View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5548-Insertion-8 (Length: 430)

Name: NF5548-Insertion-8
Description: NF5548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5548-Insertion-8
NF5548-Insertion-8
[»] chr3 (25 HSPs)
chr3 (138-428)||(12391149-12391440)
chr3 (146-430)||(7770068-7770356)
chr3 (156-392)||(20421373-20421612)
chr3 (138-359)||(11828928-11829149)
chr3 (142-253)||(19431440-19431552)
chr3 (150-230)||(4657194-4657274)
chr3 (239-382)||(12695620-12695765)
chr3 (216-313)||(17393974-17394071)
chr3 (243-359)||(11832419-11832536)
chr3 (243-428)||(27052980-27053166)
chr3 (243-402)||(25680221-25680381)
chr3 (243-402)||(25688525-25688685)
chr3 (177-260)||(11403191-11403274)
chr3 (274-359)||(30104396-30104482)
chr3 (323-382)||(15044668-15044728)
chr3 (279-402)||(25660986-25661110)
chr3 (279-402)||(25667391-25667515)
chr3 (279-402)||(25673796-25673920)
chr3 (218-359)||(1276527-1276669)
chr3 (153-380)||(5347877-5348104)
chr3 (156-258)||(11515087-11515188)
chr3 (242-398)||(12252186-12252343)
chr3 (326-382)||(10935127-10935184)
chr3 (102-139)||(52126885-52126922)
chr3 (332-402)||(16218360-16218431)
[»] chr4 (23 HSPs)
chr4 (156-312)||(9652483-9652639)
chr4 (138-359)||(17867508-17867729)
chr4 (156-253)||(12334198-12334294)
chr4 (243-382)||(28801372-28801513)
chr4 (158-253)||(12343635-12343729)
chr4 (156-309)||(19079776-19079928)
chr4 (186-402)||(9567083-9567295)
chr4 (279-359)||(15712028-15712109)
chr4 (218-382)||(21982506-21982672)
chr4 (370-428)||(12334046-12334104)
chr4 (370-428)||(12343483-12343541)
chr4 (102-139)||(14210454-14210491)
chr4 (102-139)||(14211423-14211460)
chr4 (102-139)||(14212374-14212411)
chr4 (102-139)||(14213343-14213380)
chr4 (102-139)||(14214311-14214348)
chr4 (102-139)||(14215280-14215317)
chr4 (102-139)||(14218151-14218188)
chr4 (102-139)||(14219121-14219158)
chr4 (102-139)||(14220090-14220127)
chr4 (102-139)||(14221041-14221078)
chr4 (102-139)||(14222010-14222047)
chr4 (102-139)||(14222979-14223016)
[»] scaffold0035 (1 HSPs)
scaffold0035 (138-382)||(27687-27932)
[»] chr6 (12 HSPs)
chr6 (138-402)||(5484214-5484480)
chr6 (138-312)||(14671964-14672139)
chr6 (141-253)||(15937416-15937532)
chr6 (184-382)||(26519056-26519255)
chr6 (156-254)||(4177207-4177306)
chr6 (156-259)||(15514883-15514988)
chr6 (267-428)||(10975496-10975659)
chr6 (297-359)||(13310554-13310617)
chr6 (243-312)||(18557964-18558033)
chr6 (218-382)||(19980746-19980912)
chr6 (332-382)||(14894456-14894507)
chr6 (247-311)||(19969223-19969287)
[»] scaffold0305 (1 HSPs)
scaffold0305 (144-241)||(10174-10271)
[»] scaffold0347 (2 HSPs)
scaffold0347 (156-312)||(4879-5035)
scaffold0347 (142-308)||(6623-6786)
[»] scaffold0111 (1 HSPs)
scaffold0111 (138-428)||(25005-25300)
[»] chr5 (8 HSPs)
chr5 (142-402)||(20726429-20726691)
chr5 (139-254)||(26260646-26260761)
chr5 (267-382)||(19315849-19315964)
chr5 (242-402)||(31480113-31480275)
chr5 (279-364)||(22446663-22446752)
chr5 (261-359)||(22827073-22827172)
chr5 (102-139)||(4077838-4077875)
chr5 (323-401)||(24516668-24516747)
[»] chr1 (10 HSPs)
chr1 (138-252)||(16246161-16246276)
chr1 (267-398)||(21979186-21979319)
chr1 (267-359)||(21403013-21403105)
chr1 (243-402)||(21981380-21981541)
chr1 (332-402)||(18621323-18621394)
chr1 (332-428)||(20408652-20408750)
chr1 (219-359)||(21423820-21423960)
chr1 (102-140)||(40981629-40981667)
chr1 (156-257)||(21978314-21978414)
chr1 (262-310)||(21218835-21218883)
[»] scaffold0183 (1 HSPs)
scaffold0183 (138-402)||(19829-20096)
[»] chr8 (9 HSPs)
chr8 (182-424)||(23542944-23543189)
chr8 (243-402)||(24625438-24625599)
chr8 (141-312)||(18828966-18829130)
chr8 (268-359)||(20496326-20496418)
chr8 (32-103)||(38681136-38681206)
chr8 (177-260)||(18117926-18118009)
chr8 (247-307)||(23241631-23241691)
chr8 (332-382)||(23151274-23151325)
chr8 (101-139)||(38681137-38681175)
[»] chr2 (13 HSPs)
chr2 (142-254)||(34877669-34877782)
chr2 (218-392)||(18995791-18995966)
chr2 (138-212)||(24384200-24384274)
chr2 (183-252)||(23164092-23164162)
chr2 (183-252)||(23575349-23575419)
chr2 (218-402)||(28774785-28774970)
chr2 (32-103)||(26449092-26449162)
chr2 (247-311)||(19901862-19901926)
chr2 (102-139)||(4768478-4768515)
chr2 (102-139)||(26449093-26449130)
chr2 (247-311)||(20510892-20510956)
chr2 (279-315)||(23164030-23164066)
chr2 (279-315)||(23575287-23575323)
[»] scaffold1518 (1 HSPs)
scaffold1518 (156-245)||(682-771)
[»] chr7 (9 HSPs)
chr7 (156-257)||(15307858-15307959)
chr7 (177-311)||(12192912-12193045)
chr7 (138-210)||(18363818-18363891)
chr7 (330-428)||(18083175-18083274)
chr7 (198-254)||(18363636-18363693)
chr7 (186-312)||(5323-5447)
chr7 (32-98)||(1971096-1971161)
chr7 (332-402)||(3169659-3169729)
chr7 (180-289)||(18150845-18150954)
[»] scaffold0205 (1 HSPs)
scaffold0205 (156-312)||(8500-8655)
[»] scaffold0228 (3 HSPs)
scaffold0228 (242-428)||(6393-6581)
scaffold0228 (242-428)||(13975-14163)
scaffold0228 (242-428)||(23927-24115)
[»] scaffold0964 (1 HSPs)
scaffold0964 (242-398)||(2741-2898)
[»] scaffold0412 (1 HSPs)
scaffold0412 (217-391)||(3767-3943)
[»] scaffold0772 (1 HSPs)
scaffold0772 (156-254)||(2361-2458)
[»] scaffold0634 (2 HSPs)
scaffold0634 (183-252)||(4359-4429)
scaffold0634 (279-315)||(4455-4491)
[»] scaffold0014 (1 HSPs)
scaffold0014 (277-402)||(202304-202430)
[»] scaffold0193 (1 HSPs)
scaffold0193 (267-382)||(19503-19619)
[»] scaffold0116 (1 HSPs)
scaffold0116 (177-260)||(34368-34451)
[»] scaffold0331 (1 HSPs)
scaffold0331 (184-312)||(5336-5463)
[»] scaffold0416 (1 HSPs)
scaffold0416 (330-392)||(6383-6446)
[»] scaffold0184 (1 HSPs)
scaffold0184 (330-392)||(30719-30782)
[»] scaffold0078 (1 HSPs)
scaffold0078 (330-392)||(42062-42125)


Alignment Details
Target: chr3 (Bit Score: 125; Significance: 3e-64; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 138 - 428
Target Start/End: Original strand, 12391149 - 12391440
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatca 237  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||       
T  12391149 atgggctcaaccctcaattctcttaatgggttcaaagttctcattaactaaatcacaaagtttctactcacttacggttaaaaataaggaatagttactg 12391248  T
Q  238 gctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataacta-aagattattttac 336  Q
    |||| | |||||||||||||||| | || ||||||| ||| ||| || |||||| ||||| |||||||||||| ||||  |||| | |||| |||||||     
T  12391249 gctcatgattaattaccacaaccaactagtaacttagtaaaaat-atgattcccacttaatacactaaaaatatttctcgtaaccagaagactattttat 12391347  T
Q  337 ccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||| | ||| || |||||||||||| ||| |||  | ||||||||||||    
T  12391348 ccttgctcatcaaatgaccaaaataccctcgagtacaaaatgactaaaataccatttataagccaaactctactaatttcggataaaatacac 12391440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 146 - 430
Target Start/End: Complemental strand, 7770356 - 7770068
Alignment:
Q  146 aactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatcagctctta 244  Q
    ||||||| |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||||||| | |||||||    
T  7770356 aactctcgattgtcttaaagagcttaaagttctcattaactaattcacaaagtttctactcacttaatagataaaaatgacgaatagttaccggctctta 7770257  T
Q  245 attaattaccac-aacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgc 342  Q
    |||||||||| | |||  | || ||||||  ||| |||| | |||  | || |||||||||||| ||||||  |||| | ||| | |||||||| |||||    
T  7770256 attaattaccccaaacttactagtaacttggtaaaaatatttattgtcactcaaaacactaaaactaattcccataaccaaaatactattttactcttgc 7770157  T
Q  343 tcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacacgc 430  Q
    ||||||||||||||||| ||| |  ||||| ||| |||||| | |||||||||||| |||||| ||||||| |||||||||||||||||    
T  7770156 tcaccaaatgaccaaaataccattaagtcctaaacgactaaaatacccttcataaggcaaactctaccaatcccagataaaatacacgc 7770068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 156 - 392
Target Start/End: Original strand, 20421373 - 20421612
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaata--acgaatagttatcagctcttaattaattac 253  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||| ||||||| | ||||||||  ||||||||||| | |||||||| |||||||    
T  20421373 tgtcttaatgggctcaaagttcttatgaactaattcacaaattttctacccacttacagttaaaaatataacgaatagttaccggctcttaactaattac 20421472  T
Q  254 cacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgctcaccaaatg 352  Q
      ||||||| |||||||||| ||| ||||||  ||||| ||| ||||||||||||||||||| | || | ||| | |||||||||| ||||||| |||||    
T  20421473 tgcaacccactaataacttagtaaaaataatggttcccactttaaacactaaaaataattctcacaaccaaaatactattttacccctgctcactaaatg 20421572  T
Q  353 accaaaaaccctcgagtccaaaatgactaagacacccttc 392  Q
    |||||||  ||||||| ||||||| ||||| | |||||||    
T  20421573 accaaaatacctcgagaccaaaatcactaaaatacccttc 20421612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 11828928 - 11829149
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatc 236  Q
    ||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||||| |    
T  11828928 atgggctcaaccctcaaatgttttaatgggctcaaaattctcattaactaattcaaaaagtttctactcacttaacgga-caaaataacgaatagttacc 11829026  T
Q  237 agctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattatttta 335  Q
    ||||||| |||||||| |  | || | || ||||||| ||| |||| | |||||| |||||||||||||||||||||||  ||| | ||| |  ||||||    
T  11829027 agctcttgattaattatcctacccaactagtaacttagtaa-aatagtgattcccacttaaaacactaaaaataattctcgtaaccaaaatacaatttta 11829125  T
Q  336 cccttgctcaccaaatgaccaaaa 359  Q
     |||| | ||||||||||||||||    
T  11829126 tccttacccaccaaatgaccaaaa 11829149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 19431440 - 19431552
Alignment:
Q  142 gctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggata-aaaataacgaatagttatcagc 239  Q
    ||||||| |||||||||||||||| ||| ||| || ||| ||||||||||||||||||||||||||||| ||||||| |||| || ||||||||| | ||    
T  19431440 gctcaaccctcaattgtcttaatgagcttaaa-ttgtcactaactaattcacaaagtttctactcacttaacggatataaaacaatgaatagttaccggc 19431538  T
Q  240 tcttaattaattac 253  Q
    ||||||||||||||    
T  19431539 tcttaattaattac 19431552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 230
Target Start/End: Original strand, 4657194 - 4657274
Alignment:
Q  150 ctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaata 230  Q
    |||||||||||||||||| | |||||||  | |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  4657194 ctcaattgtcttaatgggattaaagttcgtactaactaattcaccaagtttctactcatttacggataaaaataacgaata 4657274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 382
Target Start/End: Complemental strand, 12695765 - 12695620
Alignment:
Q  239 ctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaa-gattattttacc 337  Q
    ||||||| ||||||||||||| || || ||||||| ||| |||||| |||||| ||||||||||||||||||  |||| |||| ||| ||  | ||||||    
T  12695765 ctcttaaataattaccacaactcactactaacttagtaaaaataatcattcccacttaaaacactaaaaatatctcttgtaaccaaatgacaaatttacc 12695666  T
Q  338 cttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaa 382  Q
    ||||||||| ||||| |||||| ||||  ||||| |||||||||||    
T  12695665 cttgctcactaaatgcccaaaatacccctgagtctaaaatgactaa 12695620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 17393974 - 17394071
Alignment:
Q  216 taaaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataatt 313  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||| ||  |||||| |||  |||||  ||||| |||||||||||||||||||||    
T  17393974 taaaaataataaatagttatcagctcttaactaattaccacaacccactagcaacttagtaaagataatggttcccacttaaaacactaaaaataatt 17394071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 359
Target Start/End: Complemental strand, 11832536 - 11832419
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaagat-tattttacccttg 341  Q
    ||||||||||| ||||| || |  ||||||| ||| |||| | |||||| |||||||||| ||||||||||||  |||| ||| |  |||||||||||||    
T  11832536 taattaattactacaactcactgttaacttagtaaaaatagttattcccacttaaaacacgaaaaataattctcgtaaccaaaaaactattttacccttg 11832437  T
Q  342 ctcaccaaatgaccaaaa 359  Q
    ||||||||||||||||||    
T  11832436 ctcaccaaatgaccaaaa 11832419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 428
Target Start/End: Original strand, 27052980 - 27053166
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaa--gattattttaccctt 340  Q
    |||||||||||| |||| || || ||||||| ||| |||||| |||||| ||||||||||||||||||| | || ||| ||||  || |||||| |||||    
T  27052980 taattaattacc-caactcagtagtaacttagtaaaaataattattcccacttaaaacactaaaaataact-ttctaaataaaatgactattttgccctt 27053077  T
Q  341 gctcaccaaatgaccaaa-aaccctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
    |||||| |||||||||||  ||||  ||||| ||||||||||| | ||||||| |||| |||| |  |||||| | | |||||||||||    
T  27053078 gctcactaaatgaccaaactacccctgagtctaaaatgactaaaatacccttcttaagtcaaaatccaccaattctaaataaaatacac 27053166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 402
Target Start/End: Complemental strand, 25680381 - 25680221
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttgc 342  Q
    |||||||||||| |||| || || ||||||  ||| |||||| |||||| |||||||| || ||||||||| |  |||| ||||| || ||||||||| |    
T  25680381 taattaattaccccaactcactagtaacttcataaaaataattattcccacttaaaacgctcaaaataattatcttaacaaaagactaatttaccctttc 25680282  T
Q  343 tcaccaaatgaccaaaaacc-ctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    ||| ||||||| ||||| ||  | | ||| ||||||||||| | ||||||| |||||||||    
T  25680281 tcatcaaatgatcaaaatccggttgggtctaaaatgactaaaatacccttcttaagccaaa 25680221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 402
Target Start/End: Complemental strand, 25688685 - 25688525
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttgc 342  Q
    |||||||||||| |||| || || ||||||  ||| |||||| |||||| |||||||| || ||||||||| |  |||| ||||| || ||||||||| |    
T  25688685 taattaattaccccaactcactagtaacttcataaaaataattattcccacttaaaacgctcaaaataattatcttaacaaaagactaatttaccctttc 25688586  T
Q  343 tcaccaaatgaccaaaaacc-ctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    ||| ||||||| ||||| ||  | | ||| ||||||||||| | ||||||| |||||||||    
T  25688585 tcatcaaatgatcaaaatccggttgggtctaaaatgactaaaatacccttcttaagccaaa 25688525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 11403191 - 11403274
Alignment:
Q  177 ctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattaccacaacc 260  Q
    ||||||||| |||||| ||||||||||||||||||  | |||||||||| | || | | | |||||||||||||||||||||||    
T  11403191 ctcattaaccaattcaaaaagtttctactcacttaacggtaaaaataacaattattcaccggctcttaattaattaccacaacc 11403274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 359
Target Start/End: Complemental strand, 30104482 - 30104396
Alignment:
Q  274 ctaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgctcaccaaatgaccaaaa 359  Q
    |||| |||||| |||||| ||||||||||||||||||||| |  ||| | ||||| |||||||||||||| ||||||| ||||||||    
T  30104482 ctaaaaataattattcccacttaaaacactaaaaataattttcttaaccaaaagaatattttacccttgcacaccaaaagaccaaaa 30104396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 15044728 - 15044668
Alignment:
Q  323 aaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaa 382  Q
    ||||| ||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||    
T  15044728 aaagactattttacccttgctcaccaaatgaccaaaatacccctgagtctaaaatgactaa 15044668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 402
Target Start/End: Complemental strand, 25661110 - 25660986
Alignment:
Q  279 aataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatg 377  Q
    |||||| |||||| |||||||| || ||||||||| |  |||| ||||| || |||||||||||||| ||||||| ||||| ||  | | ||| ||||||    
T  25661110 aataattattcccacttaaaacgctcaaaataattatcttaacaaaagactaatttacccttgctcatcaaatgatcaaaatacggttgggtctaaaatg 25661011  T
Q  378 actaagacacccttcataagccaaa 402  Q
    ||||| | ||||||| |||||||||    
T  25661010 actaaaatacccttcttaagccaaa 25660986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 402
Target Start/End: Complemental strand, 25667515 - 25667391
Alignment:
Q  279 aataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatg 377  Q
    |||||| |||||| |||||||| || ||||||||| |  |||| ||||| || |||||||||||||| ||||||| ||||| ||  | | ||| ||||||    
T  25667515 aataattattcccacttaaaacgctcaaaataattatcttaacaaaagactaatttacccttgctcatcaaatgatcaaaatacggttgggtctaaaatg 25667416  T
Q  378 actaagacacccttcataagccaaa 402  Q
    ||||| | ||||||| |||||||||    
T  25667415 actaaaatacccttcttaagccaaa 25667391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 402
Target Start/End: Complemental strand, 25673920 - 25673796
Alignment:
Q  279 aataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatg 377  Q
    |||||| |||||| |||||||| || ||||||||| |  |||| ||||| || |||||||||||||| ||||||| ||||| ||  | | ||| ||||||    
T  25673920 aataattattcccacttaaaacgctcaaaataattatcttaacaaaagactaatttacccttgctcatcaaatgatcaaaatacggttgggtctaaaatg 25673821  T
Q  378 actaagacacccttcataagccaaa 402  Q
    ||||| | ||||||| |||||||||    
T  25673820 actaaaatacccttcttaagccaaa 25673796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 359
Target Start/End: Original strand, 1276527 - 1276669
Alignment:
Q  218 aaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattctta 317  Q
    ||||||||||||| |||||  ||||||| | | || |||||| || || ||||||| ||| |||||| ||| || |||||||||||||||||||  ||      
T  1276527 aaaataacgaataattatcgtctcttaaattactagcacaactcactagtaacttagtaaaaataatcatttccgcttaaaacactaaaaataaccctct 1276626  T
Q  318 taactaaa-gattattttacccttgctcaccaaatgaccaaaa 359  Q
    |||| ||| || || |||| |||| |||||||||||| |||||    
T  1276627 taacaaaatgactaatttatccttactcaccaaatgagcaaaa 1276669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 380
Target Start/End: Original strand, 5347877 - 5348104
Alignment:
Q  153 aattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggata-aaaataacgaatagttatcagctcttaattaatt 251  Q
    |||||| |||||||||||||  |||| || ||||||||| ||||||| |||| ||||||    |  |||||||||| || ||| |  |||| ||| ||||    
T  5347877 aattgttttaatgggctcaatattcttatcaactaattcccaaagttactacacacttaaaccttcaaaataacgattaattaccgtctctaaat-aatt 5347975  T
Q  252 accacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaa-gattattttacccttgctcaccaaa 350  Q
    ||| |||| || || ||||||| ||| |||||| ||||| | |||||||||||||||||| |||  |||| | | || || ||| ||||| |||||||||    
T  5347976 acctcaactcactagtaacttagtaaaaataattattccac-ttaaaacactaaaaataactctcttaacaatatgactaatttgccctttctcaccaaa 5348074  T
Q  351 tgaccaaaa-accctcgagtccaaaatgact 380  Q
    ||||||||| ||||| ||||| |||||||||    
T  5348075 tgaccaaaacaccct-gagtctaaaatgact 5348104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 11515188 - 11515087
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacca 255  Q
    |||||||||||||||||    ||||||||| | |||| ||||||||||||||||||  | |||||||||| | || | | | ||||||||||||||||||    
T  11515188 tgtcttaatgggctcaacacactcattaaccatttca-aaagtttctactcacttaacggtaaaaataacaattattcaccggctcttaattaattacca 11515090  T
Q  256 caa 258  Q
    |||    
T  11515089 caa 11515087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 398
Target Start/End: Complemental strand, 12252343 - 12252186
Alignment:
Q  242 ttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttaccctt 340  Q
    ||||||||||| |||||  || || ||||||| ||| |||||| ||| || | ||||||||| |||||||||||  ||| | ||||||||||||||||||    
T  12252343 ttaattaattaacacaattcactagtaacttagtaaaaataattatttccacctaaaacact-aaaataattctcgtaaccaaaagattattttaccctt 12252245  T
Q  341 gctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagc 398  Q
     || |  |||||||||||| ||||  ||||| |||| |||||| | ||||||| |||||    
T  12252244 tcttataaaatgaccaaaatacccctgagtctaaaacgactaaaatacccttcttaagc 12252186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 10935127 - 10935184
Alignment:
Q  326 gattattttacccttgctcaccaaatgacca-aaaaccctcgagtccaaaatgactaa 382  Q
    ||||||||||||||||||| ||||||||||| || ||||| ||||| ||||| |||||    
T  10935127 gattattttacccttgctccccaaatgaccagaatacccttgagtctaaaataactaa 10935184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 52126922 - 52126885
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  52126922 tagggtaagcatgtttgctaggattagatataaaggat 52126885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 16218431 - 16218360
Alignment:
Q  332 tttacccttgctcaccaaatgaccaaaa-accctcgagtccaaa-atgactaagacacccttcataagccaaa 402  Q
    |||||||||||| ||||||||||||||| ||||| ||||| ||| |||||||| | ||||||| |||||||||    
T  16218431 tttacccttgcttaccaaatgaccaaaataccct-gagtctaaacatgactaaaatacccttcttaagccaaa 16218360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 156 - 312
Target Start/End: Original strand, 9652483 - 9652639
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacca 255  Q
    ||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||    
T  9652483 tgtcttaatggacacaaagctctcattaactaactcacaaagtttctactcacttacggttaaaaataatgaatagttaccagctcttaactaattacca 9652582  T
Q  256 caacccattaataacttactaagaataataattcccccttaaaacactaaaaataat 312  Q
    |||| || || ||||||| ||| ||||||  ||||| ||| ||||||||||||||||    
T  9652583 caactcactagtaacttagtaaaaataatggttcccacttgaaacactaaaaataat 9652639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 17867508 - 17867729
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatc 236  Q
    ||||||| ||||||||| ||||||||| |||| |||||   || ||||||||||||||||||||||| ||||| |||||| |||||||||||||||||      
T  17867508 atgggctgaactctcaaatgtcttaataggcttaaagtctgcactaactaattcacaaagtttctacccacttaacggat-aaaataacgaatagttact 17867606  T
Q  237 agctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattatttta 335  Q
     ||||||||||||||||| ||    | || ||||||| |||  ||| | |||||| |||||||||||||||||||||||  ||| | ||||| |||||||    
T  17867607 ggctcttaattaattacctcactttactagtaacttaataa-tatagtgattcccacttaaaacactaaaaataattctcgtaaccaaaagagtatttta 17867705  T
Q  336 cccttgctcaccaaatgaccaaaa 359  Q
     |||| ||||||||||||||||||    
T  17867706 tccttactcaccaaatgaccaaaa 17867729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 12334294 - 12334198
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattac 253  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||||||||| | ||||||||||||||||    
T  12334294 tgtcttaatgggcttaaagttctcattaactaatccataaagtttctactcacttacgg-taaaaatgatgaatagttaccggctcttaattaattac 12334198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 382
Target Start/End: Original strand, 28801372 - 28801513
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttat-aactaaagattattttacccttg 341  Q
    ||||||||||||||||| || || ||||||| ||| |||||| |||||| ||||||| |||||||||||||||  | | | ||||| |||||||||||||    
T  28801372 taattaattaccacaactcactagtaacttagtaaaaataattattcccacttaaaatactaaaaataattctcgtgaccgaaagactattttacccttg 28801471  T
Q  342 ctcaccaaatgaccaaaa-accctcgagtccaaaatgactaa 382  Q
    |||||||||||| |||||  |||| |||||||||||||||||    
T  28801472 ctcaccaaatgatcaaaaggcccttgagtccaaaatgactaa 28801513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 12343729 - 12343635
Alignment:
Q  158 tcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattac 253  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||  |||||||||||| ||||||| ||||||||||| |  |||||||||||||||    
T  12343729 tcttaattggcttaaagttctcattaactaatccacaaagttttcactcacttacgg-taaaaatgacgaatagttaccgtctcttaattaattac 12343635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 19079928 - 19079776
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacca 255  Q
    |||||||||||| ||||| | ||||||||  |||||||||||||||||||||||||| | |||||||| || ||||||| ||||||||| | ||| |||     
T  19079928 tgtcttaatgggttcaaaatactcattaatcaattcacaaagtttctactcacttacagttaaaaatatcggatagttaccagctcttagtcaataacc- 19079830  T
Q  256 caacccattaataacttactaagaataataattcccccttaaaacactaaaaat 309  Q
    | || || || ||||||| ||| ||||||  ||| | ||| |||||||||||||    
T  19079829 ccactcactagtaacttattaaaaataatggttctcacttgaaacactaaaaat 19079776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 402
Target Start/End: Original strand, 9567083 - 9567295
Alignment:
Q  186 taattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataata 285  Q
    ||||||||  |||| |||||||||||    |||||||||||||| |||| |   ||| |||||||||||||||||||  |    |||| ||| ||||||     
T  9567083 taattcaccgagttactactcacttaattgtaaaaataacgaattgttaccgtatct-aattaattaccacaacccacga----cttagtaaaaataatt 9567177  T
Q  286 attcccccttaaaacactaaaaataattcttataactaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaaga 384  Q
    |||| | ||||||||||||||| || ||||  |||| ||||| || |||| |||| |||||||||||||||||| | ||| ||||| |||||||| || |    
T  9567178 attctcacttaaaacactaaaactagttctcttaacaaaagactaatttatccttactcaccaaatgaccaaaatatccttgagtctaaaatgacaaaaa 9567277  T
Q  385 cacccttcataagccaaa 402  Q
     ||||||| |||||||||    
T  9567278 tacccttcttaagccaaa 9567295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 15712028 - 15712109
Alignment:
Q  279 aataataattcccccttaaaacactaaaaataattcttataactaaa--gattattttacccttgctcaccaaatgaccaaaa 359  Q
    |||||| ||| || |||||||||||||||||| | ||| ||| ||||  || |||||||||||||||||||||||||||||||    
T  15712028 aataattatttccacttaaaacactaaaaata-tccttctaaataaaatgactattttacccttgctcaccaaatgaccaaaa 15712109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 382
Target Start/End: Original strand, 21982506 - 21982672
Alignment:
Q  218 aaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattctta 317  Q
    ||||||||||||||||| |  |||| || ||||||||| ||| || || ||||||| ||| |||||| |||||| ||||||  ||||||||||| |||      
T  21982506 aaaataacgaatagttaccgtctctaaagtaattaccataactcactagtaacttagtaaaaataattattcccacttaaagtactaaaaataactctcg 21982605  T
Q  318 taactaaa-ga-ttattttacccttgctcaccaaatgaccaaaaaccctcgagtccaaaatgactaa 382  Q
    |||| ||| ||  || || |||||||||| ||||||| ||||| ||||  ||||  |||||||||||    
T  21982606 taaccaaatgacataattcacccttgctcgccaaatgcccaaatacccatgagtttaaaatgactaa 21982672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 12334104 - 12334046
Alignment:
Q  370 ccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
    ||||||||||||| | ||||||||||||||||||| ||||||| |   |||||||||||    
T  12334104 ccaaaatgactaaaatacccttcataagccaaactctaccaatcctgaataaaatacac 12334046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 12343541 - 12343483
Alignment:
Q  370 ccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
    ||||||||||||| | |||||| |||||||||||| ||||||| ||  |||||||||||    
T  12343541 ccaaaatgactaaaatacccttgataagccaaactctaccaatcccgaataaaatacac 12343483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14210454 - 14210491
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14210454 tagggtaagcatgtttgctaggattagatataaaggat 14210491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14211423 - 14211460
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14211423 tagggtaagcatgtttgctaggattagatataaaggat 14211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14212374 - 14212411
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14212374 tagggtaagcatgtttgctaggattagatataaaggat 14212411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14213343 - 14213380
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14213343 tagggtaagcatgtttgctaggattagatataaaggat 14213380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14214311 - 14214348
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14214311 tagggtaagcatgtttgctaggattagatataaaggat 14214348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14215280 - 14215317
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14215280 tagggtaagcatgtttgctaggattagatataaaggat 14215317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14218151 - 14218188
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14218151 tagggtaagcatgtttgctaggattagatataaaggat 14218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14219121 - 14219158
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14219121 tagggtaagcatgtttgctaggattagatataaaggat 14219158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14220090 - 14220127
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14220090 tagggtaagcatgtttgctaggattagatataaaggat 14220127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14221041 - 14221078
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14221041 tagggtaagcatgtttgctaggattagatataaaggat 14221078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14222010 - 14222047
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14222010 tagggtaagcatgtttgctaggattagatataaaggat 14222047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 14222979 - 14223016
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  14222979 tagggtaagcatgtttgctaggattagatataaaggat 14223016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 138 - 382
Target Start/End: Complemental strand, 27932 - 27687
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatc 236  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| |    
T  27932 atgggctcaactctcaaatgtcttaatgagatcaaagttctcattaactaattcacaacgtttctactcacttaacggat-aaaataacgaatagttacc 27834  T
Q  237 agctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattatttta 335  Q
     ||||||||||||||||| ||    | || ||||||| ||| ||||   |||||| |||||||||||||||||||||||  ||| | ||||| ||  |||    
T  27833 ggctcttaattaattaccccactttactagtaacttagtaa-aatagctattcccacttaaaacactaaaaataattctcgtaaccaaaagactacatta 27735  T
Q  336 cccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaa 382  Q
     |||| |||||||||| ||||||| ||||  ||||| |||||||||||    
T  27734 tcctttctcaccaaataaccaaaatacccctgagtctaaaatgactaa 27687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 138 - 402
Target Start/End: Complemental strand, 5484480 - 5484214
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactta-cggataaaaataacgaatagttatc 236  Q
    |||||||||||||||||||||||||||| ||||||  |||| | ||||||  | || ||||||||||||||||| || ||||||||||||||||||||||    
T  5484480 atgggctcaactctcaattgtcttaatgagctcaatattcttactaactatattaccaagtttctactcacttaccgaataaaaataacgaatagttatc 5484381  T
Q  237 agctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataact-aaagattatttta 335  Q
      |||||| ||||||| | |||| ||||| ||||||| ||| |||||| ||| || |  |||||| |||||||||||||  ||||| ||| | |||||||    
T  5484380 gtctcttatttaattatcccaactcattagtaacttagtaaaaataattattgccac-caaaacattaaaaataattctcgtaactaaaatactatttta 5484282  T
Q  336 cccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    ||||| || |  |||||| ||||| ||||| ||||||||||||||||| | ||||||| |||||||||    
T  5484281 ccctttcttattaaatgaacaaaatacccttgagtccaaaatgactaaaatacccttcttaagccaaa 5484214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 312
Target Start/End: Original strand, 14671964 - 14672139
Alignment:
Q  138 atgggctcaactctcaat-tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatc 236  Q
    ||||||||||| |||||  |||||||||||| ||||| |||||  | ||||||||||| ||||||||||||||||||  | ||||||||| ||||||| |    
T  14671964 atgggctcaaccctcaaaatgtcttaatgggatcaaacttctccatgactaattcacatagtttctactcacttacgtttgaaaataacggatagttacc 14672063  T
Q  237 agctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataat 312  Q
     |||||| | |||||||||||||||| || ||||||| ||| ||||||  ||||| ||||||||||||||| ||||    
T  14672064 ggctcttgactaattaccacaacccactagtaacttagtaaaaataatggttcccacttaaaacactaaaagtaat 14672139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 15937532 - 15937416
Alignment:
Q  141 ggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggat---aaaaataacgaatagttatc 236  Q
    |||||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| | ||||   |||||||| ||||||||| |    
T  15937532 ggctcaaccctcaaatgtcttaatgggctcaaagttcacactaactaattcataaagtttctactcacttaatggataaaaaaaataatgaatagttacc 15937433  T
Q  237 agctcttaattaattac 253  Q
     ||||||||||||||||    
T  15937432 ggctcttaattaattac 15937416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 382
Target Start/End: Complemental strand, 26519255 - 26519056
Alignment:
Q  184 actaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataa 283  Q
    |||||||||||| ||||||| |||||||| | || || ||||||||||||| |  ||||||| |||||  ||||||||| || ||||||| ||| |||||    
T  26519255 actaattcacaacgtttctattcacttacagttataa-taacgaatagttaccgactcttaactaattctcacaacccactagtaacttagtaaaaataa 26519157  T
Q  284 taattcccccttaaaacactaaaaataattcttataactaaa-gattattttacccttgctcaccaaatgaccaaa-aaccctcgagtccaaaatgacta 381  Q
    |  ||| | ||||||||||||||||||||||| |  |  |||  | ||||||||||||||| || |||||||||||  ||||  || |||||||||||||    
T  26519156 tggttctcacttaaaacactaaaaataattctcaccataaaattactattttacccttgcttacaaaatgaccaaattaccccggaatccaaaatgacta 26519057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 4177306 - 4177207
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactta-cggataaaaataacgaatagttatcagctcttaattaattacc 254  Q
    ||||||||||||||||     ||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||| |||||||||||    
T  4177306 tgtcttaatgggctcacctcactcattaaacaattcacaaagtttctactcacttaacggctaaaaataacgaatagttatcggttctaaattaattacc 4177207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 15514988 - 15514883
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacgg--ataaaaataacgaatagttatcagctcttaattaattac 253  Q
    |||||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||  |  | |||||||| ||||||||| |  ||||||| |||||||    
T  15514988 tgtcttaatggggtcaaagtcctcattaactaactcacaaaatttctactcacttaaagttaaaaaaataatgaatagttaccgactcttaactaattac 15514889  T
Q  254 cacaac 259  Q
    ||||||    
T  15514888 cacaac 15514883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 428
Target Start/End: Original strand, 10975496 - 10975659
Alignment:
Q  267 taacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaa-gattattttacccttgctcaccaaatgaccaaaa-accct 364  Q
    ||||||| ||| |||||| |||||| |||||||  ||||||||||||||  |||| ||| ||  ||||||||||| ||||||||||||||||||  || |    
T  10975496 taacttagtaaaaataattattcccacttaaaattctaaaaataattctcttaacgaaaagacaattttacccttactcaccaaatgaccaaaatgccat 10975595  T
Q  365 cgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
     ||||| ||||||||||| | ||||||| ||||| ||| |  || ||| ||| |||||||||||    
T  10975596 tgagtctaaaatgactaaaatacccttcttaagctaaaatccactaatcccaaataaaatacac 10975659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 359
Target Start/End: Original strand, 13310554 - 13310617
Alignment:
Q  297 aaacactaaaaataattcttataactaaa-gattattttacccttgctcaccaaatgaccaaaa 359  Q
    ||||||||||| |||||| |||||| ||| || |||||||||||||||||||||||||||||||    
T  13310554 aaacactaaaattaattcctataaccaaaagactattttacccttgctcaccaaatgaccaaaa 13310617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 18557964 - 18558033
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataat 312  Q
    ||||||||||| ||||| || || ||||||| ||| |||||| |||||| ||||||||||||||||||||    
T  18557964 taattaattactacaactcactagtaacttagtaaaaataattattcccacttaaaacactaaaaataat 18558033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 382
Target Start/End: Original strand, 19980746 - 19980912
Alignment:
Q  218 aaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataata-attcccccttaaaacactaaaaataattctt 316  Q
    ||||||||||||| |||||  |||| ||| ||||||| |||| ||||| ||||||| ||| ||||||  | || | |||||||||| |||||||| |||     
T  19980746 aaaataacgaataattatcgtctctaaat-aattacctcaactcattagtaacttagtaaaaataatttactctcacttaaaacaccaaaaataactctc 19980844  T
Q  317 ---ataactaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaa 382  Q
       ||||  || || ||||||||||||||||||| |||| |||||| |||||||| || |||||||||||    
T  19980845 cacataa--aatgactattttacccttgctcaccgaatggccaaaataccctcgattctaaaatgactaa 19980912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 14894456 - 14894507
Alignment:
Q  332 tttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaa 382  Q
    ||||||||| |||||||||||||||||| ||||| ||||| |||||||||||    
T  14894456 tttaccctttctcaccaaatgaccaaaatacccttgagtctaaaatgactaa 14894507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 19969287 - 19969223
Alignment:
Q  247 taattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataa 311  Q
    |||||||| |||| || || ||||||| ||| |||||| |||||| |||||||||||||| ||||    
T  19969287 taattaccccaactcactagtaacttagtaaaaataattattcccacttaaaacactaaagataa 19969223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 10174 - 10271
Alignment:
Q  144 tcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctc 241  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10174 tcaactctcaattgtgttaatgggctcaaagttctcattaactaatttacaaagtttctactcacttacggataaaaataacgaatagttatcggctc 10271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 156 - 312
Target Start/End: Original strand, 4879 - 5035
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacca 255  Q
    ||||||||||||||||||| || |||| |||||||| |||||||| ||||||||||||| ||||||||||||||||||| | | |||||| |||||||||    
T  4879 tgtcttaatgggctcaaagctcacattcactaattcccaaagtttatactcacttacggttaaaaataacgaatagttaccggttcttaactaattacca 4978  T
Q  256 caacccattaataacttactaagaataataattcccccttaaaacactaaaaataat 312  Q
    || |||| |||||||||| ||| ||||||  ||| | || |||||||||||||||||    
T  4979 caccccactaataacttagtaaaaataatggttctcgctaaaaacactaaaaataat 5035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 308
Target Start/End: Complemental strand, 6786 - 6623
Alignment:
Q  142 gctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctc 241  Q
    ||||||| ||||| |||||||||||| ||||||| |||||||||||||||| |  |||||||||||||||| | ||||||||||||||||||| |  |||    
T  6786 gctcaaccctcaaatgtcttaatgggttcaaagtcctcattaactaattcata--gtttctactcacttacagttaaaaataacgaatagttaacgactc 6689  T
Q  242 ttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaa 308  Q
    ||||||||||| ||||||||| || ||||||| ||| ||| || |||||| ||||||||||||||||    
T  6688 ttaattaattaacacaacccactagtaacttagtaaaaat-atgattcccacttaaaacactaaaaa 6623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 428
Target Start/End: Original strand, 25005 - 25300
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactc-acttacggataaaaa--taacgaatagtta 234  Q
    ||||||||||| |||||||||||||||||||| |||||| ||  |||||||||||| ||||||||||||  || || ||||||||  |||||||||||||    
T  25005 atgggctcaaccctcaattgtcttaatgggcttaaagttttctctaactaattcaccaagtttctactcgcctaaccgataaaaaattaacgaatagtta 25104  T
Q  235 tcagctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattt 333  Q
     |   ||||| ||||||||| |||| || || ||||||| ||| ||||   |||  |    |||||||||||||||||||| | || | |||||| ||||    
T  25105 ccgtatcttatttaattaccccaactcactagtaacttagtaaaaatatatattgtcatccaaaacactaaaaataattctcacaaccaaaagatcattt 25204  T
Q  334 tacccttgctcaccaaatgaccaaa-aaccctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
    |||||||||||| ||||||||||||  ||||| || ||| |||||||||| | ||||| | ||||||||| | ||| ||| || ||||||||||||    
T  25205 tacccttgctcatcaaatgaccaaattacccttgaatcctaaatgactaaaataccctccttaagccaaaatctactaatcccggataaaatacac 25300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 402
Target Start/End: Complemental strand, 20726691 - 20726429
Alignment:
Q  142 gctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatcagct 240  Q
    ||||||| |||||||||||||||||||||||||||  || |||||||||||| |||||||||||||||| |  ||||||||||||||||||||| |  ||    
T  20726691 gctcaaccctcaattgtcttaatgggctcaaagtttacactaactaattcaccaagtttctactcacttaatagataaaaataacgaatagttaccgtct 20726592  T
Q  241 cttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttaccct 339  Q
     ||| ||||||| | |||| |  || ||||||| ||| |||||| ||| || |  ||||||||||||||||| || | || | ||||| || ||||||||    
T  20726591 gttatttaattatcccaactccctagtaacttagtaaaaataattattgccac-caaaacactaaaaataatcctcacaatcaaaagactaatttaccct 20726493  T
Q  340 tgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    |||| || |||||||||||| ||||  ||| | ||||||||||| | ||||||| ||| |||||    
T  20726492 tgctgacaaaatgaccaaaatacccctgagactaaaatgactaaaatacccttcttaaaccaaa 20726429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 26260761 - 26260646
Alignment:
Q  139 tgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatca 237  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||||| |||||  ||||||||||||||||| ||    
T  26260761 tgggctcaaccctcaaatgtcttaatgggcttaaagttctcattaactaattcacaaaaattctactcacttaacgga-caaaataacgaatagttacca 26260663  T
Q  238 gctcttaattaattacc 254  Q
    ||||||||||| |||||    
T  26260662 gctcttaattagttacc 26260646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 382
Target Start/End: Complemental strand, 19315964 - 19315849
Alignment:
Q  267 taacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttgctcaccaaatgaccaaaa-accctc 365  Q
    ||||||| ||| ||||||||||||| ||||||| ||||| ||||| | || |||| ||| | || ||||||||| ||||| |||||||||||| |||||     
T  19315964 taacttagtaaaaataataattcccacttaaaa-actaacaataacttttgtaacaaaatactaatttaccctttctcactaaatgaccaaaataccctt 19315866  T
Q  366 gagtccaaaatgactaa 382  Q
    || ||||||||||||||    
T  19315865 gaatccaaaatgactaa 19315849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 402
Target Start/End: Original strand, 31480113 - 31480275
Alignment:
Q  242 ttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaa--ataattcttataactaaa-gattattttaccc 338  Q
    |||||||||||| ||||| || || ||||||| ||| | ||||  ||||| |||||||| ||||||  |||||||| ||||| ||| || ||||||| ||    
T  31480113 ttaattaattacgacaactcactagtaacttagtaata-taattgttcccacttaaaacgctaaaataataattctcataaccaaaagactattttaacc 31480211  T
Q  339 ttgctcaccaaatgaccaaaaaccctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    ||||||||||||   ||||| ||||  ||||||||||| ||||| | ||| |||| ||||||||    
T  31480212 ttgctcaccaaagacccaaatacccctgagtccaaaataactaaaatacctttcacaagccaaa 31480275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 22446663 - 22446752
Alignment:
Q  279 aataataattcccccttaaaacactaaaaa---taattcttataactaaa-gattattttacccttgctcaccaaatgaccaaaaaccct 364  Q
    |||||| |||||  ||||||||||||||||   |||||||  |||| ||| || |||||||||||||||||||||||||||||| |||||    
T  22446663 aataatcattccaacttaaaacactaaaaaaaataattctcgtaaccaaaagactattttacccttgctcaccaaatgaccaaataccct 22446752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 359
Target Start/End: Complemental strand, 22827172 - 22827073
Alignment:
Q  261 cattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgctcaccaaatgaccaaaa 359  Q
    ||||||||||||| ||  |||||| |||||| |||||||| ||||||| || ||| |||| | ||||  ||| ||||||||| |||||||||||||||||    
T  22827172 cattaataacttagtacaaataatcattcccacttaaaacgctaaaaaaaactctcataaccaaaagcctatattacccttgttcaccaaatgaccaaaa 22827073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 4077875 - 4077838
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  4077875 taggataagcatgtttgctaggattagatataaaggat 4077838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 401
Target Start/End: Original strand, 24516668 - 24516747
Alignment:
Q  323 aaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaa 401  Q
    ||||| ||||||||||||||||| ||||||||||||| ||| | || || |||| |||||| | |||||| |||||||||    
T  24516668 aaagactattttacccttgctcatcaaatgaccaaaatacctttgaatctaaaacgactaaaatacccttaataagccaa 24516747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 16246161 - 16246276
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatc 236  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||| ||||| ||||||||| ||||||||| || ||||||||||||||||||||| |    
T  16246161 atgggctcaactctcaatggtcttaatgggctcaaagttcacactaagtaatttacaaagtttttactcacttaacagataaaaataacgaatagttacc 16246260  T
Q  237 agctcttaattaatta 252  Q
    ||||||||| ||||||    
T  16246261 agctcttaactaatta 16246276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 398
Target Start/End: Original strand, 21979186 - 21979319
Alignment:
Q  267 taacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgctcaccaaatgac-caaaaaccct 364  Q
    ||||||| ||| |||||| |||||| |||||||||||||||||||||||   || | ||||| |||||||||||| |||||||||||||  ||| |||||    
T  21979186 taacttagtaaaaataatcattcccacttaaaacactaaaaataattctcgcaaccaaaagactattttacccttactcaccaaatgactgaaataccct 21979285  T
Q  365 cgagtccaaaatgactaagacacccttcataagc 398  Q
     |||||  |||||||||| | ||||||| |||||    
T  21979286 tgagtctgaaatgactaaaatacccttcttaagc 21979319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 359
Target Start/End: Original strand, 21403013 - 21403105
Alignment:
Q  267 taacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttgctcaccaaatgaccaaaa 359  Q
    ||||||| ||| |||||| | |||| ||||||||||||||||||||| |  |||| ||||  || ||||||||||||||||||||||||||||    
T  21403013 taacttagtaaaaataatcactcccacttaaaacactaaaaataattttcttaacaaaaggctaatttacccttgctcaccaaatgaccaaaa 21403105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 402
Target Start/End: Original strand, 21981380 - 21981541
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttg 341  Q
    |||||| |||||| ||| || || ||||||| ||| |||||| |||||| |||||||||||||||||||||||   || | |||||  |||||||||||     
T  21981380 taattacttaccataactcactagtaacttagtaaaaataatcattcccacttaaaacactaaaaataattctcgcaaccaaaagacaattttaccctta 21981479  T
Q  342 ctcaccaaatga-ccaaaaaccctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    ||||||||||||   ||| ||||| |||||  |||||||||| | ||| ||| |||||||||    
T  21981480 ctcaccaaatgattgaaatacccttgagtctgaaatgactaaaataccattcttaagccaaa 21981541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 18621394 - 18621323
Alignment:
Q  332 tttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||||||||||| | ||||||| |||||||||    
T  18621394 tttacccttgctcaccaaataaccaaaatacccctgagtccaaaatgactaaaatacccttcttaagccaaa 18621323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 428
Target Start/End: Original strand, 20408652 - 20408750
Alignment:
Q  332 tttacccttgctcaccaaatgaccaaaa-accctcgagtc-caaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
    |||||||||||||||||||||||||||| |||  ||||||  ||||||||||| | ||||||| ||||||||| |  |||||||||| |||| ||||||    
T  20408652 tttacccttgctcaccaaatgaccaaaatacctccgagtctgaaaatgactaaaatacccttcttaagccaaaatcgaccaataccaaataatatacac 20408750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 359
Target Start/End: Original strand, 21423820 - 21423960
Alignment:
Q  219 aaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttat 318  Q
    |||||||||||||||| |  |||| ||| ||||||| || | || || ||||||| ||| | |||| | |||| ||| |||||||||||||||||||  |    
T  21423820 aaataacgaatagttaccgtctctaaat-aattacctcatctcactagtaacttagtaaaattaatcactcccacttgaaacactaaaaataattctcgt 21423918  T
Q  319 -aactaaagattattttacccttgctcaccaaatgaccaaaa 359  Q
     | | ||||| |||||||||||| |||||||||||| |||||    
T  21423919 gaccaaaagactattttaccctttctcaccaaatgatcaaaa 21423960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 40981629 - 40981667
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggatg 140  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  40981629 tagggtaagcatgtttgctaggattagatataaaggatg 40981667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 21978314 - 21978414
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacca 255  Q
    |||||||||||||| ||    ||||||||| |||||| || | ||||| |||||||||| |||||  ||| |||||||| | ||||| ||||||||||||    
T  21978314 tgtcttaatgggcttaacacactcattaaccaattcataatggttctattcacttacgggtaaaaccaac-aatagttaccggctctaaattaattacca 21978412  T
Q  256 ca 257  Q
    ||    
T  21978413 ca 21978414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 21218883 - 21218835
Alignment:
Q  262 attaataacttactaagaataataattcccccttaaaacactaaaaata 310  Q
    |||| ||||||| ||| |||||| |||||| ||||||||||||||||||    
T  21218883 attagtaacttagtaaaaataattattcccacttaaaacactaaaaata 21218835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 402
Target Start/End: Original strand, 19829 - 20096
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatca 237  Q
    ||||||||||| ||||||||||||||||| |||||| |||||| |||||||||||| |||| | |||||| |||  ||| | ||||| ||||||||| |     
T  19829 atgggctcaaccctcaattgtcttaatggcctcaaatttctcactaactaattcaccaagtatatactcaattaacgat-acaataatgaatagttaccg 19927  T
Q  238 gctcttaattaattaccacaacccattaataacttactaagaataata---attcccccttaaaacactaaaaataattcttataactaaagattatttt 334  Q
     || ||||||||||||| |||| || || |||||||  || |||||||   |||||| ||||| | |||||||||||||||  |||| ||||| ||||||    
T  19928 tcttttaattaattaccccaactcactagtaacttaaaaaaaataataattattcccacttaaga-actaaaaataattctcttaacaaaagactatttt 20026  T
Q  335 accc-ttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    |||| || |||||||||||| ||||| ||||  ||| | ||||||||||| | ||||||  |||||||||    
T  20027 acccttttctcaccaaatgaacaaaatacccctgagcctaaaatgactaaaataccctttttaagccaaa 20096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 182 - 424
Target Start/End: Original strand, 23542944 - 23543189
Alignment:
Q  182 taactaattcacaaagtttctactcactta-cggataaaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaa 280  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |  |||| | ||||||||| |||| || |||||||||| ||| ||    
T  23542944 taactaattcaccaagtttctactcacttaacggataaaaataacgaatagttaccgtctctaatttaattaccccaactcactaataacttagtaaaaa 23543043  T
Q  281 taataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgctcaccaaatgaccaaa-aaccctcgagtccaaaatga 378  Q
    ||   |||   ||  |||||||||||| ||||| | |||| | ||||| ||||||| ||||||||||||||||||||||  ||| | |||| ||||||||    
T  23543044 tatatattgttccccaaaacactaaaagtaattatcataatcaaaagactattttatccttgctcaccaaatgaccaaattacctttgagttcaaaatga 23543143  T
Q  379 ctaagacacccttcataagccaaactataccaataccagataaaat 424  Q
    |||| | ||| | | ||||||||| | ||| ||| || ||||||||    
T  23543144 ctaaaataccttccttaagccaaaatctactaatcccggataaaat 23543189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 402
Target Start/End: Original strand, 24625438 - 24625599
Alignment:
Q  243 taattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttg 341  Q
    ||||||||||||||||| || || ||||||| ||| |||||| |||||| | ||||||||||||||||||| |  ||| | ||| ||||||||||| |||    
T  24625438 taattaattaccacaactcactagtaacttagtaaaaataatcattcccacgtaaaacactaaaaataattatcgtaaccaaaatattattttacctttg 24625537  T
Q  342 ctcaccaaatgaccaaa--aaccctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    |||||||||||||||||  | |||| ||||| ||||||||||| | ||||||| |||||||||    
T  24625538 ctcaccaaatgaccaaagtatccct-gagtctaaaatgactaaaatacccttcgtaagccaaa 24625599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 312
Target Start/End: Original strand, 18828966 - 18829130
Alignment:
Q  141 ggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagct 240  Q
    |||||||| |||||||||||||||| ||||||||||| || |||||||||||| ||||||||| |||||      ||||||||||||||||||| |   |    
T  18828966 ggctcaaccctcaattgtcttaatgtgctcaaagttcacactaactaattcaccaagtttctattcact------taaaaataacgaatagttaccgttt 18829059  T
Q  241 cttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataat 312  Q
    |||| ||||||||| |||| || || ||||||| ||| | |||| ||| || |  |||||||||||||||||    
T  18829060 cttatttaattaccccaactcactagtaacttagtaaaattaattattgccac-caaaacactaaaaataat 18829130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 20496418 - 20496326
Alignment:
Q  268 aacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgctcaccaaatgaccaaaa 359  Q
    |||||| ||| |||||| || ||| ||||||||||||||||||||||| |||| | ||| ||||||||||||||||||||| |||||||||||    
T  20496418 aacttagtaaaaataattatccccacttaaaacactaaaaataattctcataaccaaaatattattttacccttgctcacctaatgaccaaaa 20496326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 38681206 - 38681136
Alignment:
Q  32 gagccaaaaaattagatttagggtttagcaaatagtggtaagcgtgtttgttaggattggatataaaagata 103  Q
    |||||||||||||||  |||||||||||||||||| ||||||| |||||| ||||||| |||||||| ||||    
T  38681206 gagccaaaaaattaggattagggtttagcaaatag-ggtaagcatgtttgctaggattagatataaaggata 38681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 18118009 - 18117926
Alignment:
Q  177 ctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattaccacaacc 260  Q
    ||||||||| |||||| ||||||||||||||||||  | |||||||||| | || |  || ||||||||| |||||||||||||    
T  18118009 ctcattaacaaattcaaaaagtttctactcacttaacggtaaaaataacaattactcgtcggctcttaatcaattaccacaacc 18117926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 23241691 - 23241631
Alignment:
Q  247 taattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaa 307  Q
    |||||||| |||| || || ||||||| ||| |||||| ||||||||||||||||||||||    
T  23241691 taattaccccaactcactagtaacttagtaaaaataattattcccccttaaaacactaaaa 23241631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 23151325 - 23151274
Alignment:
Q  332 tttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaa 382  Q
    ||||||||||||||| |||||||||||| ||||  |||||||||||||||||    
T  23151325 tttacccttgctcactaaatgaccaaaatacccctgagtccaaaatgactaa 23151274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 38681175 - 38681137
Alignment:
Q  101 ataggataagcatgtttgctaggattggatataaaggat 139  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  38681175 atagggtaagcatgtttgctaggattagatataaaggat 38681137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 34877669 - 34877782
Alignment:
Q  142 gctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcactt-acggataaaaataacgaatagttatcagct 240  Q
    ||||||| |||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||| | || ||||||||||||||||||| | |||    
T  34877669 gctcaaccctcacttgtcttaatgggctcaaagttcacactaattaattcacaaaatttctactcacttaaggggtaaaaataacgaatagttaccggct 34877768  T
Q  241 cttaattaattacc 254  Q
    ||||||||||||||    
T  34877769 cttaattaattacc 34877782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 392
Target Start/End: Original strand, 18995791 - 18995966
Alignment:
Q  218 aaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattctta 317  Q
    ||||||||||||||||| |  |||| |||||||||||||||| || || ||| ||| ||| |||||| |||||  |||||||||||||||| ||||||      
T  18995791 aaaataacgaatagttaccgtctct-aattaattaccacaactcactagtaaattagtaaaaataatcattcctacttaaaacactaaaaacaattctcg 18995889  T
Q  318 taa-ctaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttc 392  Q
    ||| | ||||| ||||||||||||||||||||||||||||||| ||||  ||||  ||||||||||| | |||||||    
T  18995890 taaccaaaagactattttacccttgctcaccaaatgaccaaaatacccctgagtttaaaatgactaaaatacccttc 18995966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 24384200 - 24384274
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttac 212  Q
    ||||||||||| ||||| |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  24384200 atgggctcaaccctcaaatgtcttaatgggcctaaagttctcactaactaattcacaaagtttctactcacttac 24384274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 23164162 - 23164092
Alignment:
Q  183 aactaattcacaaagtttctactcactta-cggataaaaataacgaatagttatcagctcttaattaatta 252  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||| | |||||||||||||    
T  23164162 aactaattcacaaagtttctattcacttaacggatacaaataacggatagttatcggttcttaattaatta 23164092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 23575419 - 23575349
Alignment:
Q  183 aactaattcacaaagtttctactcactta-cggataaaaataacgaatagttatcagctcttaattaatta 252  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||| | |||||||||||||    
T  23575419 aactaattcacaaagtttctattcacttaacggatacaaataacggatagttatcggttcttaattaatta 23575349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 402
Target Start/End: Original strand, 28774785 - 28774970
Alignment:
Q  218 aaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattctta 317  Q
    ||||||||||||| ||| |  |||| |  |||||||| |||| || |  ||||||| ||| |||||  |||||| ||||||| |||| ||||||  ||      
T  28774785 aaaataacgaataattaccgtctctaagataattacctcaactcactggtaacttagtaaaaataacgattcccacttaaaaaactacaaataaccctct 28774884  T
Q  318 taactaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    || | ||||| || ||| |||||||||||||||||||||||| ||||  ||| | ||||||||||| | ||||||| |||||||||    
T  28774885 tagcaaaagactaatttgcccttgctcaccaaatgaccaaaatacccatgagcctaaaatgactaaaatacccttcttaagccaaa 28774970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 26449162 - 26449092
Alignment:
Q  32 gagccaaaaaattagatttagggtttagcaaatagtggtaagcgtgtttgttaggattggatataaaagata 103  Q
    |||||||||||||||| ||||||||| |||| ||| ||||||| |||||| ||||||| |||||||| ||||    
T  26449162 gagccaaaaaattagaattagggtttggcaattag-ggtaagcatgtttgctaggattagatataaaggata 26449092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 19901926 - 19901862
Alignment:
Q  247 taattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataa 311  Q
    |||||||| |||| ||||| ||||||| ||| |||||| |||| | |||||||||||||||||||    
T  19901926 taattaccgcaactcattagtaacttagtaaaaataattattcacacttaaaacactaaaaataa 19901862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 4768515 - 4768478
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  4768515 taggataagcatgtttgctaagattagatataaaggat 4768478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 26449130 - 26449093
Alignment:
Q  102 taggataagcatgtttgctaggattggatataaaggat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  26449130 tagggtaagcatgtttgctaggattagatataaaggat 26449093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 20510892 - 20510956
Alignment:
Q  247 taattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataa 311  Q
    |||||||| |||| || || ||||||  ||| |||||| |||||| |||||||||||||||||||    
T  20510892 taattaccccaactcactagtaacttggtaaaaataattattcccacttaaaacactaaaaataa 20510956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 23164066 - 23164030
Alignment:
Q  279 aataataattcccccttaaaacactaaaaataattct 315  Q
    |||||| |||||| |||||||||||||||||||||||    
T  23164066 aataatgattcccacttaaaacactaaaaataattct 23164030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 23575323 - 23575287
Alignment:
Q  279 aataataattcccccttaaaacactaaaaataattct 315  Q
    |||||| |||||| |||||||||||||||||||||||    
T  23575323 aataatgattcccacttaaaacactaaaaataattct 23575287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1518 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1518
Description:

Target: scaffold1518; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 682 - 771
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaa 245  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||| | ||||||||    
T  682 tgtcttaatgggctcaaagctctcattaactaactcacaaagtttctaatcatttacggttaaaaataacgaatagttaccggctcttaa 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 15307858 - 15307959
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacca 255  Q
    |||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||||| ||||||||||||||||||| |   |||||| |||||||||    
T  15307858 tgtcttaatgggctcaaagtcctcattcagtaattcacaaagtttgtactcacttacggttaaaaataacgaatagttaccgattcttaactaattacca 15307957  T
Q  256 ca 257  Q
    ||    
T  15307958 ca 15307959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 12192912 - 12193045
Alignment:
Q  177 ctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttacta 276  Q
    ||||||||| |||||||||||||||||  | || |||| ||||||||||||||||||| | |||||||| |||||||||||| | |||| ||||||| ||    
T  12192912 ctcattaaccaattcacaaagtttctaacctctcacgg-taaaaataacgaatagttaccggctcttaactaattaccacaatctattagtaacttagta 12193010  T
Q  277 agaataataattcccccttaaaacactaaaaataa 311  Q
    | ||||||  || || ||| |||||||||||||||    
T  12193011 aaaataatggtttccacttgaaacactaaaaataa 12193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 18363891 - 18363818
Alignment:
Q  138 atgggctcaactctcaattgtcttaatgggctcaaagttctcattaactaattcacaaag-tttctactcactt 210  Q
    ||||||||||| |||||||||||||||||||||||||  | || |||||||||||| ||| |||||||||||||    
T  18363891 atgggctcaaccctcaattgtcttaatgggctcaaagcacacaataactaattcaccaagttttctactcactt 18363818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 428
Target Start/End: Original strand, 18083175 - 18083274
Alignment:
Q  330 attttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
    ||||||| ||||||||||||||||||||||  ||||  |||| ||||||||||| | ||||||| ||||||||| | ||| ||| |||  ||||||||||    
T  18083175 attttacacttgctcaccaaatgaccaaaatgcccttaagtctaaaatgactaaaatacccttcttaagccaaaatctactaatcccaagtaaaatacac 18083274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 18363693 - 18363636
Alignment:
Q  198 tttctactcacttac-ggataaaaataacgaatagttatcagctcttaattaattacc 254  Q
    ||||||||||||||  ||||||||||||||||||||||   |||||||||||||||||    
T  18363693 tttctactcacttaaaggataaaaataacgaatagttactggctcttaattaattacc 18363636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 5323 - 5447
Alignment:
Q  186 taattcacaaagtttctactcacttac-ggataaaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaataat 284  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||| ||| | ||||||| |||| ||| |||||||| ||  ||||||   | |||| |    
T  5323 taattcacaacgtt-ctactcacttaatggataaaaataacgaatatttaccggctcttagttaaatactacaacccactagcaactta--gaaaatatt 5419  T
Q  285 aattcccccttaaaacactaaaaataat 312  Q
     |||||| |||||| |||||||||||||    
T  5420 cattcccacttaaatcactaaaaataat 5447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 1971161 - 1971096
Alignment:
Q  32 gagccaaaaaattagatttagggtttagcaaatagtggtaagcgtgtttgttaggattggatataaa 98  Q
    ||||||||||| |||||||||||||| | || ||| ||||||| |||||| ||||||| ||||||||    
T  1971161 gagccaaaaaagtagatttagggtttggaaattag-ggtaagcatgtttgctaggattagatataaa 1971096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 3169729 - 3169659
Alignment:
Q  332 tttacccttgctcaccaaatgaccaaaaaccctcgagtccaaaatgactaagacacccttcataagccaaa 402  Q
    ||||||||| ||||| |||||| |||||  | ||||||| ||||||||||| | ||||||| |||||||||    
T  3169729 tttaccctttctcactaaatgatcaaaatacttcgagtctaaaatgactaaaatacccttcttaagccaaa 3169659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 289
Target Start/End: Complemental strand, 18150954 - 18150845
Alignment:
Q  180 attaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattaccacaacc-cattaataacttactaag 278  Q
    |||||| |||||| ||||||||||||||||||  | |||||||||  | || | | || |||||||| ||||| ||||||| || |||||||||| |||     
T  18150954 attaaccaattcaaaaagtttctactcacttaacggtaaaaataataattactcaccaactcttaatcaattagcacaaccacactaataacttagtaa- 18150856  T
Q  279 aataataattc 289  Q
    |||||||||||    
T  18150855 aataataattc 18150845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 312
Target Start/End: Original strand, 8500 - 8655
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacca 255  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||| || ||||| ||||||||||||| ||  ||| || |||| ||||    
T  8500 tgtcttaatgggttcaaagctctcattaactaactcacaaagtttctacccacttatggttaaaattaacgaatagttaccaaatctaaactaatcacca 8599  T
Q  256 caacccattaataacttactaagaataataattcccccttaaaacactaaaaataat 312  Q
    ||| ||| || ||||||  ||| |||||| |||||  ||  ||||||||||||||||    
T  8600 caa-ccactagtaactttgtaaaaataatgattccaactagaaacactaaaaataat 8655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 428
Target Start/End: Complemental strand, 6581 - 6393
Alignment:
Q  242 ttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttaccctt 340  Q
    |||||||||||||||||| || || ||||||| ||| |||||| |||||| ||||||||| | |||||||||||  ||| | ||||| ||||||||||||    
T  6581 ttaattaattaccacaactcactagtaacttagtaaaaataatcattcccacttaaaacattgaaaataattctcgtaaccaaaagactattttaccctt 6482  T
Q  341 gctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
     ||||  ||||||| |||| ||||| ||||| ||||||| ||| | ||||||| ||| ||||| | ||| ||| ||  |||||||||||    
T  6481 tctcatgaaatgacaaaaatacccttgagtctaaaatgagtaaaatacccttcttaaaccaaaatctactaatcccgaataaaatacac 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 428
Target Start/End: Complemental strand, 14163 - 13975
Alignment:
Q  242 ttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttaccctt 340  Q
    |||||||||||||||||| || || ||||||| ||| |||||| |||||| ||||||||| | |||||||||||  ||| | ||||| ||||||||||||    
T  14163 ttaattaattaccacaactcactagtaacttagtaaaaataatcattcccacttaaaacattgaaaataattctcgtaaccaaaagactattttaccctt 14064  T
Q  341 gctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
     ||||  ||||||| |||| ||||| ||||| ||||||| ||| | ||||||| ||| ||||| | ||| ||| ||  |||||||||||    
T  14063 tctcatgaaatgacaaaaatacccttgagtctaaaatgagtaaaatacccttcttaaaccaaaatctactaatcccgaataaaatacac 13975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 428
Target Start/End: Complemental strand, 24115 - 23927
Alignment:
Q  242 ttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttaccctt 340  Q
    |||||||||||||||||| || || ||||||| ||| |||||| |||||| ||||||||| | |||||||||||  ||| | ||||| ||||||||||||    
T  24115 ttaattaattaccacaactcactagtaacttagtaaaaataatcattcccacttaaaacattgaaaataattctcgtaaccaaaagactattttaccctt 24016  T
Q  341 gctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagccaaactataccaataccagataaaatacac 428  Q
     ||||  ||||||| |||| ||||| ||||| ||||||| ||| | ||||||| ||| ||||| | ||| ||| ||  |||||||||||    
T  24015 tctcatgaaatgacaaaaatacccttgagtctaaaatgagtaaaatacccttcttaaaccaaaatctactaatcccgaataaaatacac 23927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 398
Target Start/End: Original strand, 2741 - 2898
Alignment:
Q  242 ttaattaattaccacaacccattaataacttactaagaataataattcccccttaaaacactaaaaataattcttataactaaagattattttacccttg 341  Q
    ||||||||||||| |||| || |  ||| ||  ||| |||||| ||| || |||| ||||||||||||||||||  |||| ||||| || ||||||||||    
T  2741 ttaattaattaccccaactcacttgtaagttggtaaaaataattattgccacttataacactaaaaataattctcttaacaaaagactaatttacccttg 2840  T
Q  342 ctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttcataagc 398  Q
    |||||||||||||||||| ||||  ||| | ||||||||||| | ||||||| |||||    
T  2841 ctcaccaaatgaccaaaatacccctgagactaaaatgactaaaatacccttcttaagc 2898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 391
Target Start/End: Original strand, 3767 - 3943
Alignment:
Q  217 aaaaataacgaatagttatcagctcttaattaattaccacaacccattaataacttact-aagaataataattcccccttaaaacactaaaaataattct 315  Q
    |||||||||||||||||| |  |||| |||||||||||||||| || || ||||||| | || |||||| ||| || ||||||| ||||||||||||| |    
T  3767 aaaaataacgaatagttaccgtctct-aattaattaccacaactcactagtaacttagtaaaaaataattatttccacttaaaatactaaaaataatttt 3865  T
Q  316 tataa-ctaaagattattttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacaccctt 391  Q
      ||| | ||| | |||||||| |||||||||||||||||||||| | ||| ||||  ||||||||||| | ||||||    
T  3866 cgtaatcaaaatactattttacacttgctcaccaaatgaccaaaatatccttgagtttaaaatgactaaaataccctt 3943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 2458 - 2361
Alignment:
Q  156 tgtcttaatgggctcaaagttctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattacc 254  Q
    |||||||||||||||||    ||||||||| |||||| || ||||||| ||||||||||||||||| |||| ||||||| | ||||| |||||||||||    
T  2458 tgtcttaatgggctcaacacactcattaaccaattcaaaatgtttctattcacttacggataaaaacaacg-atagttaccggctctaaattaattacc 2361  T

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Target: scaffold0634 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 4359 - 4429
Alignment:
Q  183 aactaattcacaaagtttctactcactta-cggataaaaataacgaatagttatcagctcttaattaatta 252  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||| | |||||||||||||    
T  4359 aactaattcacaaagtttctattcacttaacggatacaaataacggatagttatcggttcttaattaatta 4429  T

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Target: scaffold0634; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 4455 - 4491
Alignment:
Q  279 aataataattcccccttaaaacactaaaaataattct 315  Q
    |||||| |||||| |||||||||||||||||||||||    
T  4455 aataatgattcccacttaaaacactaaaaataattct 4491  T

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Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 402
Target Start/End: Complemental strand, 202430 - 202304
Alignment:
Q  277 agaataataattcccccttaaaacactaaaaataattcttataactaaa-gattattttacccttgctcaccaaatgacca-aaaaccctcgagtccaaa 374  Q
    |||||||| |||||| | |||||||||||||||||  ||| | | |||| ||||| |||||||||||||| |||||||||| |||||||  ||| | |||    
T  202430 agaataattattcccacataaaacactaaaaataac-cttctcaataaaagattaatttacccttgctcatcaaatgaccaaaaaacccctgagcctaaa 202332  T
Q  375 atgactaagacacccttcataagccaaa 402  Q
    |||||||| | ||||||| |||||||||    
T  202331 atgactaaaatacccttcttaagccaaa 202304  T

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Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 19503 - 19619
Alignment:
Q  267 taacttactaagaataataattcccccttaaaacactaaaaataattcttataa-ctaaagattattttacccttgctcaccaaatgaccaaaaaccctc 365  Q
    ||||||| ||| |||||| |||||| |||||||||||||||||||||||  ||| | ||||| |||||| ||||| |||||| ||| |||||||  ||||    
T  19503 taacttagtaaaaataattattcccacttaaaacactaaaaataattctcgtaatcaaaagactattttcccctt-ctcacctaataaccaaaatacctc 19601  T
Q  366 -gagtccaaaatgactaa 382  Q
     ||||| |||||||||||    
T  19602 tgagtctaaaatgactaa 19619  T

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Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 34451 - 34368
Alignment:
Q  177 ctcattaactaattcacaaagtttctactcacttacggataaaaataacgaatagttatcagctcttaattaattaccacaacc 260  Q
    ||||||||| |||||| ||||||||||||||||||  | |||||| ||| | || | | | |||||||||||||||||||||||    
T  34451 ctcattaaccaattcaaaaagtttctactcacttaatggtaaaaacaacaattactcaccggctcttaattaattaccacaacc 34368  T

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Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 5463 - 5336
Alignment:
Q  184 actaattcacaaagtttctactcacttacggataaaaataa-cgaatagttatcagctcttaattaattaccacaacccattaataacttactaagaata 282  Q
    |||||||||||| || |||| |||||||| | ||||| | | |||||| ||||| |||| ||| |||||||||||||||| || ||||||| ||| ||||    
T  5463 actaattcacaacgtatctattcacttacagttaaaagttatcgaataattatcggctcataactaattaccacaacccactagtaacttagtaa-aata 5365  T
Q  283 ataattcccccttaaaacactaaaaataat 312  Q
    ||  ||||| ||| ||||| ||||||||||    
T  5364 atggttcccactt-aaacagtaaaaataat 5336  T

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Target: scaffold0416 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 6383 - 6446
Alignment:
Q  330 attttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttc 392  Q
    ||||||||| | |||||||||||||||||| |||||  |||||||||||||||| | |||||||    
T  6383 attttacccgtcctcaccaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttc 6446  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 30782 - 30719
Alignment:
Q  330 attttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttc 392  Q
    ||||||||| | |||||||||||||||||| |||||  |||||||||||||||| | |||||||    
T  30782 attttacccgtcctcaccaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttc 30719  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 42062 - 42125
Alignment:
Q  330 attttacccttgctcaccaaatgaccaaaa-accctcgagtccaaaatgactaagacacccttc 392  Q
    ||||||||| | |||||||||||||||||| |||||  |||||||||||||||| | |||||||    
T  42062 attttacccgtcctcaccaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttc 42125  T

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