View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5549_low_24 (Length: 209)
Name: NF5549_low_24
Description: NF5549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5549_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 14699131 - 14698995
Alignment:
| Q |
20 |
atacttgctagattaattcattatgacttttaaaaattacacaagtaaatattactcaagaatgacgagctagaaactcaatttcgaatctagacccttg |
119 |
Q |
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| T |
14699131 |
atacttgctagattaattcattatgacttttaaaaattacacaagtaaatattactcaagaatgacgagctagaaactcaatttcgaatctagacccttg |
14699032 |
T |
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| Q |
120 |
gtatcttaaatttaaagctgaatgaaatcacttgttc |
156 |
Q |
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| T |
14699031 |
gtatcttaaatttaaagctgaatgaaatcacttgttc |
14698995 |
T |
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