T  48772044 aaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaa 48771945  T
Q  108 gtgggtt 114  Q
    |||||||    
T  48771944 gtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 33869436 - 33869521
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||||||| ||||| ||||||||||| |||||||||||||||| || ||| ||||||| || ||| |||||||||||||||    
T  33869436 caccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 41487465 - 41487361
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||||  ||||| |||||||||||||||||||| |   |||| |||  || ||| |||||||||||||| ||||||||    
T  41487465 aaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggagaa---cactcccaagtcccaagccaataccaccaggccaacccaa 41487369  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  41487368 gtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 43215264 - 43215183
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| ||||||||||||||||||||||||||||| | || || ||| |||||||||| ||  ||||||||||||||||    
T  43215264 gagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 18363776 - 18363696
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||  |||||||||||||||||||||||||||| ||| ||| ||| || ||||||| ||| |||||||||||||||    
T  18363776 gagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 39631924 - 39631844
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| ||||||||||||||||||||||||  ||| |||| || ||| |||||||||| ||| |||||||||||||||    
T  39631924 gagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 45709681 - 45709785
Alignment:
Q  11 ttagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    ||||||||||||||  || | |||||| ||| ||||||||||||| |||||||||||||||  |||||| ||| | |||||||| ||| |||||||| ||    
T  45709681 ttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatg 45709780  T
Q  111 ggttt 115  Q
    |||||    
T  45709781 ggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 5273564 - 5273666
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  ||||||||||| |||  ||||| ||||||||||||||||||||||   || || ||| |||| ||||||||| ||||||||||||    
T  5273564 tagcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgg 5273663  T
Q  112 gtt 114  Q
    |||    
T  5273664 gtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 21558234 - 21558173
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcaca 69  Q
    |||||| ||||||||||  |||||| |||||||| |||||||||||||||||||||||||||    
T  21558234 aaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 23552198 - 23552117
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||| |||||||||||||||||||||||| |||| || |||  ||||| ||| ||| ||||||||||||||||    
T  23552198 gagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 31835263 - 31835186
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttatatg 120  Q
    ||||||||||||||||||||||||||||| | ||  | ||| |||| ||||||||| ||||||||||||||| |||||    
T  31835263 gaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggttgatatg 31835186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 279924 - 279987
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||||| |||  ||||||||||||||| |||||||||||||| |||||||| |||||    
T  279924 aaattagcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacact 279987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 2883052 - 2882993
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||  | |||| |||||||| |||||||||||||||||||||||||||||    
T  2883052 tagcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacact 2882993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 7801251 - 7801180
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||||||||| |||||||||||| |||| || |||  ||||||||||||| ||| |||||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 13106778 - 13106860
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttat 117  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||| |||| |||||| || ||  |||||||| |||||||||    
T  13106778 gagagaatcgaacctgagaccttgaggaggagtacac-tccagatcccaaatcaatactactagatcaacccaactgggtttat 13106860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 29785290 - 29785357
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||| || ||||| |||| |||||||||||||||||||||||||||||||| ||| || |||||||    
T  29785290 ggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcctataccac 29785357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 30442567 - 30442488
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| |||||| |||||||||||||||||| ||| |||| || ||| ||||||||||  || |||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 48039636 - 48039723
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| | |||||| ||||||||||||||| | ||||||| ||| | ||||| ||| |||| ||||||||| |||||||||||||||    
T  48039636 ggcaccagggagaatagaacctgagaccttgcgaaggagcatactccaagatcgcaagccaacaccaccaggccaacccaagtgggtt 48039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 20952144 - 20952222
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||| ||| ||| ||||||  ||||||||||||||||| |||| || ||||||||||||| |||| ||||||||||||    
T  20952144 ggagataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  46 cctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    |||||||| ||||||||||||||||| ||||||| | | ||||||||| |||| |||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 25021345 - 25021411
Alignment:
Q  48 tgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| ||||||||||||||||| |||| || ||| |||||||||| ||| |||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 7721454 - 7721389
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||| |||||||| |||| |||||||||||||||||| ||||| |||| || ||||||||||||||    
T  7721454 caccagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccac 7721389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 33222455 - 33222390
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||| |||||||| ||||||||||||||||||| ||| |||||||||| || ||| ||||||||||    
T  33222455 caccagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccac 33222390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 41519235 - 41519335
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  | ||| | ||||||  ||||||||||||||||||||||||||||| | | ||| |||  ||||||||| ||| ||||||||    
T  41519235 aaattagcccacctaaattgacacag-agagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaa 41519333  T
Q  108 gt 109  Q
    ||    
T  41519334 gt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 42836008 - 42836077
Alignment:
Q  45 acctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| ||||||||| ||||||||| |||| || ||| |||||||||| ||| |||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 37233580 - 37233648
Alignment:
Q  46 cctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||| |||||||||||||| ||| ||| ||| |||||| ||||| | |||||||||||||||    
T  37233580 cctgagaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtt 37233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 14058334 - 14058251
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||||||| ||||||||||||||||||| |||||||||  ||| |  |||  ||||||||||||| |||| |||| |||||||    
T  14058334 ggagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttta 14058251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 14368362 - 14368279
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||||||| ||||||||||||||||||| |||||||||  ||| |  |||  ||||||||||||| |||| |||| |||||||    
T  14368362 ggagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttta 14368279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 15905672 - 15905746
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||| |||||||||||||  |||||||||||||| |||| || ||| |||||||| ||||| ||||||||||||    
T  15905672 gagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 18056745 - 18056808
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||||| |||   ||||||| |||||| |||||||||||||| ||||||||||||||    
T  18056745 aaattagcccacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacact 18056808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 30217958 - 30217915
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagat 78  Q
    ||||||| |||| |||||||||||||||||||||||||||||||    
T  30217958 agagaatcgaacttgagaccttgaggaggagcacacttccagat 30217915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 45976937 - 45976996
Alignment:
Q  52 accttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||| |||||||||||||| |||| |||||| |||||||||| ||| ||||||||||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 3280495 - 3280561
Alignment:
Q  48 tgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||||||||||||||||  | | || ||| |||||||||||| | |||||||||||||||    
T  3280495 tgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgggtt 3280561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 5668564 - 5668626
Alignment:
Q  31 ccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaatacca 93  Q
    ||||||||||| || |||||||||| |||||||||||||||||||  || ||| |||||||||    
T  5668564 ccggagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 9183161 - 9183231
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagat 78  Q
    ||||||||||||| |||  | |||| |||| ||| ||||||||||| ||||||||||||||||| ||||||    
T  9183161 aaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactcccagat 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 20335801 - 20335907
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||| | |||  | || ||| |||||| ||||||||||||| ||||||||||||||| |||  || ||| |||||||| | ||  ||||||||    
T  20335801 aaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaa 20335900  T
Q  108 gtgggtt 114  Q
    |||||||    
T  20335901 gtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 23595797 - 23595727
Alignment:
Q  46 cctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||| |||||||||||||||||||| | ||||| |||  ||||||||||||  ||||||||||| |||||    
T  23595797 cctgataccttgaggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtgagttta 23595727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 29385711 - 29385817
Alignment:
Q  6 caaaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccc 105  Q
    ||||| ||||||||| |||  ||||||  |||||||  |||||||||||||||||||||||||||| | |  || ||| |||| |||| | || ||||||    
T  29385711 caaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaaccc 29385810  T
Q  106 aagtggg 112  Q
    |||||||    
T  29385811 aagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 48125149 - 48125250
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  |||||||| || ||| ||||||||||||||  ||||||||||||| | || || ||| |||| ||||||||  ||||||||||||    
T  48125149 tagcccaccgaaattggcaccggggaaaattgaacctgagaccttc-ggaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgg 48125247  T
Q  112 gtt 114  Q
    |||    
T  48125248 gtt 48125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 2962539 - 2962479
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||| |||||||||| ||||||||||||||||||  ||| |  ||||||||||||||    
T  2962539 gagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccac 2962479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 7744102 - 7744186
Alignment:
Q  28 gcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    ||||| ||||||||  |||||||||||||||||||||||| | | |||||||  || || ||||||| ||| ||||| |||||||    
T  7744102 gcaccagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 9608625 - 9608685
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||| ||| || |||||||    
T  9608625 gagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccac 9608685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 9836197 - 9836257
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||| ||| || |||||||    
T  9836197 gagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccac 9836257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 25655217 - 25655305
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| |||||||| |||||||| ||||||||||||| ||||||  |||||| |||  ||||||||| |   ||||||| ||||||||    
T  25655217 ggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggttt 25655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 29196985 - 29196905
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||| |||||||||||||||| || |||||||||||||  || |||||||||| ||| ||| |||| || |||||||    
T  29196985 gagaaaatcgaacctgagaccttgaagacgagcacacttccaagtcccaaaccaatatcactaggtcaactcatgtgggtt 29196905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 33460396 - 33460500
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttga-ggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    |||||||| ||||  | |||||| |||||| ||| |||||||||||| |||||| |||||| | || || ||||||||||||||||   ||||||| |||    
T  33460396 tagcccacataaattgacaccggggagaatcgaatctgagaccttgaaggaggaccacactcctaggtcccaaaccaataccaccaaaccaacccaggtg 33460495  T
Q  111 ggttt 115  Q
    |||||    
T  33460496 ggttt 33460500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 23301599 - 23301678
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||  ||| ||||||||  |||||||||||||| |||  || |||  ||||||||||||| |||||||||||||||    
T  23301599 agagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 24513868 - 24513797
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||||||  ||||| || ||||| ||| ||| ||| |||||||||| ||| |||||||||||||||    
T  24513868 gaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 29916806 - 29916841
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||| |||||||||||||||||||||||||||||    
T  29916806 gagaatcgaacctgagaccttgaggaggagcacact 29916841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 33181180 - 33181287
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||  ||| |||| |||||||||| ||||||  |||||||||| |||  || ||| || ||||||| ||||||||||||    
T  33181180 aaattagcccacccaaattgacactagagggaatcgaacctgagatcttgagttggagcacactcccaagtcccaagcctataccactagggcaacccaa 33181279  T
Q  108 gtgggttt 115  Q
     |||||||    
T  33181280 atgggttt 33181287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 37085547 - 37085618
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| |||||||| |||| ||||| ||||||||| ||| ||| ||| |||||||||||| | ||||||||    
T  37085547 gagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgccaacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 41519080 - 41519143
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||||| |||  | ||||||||| ||| ||| ||||||||||||| |||||||||||    
T  41519080 aaattagcccacccaaattgacaccggagataatcgaatctgagaccttgagaaggagcacact 41519143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 42712064 - 42712001
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||  | |||  | |||||| |||| ||||||||||||||||||||||||    
T  42712064 aaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacact 42712001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 4161366 - 4161288
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||| ||| ||| |  ||||||||||||| ||||| ||| |||||||||||||  |||||||| ||||||    
T  4161366 gagaatcgaacctaagatcttcaaaaggagcacacttcaagatcccaagccaataccaccagaccaacccaaatgggtt 4161288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 4572267 - 4572317
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttga 58  Q
    ||||||||||||| |||  | ||||||||||||| ||||||||||||||||    
T  4572267 aaattagcccacccaaattgacaccggagagaatcgaacctgagaccttga 4572317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 22932682 - 22932787
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||| ||||| |  ||||||||| |||||  | |||| |||| |||| || ||| ||||||||||||   ||||||||    
T  22932682 aaattagcccacctaaattggcaccg-agagattcaaacctgagatcttgaataagagcgcactcccaggtcccaagccaataccaccataccaacccaa 22932780  T
Q  108 gtgggtt 114  Q
    |||||||    
T  22932781 gtgggtt 22932787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 25956291 - 25956368
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||| |||||||||| ||||||||||| | || || ||| |||||||||| ||| |||||||| ||||||    
T  25956291 gagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 37094815 - 37094777
Alignment:
Q  48 tgagaccttgaggaggagcacacttccagatcacaaacc 86  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  37094815 tgagaccttgaggaggatcacacttccagatcccaaacc 37094777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 11700245 - 11700212
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagca 67  Q
    |||||||| |||||||||||||||||||||||||    
T  11700245 gagagaatcgaacctgagaccttgaggaggagca 11700212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 39499718 - 39499795
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| |||| ||||||||| | ||||| ||||||  ||| || ||| |||||||||| ||| |||||||||||||||    
T  39499718 agaatcgaacatgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 17113875 - 17113795
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| |||| ||||||||||||||| |||||||| |||| |   || ||||||| || ||| || ||||||||||||    
T  17113875 gagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaactaggccaccccaagtgggtt 17113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 30301957 - 30301925
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcaca 69  Q
    ||||| |||||||||||||||||||||||||||    
T  30301957 agaatcgaacctgagaccttgaggaggagcaca 30301925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 47824591 - 47824635
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttc 73  Q
    ||||||||| ||| |||| |||||| |||||||||||||||||||    
T  47824591 caccggagacaatcgaacatgagactttgaggaggagcacacttc 47824635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 48959281 - 48959241
Alignment:
Q  31 ccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||| |||| ||||||||||||||||| ||||||    
T  48959281 ccggagagaatcgaacatgagaccttgaggaggaacacact 48959241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 49050468 - 49050524
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||||  |||||||| |||||| |||||||||||||  |||||||| |||||    
T  49050468 cccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggagtacact 49050524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 51250492 - 51250599
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||||||| |||| |||| ||||| ||||||| |||||||||| ||||||| ||| |||||||||||||| ||||||||    
T  51250492 aaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaa 51250591  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  51250592 gtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 37109340 - 37109432
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttatat 119  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| ||||||||||||||| ||||    
T  37109340 ggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttaatat 37109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 7949424 - 7949531
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  | |||| |||||||| ||||||||||||||||||||||||||||| | || || ||| |||||||| | ||| || |||||    
T  7949424 aaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaa 7949523  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  7949524 gtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 19238547 - 19238653
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  || ||||| |||||| ||||| ||||||| ||||||||||||||| |||  || ||| |||||||||||||| ||||||||    
T  19238547 aaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 19238646  T
Q  108 gtgggtt 114  Q
    |||||||    
T  19238647 gtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 28635802 - 28635696
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||| |||||||| |||||| ||||||  |||||||||||||| ||||||| |||  || |||||||||| ||||||||    
T  28635802 aaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaa 28635703  T
Q  108 gtgggtt 114  Q
    |||||||    
T  28635702 gtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 55427170 - 55427276
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||||  |||||| ||||||||||||| ||| ||||||| ||| |||| || ||| |||||||||||||| ||||||||    
T  55427170 aaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaa 55427269  T
Q  108 gtgggtt 114  Q
    |||||||    
T  55427270 gtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 12798764 - 12798683
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||||||| |||| |||||| |||||||| ||||||| ||||||||||||||  || ||||||||||||||||    
T  12798764 gagagaatcgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggttt 12798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 9241030 - 9241101
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||| ||| ||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||    
T  9241030 gaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 37274429 - 37274536
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaa-taccaccagggcaaccca 106  Q
    |||||||||||| ||||   ||||| |||||||| |||||| |||||||||||||||||||||| |||| || ||| |||| ||| || ||| |||||||    
T  37274429 aaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaaccca 37274528  T
Q  107 agtgggtt 114  Q
    ||||||||    
T  37274529 agtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 37720212 - 37720291
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| ||||||| ||||||||||||| ||||||| |||| || ||| |||||| ||||||| ||||||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggttt 37720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 38869855 - 38869788
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||| ||| |||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  38869855 ggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccac 38869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 39509176 - 39509070
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| ||||||||||  | ||| || |||||| ||||||||||||| ||||||||||||||| ||||||| ||| ||| |||||  ||  ||||||||    
T  39509176 aaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaa 39509077  T
Q  108 gtgggtt 114  Q
    |||||||    
T  39509076 gtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 41346962 - 41347036
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||| ||||||||||| | ||||||||||| ||| ||||||| ||||||||||||| |||| ||||||||||||    
T  41346962 agaatcgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 49576889 - 49576963
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||| ||||||||||||||||||||||||||||| |||  ||  || |||||||||||||| ||||||||    
T  49576889 ggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 32003156 - 32003087
Alignment:
Q  47 ctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||||||||| || |||||||||| |||||| |||||||||||||||| | |||| ||||||||||||    
T  32003156 ctgagaccttgaagatgagcacactttcagatctcaaaccaataccaccaagtcaactcaagtgggttta 32003087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 51948561 - 51948480
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||| ||||||||||||| ||||||| ||||||| | ||||| |||  |||||| |||||| |||||||||||||||    
T  51948561 ggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 31826685 - 31826609
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||| ||||||||||||||||||||||||  || ||| ||| || ||||||| |||||||||||||||||||    
T  31826685 gaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 30938196 - 30938275
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    ||||||||||  ||||  || |||||| ||||||||||||| ||||||||||||||| | ||||| ||||||||||||||    
T  30938196 cccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccac 30938275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 33619293 - 33619206
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| ||||||| |||||| ||||||  ||||||| ||| || |||||||  || |||||||||||| |||||||||||||||||    
T  33619293 ggcaccgaagagaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 46295199 - 46295140
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||| |||  |||||||| |||||| |||||||||||||||||||||||||||||    
T  46295199 tagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacact 46295140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 1730479 - 1730565
Alignment:
Q  28 gcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| |||||||| ||| ||||||| |||| ||||||||||||  ||| || ||| |||||||||| ||| |||||||||||||||    
T  1730479 gcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 8030174 - 8030280
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||  ||| |||| |||| |||||||||||||||||||||||| |||  || ||| || ||||||| ||||||| ||||    
T  8030174 aaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaa 8030273  T
Q  108 gtgggtt 114  Q
    |||||||    
T  8030274 gtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 31802042 - 31802124
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| | |||| ||||||||||||||||| ||||||||||||||||||  ||||| |||| |   ||||||||||||||||    
T  31802042 gagagagtcgaacatgagaccttgaggaggaccacacttccagatcacaagtcaatatcaccggattaacccaagtgggttta 31802124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 47044795 - 47044717
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| ||||||||||||| ||||||||||| |||  |||||| |||  ||||||||||||| ||| |||||||||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 7292794 - 7292871
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||| ||||||||||| ||||||||||||||||| |||| |  ||| |||||||||| ||  ||||||||||||    
T  7292794 gagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 19680777 - 19680866
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| |||||||| |||||| |||||||||||| ||||||||| |||  || ||| | |||||||| ||| ||| |||||||||||||    
T  19680777 ggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggttta 19680866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 31759657 - 31759734
Alignment:
Q  37 agaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| ||| ||||||||||||||||||||||||| |||  || ||| |||||||||| ||  |||||||||||||||    
T  31759657 agaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 21660140 - 21660224
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttata 118  Q
    |||| ||| |||| |||||||| ||||| ||||||||| ||||||| |||  ||||||||||||  |||||||||| ||||||||    
T  21660140 gagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtttata 21660224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 21668904 - 21668988
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttata 118  Q
    |||| ||| |||| |||||||| ||||| ||||||||| ||||||| |||  ||||||||||||  |||||||||| ||||||||    
T  21668904 gagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtttata 21668988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 23378036 - 23377980
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaata 90  Q
    |||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||    
T  23378036 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 43728500 - 43728413
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccacca 96  Q
    ||||||||||||||||   | ||| ||| ||||| ||||||||||| ||||||||||||||||| |||||||| ||  |||||||||||    
T  43728500 aaattagcccacctaagttgacactgga-agaattgaacctgagactttgaggaggagcacactcccagatcataagtcaataccacca 43728413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 46545791 - 46545711
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||| ||| |||||| ||||||||||||||||||  ||| || ||| |||||||||| ||| |||||||||||||||    
T  46545791 gagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 2185021 - 2185112
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccc-aagtgggtttat 117  Q
    |||| |||||||||| ||||||||||| ||||| ||||||||||| |||| |  ||| ||| |||||| ||| |||||| ||||||||||||    
T  2185021 ggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggccaacccgaagtgggtttat 2185112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 4249264 - 4249177
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| ||||||||  |||||||||||||||||||||||||||| | | ||| ||| || ||||||| ||| ||| | |||||||||    
T  4249264 ggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 44194973 - 44195040
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||| |||||||| |||| |||||||||||| || | |||||||||||||  ||||||||||||||    
T  44194973 ggcaccagagagaattgaacatgagaccttgagaagaaacacacttccagattccaaaccaataccac 44195040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 44865421 - 44865334
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| || |||||| |||||| ||||||||||||||||||||| || ||  | ||| |||| |||| |||| |||||||||||||||    
T  44865421 ggcacaggggagaatcgaacctaagaccttgaggaggagcacacatcaaggactcaagccaacaccatcaggccaacccaagtgggtt 44865334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 51622591 - 51622528
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||| ||||||| |||  |||||| |||||| | |||||||||||||||||||||||||||||    
T  51622591 aaattggcccacccaaattggcaccagagagagtcgaacctgagaccttgaggaggagcacact 51622528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 2622384 - 2622475
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaacc----aataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| ||||||||||| | ||||||||||||||| |||| || ||| ||    |||||||| ||| |||||||||||||||    
T  2622384 ggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 8325353 - 8325455
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  | |||||| |||||| |||||| |||||||||||| ||||||||| | || || ||| |||| |||||| |  ||||||||||||    
T  8325353 tagcccacccaaattgacaccggggagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgg 8325452  T
Q  112 gtt 114  Q
    |||    
T  8325453 gtt 8325455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 2732096 - 2732043
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggag 65  Q
    ||||||||| |||  ||||||||||||||| ||||||||||| |||||||||||    
T  2732096 tagcccacccaaattggcaccggagagaatcgaacctgagactttgaggaggag 2732043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 21775927 - 21775980
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccacca 96  Q
    |||| ||||||||||||||||||||||||| ||||||  |||| ||||||||||    
T  21775927 gaacttgagaccttgaggaggagcacactttcagatcctaaactaataccacca 21775980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 29195174 - 29195094
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||| || ||||||||| ||||||||||| | || || ||| |||| ||||||||| ||||||||||||||||    
T  29195174 gagagaatcgaacttgcgaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttt 29195094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 5118985 - 5119077
Alignment:
Q  15 cccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaa-accaataccaccagggcaaccca 106  Q
    ||||||||||  | || |||||||||| |||||| ||| ||  ||||| ||||||||||||| ||||||  |||||||||||||| |||||||    
T  5118985 cccacctaaattgacatcggagagaattgaacctaagatctcaaggagcagcacacttccaggtcacaagcccaataccaccaggccaaccca 5119077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 7539670 - 7539610
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||| ||||||||||||||||| ||||||| ||| |||||||  ||| |||||||||    
T  7539670 gagagaatcgaacctgagaccttgagaaggagcatactcccagatccaaaatcaataccac 7539610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 21344918 - 21344815
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||  | ||| || |||||| |||| |||||||||||| ||||||||||| | || || ||| |||| | || |||| ||||||||||||    
T  21344918 tagcccacctaaattgacactggggagaattgaacatgagaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgg 21344820  T
Q  112 gttta 116  Q
    |||||    
T  21344819 gttta 21344815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 24234725 - 24234649
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    |||||||| |||| ||||||||| |||| ||||||||| |||  || ||| ||||||||||| || |||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacctggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 37443805 - 37443702
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||| ||||  |||||| |||| ||| |||| ||| |||| |||||| |   |||| ||||||| ||| |||||||||| ||| ||||||||    
T  37443805 aaattagcccacataaattggcaccagagataatcgaacatgaaacctcgaggagta---cactcccagatcccaagccaataccactaggtcaacccaa 37443709  T
Q  108 gtgggtt 114  Q
    |||||||    
T  37443708 gtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 51969104 - 51969044
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaacca 87  Q
    |||||| |||||||  |||||||| |||||||||||||||||||| ||| ||| |||||||    
T  51969104 ggcaccagagagaaatgaacctgaaaccttgaggaggagcacactcccaaatctcaaacca 51969044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 16581780 - 16581713
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||| |||| ||| ||||||||||||||||||||||||| ||| |||| |  ||| ||||||||||    
T  16581780 ggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaataccac 16581713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 17618352 - 17618281
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||||||| ||||||||||||||| |||| || ||| |||||||||||| | |  ||||||||||||    
T  17618352 gaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 20770998 - 20770911
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||| |||||||||||| |||| ||||| |||||||  ||| |||||| | | ||| |||| ||||||||||    
T  20770998 ggcacctgagagaatcgaacttgagaccttgagaaggaacacacatccagatttcaagccaatatccctaggccaacgcaagtgggtt 20770911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 38838903 - 38838844
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagca 67  Q
    ||||||||||||| |||  | || |||||||||| |||||| ||||||||||||||||||    
T  38838903 aaattagcccaccgaaattgccatcggagagaatcgaacctaagaccttgaggaggagca 38838844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 55256173 - 55256275
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagg-gcaacccaagtg 110  Q
    ||||||||| |||  |||||||  |||||| ||||||||| |||||||| | |||||||| | |  |||||| ||||||||||||||  |||||||||||    
T  55256173 tagcccaccaaaattggcaccgaggagaatcgaacctgaggccttgagg-gaagcacactccaatgtcacaagccaataccaccaggcccaacccaagtg 55256271  T
Q  111 ggtt 114  Q
    ||||    
T  55256272 ggtt 55256275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 56410037 - 56409951
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| | |||||| |||||||||||||||| |||||||||||| | || || ||| |||| | ||||||| || ||||||||||||    
T  56410037 ggcaccagggagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaacagcaccaggccagcccaagtgggtt 56409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 4923630 - 4923548
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||||| ||| |||||||||||| || |||||||||| ||  |  |||||||||| ||| ||| |||||||||| ||||||    
T  4923630 gagagaattgaatctgagaccttgacgatgagcacactttcaagttccaaaccaataacactaggccaacccaagtaggttta 4923548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 13015533 - 13015447
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||| ||||||||||  | |||| |||||||| |||| |||||| | ||||||||||||||| |||  || ||| ||||||||||    
T  13015533 aaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccac 13015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 20609000 - 20608922
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||| ||||||||||| ||| | |||||| || |||| ||| ||||||||| |||  |||||||||||||||    
T  20609000 gagaatcgaacttgagaccttgatgagaaacacactcccggatctcaagccaataccatcagatcaacccaagtgggtt 20608922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  65 gcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||| ||||||| ||| |||||||||| ||| ||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 32992697 - 32992655
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||| |||||| |||| ||||||||||||||||||||||||    
T  32992697 caccggggagaatcgaacttgagaccttgaggaggagcacact 32992655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 37980146 - 37980219
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    |||||| |||||||||||||||| |||||||||||| | || || ||| |||| | ||||||| |||||||||||    
T  37980146 gagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaacatcaccaggccaacccaagtg 37980219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 38206132 - 38206201
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||||||||| ||||||||||| | || || ||| |||  ||||||||| |||||||||||||||    
T  38206132 aacctgagaccttgag-aggagcacactccaaggtcccaagccagcaccaccaggtcaacccaagtgggtt 38206201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 42281240 - 42281309
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||||||||| ||||||||||| | || || ||| |||| |||||| || |||||||||||||||    
T  42281240 aacctgagaccttgag-aggagcacactacaaggtcccaagccaacaccacctggccaacccaagtgggtt 42281309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 53496957 - 53496899
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaatacc 92  Q
    ||||||||  || ||||||| ||||||||||||||||| |||| || ||||||||||||    
T  53496957 gagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaatacc 53496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 4483290 - 4483327
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggagga 64  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  4483290 ggcaccggaaagaattgaacctgagaccttgaggagga 4483327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 8714776 - 8714680
Alignment:
Q  17 cacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||  ||||| | |||||||  || |||| ||||||||||||| ||| ||  |||||| |||||||||||||| | || ||||||||||||||    
T  8714776 cacctaaattggcactgaagagaatcaaatctgaaaccttgaggaggaacacgctctcagatcccaaaccaataccacta-ggtaacccaagtgggtt 8714680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 11842910 - 11842947
Alignment:
Q  28 gcaccggagagaatggaacctgagaccttgaggaggag 65  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  11842910 gcaccggatagaattgaacctgagaccttgaggaggag 11842947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 24827896 - 24827823
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||||||||||| |||||||||| |||| |||| || |||  |||||||||| |  ||||| |||||||||||    
T  24827896 gaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggttta 24827823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 46329251 - 46329202
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccag 76  Q
    ||||||||  ||||| |||||||| |||||||||||||||||||| ||||    
T  46329251 ggcaccgggaagaatcgaacctgataccttgaggaggagcacactcccag 46329202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 19531972 - 19532032
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcac 68  Q
    |||||||||||||||||  |||| | |||||||| |||||||| | ||| |||||||||||    
T  19531972 aaattagcccacctaaattggcatcagagagaatcgaacctgaaaacttaaggaggagcac 19532032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 34075588 - 34075516
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaaccca 106  Q
    ||||||||  |||||||||||||||| ||||| ||| |   ||||| |||||||||||||||||  |||||||    
T  34075588 gagagaatctaacctgagaccttgagaaggagtacattcatagatctcaaaccaataccaccagaccaaccca 34075516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 40283956 - 40284060
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||    |||||  ||||| |||||||||||||  ||||||| |||  || ||| ||||||||| || | ||||||||    
T  40283956 aaattagcccacctaaattggcaccaagcagaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaa 40284055  T
Q  108 gtggg 112  Q
    |||||    
T  40284056 gtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 40813310 - 40813394
Alignment:
Q  30 accggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||| || ||||||||||| | ||  ||||||||||| ||||||| || ||||||| ||| ||| |||| ||| ||||||    
T  40813310 accggagagtatcgaacctgagacttcgaaaaggagcacactcccagatcccagaccaatatcactaggtcaacacaactgggtt 40813394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 15293 - 15399
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  |||| | |||||||| ||||||||||||| ||||||||||||||| |||| || ||| |||||||||||||  ||||||||    
T  15293 aaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaa 15392  T
Q  108 gtgggtt 114  Q
    |||||||    
T  15393 gtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 33549210 - 33549103
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||| ||||||||  |||| | |||||||| ||||||||||||| ||||||||||||||| |||| || ||| |||||||||||||  ||||||||    
T  33549210 aaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaa 33549111  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  33549110 gtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 30127506 - 30127400
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| || |||||||  ||||||||| ||||| ||||||||||||| || |||||||||||| ||||| | ||| |||||||||||||  ||||||||    
T  30127506 aaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaa 30127407  T
Q  108 gtgggtt 114  Q
    |||||||    
T  30127406 gtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 12188299 - 12188380
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||| ||| |||||||||||||||||||| |||| || ||| |||||||||| ||| ||||||||||||||||    
T  12188299 gagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 31622961 - 31623069
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | |||||||| || |  |||||||||||| ||||||||||||||| |||| || ||| ||||||||||| |  ||||||||    
T  31622961 aaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaa 31623060  T
Q  108 gtgggttta 116  Q
    |||||||||    
T  31623061 gtgggttta 31623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 10338174 - 10338252
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||| ||||||||||||||||||||||||||||| | || || ||| |||||||||||| | ||||||||||| |||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttta 10338252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 14558040 - 14557962
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| ||||||||||||  |||||||||||||||||||| || ||| |||| ||||||||  |||||||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 12234477 - 12234585
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| |||| |||||  | ||| ||||||||| ||||||||||||| |||  |||||||||| |||| || |||  ||||||||||||| ||||| ||    
T  12234477 aaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaa 12234576  T
Q  108 gtgggttta 116  Q
    |||||||||    
T  12234577 gtgggttta 12234585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 13227154 - 13227234
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| |||| |||||| | ||||||||||||||| ||||||| || |||||||||||  || |||||||||||||||    
T  13227154 gagagaatcgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtt 13227234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 6385968 - 6385881
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccacc 95  Q
    ||||||||||||| |||   |||||||||||||| |||||||||||||| |||||||||||| | |||| || |||  ||||||||||    
T  6385968 aaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccacc 6385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 20744504 - 20744587
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    ||||| ||| |||| ||||||||||||||||| |||||||||| |||| || |||||||||| | | |||| ||||||||||||    
T  20744504 ggagataatcgaacatgagaccttgaggaggaacacacttccatatcaaaatccaataccacgaagccaactcaagtgggttta 20744587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 21418576 - 21418470
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||| ||  |||||  | |||||| |||| |||||| | ||||||||||||||| |||  || ||| |||||||||||||| ||||||||    
T  21418576 aaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 21418477  T
Q  108 gtgggtt 114  Q
     ||||||    
T  21418476 ctgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 24333999 - 24334101
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||| |||  |||||||| |||||| ||||||||||||||||||||||||| ||| | |  || ||| |||| |||| | || ||||||||||||    
T  24333999 tagcccacccaaattggcaccggtgagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagccaacaccatccggccaacccaagtgg 24334098  T
Q  112 gtt 114  Q
    |||    
T  24334099 gtt 24334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 24641160 - 24641266
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||  |  |||||| |||||| | |||| ||||||||||||||| ||||||| |||  ||||||||||| | ||||||||    
T  24641160 aaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaa 24641259  T
Q  108 gtgggtt 114  Q
     ||||||    
T  24641260 atgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 28364043 - 28363957
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    ||||||||||| | |||  | |||| |||| ||| ||| |||||||||||||||||||||||||  |||||| ||||||||||||||    
T  28364043 aaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccac 28363957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 6758392 - 6758497
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||| |||||||||||  | |||| |||||||| || | |||||||| |||| |||||||||| ||| |||  || |||||||||||||| |||| |||    
T  6758392 aaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaa 6758491  T
Q  108 gtgggt 113  Q
    ||||||    
T  6758492 gtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 24617158 - 24617078
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||||| |||||| ||||||||||| ||||| ||||| |||||||||||||| ||  ||||||||||| ||||    
T  24617158 gagagaatcgaaccttagacct-gaggaggagcatacttctagatctcaaaccaataccacgagatcaacccaagtgagttt 24617078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 32613137 - 32613214
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    ||||||| |||| ||||| |||||| ||||||||||| ||||| | |||  ||||||||||||| |||||||||||||    
T  32613137 agagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 6776603 - 6776679
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    ||||||||  ||| |||||| | ||||||||||||||  ||||||| ||| |||||||||||||| |||||||||||    
T  6776603 gagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 15951298 - 15951378
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| |||| |||||||||||||||||||||||| ||| ||| ||| |  ||||||| ||| |||||||| ||||||    
T  15951298 gagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaagcttataccacaaggacaacccaactgggtt 15951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 28841520 - 28841457
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||| | |||||  | ||||||||||||| |||| ||||||||||||||||||||||||    
T  28841520 aaattagccaatctaaattgacaccggagagaatcgaacttgagaccttgaggaggagcacact 28841457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 6691540 - 6691621
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagt 109  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| | || ||  ||  ||| ||||||||| ||||||||||    
T  6691540 ggcaccggagagaatcgaacctgagaccttga-gaggagcacactccaaggtctaaagtcaacaccaccaggccaacccaagt 6691621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 8597717 - 8597774
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggag 65  Q
    ||||||||||||| |||  ||||| ||||||||| |||| ||||||||||||||||||    
T  8597717 aaattagcccacccaaattggcactggagagaattgaacttgagaccttgaggaggag 8597774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 3779415 - 3779339
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||| ||||||||||||| ||||||||||| |||  || ||| |||||||||| ||| ||||| |||||||||    
T  3779415 gaattgaatctgagaccttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacctaagtgggtt 3779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 8639173 - 8639129
Alignment:
Q  47 ctgagaccttgaggaggagcacacttccagatcacaaaccaatac 91  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||    
T  8639173 ctgagaccttgaggaggagcacatttccagatctcaagccaatac 8639129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 34293833 - 34293889
Alignment:
Q  55 ttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||||||||||||| ||| ||  |||||||||||||| ||| ||||||||||||    
T  34293833 ttgaggaggagcacactcccaaattccaaaccaataccactaggtcaacccaagtgg 34293889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 34444881 - 34444809
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaag 108  Q
    |||||| ||||||||||||||| |||||||||||||   || || |||  ||||||||||||| |||||||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 10650028 - 10650071
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacac 70  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  10650028 ggcaccggagagaatcaaacctgagaccttgaagaggagcacac 10650071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 24555790 - 24555739
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||||| |||||||||||||| ||| | ||||| ||||||||||||||    
T  24555790 gaacctgagatcttgaggaggagcatactccgagatctcaaaccaataccac 24555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 1056655 - 1056761
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| |||||||||   |||||| |||||||| |||| | | |||||||||| ||||| ||| |||  || ||  |||||||||| ||| ||||||||    
T  1056655 aaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccactaggtcaacccaa 1056754  T
Q  108 gtgggtt 114  Q
    |||||||    
T  1056755 gtgggtt 1056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 12216823 - 12216761
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccag 97  Q
    ||||||| ||||||||||||| ||| ||||||||| |  ||| || |||||||||||||||||    
T  12216823 agagaatcgaacctgagacctcgagaaggagcacattcgcaggtcccaaaccaataccaccag 12216761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 14199947 - 14200025
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||| ||| ||||||||||||||||||||||||| |||  || ||| || ||||| | || ||||||||| ||||||||    
T  14199947 gaatcgaatctgagaccttgaggaggagcacactcccaagtctcaagcctatacctctagagcaacccaaatgggttta 14200025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 14446273 - 14446215
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||| |||||||||| ||  |||| ||||||||||||||||| ||||| ||||||||    
T  14446273 gagaatcgaacctgagatctaaaggaagagcacacttccagatcccaaacgaataccac 14446215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 34830303 - 34830369
Alignment:
Q  48 tgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||| |||||| ||||| |||||| |||||| |||| |||||||||||| |||||| ||| |||||    
T  34830303 tgagaacttgagcaggagtacactttcagatctcaaatcaataccaccagagcaacctaagggggtt 34830369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 2616557 - 2616476
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||  |||| ||||||||||| ||||||||||||||||   | ||| | |||||||| ||| |||||||| ||||||    
T  2616557 ggagagaaacgaacttgagaccttgaagaggagcacacttccatgactcaagctaataccactaggccaacccaaatgggtt 2616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 12633090 - 12633009
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||| |||| ||||| || || |||||||||||| ||| ||| |||  ||||| |||| || |||||||||||||||    
T  12633090 ggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccgggacaacccaagtgggtt 12633009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 14278102 - 14278186
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||||||||  ||||||||||||| ||||||||| |||| |||| ||  || |||||| ||||||| ||||||| |||||||    
T  14278102 caccagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaata-caccaggccaacccatgtgggtt 14278186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 23910116 - 23910149
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccag 76  Q
    ||||||||||||||||||||||||||||| ||||    
T  23910116 gaacctgagaccttgaggaggagcacactcccag 23910149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 24507528 - 24507605
Alignment:
Q  30 accggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||| |||||  |||||||||||||||||| ||| | || || ||| |||| ||||| ||| ||||||||    
T  24507528 accggagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 24507605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 14695080 - 14695036
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatca 80  Q
    ||||||| ||||||||||||||||||| | ||||||| |||||||    
T  14695080 gagaatgaaacctgagaccttgaggagaaacacactttcagatca 14695036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 17149575 - 17149634
Alignment:
Q  28 gcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaa 88  Q
    ||||| ||| |||| |||||||||||||||| |||||||||||| | ||||| ||||||||    
T  17149575 gcaccagagggaatcgaacctgagaccttga-gaggagcacactccaagatcccaaaccaa 17149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 20213147 - 20213079
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccag 76  Q
    ||||||||||||| |||  | |||  ||| |||| ||||||||||| ||||||||||||||||| ||||    
T  20213147 aaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccag 20213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 22107170 - 22107102
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccag 76  Q
    ||||||||||||| |||  | |||  ||| |||| ||||||||||| ||||||||||||||||| ||||    
T  22107170 aaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccag 22107102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 30109279 - 30109388
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||   ||||||| | |||| |||||||||||||  |||||||||||||| |||| |||||| |||||||||||| | ||||||||    
T  30109279 aaattagcccacctaaattagcaccgggg-gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaa 30109377  T
Q  108 gtgggtttata 118  Q
    |||||||||||    
T  30109378 gtgggtttata 30109388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 29692356 - 29692463
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||| ||||| |||  |||| ||||||||||  |||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||  ||||||||    
T  29692356 aaattagtccacccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaa 29692455  T
Q  108 gtgggttt 115  Q
     |||||||    
T  29692456 atgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 16773913 - 16773807
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  |||| | |||||||| ||||||||||||| ||||||||||||||| |||| || |||  ||||||||||||  |||| |||    
T  16773913 aaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaa 16773814  T
Q  108 gtgggtt 114  Q
    |||||||    
T  16773813 gtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 29075887 - 29075781
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||| |||||  |||||| |||||||| |||| ||||| || ||||||||||||||| ||||||| ||| |||||||||| |||  |||||||    
T  29075887 aaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaa 29075788  T
Q  108 gtgggtt 114  Q
    |||||||    
T  29075787 gtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 43442276 - 43442216
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  43442276 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccac 43442216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 16457897 - 16457810
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||| |||||| |||| |||||||||||||||||||||||| | || || ||| |||||||||||||| ||||| |||||||||    
T  16457897 ggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 21589390 - 21589288
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||||||||||  |||||| ||| |||| ||||||||||| | |||||| |||| ||| |||| || ||| |||||||||||||| ||||||||||||    
T  21589390 tagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgg 21589291  T
Q  112 gtt 114  Q
    |||    
T  21589290 gtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 30883171 - 30883277
Alignment:
Q  11 ttagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    |||||||||| |||  | ||| || |||||| |||| |||||||||||||||||||||||| |||| || ||| |||||||||| ||  |||||||||||    
T  30883171 ttagcccacccaaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtg 30883270  T
Q  111 ggtttat 117  Q
    |||||||    
T  30883271 ggtttat 30883277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 25627142 - 25627057
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| |||||||| ||||||||||||||||||||||||||||| |||  |  ||| |||||||||| ||| |||||||||||||||    
T  25627142 caccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 14285248 - 14285160
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| |||| |  ||| ||||| ||||  || ||||||||||||||||    
T  14285248 ggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 34984893 - 34984805
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||| |||||||| |||||| |||||||||||||||||||||| |||| |  ||| |||||||||| ||  ||||||||||||||||    
T  34984893 ggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 87429 - 87503
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttata 118  Q
    |||||||||||||||||||||||||||| ||||||  |||  ||||||||| ||| ||||| |||||||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtttata 87503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 8278245 - 8278351
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  ||||||||||| |||  ||| ||||| || ||||||||||||||| |||  || ||| ||||||||| |||  ||||||||    
T  8278245 aaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaa 8278344  T
Q  108 gtgggtt 114  Q
    |||||||    
T  8278345 gtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 14495779 - 14495881
Alignment:
Q  12 tagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||||| |||||  |||| ||||||||||  || ||||||||| ||||||||||||||| ||||||| |||  ||||||||||||  |||||||| |||    
T  14495779 tagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgg 14495878  T
Q  112 gtt 114  Q
    |||    
T  14495879 gtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 17028234 - 17028340
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||  | |||  ||| ||||  |||||||||||||||||||||||||||| |||  || ||| ||||||| || ||| ||||||||    
T  17028234 aaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaa 17028333  T
Q  108 gtgggtt 114  Q
    |||||||    
T  17028334 gtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 26078047 - 26078128
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| |||||||||||||||| ||| |||| ||| |||  || |||||||||||||| ||| ||||||||||||||||    
T  26078047 gagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggttt 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 84930 - 84859
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatc 79  Q
    ||||||||||||| | |  |||||||| |||||| |||| |||||||||||||||||||||||| |||||||    
T  84930 aaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatc 84859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 7918458 - 7918545
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||||||| |||||| ||||||||||||||||  |||| |||| |  ||| |||||||||| ||| |||||||||||||||    
T  7918458 ggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 18595990 - 18596075
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtggg 112  Q
    |||||| |||| ||| |||||| |||||||||||||||||||| | |||| |||||| |||||||||| ||  ||| |||||||||    
T  18595990 ggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatccaagtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 22737158 - 22737081
Alignment:
Q  38 gaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||| ||||||||||| ||| |||||||||||||||||  || ||| |||||||||| ||  ||||||||||||||||    
T  22737158 gaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 21549133 - 21549213
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||| ||| |||| |||||| || |||||||||||||| |||| || ||| |||||||||| ||| |||||||||||||||    
T  21549133 gagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 12877799 - 12877696
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||   | ||| |||||||| ||||||||||| |||||||| | |||||| ||| ||| ||||||||| |||| ||  |||| |||    
T  12877799 aaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccactagaccaactcaa 12877700  T
Q  108 gtgg 111  Q
    ||||    
T  12877699 gtgg 12877696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 22020832 - 22020939
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||||||||    ||| ||||||||| ||| ||||||| |  |||||||||||||| ||||||| ||| | |||||||| | | ||||||||    
T  22020832 aaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaacccaa 22020931  T
Q  108 gtgggttt 115  Q
    | ||||||    
T  22020932 gagggttt 22020939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 12883921 - 12883844
Alignment:
Q  33 ggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    ||||||||| |||| ||||||||  |||||||||||||| ||||||| ||| | ||||||| |||| ||| |||||||    
T  12883921 ggagagaattgaacatgagacctcaaggaggagcacactcccagatcccaacctaataccatcaggtcaatccaagtg 12883844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 16436688 - 16436616
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||| ||||||||||||||||||||||| ||||  || ||| |||||||||| ||| ||||||||||| |||||    
T  16436688 gaacatgagaccttgaggaggagcacac-tccaagtcccaagccaataccactaggccaacccaagtgagttta 16436616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 37258357 - 37258422
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||| |||||||| |||||||| |||||||||||||||||||| | ||||| ||| | ||||||||    
T  37258357 caccagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaataccac 37258422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 16172982 - 16173061
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||| ||||||||||||||||| ||||||||||| | || || ||| |||| || |||||| |||||||||||| ||||    
T  16172982 gagaatcgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacactaccaggccaacccaagtggtttta 16173061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 892479 - 892550
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||||||||||||||||| |||||   || || ||| |||||||||| ||| |||||||| ||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 4793094 - 4793141
Alignment:
Q  44 aacctgagaccttgaggaggagcacacttccagatcacaaaccaatac 91  Q
    |||||||||||| ||||||||||||||| |||| || |||||||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccaggtcccaaaccaatac 4793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 29173596 - 29173533
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||||||||||||  | |||| |||| ||| |||||||| |||| |||||||||||||||    
T  29173596 aaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacact 29173533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 6844827 - 6844729
Alignment:
Q  16 ccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||||||  |||||  |||| ||| |||||| |||||| |||||||| |||||| ||| ||  |||  |||||||||| || |||||||||||||||    
T  6844827 ccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 21086799 - 21086717
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||| |||| ||| ||| |||||| |||||||||||||||||| |||||||  ||| |||||||| |||  |||| |||||||    
T  21086799 caccagagataatcgaatctgagatcttgaggaggagcacactgccagatcctaaatcaataccatcagaccaactcaagtgg 21086717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 35360065 - 35360119
Alignment:
Q  17 cacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    ||||||||  |||||||| |||||| ||||||||||||| |||||| ||||||||    
T  35360065 cacctaaattggcaccggtgagaatcgaacctgagacctcgaggagaagcacact 35360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 19949607 - 19949691
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| || ||| |||||||||| || |||||||||||||| || ||||| |||  ||||||||||| | |||||||||| ||||    
T  19949607 caccggtgaaaattgaacctgagagctcgaggaggagcacac-tctagatctcaagtcaataccaccaagtcaacccaagtaggtt 19949691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 25979250 - 25979213
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  25979250 gagagaatcgaacctgagaccttgaggaggagaacact 25979213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 27841010 - 27841059
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagat 78  Q
    |||| |||||||| ||||| |||| || ||||||||||||||||||||||    
T  27841010 caccagagagaatcgaaccggagatctcgaggaggagcacacttccagat 27841059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 36958118 - 36958199
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    |||||||| ||||||||||| | || ||||| |||||| ||| ||| ||| ||||| ||||||   ||||||||||||||||    
T  36958118 gagagaatcgaacctgagacttcgatgaggaacacactcccaaatctcaagccaatcccaccatatcaacccaagtgggttt 36958199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 1410668 - 1410728
Alignment:
Q  47 ctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||| ||||||||||||||| ||| ||| |||  ||||||||||||  ||||||||    
T  1410668 ctgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 3315302 - 3315258
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||| | |||||| |||||||||||||||||||||||| ||||    
T  3315302 ggcacctgggagaatcgaacctgagaccttgaggaggagcgcact 3315258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 14804659 - 14804743
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    ||||| ||||||||| |||||| |||| | ||| |||| ||||||  || ||| |||||||||| ||| ||| ||||||||||||    
T  14804659 ggcactggagagaatcgaacctaagacttagagaaggaacacactcacaaatcccaaaccaataacactaggccaacccaagtgg 14804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 17155901 - 17155844
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||||||  ||||||||||||||||||||||||| ||  ||| || ||||||||||||||    
T  17155901 agagaatcaaacctgagaccttgaggaggagcactct--caggtcccaaaccaataccac 17155844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 31074319 - 31074275
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacact 71  Q
    |||||| |||||||| |||||||||| ||||||||||| ||||||    
T  31074319 ggcaccagagagaatcgaacctgagatcttgaggaggaacacact 31074275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 43241652 - 43241760
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||| ||| |||||  |||| || ||||||| |||||||||||||  |||| | ||||||| | ||||| |||  ||||||||| ||  ||||||||    
T  43241652 aaattagtccagctaaattggcatcgaagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaa 43241751  T
Q  108 gtgggttta 116  Q
    ||| |||||    
T  43241752 gtgagttta 43241760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 13040 - 13118
Alignment:
Q  32 cggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtg 110  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| | ||||| |||||    
T  13040 cggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 11613 - 11534
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaag 108  Q
    |||| |||||||| ||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||| || ||||||    
T  11613 caccagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 2468 - 2546
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||| |  |||||||| ||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 41603 - 41709
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  | || | |||||||| ||||||||||||| ||||||||||| |||  |||||| ||| |||||||||| ||| ||||||||    
T  41603 aaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaa 41702  T
Q  108 gtgggtt 114  Q
    |||||||    
T  41703 gtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 112388 - 112282
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||| |||||||||  ||||||||||||||| |||||| ||||||  | ||||| |||||| ||||||  ||| ||||||| |||||| ||||||||    
T  112388 aaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaa 112289  T
Q  108 gtgggtt 114  Q
    |||||||    
T  112288 gtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 94960 - 95044
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgg 111  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||| |||| |  ||| |||||||||| ||| ||||||||||||    
T  94960 ggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 459989 - 459883
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||| ||||||||||  |||||||||||||||  || || | | || || ||| ||||||||| || ||| |||||||||||||  ||| ||||| ||    
T  459989 aaattaacccacctaaattggcaccggagagaattaaatctaaaatctcgaagagaagcacactttcaaatcccaaaccaataccattaggccaaccaaa 459890  T
Q  108 gtgggtt 114  Q
    |||||||    
T  459889 gtgggtt 459883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 7715 - 7802
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||||| ||||| |||| ||||||||| ||||||||||||||| ||| || ||| |||||||||||||  |||||||||| ||||    
T  7715 ggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 91196 - 91123
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttta 116  Q
    |||||||||||||| ||||| |||||||||||||||   ||||| ||||||| ||| |||||||||||||||||    
T  91196 gaacctgagaccttaaggagaagcacacttccagattcgaaacctataccactaggtcaacccaagtgggttta 91123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 15747 - 15854
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||||| |||  |||||||  ||||||  ||| |||||||||||||||||||| ||| | | ||| ||| |||||||||||||| ||||  ||    
T  15747 aaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggccaacttaa 15846  T
Q  108 gtgggttt 115  Q
    ||||||||    
T  15847 gtgggttt 15854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 32783 - 32846
Alignment:
Q  52 accttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggttt 115  Q
    ||||||||||||||| |||  |||||||   | |||||||||||||| ||||||||||||||||    
T  32783 accttgaggaggagcgcacccccagatcctcagccaataccaccaggccaacccaagtgggttt 32846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 836 - 910
Alignment:
Q  34 gagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaag 108  Q
    |||||||| ||||||||||| | ||||||||||||| | ||||||| ||| |||||||||||||| || ||||||    
T  836 gagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 2907 - 2985
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    |||||| |||| ||||||||| ||||||| |||||||| || || |||||||| ||||||| | |||||||||||||||    
T  2907 gagaatcgaacttgagaccttaaggaggatcacacttcaaggtcccaaaccaaaaccaccaagccaacccaagtgggtt 2985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 81562 - 81616
Alignment:
Q  36 gagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaata 90  Q
    |||||| ||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  81562 gagaatcgaatctgagaccttgaggaggagcacacttccagattccaaaccaata 81616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 19953 - 20027
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaac 103  Q
    |||| |||||||| ||||||||||||||||||||||||| ||| |||| |  ||| |||||||||| ||| ||||    
T  19953 caccagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 2700 - 2740
Alignment:
Q  27 ggcaccggagagaatggaacctgagaccttgaggaggagca 67  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  2700 ggcaccagagagaatcgaacctgagaccttgaggaggagca 2740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 157000 - 157056
Alignment:
Q  51 gaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||| ||||||||||||||| ||||||| ||| ||||||||| |||| ||||||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaa 157056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 42517 - 42596
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtt 114  Q
    ||||||| |||||||||||  |||||||||||| ||| ||||||  |||  ||||||||| ||| |||||||| ||||||    
T  42517 agagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 1837 - 1760
Alignment:
Q  30 accggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    |||||||||||| |||||  |||||||||||||||||| ||| | || || ||| |||| ||||| ||| ||||||||    
T  1837 accggagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 25338 - 25403
Alignment:
Q  29 caccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccac 94  Q
    |||| |||| ||| ||||||||||||||||| ||||||||||| |||  || ||| ||||||||||    
T  25338 caccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccac 25403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 6631 - 6715
Alignment:
Q  35 agagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaagtgggtttatat 119  Q
    ||||||| ||||| ||||| |||||||||| |||||| |||  ||  ||||||||||||| ||  ||||| ||||||||| ||||    
T  6631 agagaatcgaacccgagactttgaggaggaacacactcccaagtcctaaaccaataccactagatcaacctaagtgggttaatat 6715  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 6924 - 6988
Alignment:
Q  43 gaacctgagaccttgaggaggagcacacttccagatcacaaaccaataccaccagggcaacccaa 107  Q
    ||||||||||| ||||||||||||||||| ||   || ||| |||||||||| ||| ||||||||    
T  6924 gaacctgagactttgaggaggagcacactccccagtcccaagccaataccactaggccaacccaa 6988  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 49412 - 49328
Alignment:
Q  8 aaattagcccacctaaaggggcaccggagagaatggaacctgagaccttgaggaggagcacacttccagatcacaaaccaatacc 92  Q
    |||||| ||||| ||||  | ||||||||||||| |||||||| |||| || ||||||||||||  || ||| ||| ||||||||    
T  49412 aaattaacccacttaaattgacaccggagagaatcgaacctgatacctcgaagaggagcacactctcaaatcccaagccaatacc 49328  T

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