View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5554-Insertion-2 (Length: 830)

Name: NF5554-Insertion-2
Description: NF5554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5554-Insertion-2
NF5554-Insertion-2
[»] chr1 (68 HSPs)
chr1 (8-830)||(47455224-47456046)
chr1 (112-478)||(47460677-47461043)
chr1 (499-699)||(47451194-47451394)
chr1 (499-701)||(19798980-19799182)
chr1 (499-701)||(23192785-23192986)
chr1 (499-701)||(51041430-51041630)
chr1 (499-701)||(39588334-39588536)
chr1 (499-701)||(33301147-33301349)
chr1 (499-701)||(40165906-40166108)
chr1 (499-701)||(16649580-16649781)
chr1 (499-701)||(26927689-26927891)
chr1 (499-701)||(10135382-10135584)
chr1 (125-479)||(47467342-47467696)
chr1 (499-701)||(16035528-16035736)
chr1 (504-646)||(3094045-3094187)
chr1 (499-631)||(25855097-25855229)
chr1 (504-703)||(38620624-38620822)
chr1 (499-701)||(10140015-10140217)
chr1 (699-827)||(10136999-10137127)
chr1 (501-670)||(18784547-18784716)
chr1 (699-827)||(25845430-25845558)
chr1 (556-702)||(12259979-12260125)
chr1 (499-610)||(16832027-16832138)
chr1 (499-582)||(25843738-25843821)
chr1 (548-670)||(8900229-8900351)
chr1 (555-701)||(11806341-11806487)
chr1 (563-669)||(2493817-2493923)
chr1 (569-669)||(10106100-10106199)
chr1 (584-668)||(12906166-12906248)
chr1 (569-668)||(38734272-38734370)
chr1 (603-701)||(8137969-8138067)
chr1 (699-815)||(11810583-11810696)
chr1 (563-668)||(27761839-27761944)
chr1 (562-683)||(5346652-5346773)
chr1 (584-685)||(33380905-33381004)
chr1 (615-703)||(16833526-16833614)
chr1 (569-668)||(13890810-13890908)
chr1 (569-668)||(39747165-39747263)
chr1 (639-701)||(25843822-25843884)
chr1 (572-668)||(5724979-5725074)
chr1 (572-668)||(36684715-36684810)
chr1 (563-685)||(24159783-24159904)
chr1 (569-668)||(26651166-26651264)
chr1 (563-668)||(36724698-36724803)
chr1 (572-668)||(3584601-3584696)
chr1 (572-668)||(11251113-11251208)
chr1 (572-668)||(34318224-34318319)
chr1 (572-668)||(37404416-37404511)
chr1 (569-668)||(5602425-5602523)
chr1 (563-665)||(4632929-4633031)
chr1 (584-669)||(23193222-23193306)
chr1 (572-668)||(5730105-5730200)
chr1 (608-696)||(25779288-25779376)
chr1 (572-668)||(37409537-37409632)
chr1 (569-668)||(14582096-14582194)
chr1 (569-607)||(8267891-8267929)
chr1 (563-608)||(19422937-19422982)
chr1 (572-613)||(27716443-27716484)
chr1 (561-698)||(28434544-28434680)
chr1 (499-548)||(46696596-46696645)
chr1 (584-668)||(31063968-31064050)
chr1 (604-666)||(28858065-28858126)
chr1 (699-765)||(37408525-37408591)
chr1 (572-613)||(11387884-11387925)
chr1 (499-548)||(12259911-12259959)
chr1 (591-632)||(25661858-25661899)
chr1 (584-681)||(32987252-32987347)
chr1 (569-602)||(41098017-41098050)
[»] scaffold0182 (1 HSPs)
scaffold0182 (499-701)||(9854-10056)
[»] chr5 (63 HSPs)
chr5 (499-701)||(29167940-29168142)
chr5 (499-701)||(556621-556823)
chr5 (499-701)||(561393-561595)
chr5 (499-699)||(41996591-41996791)
chr5 (499-699)||(42001360-42001560)
chr5 (499-701)||(12102950-12103153)
chr5 (499-701)||(26667198-26667400)
chr5 (499-701)||(26938795-26938997)
chr5 (504-701)||(36428640-36428837)
chr5 (499-701)||(12501866-12502069)
chr5 (522-701)||(36942232-36942411)
chr5 (499-701)||(39522974-39523177)
chr5 (499-701)||(6155386-6155588)
chr5 (499-701)||(39518336-39518538)
chr5 (499-701)||(12045106-12045309)
chr5 (522-701)||(36937478-36937657)
chr5 (496-685)||(37248778-37248967)
chr5 (501-701)||(36423565-36423765)
chr5 (499-698)||(7451684-7451883)
chr5 (499-701)||(41587127-41587329)
chr5 (498-701)||(3665856-3666060)
chr5 (499-696)||(10759792-10759992)
chr5 (499-703)||(6514566-6514769)
chr5 (499-671)||(37652827-37652999)
chr5 (506-698)||(40147828-40148020)
chr5 (504-701)||(11981247-11981443)
chr5 (499-701)||(20181030-20181233)
chr5 (499-701)||(12041899-12042101)
chr5 (499-685)||(35679858-35680047)
chr5 (699-827)||(26668951-26669079)
chr5 (699-827)||(26940548-26940676)
chr5 (503-701)||(32461516-32461702)
chr5 (699-827)||(558443-558571)
chr5 (699-827)||(39520059-39520187)
chr5 (699-827)||(41998389-41998517)
chr5 (699-827)||(36940483-36940611)
chr5 (711-830)||(36425326-36425445)
chr5 (553-698)||(12102801-12102946)
chr5 (555-701)||(16116216-16116362)
chr5 (556-664)||(15414885-15414993)
chr5 (499-581)||(37550089-37550170)
chr5 (638-699)||(4871987-4872048)
chr5 (572-668)||(13582690-13582785)
chr5 (572-668)||(24435869-24435964)
chr5 (569-668)||(7805068-7805166)
chr5 (569-668)||(14374132-14374230)
chr5 (572-668)||(36253826-36253921)
chr5 (548-701)||(9911128-9911280)
chr5 (618-671)||(37550029-37550082)
chr5 (572-668)||(17510058-17510153)
chr5 (568-701)||(13301454-13301585)
chr5 (584-685)||(18265489-18265588)
chr5 (572-669)||(24771356-24771452)
chr5 (501-545)||(12104205-12104249)
chr5 (572-668)||(42019573-42019668)
chr5 (563-669)||(1414050-1414155)
chr5 (572-613)||(26709102-26709143)
chr5 (572-613)||(26978836-26978877)
chr5 (572-668)||(17504953-17505048)
chr5 (572-608)||(41853548-41853584)
chr5 (563-613)||(24776869-24776919)
chr5 (503-548)||(9496714-9496759)
chr5 (569-602)||(31731540-31731573)
[»] scaffold0002 (2 HSPs)
scaffold0002 (497-701)||(3998-4202)
scaffold0002 (499-696)||(443917-444101)
[»] chr3 (75 HSPs)
chr3 (494-701)||(3672505-3672712)
chr3 (499-701)||(3692542-3692744)
chr3 (497-701)||(39775695-39775899)
chr3 (499-701)||(7571185-7571387)
chr3 (499-701)||(18467149-18467351)
chr3 (499-701)||(23666090-23666292)
chr3 (499-701)||(24038338-24038540)
chr3 (499-701)||(8069603-8069805)
chr3 (499-701)||(8883094-8883296)
chr3 (504-701)||(758335-758532)
chr3 (504-701)||(3033573-3033770)
chr3 (499-703)||(18471932-18472135)
chr3 (499-701)||(14438662-14438864)
chr3 (499-702)||(3418918-3419122)
chr3 (499-698)||(8887854-8888053)
chr3 (498-685)||(29350163-29350350)
chr3 (501-701)||(12965840-12966040)
chr3 (522-701)||(32474647-32474824)
chr3 (502-701)||(55431242-55431441)
chr3 (499-699)||(20519978-20520178)
chr3 (495-698)||(49971394-49971597)
chr3 (555-703)||(12971598-12971746)
chr3 (499-701)||(3657207-3657409)
chr3 (501-701)||(29715570-29715770)
chr3 (499-701)||(23661431-23661619)
chr3 (699-827)||(8884917-8885045)
chr3 (499-681)||(12112628-12112822)
chr3 (498-625)||(27708802-27708928)
chr3 (699-827)||(18468886-18469014)
chr3 (699-827)||(23664415-23664543)
chr3 (699-827)||(3674313-3674442)
chr3 (598-701)||(27708959-27709062)
chr3 (555-699)||(28125097-28125242)
chr3 (499-613)||(2207762-2207876)
chr3 (699-814)||(12970116-12970231)
chr3 (563-668)||(26962050-26962154)
chr3 (569-668)||(13022024-13022122)
chr3 (556-701)||(20507637-20507779)
chr3 (564-631)||(25726830-25726897)
chr3 (569-668)||(33089343-33089441)
chr3 (563-685)||(48432398-48432519)
chr3 (572-668)||(20090662-20090757)
chr3 (572-668)||(20095787-20095882)
chr3 (572-668)||(34129169-34129264)
chr3 (569-668)||(20810369-20810467)
chr3 (569-668)||(53119524-53119622)
chr3 (563-668)||(48435828-48435933)
chr3 (563-668)||(15768191-15768295)
chr3 (572-668)||(17364063-17364160)
chr3 (572-668)||(3476946-3477041)
chr3 (584-668)||(4662196-4662279)
chr3 (572-668)||(15763030-15763125)
chr3 (590-681)||(16013724-16013816)
chr3 (572-668)||(17368719-17368814)
chr3 (569-668)||(2617256-2617355)
chr3 (569-668)||(38436991-38437089)
chr3 (499-548)||(16013644-16013693)
chr3 (584-685)||(16983006-16983105)
chr3 (572-668)||(17357836-17357933)
chr3 (563-668)||(27605135-27605240)
chr3 (572-668)||(3482423-3482518)
chr3 (639-703)||(6596322-6596386)
chr3 (557-701)||(19276887-19277031)
chr3 (572-668)||(54270644-54270739)
chr3 (646-696)||(55325847-55325897)
chr3 (571-668)||(21494302-21494399)
chr3 (572-668)||(55128790-55128885)
chr3 (574-613)||(10321444-10321483)
chr3 (560-670)||(17026103-17026213)
chr3 (591-669)||(46964031-46964109)
chr3 (569-607)||(53358239-53358277)
chr3 (624-669)||(1741108-1741153)
chr3 (563-668)||(4117600-4117704)
chr3 (569-602)||(10586248-10586281)
chr3 (572-613)||(30341898-30341939)
[»] chr2 (53 HSPs)
chr2 (499-701)||(30650855-30651057)
chr2 (499-701)||(9189770-9189972)
chr2 (499-701)||(19892433-19892635)
chr2 (499-701)||(9180691-9180893)
chr2 (499-701)||(18344357-18344559)
chr2 (498-701)||(1934960-1935163)
chr2 (499-701)||(7737818-7738020)
chr2 (499-701)||(31326665-31326867)
chr2 (499-701)||(35601848-35602050)
chr2 (499-701)||(35638964-35639166)
chr2 (499-696)||(10160696-10160893)
chr2 (499-701)||(30658189-30658391)
chr2 (499-701)||(42926726-42926929)
chr2 (499-696)||(25478269-25478470)
chr2 (499-686)||(30631505-30631692)
chr2 (499-701)||(12796851-12797053)
chr2 (499-696)||(25497297-25497498)
chr2 (505-701)||(28603230-28603431)
chr2 (499-701)||(29677308-29677509)
chr2 (499-701)||(29677694-29677895)
chr2 (699-827)||(25483063-25483191)
chr2 (699-827)||(25490669-25490797)
chr2 (699-827)||(17973644-17973772)
chr2 (699-827)||(30652588-30652716)
chr2 (699-827)||(9183711-9183839)
chr2 (553-701)||(19094461-19094610)
chr2 (499-681)||(19578401-19578595)
chr2 (553-698)||(40847565-40847710)
chr2 (558-699)||(21523689-21523829)
chr2 (699-814)||(30647872-30647988)
chr2 (499-586)||(15489796-15489883)
chr2 (548-696)||(17545270-17545419)
chr2 (499-644)||(20711358-20711516)
chr2 (569-668)||(42914639-42914737)
chr2 (714-814)||(24536327-24536424)
chr2 (563-668)||(160031-160136)
chr2 (571-668)||(5089277-5089373)
chr2 (572-668)||(42723451-42723546)
chr2 (572-668)||(42728620-42728715)
chr2 (572-668)||(44096302-44096397)
chr2 (572-668)||(44754596-44754691)
chr2 (572-668)||(44759762-44759857)
chr2 (563-685)||(14104580-14104701)
chr2 (563-668)||(44957437-44957542)
chr2 (572-668)||(40518472-40518567)
chr2 (699-765)||(32080735-32080801)
chr2 (699-743)||(3175224-3175268)
chr2 (571-607)||(39542900-39542936)
chr2 (499-543)||(40847735-40847779)
chr2 (554-681)||(7734581-7734707)
chr2 (569-607)||(19538382-19538420)
chr2 (569-602)||(6297951-6297984)
chr2 (572-613)||(28751783-28751824)
[»] scaffold0352 (1 HSPs)
scaffold0352 (498-701)||(7029-7232)
[»] chr4 (90 HSPs)
chr4 (499-701)||(31273447-31273649)
chr4 (499-701)||(5271386-5271586)
chr4 (499-701)||(37259844-37260046)
chr4 (499-701)||(37264531-37264733)
chr4 (497-701)||(8693635-8693839)
chr4 (501-701)||(31268962-31269162)
chr4 (499-701)||(16420956-16421157)
chr4 (499-701)||(5928186-5928388)
chr4 (499-701)||(55251647-55251847)
chr4 (499-701)||(8030443-8030645)
chr4 (533-703)||(33463321-33463491)
chr4 (499-670)||(13521990-13522162)
chr4 (504-701)||(33468940-33469137)
chr4 (497-701)||(19101901-19102105)
chr4 (499-670)||(12823893-12824064)
chr4 (499-701)||(32082058-32082259)
chr4 (522-689)||(31765831-31766002)
chr4 (501-696)||(51697841-51698040)
chr4 (517-703)||(13059354-13059540)
chr4 (511-701)||(47244186-47244376)
chr4 (555-701)||(42758722-42758868)
chr4 (499-669)||(19106545-19106715)
chr4 (516-700)||(47574567-47574752)
chr4 (699-827)||(37262857-37262985)
chr4 (699-824)||(33467358-33467483)
chr4 (532-700)||(19906210-19906377)
chr4 (701-830)||(13061140-13061268)
chr4 (699-830)||(12876011-12876141)
chr4 (499-701)||(48276616-48276807)
chr4 (499-602)||(32221163-32221266)
chr4 (499-701)||(31729354-31729540)
chr4 (560-703)||(19541126-19541269)
chr4 (505-643)||(51696931-51697072)
chr4 (556-685)||(12878222-12878351)
chr4 (548-658)||(13065778-13065888)
chr4 (699-814)||(7899184-7899300)
chr4 (555-670)||(2819826-2819941)
chr4 (703-814)||(19103653-19103764)
chr4 (555-701)||(4550980-4551125)
chr4 (556-698)||(12874522-12874664)
chr4 (555-679)||(1151286-1151411)
chr4 (547-701)||(32545068-32545223)
chr4 (572-668)||(653043-653138)
chr4 (563-666)||(10120811-10120913)
chr4 (699-764)||(12316282-12316347)
chr4 (699-814)||(8028637-8028753)
chr4 (595-671)||(16953107-16953183)
chr4 (562-698)||(16947994-16948126)
chr4 (500-558)||(55810257-55810315)
chr4 (584-669)||(16595933-16596017)
chr4 (584-669)||(20513118-20513202)
chr4 (572-668)||(36354176-36354271)
chr4 (572-668)||(36359294-36359389)
chr4 (572-668)||(39999069-39999164)
chr4 (572-668)||(40004027-40004122)
chr4 (572-668)||(53797629-53797724)
chr4 (572-668)||(54343203-54343298)
chr4 (572-668)||(54348357-54348452)
chr4 (563-685)||(33722904-33723025)
chr4 (584-681)||(15020454-15020549)
chr4 (565-634)||(52691089-52691158)
chr4 (557-633)||(6070571-6070647)
chr4 (572-668)||(8980285-8980380)
chr4 (572-668)||(8985405-8985500)
chr4 (572-668)||(13700510-13700605)
chr4 (572-668)||(21299833-21299928)
chr4 (572-668)||(41393245-41393340)
chr4 (572-668)||(51019373-51019468)
chr4 (572-668)||(54991486-54991581)
chr4 (569-668)||(24490028-24490127)
chr4 (571-681)||(40408196-40408307)
chr4 (572-668)||(13695159-13695254)
chr4 (572-668)||(21304953-21305048)
chr4 (572-668)||(47046307-47046402)
chr4 (505-548)||(23093112-23093155)
chr4 (574-668)||(8083027-8083121)
chr4 (699-765)||(17681451-17681517)
chr4 (499-547)||(8652129-8652178)
chr4 (499-547)||(8663936-8663985)
chr4 (572-668)||(13710669-13710763)
chr4 (655-698)||(8649600-8649643)
chr4 (655-698)||(8661407-8661450)
chr4 (569-608)||(10318839-10318878)
chr4 (699-765)||(13687776-13687842)
chr4 (578-632)||(30564450-30564504)
chr4 (555-682)||(39217367-39217490)
chr4 (569-607)||(39319628-39319666)
chr4 (499-548)||(12878153-12878202)
chr4 (569-602)||(34560494-34560527)
chr4 (551-608)||(34644536-34644593)
[»] chr8 (69 HSPs)
chr8 (496-696)||(33416470-33416670)
chr8 (499-701)||(31449833-31450035)
chr8 (499-701)||(17025861-17026063)
chr8 (499-701)||(17556353-17556555)
chr8 (499-701)||(18876334-18876535)
chr8 (496-696)||(44925895-44926095)
chr8 (499-701)||(34118392-34118594)
chr8 (499-701)||(38182204-38182405)
chr8 (499-701)||(1910936-1911138)
chr8 (499-701)||(1807398-1807601)
chr8 (554-701)||(40125852-40125999)
chr8 (499-632)||(40130722-40130855)
chr8 (501-701)||(28559621-28559821)
chr8 (504-646)||(4238337-4238479)
chr8 (547-701)||(19166608-19166762)
chr8 (504-646)||(4243076-4243218)
chr8 (555-701)||(15875635-15875781)
chr8 (553-701)||(17953839-17953988)
chr8 (699-827)||(4241299-4241427)
chr8 (545-701)||(36683551-36683707)
chr8 (699-827)||(17021934-17022062)
chr8 (548-696)||(24090602-24090750)
chr8 (699-827)||(17552371-17552499)
chr8 (499-701)||(2965545-2965758)
chr8 (548-703)||(23548597-23548752)
chr8 (499-674)||(43302712-43302880)
chr8 (699-814)||(21960132-21960248)
chr8 (699-814)||(8329608-8329724)
chr8 (541-678)||(2355449-2355586)
chr8 (499-581)||(19915073-19915155)
chr8 (571-698)||(7902561-7902688)
chr8 (562-701)||(28564786-28564927)
chr8 (562-701)||(28572409-28572550)
chr8 (571-668)||(33616727-33616823)
chr8 (699-830)||(28861286-28861415)
chr8 (569-668)||(19430011-19430109)
chr8 (569-668)||(19435513-19435611)
chr8 (569-668)||(19566160-19566258)
chr8 (569-668)||(19571662-19571760)
chr8 (569-668)||(31030525-31030623)
chr8 (553-668)||(29220246-29220359)
chr8 (572-668)||(32015700-32015795)
chr8 (570-704)||(17793450-17793584)
chr8 (584-669)||(2469986-2470070)
chr8 (563-685)||(4544235-4544356)
chr8 (563-649)||(19954262-19954348)
chr8 (615-701)||(10933474-10933559)
chr8 (563-668)||(13584341-13584453)
chr8 (563-668)||(19949808-19949913)
chr8 (555-677)||(24673316-24673438)
chr8 (604-701)||(12820370-12820467)
chr8 (572-668)||(17955789-17955884)
chr8 (638-701)||(15951523-15951585)
chr8 (584-678)||(20072109-20072200)
chr8 (552-633)||(5883978-5884058)
chr8 (576-668)||(21644081-21644172)
chr8 (569-669)||(42157871-42157970)
chr8 (572-668)||(42514374-42514469)
chr8 (645-701)||(43302658-43302714)
chr8 (594-685)||(34517263-34517351)
chr8 (571-605)||(15951584-15951618)
chr8 (572-666)||(24884712-24884805)
chr8 (601-702)||(27415539-27415640)
chr8 (563-668)||(43999230-43999334)
chr8 (507-569)||(28565268-28565330)
chr8 (507-569)||(28572891-28572953)
chr8 (564-602)||(34818764-34818802)
chr8 (564-602)||(37771703-37771741)
chr8 (572-613)||(32010538-32010579)
[»] chr7 (58 HSPs)
chr7 (504-701)||(4930164-4930361)
chr7 (499-701)||(8268219-8268421)
chr7 (510-698)||(26341136-26341324)
chr7 (499-699)||(8075975-8076176)
chr7 (501-701)||(13314203-13314403)
chr7 (499-670)||(9650965-9651137)
chr7 (499-701)||(44423104-44423307)
chr7 (555-701)||(4579490-4579636)
chr7 (522-701)||(44510644-44510823)
chr7 (553-699)||(23246902-23247048)
chr7 (699-830)||(12802955-12803086)
chr7 (570-701)||(23866065-23866196)
chr7 (496-701)||(27238164-27238370)
chr7 (502-651)||(42627214-42627364)
chr7 (499-701)||(10388334-10388546)
chr7 (555-701)||(25543329-25543475)
chr7 (499-631)||(30256780-30256912)
chr7 (548-666)||(3357634-3357752)
chr7 (555-696)||(12254061-12254202)
chr7 (499-701)||(21671109-21671323)
chr7 (557-701)||(9008147-9008291)
chr7 (499-701)||(3879922-3880123)
chr7 (553-683)||(29150914-29151044)
chr7 (499-701)||(26287112-26287339)
chr7 (556-670)||(16372381-16372491)
chr7 (569-668)||(24528351-24528449)
chr7 (618-703)||(12799455-12799540)
chr7 (548-701)||(15642209-15642362)
chr7 (597-703)||(6590948-6591054)
chr7 (569-669)||(9973459-9973558)
chr7 (572-668)||(33238002-33238097)
chr7 (572-668)||(47998975-47999070)
chr7 (703-776)||(2596444-2596517)
chr7 (586-647)||(29478176-29478236)
chr7 (572-668)||(2234630-2234725)
chr7 (572-668)||(16539412-16539507)
chr7 (572-668)||(16626155-16626250)
chr7 (572-668)||(32212654-32212749)
chr7 (572-668)||(33243179-33243274)
chr7 (572-668)||(42571945-42572040)
chr7 (572-668)||(47993800-47993895)
chr7 (639-701)||(30258166-30258228)
chr7 (574-668)||(33226416-33226509)
chr7 (699-814)||(10391404-10391516)
chr7 (596-685)||(13142884-13142973)
chr7 (572-668)||(21081039-21081136)
chr7 (569-665)||(28292506-28292600)
chr7 (572-668)||(47177119-47177214)
chr7 (563-665)||(6898359-6898461)
chr7 (586-666)||(3284740-3284820)
chr7 (572-668)||(12934397-12934492)
chr7 (572-668)||(17495403-17495498)
chr7 (572-668)||(17557716-17557811)
chr7 (572-668)||(43892858-43892953)
chr7 (584-667)||(1289334-1289416)
chr7 (699-741)||(15976804-15976846)
chr7 (572-613)||(22857741-22857782)
chr7 (569-602)||(27256239-27256272)
[»] chr6 (63 HSPs)
chr6 (494-701)||(2700073-2700281)
chr6 (499-698)||(6407830-6408029)
chr6 (501-698)||(12688899-12689096)
chr6 (511-698)||(11570719-11570906)
chr6 (499-701)||(8747708-8747910)
chr6 (498-703)||(33687568-33687773)
chr6 (499-701)||(21308960-21309159)
chr6 (498-645)||(19674238-19674385)
chr6 (699-827)||(16834455-16834583)
chr6 (522-703)||(14508933-14509114)
chr6 (555-703)||(24589129-24589277)
chr6 (498-610)||(11534736-11534848)
chr6 (498-610)||(11560246-11560358)
chr6 (555-703)||(29892226-29892374)
chr6 (505-637)||(11427975-11428108)
chr6 (553-701)||(12406320-12406468)
chr6 (557-701)||(20748251-20748395)
chr6 (499-696)||(25316535-25316739)
chr6 (499-696)||(26204029-26204233)
chr6 (553-701)||(13736645-13736793)
chr6 (555-701)||(11614059-11614205)
chr6 (593-685)||(16836139-16836231)
chr6 (593-701)||(17964526-17964634)
chr6 (700-830)||(12797062-12797191)
chr6 (559-703)||(22695236-22695380)
chr6 (502-564)||(17964634-17964696)
chr6 (569-668)||(19478145-19478243)
chr6 (569-666)||(3901909-3902006)
chr6 (555-701)||(22609556-22609696)
chr6 (568-668)||(12183000-12183100)
chr6 (569-668)||(13605092-13605190)
chr6 (584-649)||(35129640-35129704)
chr6 (572-668)||(22698243-22698338)
chr6 (572-668)||(31981560-31981655)
chr6 (572-668)||(34142080-34142175)
chr6 (572-668)||(34154696-34154791)
chr6 (644-703)||(11534676-11534735)
chr6 (644-703)||(11560186-11560245)
chr6 (496-683)||(2760240-2760427)
chr6 (592-681)||(32815051-32815138)
chr6 (568-668)||(5600972-5601072)
chr6 (557-701)||(9751775-9751920)
chr6 (569-668)||(10642706-10642805)
chr6 (701-814)||(19992718-19992828)
chr6 (556-602)||(2882821-2882867)
chr6 (572-668)||(21396699-21396794)
chr6 (572-668)||(24192480-24192575)
chr6 (572-668)||(29491237-29491332)
chr6 (572-668)||(34375919-34376014)
chr6 (556-602)||(2863518-2863564)
chr6 (569-607)||(11956762-11956800)
chr6 (570-696)||(12851809-12851937)
chr6 (572-613)||(21401755-21401796)
chr6 (499-548)||(22609481-22609530)
chr6 (572-613)||(24191437-24191478)
chr6 (584-630)||(14041703-14041749)
chr6 (624-701)||(4157336-4157413)
chr6 (572-605)||(6728397-6728430)
chr6 (504-545)||(13736814-13736855)
chr6 (499-548)||(15991829-15991878)
chr6 (499-548)||(15999491-15999540)
chr6 (700-741)||(22693832-22693873)
chr6 (612-669)||(31990898-31990955)
[»] scaffold0012 (1 HSPs)
scaffold0012 (498-701)||(166053-166257)
[»] scaffold0054 (2 HSPs)
scaffold0054 (499-698)||(25325-25524)
scaffold0054 (626-703)||(29209-29285)
[»] scaffold0057 (1 HSPs)
scaffold0057 (499-701)||(35560-35762)
[»] scaffold0045 (1 HSPs)
scaffold0045 (499-701)||(82991-83194)
[»] scaffold0240 (1 HSPs)
scaffold0240 (548-679)||(3966-4097)
[»] scaffold2020 (1 HSPs)
scaffold2020 (498-685)||(282-483)
[»] scaffold0009 (1 HSPs)
scaffold0009 (498-685)||(165012-165213)
[»] scaffold0008 (1 HSPs)
scaffold0008 (560-701)||(255804-255945)
[»] scaffold0061 (1 HSPs)
scaffold0061 (699-814)||(48187-48303)
[»] scaffold0017 (1 HSPs)
scaffold0017 (699-814)||(150330-150446)
[»] scaffold0015 (1 HSPs)
scaffold0015 (699-814)||(212600-212716)
[»] scaffold0060 (2 HSPs)
scaffold0060 (702-814)||(51146-51255)
scaffold0060 (563-668)||(37001-37105)
[»] scaffold0184 (1 HSPs)
scaffold0184 (555-701)||(2291-2436)
[»] scaffold0070 (2 HSPs)
scaffold0070 (699-800)||(60155-60256)
scaffold0070 (699-800)||(64357-64458)
[»] scaffold0108 (1 HSPs)
scaffold0108 (699-814)||(21482-21597)
[»] scaffold0018 (1 HSPs)
scaffold0018 (563-685)||(171700-171820)
[»] scaffold0097 (1 HSPs)
scaffold0097 (499-644)||(15197-15355)
[»] scaffold0132 (2 HSPs)
scaffold0132 (569-668)||(2772-2870)
scaffold0132 (569-668)||(10732-10830)
[»] scaffold0011 (4 HSPs)
scaffold0011 (569-668)||(1562-1660)
scaffold0011 (569-668)||(7043-7141)
scaffold0011 (642-700)||(155486-155544)
scaffold0011 (576-611)||(155552-155587)
[»] scaffold0128 (1 HSPs)
scaffold0128 (566-698)||(13265-13397)
[»] scaffold0055 (1 HSPs)
scaffold0055 (572-668)||(3058-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (572-668)||(81382-81477)
[»] scaffold0690 (1 HSPs)
scaffold0690 (699-814)||(6854-6966)
[»] scaffold0594 (1 HSPs)
scaffold0594 (572-668)||(9208-9303)
[»] scaffold0166 (2 HSPs)
scaffold0166 (572-668)||(13740-13835)
scaffold0166 (563-613)||(19252-19302)
[»] scaffold0067 (1 HSPs)
scaffold0067 (569-613)||(34023-34067)
[»] scaffold0014 (2 HSPs)
scaffold0014 (572-668)||(31545-31640)
scaffold0014 (572-668)||(26373-26468)
[»] scaffold0517 (1 HSPs)
scaffold0517 (572-668)||(3563-3658)
[»] scaffold1050 (1 HSPs)
scaffold1050 (584-701)||(1151-1268)
[»] scaffold0020 (1 HSPs)
scaffold0020 (564-602)||(1291-1329)


Alignment Details
Target: chr1 (Bit Score: 787; Significance: 0; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 787; E-Value: 0
Query Start/End: Original strand, 8 - 830
Target Start/End: Complemental strand, 47456046 - 47455224
Alignment:
Q  8 actagttcaattctaaaaacaaacaactctcgtaatgattaactacattatcatgtttaactgcataatcacaaacaagagttgcaaatttgacttagac 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47456046 actaattcaattctaaaaacaaacaactctcgtaatgattaactacattatcatgtttaactgcataatcacaaacaagagttgcaaatttgacttagac 47455947  T
Q  108 taacttacctgcaagtgatatgcaaacaaccttcagttttttcaacatagaacttgcaagtgggacaccttctccattttttctcgttagcaagctctct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455946 taacttacctgcaagtgatatgcaaacaaccttcagttttttcaacatagaacttgcaagtgggacaccttctccattttttctcgttagcaagctctct 47455847  T
Q  208 aacaagaagatcttcacgccctcgttcatcagcattcaatgtttgatactcctcacaatcaatcccgggatgccaaggaacatgacaccttgcacaaaac 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455846 aacaagaagatcttcacgccctcgttcatcagcattcaatgtttgatactcctcacaatcaatcccgggatgccaaggaacatgacaccttgcacaaaac 47455747  T
Q  308 aatctatgacaaaaaaggcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaatt 407  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455746 aatctatgacaaaaagggcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaatt 47455647  T
Q  408 taggaacagtaacaaaaagagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaatggcatacatgattcaagttctgttgtttt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455646 taggaacagtaacaaaaagagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaatggcatacatgattcaagttctgttgtttt 47455547  T
Q  508 tggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47455546 tggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 47455447  T
Q  608 gtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcattagtc 707  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  47455446 gtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcctagctacaactgttcgattaactactgcattagtc 47455347  T
Q  708 acatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatactttaaccgt 807  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  47455346 acatcctattggatgtgtttatgactttttttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgt 47455247  T
Q  808 tccttttagagctctctaattat 830  Q
    |||||||||||||||||||||||    
T  47455246 tccttttagagctctctaattat 47455224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 112 - 478
Target Start/End: Complemental strand, 47461043 - 47460677
Alignment:
Q  112 ttacctgcaagtgatatgcaaacaaccttcagttttttcaacatagaacttgcaagtgggacaccttctccattttttctcgttagcaagctctctaaca 211  Q
    ||||||||| |||||||||||||| || ||  |||| |||||||||||| ||||  | ||||||||| ||||||| ||||  ||||||||||||||||||    
T  47461043 ttacctgcatgtgatatgcaaacagccatcccttttctcaacatagaacctgcatcttggacaccttttccatttcttcttattagcaagctctctaaca 47460944  T
Q  212 agaagatcttcacgccctcgttcatcagcattcaatgtttgatactcctcacaatcaatcccgggatgccaaggaacatgacaccttgcacaaaacaatc 311  Q
    ||||||||||| |  |||| ||||||  |||||||| | ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | ||    
T  47460943 agaagatcttcccttcctctttcatccacattcaatttctgatactcctcacaaccaatcccaggatgccaaggaacatgacactttgcacaaaatagtc 47460844  T
Q  312 tatgacaaaaaaggcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaatttagg 411  Q
    |||||||| ||  ||| ||||||||||||| ||||||    ||||||| |||||| | |||||||||||||||||||||||| || || ||||| |||||    
T  47460843 tatgacaagaagcgcactcagattccctaacatcttctcttccttcatcctcatcaagcaacatagcagaacaatccttaaaggggcaatagaacttagg 47460744  T
Q  412 aacagtaacaaaaagagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaat 478  Q
    |||||||| ||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  47460743 aacagtaagaaaaaaagcctcacataatgcatcattccacttatcaatcaattctttaggaagcaat 47460677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 499 - 699
Target Start/End: Complemental strand, 47451394 - 47451194
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  47451394 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaaattattactaggttgagtcacgaccaggtcgctctcttta 47451295  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  47451294 agacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaacaagctcaactacaactgttcgattaactact 47451195  T
Q  699 g 699  Q
    |    
T  47451194 g 47451194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 19799182 - 19798980
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  19799182 tgttgtttttggattttcaaactgttgtatttggattttcaaattctattatctatcgaagttgttactaggttgagtcacgatcagatcgctctcttta 19799083  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  19799082 agacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactact 19798983  T
Q  699 gca 701  Q
    |||    
T  19798982 gca 19798980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 23192986 - 23192785
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23192986 tgttgtttttggattttcaaactgttgtgtttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 23192887  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  23192886 agacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataaaacaag-ccagctacaattgttcgattaactact 23192788  T
Q  699 gca 701  Q
    |||    
T  23192787 gca 23192785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 51041630 - 51041430
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  51041630 tgttgtttttggatttccaaactgatgtatttggatttccaaattctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctct-ttta 51041532  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  51041531 agacgtttcgtggcactgccc-aaattgtgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaattact 51041433  T
Q  699 gca 701  Q
    |||    
T  51041432 gca 51041430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 39588536 - 39588334
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  39588536 tgttgtttttggatttccaaatagttgtatttggatttccaaattatattatccaccgaaattgttactaggttaagtcacgatcaggtcgctctcttta 39588437  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| || |||||||||||||||||||| |||| ||||||||  |||||||||||| ||||| || |||||| ||||||||||||||||    
T  39588436 agacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccaggataaagcaagctcatctacaattgttcgattaactact 39588337  T
Q  699 gca 701  Q
    |||    
T  39588336 gca 39588334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 33301349 - 33301147
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| | | ||||||||||||| |||| |||||||||||||| ||||||||    
T  33301349 tgttgtttttggatttccaatctgttgtatttggatttccaaattctattatctatcaaagttgttactagcttgaatcacgaccaggtcgttctcttta 33301250  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||   || |||||||||| || |||||||||    
T  33301249 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaatttcatctacaactgtgcggttaactact 33301150  T
Q  699 gca 701  Q
    |||    
T  33301149 gca 33301147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 40165906 - 40166108
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| ||||| ||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  40165906 tgttgtttttagattttcaaactgttgtatttggattaccatattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctctcttta 40166005  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| || |||| |||||||||| |||||||||||||| ||||||||||| | ||||||||||||    
T  40166006 agacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaacgccgcctctaggataaaacaagcacaactacaactatacgattaactact 40166105  T
Q  699 gca 701  Q
    |||    
T  40166106 gca 40166108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 16649781 - 16649580
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  16649781 tgttgtttttggattttcaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctctcttta 16649682  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| |||||| || |||||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||| ||||||||||  | |||||||||    
T  16649681 agacgttt-gtggcactgtccaaaattgtgcaagatagactatcaaccacgccgcctccgggataaaacaagtccagctacaactgtgtggttaactact 16649583  T
Q  699 gca 701  Q
    |||    
T  16649582 gca 16649580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 26927891 - 26927689
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  26927891 tgttgtttttggattttcaaactgttgtatttggatttttaaattctattatctaccgaagttgttactaggttgagtcacgactaagtcgctctcttta 26927792  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| |  |||||||||||||| |||||||||| |  |||||||||    
T  26927791 agacgtttcgtggcattgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaaaataaaacaagcccagctacaactgtacacttaactact 26927692  T
Q  699 gca 701  Q
    |||    
T  26927691 gca 26927689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 10135382 - 10135584
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| ||||||||||   ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10135382 tgttgtttttgtatttccaaactcctgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 10135481  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| | || ||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||  | ||||||| || |||||||||    
T  10135482 agacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctctaggataaaacaagcccagttgcaactgtgcggttaactact 10135581  T
Q  699 gca 701  Q
    |||    
T  10135582 gca 10135584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 125 - 479
Target Start/End: Complemental strand, 47467696 - 47467342
Alignment:
Q  125 atatgcaaacaaccttcagttttttcaacatagaacttgcaagtgggacaccttctccattttttctcgttagcaagctctctaacaagaagatcttcac 224  Q
    ||||||||||| || ||| ||||||||||||||||  | ||  | ||||||||| |||| |||||||  ||||| ||||| || ||||| |||||||| |    
T  47467696 atatgcaaacatccatcatttttttcaacatagaatctacatcttggacaccttttccactttttcttattagccagctccctcacaaggagatcttccc 47467597  T
Q  225 gccctcgttcatcagcattcaatgtttgatactcctcacaatcaatcccgggatgccaaggaacatgacaccttgcacaaaacaatctatgacaaaaaag 324  Q
      |||| ||||||  |||||| ||||||| ||||||||||| ||| ||  |||||||| |  |||||||||||||||||||||| ||||||||||||  |    
T  47467596 ttcctctttcatccacattcattgtttgaaactcctcacaaccaaccctaggatgccacgtgacatgacaccttgcacaaaacagtctatgacaaaaggg 47467497  T
Q  325 gcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaatttaggaacagtaacaaaa 424  Q
     || |||||||||||||||||||   |  ||||||| ||||||| || ||||||||| ||||||||||| ||||| ||||| |||||||||| || ||||    
T  47467496 tcactcagattccctaatatcttgtccatcttcattttcatccagcatcatagcagagcaatccttaaagggacaatagaacttaggaacagcaagaaaa 47467397  T
Q  425 agagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaatg 479  Q
    | ||| ||||||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  47467396 aaagcctcacacaatgcatcattccacctatcaatcaactcttttggaagcaatg 47467342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 16035528 - 16035736
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctat------tatccaccgaagttgttactaggttgagtcacgaccaggtcgctc 592  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||       |||| ||| |||||||||||||||||||||||||||||||||| |    
T  16035528 tgttgtttttggatttccaaactgttgtatttggattttcaaattctaaaatgaatatctaccaaagttgttactaggttgagtcacgaccaggtcgccc 16035627  T
Q  593 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgatta 692  Q
    ||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||  | |||    
T  16035628 tctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagctcatctacaaatgtgtggtta 16035727  T
Q  693 actactgca 701  Q
    |||||||||    
T  16035728 actactgca 16035736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 504 - 646
Target Start/End: Original strand, 3094045 - 3094187
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094045 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 3094144  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 646  Q
    |||| ||||| |||||||||||||||||| |||| ||||||||    
T  3094145 tttcatggcactgcccaaaattgtgcaaggcagactatcaacc 3094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 499 - 631
Target Start/End: Original strand, 25855097 - 25855229
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25855097 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 25855196  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaa 631  Q
    ||||||||||||||| |||||||||||||||||    
T  25855197 agacgtttcgtggcactgcccaaaattgtgcaa 25855229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 504 - 703
Target Start/End: Original strand, 38620624 - 38620822
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    |||||| |||| ||||| |||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| ||||||| || ||||||||||||||    
T  38620624 tttttgaattttcaaactgttgtatttggatttccaaattttattatctaccgaagttattattaggttgagtcgcgaccagatcactctctttaagacg 38620723  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |||||| ||| || ||||||||||||||| |||| ||||||| |||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||    
T  38620724 tttcgt-gcattgtccaaaattgtgcaaggcagactatcaactacgccgcctccaagataaaacaagtccaactacaactgtgcggttaactactgcatt 38620822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 10140015 - 10140217
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| ||| ||||||   ||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  10140015 tgttgtttttgtattcccaaactactgtatttggattttcaagatctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctcttta 10140114  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    | ||||||||||||| | | |||||||||||||| ||||  |||||||||||| |||| ||||||||||||||||| || ||||||| || |||||||||    
T  10140115 acacgtttcgtggcactactcaaaattgtgcaaggcagacaatcaaccacgccacctctaggataaaacaagcccagctgcaactgtgcggttaactact 10140214  T
Q  699 gca 701  Q
    |||    
T  10140215 gca 10140217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 10136999 - 10137127
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  10136999 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 10137098  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  10137099 tttaaccgttccttttagagctctctaat 10137127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 501 - 670
Target Start/End: Complemental strand, 18784716 - 18784547
Alignment:
Q  501 ttgtttttggatttccaaacagttgtat-ttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaa 599  Q
    |||||||||||||||||||| ||||||| |||| |||| |||||||||| || | ||||||||||||||||||||||||||| ||||||||||| |||||    
T  18784716 ttgtttttggatttccaaactgttgtatgttggttttctaaattctattttctagcgaagttgttactaggttgagtcacgatcaggtcgctct-tttaa 18784618  T
Q  600 gacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 670  Q
    ||| |||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  18784617 gacatttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaag 18784547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 25845430 - 25845558
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| | | ||||||||||||||||    
T  25845430 gcattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttattaatacgtgcacgatatac 25845529  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    ||||| |||||||||||||||||||||||    
T  25845530 tttaatcgttccttttagagctctctaat 25845558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 556 - 702
Target Start/End: Original strand, 12259979 - 12260125
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 655  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||    
T  12259979 gaagttgttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaaccacgccgtct 12260078  T
Q  656 ccaggataaaacaagcccaactacaactgttcgattaactactgcat 702  Q
      |||||||||||| | ||  ||||||| | || |||||||||||||    
T  12260079 ttaggataaaacaaacacatgtacaactatgcggttaactactgcat 12260125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 499 - 610
Target Start/End: Original strand, 16832027 - 16832138
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||  ||||||||||||||||||||||||||||    
T  16832027 tgttgtatttggatttccaaaccgttgtatttggatttccaaattctattatctacttaagttgttactatattgagtcacgaccaggtcgctctcttta 16832126  T
Q  599 agacgtttcgtg 610  Q
    ||||||| ||||    
T  16832127 agacgttccgtg 16832138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 25843738 - 25843821
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgac 582  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25843738 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgac 25843821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 548 - 670
Target Start/End: Original strand, 8900229 - 8900351
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||| || || | ||| |||||||| ||| | |||||| ||    
T  8900229 tatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgacactgtctaaagttgtgcaaaacatactatcaatca 8900328  T
Q  648 cgccgcctccaggataaaacaag 670  Q
    | |||||||||||||||||||||    
T  8900329 caccgcctccaggataaaacaag 8900351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 555 - 701
Target Start/End: Original strand, 11806341 - 11806487
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||| || ||| |||| | || |||| |||| ||||||||||||||||    
T  11806341 cgaagttgttattaggttgagtcacaaccagatcgctctctttaagatgtttcgtgacactgcgcaaagtggtacaaggcagactatcaaccacgccgcc 11806440  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    | ||| |||||| |||  ||||||||| ||| || |||| |||||||    
T  11806441 ttcagaataaaagaagttcaactacaattgtgcggttaaatactgca 11806487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 563 - 669
Target Start/End: Complemental strand, 2493923 - 2493817
Alignment:
Q  563 ttactaggttgagtcacgacc-aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    ||||||||||||||| | | | |||||||||||||||||||||||||||||| |||||||||||||||||| || | ||||||||||| |||| ||||||    
T  2493923 ttactaggttgagtcgcaaactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-caaactatcaaccacggcgcccccagga 2493825  T
Q  662 taaaacaa 669  Q
    ||||||||    
T  2493824 taaaacaa 2493817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 569 - 669
Target Start/End: Original strand, 10106100 - 10106199
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  10106100 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 10106198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 584 - 668
Target Start/End: Original strand, 12906166 - 12906248
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  12906166 aggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-cagactatcaaccacgacgcc-ccaggataaaaca 12906248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 38734272 - 38734370
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | |||  | |||||||||  ||| || ||||||||||| |||||||||||||||    
T  38734272 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 38734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 603 - 701
Target Start/End: Original strand, 8137969 - 8138067
Alignment:
Q  603 gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||| |||| ||| ||||||||| |||| |||||||||   ||||||||||||||||||||| || |||||||||| || ||||||||||||    
T  8137969 gtttcgtggcattgcctaaagttgtgcaaggcagactatcaaccatatcgcctccaggataaaacaagctcagctacaactgtgcggttaactactgca 8138067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 699 - 815
Target Start/End: Original strand, 11810583 - 11810696
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||| | |||||||||||||||||||| |||||||||   ||| |||| ||||||||||||||| | ||||||||  ||||||||| || ||| ||     
T  11810583 gcattagccccatcctattggatgtgtttaggactttctt---agttattcatttcgtcaaaggatcaactaattcttcatcagtacgtacatgatctat 11810679  T
Q  799 tttaaccgttcctttta 815  Q
    |||||||||||||||||    
T  11810680 tttaaccgttcctttta 11810696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 563 - 668
Target Start/End: Complemental strand, 27761944 - 27761839
Alignment:
Q  563 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    ||||||||||||||| | ||| ||||| |||||||||| ||||||||||||| || ||||||||||||||| |||| ||||||||||| || | ||||||    
T  27761944 ttactaggttgagtcgcagactaggtcactctctttaaaacgtttcgtggcactgtccaaaattgtgcaag-cagactatcaaccacgacgtccccagga 27761846  T
Q  662 taaaaca 668  Q
    |||||||    
T  27761845 taaaaca 27761839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 683
Target Start/End: Original strand, 5346652 - 5346773
Alignment:
Q  562 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    ||||||||||||||| || | ||||||| ||||||||| |||||| |||||| || ||||| |||| ||| ||||| |||||| ||||||||||||| ||    
T  5346652 gttactaggttgagttacaatcaggtcgttctctttaaaacgttttgtggcactgtccaaatttgtacaatacagactatcaatcacgccgcctccaaga 5346751  T
Q  662 taaaacaagcccaactacaact 683  Q
    | |||||||  || ||||||||    
T  5346752 tgaaacaagttcagctacaact 5346773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 584 - 685
Target Start/End: Complemental strand, 33381004 - 33380905
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 683  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||||| |||| ||||||||||| || | ||| |||||||| |||||| ||||||||    
T  33381004 aggtcgctctctttaagacgtttcgtgacactgctcaaaattgtgcaag-cagactatcaaccacgacgtccccaagataaaac-agcccagctacaact 33380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 615 - 703
Target Start/End: Original strand, 16833526 - 16833614
Alignment:
Q  615 tgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    ||||||||||| ||||||||| | |||||||| |||| | ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  16833526 tgcccaaaattatgcaagacaaactatcaacctcgccacatccaggataaaacagcctcagctacaactgttcgattaactactgcatt 16833614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 13890810 - 13890908
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||| | |||| | ||| || |||||||||  ||| || ||||||| ||| |||||||||||||||    
T  13890810 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactaccc-aagttgtgcaaggtagactaacaaccacaccgtctccaggataaaaca 13890908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 39747263 - 39747165
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| | ||| || |||||||||  ||| || |||||||| || |||||||||||||||    
T  39747263 ggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactagcaaccacgtcgtctccaggataaaaca 39747165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 701
Target Start/End: Original strand, 25843822 - 25843884
Alignment:
Q  639 tatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||    
T  25843822 tatcaaccacgccgcctccagtataaaacaagcccagctacaactgtgcggttaactactgca 25843884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 5724979 - 5725074
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  5724979 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 5725074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 36684810 - 36684715
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  36684810 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 36684715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 685
Target Start/End: Complemental strand, 24159904 - 24159783
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||   | |||||||||||||||||| |||| ||||||| ||| || | ||||||    
T  24159904 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtaatactgcccaaaattgtgcaag-cagactatcaacgacgacgtccccagga 24159806  T
Q  662 taaaacaagcccaactacaactgt 685  Q
    |||||| ||| || ||||||||||    
T  24159805 taaaac-agctcagctacaactgt 24159783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 26651264 - 26651166
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||| |||| | |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  26651264 ggttgagtcacgaccaggtcactctctttaagatgttttgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 26651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 563 - 668
Target Start/End: Original strand, 36724698 - 36724803
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| ||||||| | || |||||||||||||||||||||||  ||||| | |||||||||||||||| ||||  |||||||||| |||| ||| ||    
T  36724698 ttactaggctgagtcatggactaggtcgctctctttaagacgttttatggcactacccaaaattgtgcaag-cagacaatcaaccacgacgcccccaaga 36724796  T
Q  662 taaaaca 668  Q
    |||||||    
T  36724797 taaaaca 36724803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 3584601 - 3584696
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| || ||   || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3584601 tgagtcacgaccaggtcgctttctttaagacgtttcgcgg-aactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3584696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 11251208 - 11251113
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  11251208 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 11251113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 34318319 - 34318224
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34318319 tgagtcacgaccaagtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34318224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 37404511 - 37404416
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  37404511 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 37404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 5602523 - 5602425
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||| | |||  | |||||||||  ||| || ||||||||||| ||||| |||||||||    
T  5602523 ggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctccaagataaaaca 5602425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 665
Target Start/End: Complemental strand, 4633031 - 4632929
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    |||||||||||||||||||| | ||||||||||||||||||||| | |||| |  || || |||||||||  || ||||||| |||| | |||||| |||    
T  4633031 ttactaggttgagtcacgactatgtcgctctctttaagacgttttgcggcactatccgaatttgtgcaaggtaggttatcaatcacgactcctccatgat 4632932  T
Q  663 aaa 665  Q
    |||    
T  4632931 aaa 4632929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 584 - 669
Target Start/End: Complemental strand, 23193306 - 23193222
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    |||||||||||| ||||||||||| |||||   ||||||||| |||||| |||| ||||||||||| |||| ||| ||||||||||    
T  23193306 aggtcgctctctataagacgtttcatggcacaacccaaaattatgcaag-cagactatcaaccacgacgcccccatgataaaacaa 23193222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 5730105 - 5730200
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| || ||   || ||||||||||||  ||| || ||||| | ||| |||||||||||||||    
T  5730105 tgagtcacgaccaggtcgctttctttaagacgtttcgcgg-aactacctaaattgtgcaaggtagactagcaaccgcaccgtctccaggataaaaca 5730200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 608 - 696
Target Start/End: Complemental strand, 25779376 - 25779288
Alignment:
Q  608 gtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    |||||| || |||||||||||||||| | ||||||| ||||||| | | |||||||||||||  ||||| |||| ||| ||||||||||    
T  25779376 gtggcactgtccaaaattgtgcaagaaatattatcagccacgccacattcaggataaaacaattccaacgacaattgtacgattaacta 25779288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 37409632 - 37409537
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| |||||  ||||||||||||||    
T  37409632 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaaca 37409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 14582096 - 14582194
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||| | |||  | |||||||||  ||| || ||||||| ||| |||||||||||||||    
T  14582096 ggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactaccc-tagttgtgcaaggtagactaacaaccacaccgtctccaggataaaaca 14582194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 607
Target Start/End: Complemental strand, 8267929 - 8267891
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttc 607  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8267929 ggttgagtcacgaccaggtcgctttctttaagacgtttc 8267891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 608
Target Start/End: Complemental strand, 19422982 - 19422937
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 608  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  19422982 ttactgggttgagtcacgatcagatcgctctctttaagacgtttcg 19422937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 572 - 613
Target Start/End: Original strand, 27716443 - 27716484
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  27716443 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 27716484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 698
Target Start/End: Complemental strand, 28434680 - 28434544
Alignment:
Q  561 tgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagg 660  Q
    |||||||||||||||| || | || | | |||| ||||||||||||| || || || | ||| |||||||  ||||| ||||||||  |||| |||||||    
T  28434680 tgttactaggttgagttacaagcatgccactctttttaagacgtttcatgacactgtc-aaacttgtgcaccacagactatcaaccttgccgtctccagg 28434582  T
Q  661 ataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||  ||||||||| ||| |  |||||||||    
T  28434581 ataaaacaagttcaactacaattgtgcagttaactact 28434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 46696596 - 46696645
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    |||||||||||||||| ||||| ||| ||||| |||||||||||||||||    
T  46696596 tgttgtttttggattttcaaactgttttatttagatttccaaattctatt 46696645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 584 - 668
Target Start/End: Original strand, 31063968 - 31064050
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||| ||||||||||| |  |||||||||| |||| || | ||||||||||| || | |||||||||||||    
T  31063968 aggtcgctctctttaagaggtttcgtggcactttccaaaattgttcaag-caaactatcaaccacgacgtc-ccaggataaaaca 31064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 666
Target Start/End: Complemental strand, 28858126 - 28858065
Alignment:
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 666  Q
    |||||||||| ||| |||||||||||||| |||| ||||||||||| || | |||||||||||    
T  28858126 tttcgtggcattgctcaaaattgtgcaag-cagactatcaaccacgacgtccccaggataaaa 28858065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 699 - 765
Target Start/End: Complemental strand, 37408591 - 37408525
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatc 765  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| |||  | | ||||||||||||||||||    
T  37408591 gcattagtctcatcctactggatgtatttgtgactttctctctgtttagtcctttcgtcaaaggatc 37408525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 613
Target Start/End: Complemental strand, 11387925 - 11387884
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||| | |||||||||||||| ||||    
T  11387925 tgagtcacgaccaggtcgctttttttaagacgtttcgcggca 11387884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 12259911 - 12259959
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||||||||    
T  12259911 tgttgtttttggatttccacactgttatatttggatttcc-aattctatt 12259959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 632
Target Start/End: Complemental strand, 25661899 - 25661858
Alignment:
Q  591 tctctttaagacgtttcgtggcaatgcccaaaattgtgcaag 632  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  25661899 tctctttaagacgttttgtggcactacccaaaattgtgcaag 25661858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 584 - 681
Target Start/End: Original strand, 32987252 - 32987347
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 681  Q
    ||||| |||||||||||| |||| |||||| |||| ||||||||||||| |||| |||||| || | |||| | |||| ||||| || ||||||||||    
T  32987252 aggtcactctctttaagatgttttgtggcactgcctaaaattgtgcaag-cagactatcaatcatgacgcccctaggagaaaac-agtccaactacaa 32987347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 602
Target Start/End: Complemental strand, 41098050 - 41098017
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagac 602  Q
    ||||||||||||||||||||||| ||||||||||    
T  41098050 ggttgagtcacgaccaggtcgctttctttaagac 41098017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 183; Significance: 1e-98; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 10056 - 9854
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10056 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 9957  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9956 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactact 9857  T
Q  699 gca 701  Q
    |||    
T  9856 gca 9854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 4e-96; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 29168142 - 29167940
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29168142 tgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 29168043  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29168042 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 29167943  T
Q  699 gca 701  Q
    |||    
T  29167942 gca 29167940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 556621 - 556823
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  556621 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 556720  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  556721 agacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 556820  T
Q  699 gca 701  Q
    |||    
T  556821 gca 556823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 561393 - 561595
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  561393 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 561492  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  561493 agacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 561592  T
Q  699 gca 701  Q
    |||    
T  561593 gca 561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 499 - 699
Target Start/End: Original strand, 41996591 - 41996791
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  41996591 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttta 41996690  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  41996691 agacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactact 41996790  T
Q  699 g 699  Q
    |    
T  41996791 g 41996791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 499 - 699
Target Start/End: Original strand, 42001360 - 42001560
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42001360 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 42001459  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  42001460 agacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactact 42001559  T
Q  699 g 699  Q
    |    
T  42001560 g 42001560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 12102950 - 12103153
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttcc-aaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  12102950 tgttgtttttggatttccaaactgttgtatttggatttcccaaattctattatctaccgaagttgttactaggttgagttacgaccaggtcgctctcttt 12103049  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  12103050 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaaatgtgcgattaactac 12103149  T
Q  698 tgca 701  Q
    ||||    
T  12103150 tgca 12103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 26667198 - 26667400
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| |||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26667198 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26667297  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  26667298 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactact 26667397  T
Q  699 gca 701  Q
    |||    
T  26667398 gca 26667400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 26938795 - 26938997
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| |||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26938795 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26938894  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  26938895 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactact 26938994  T
Q  699 gca 701  Q
    |||    
T  26938995 gca 26938997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 504 - 701
Target Start/End: Original strand, 36428640 - 36428837
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36428640 tttttggatttccaaactgttgtatttggatttccaaattctattatctaacgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 36428739  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||| | || | |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36428740 ttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgca 36428837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 12502069 - 12501866
Alignment:
Q  499 tgttgtttttggatttccaaacagtt-gtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  12502069 tgttgtttttggattttcaaactgttcgtatttggatttccaaattctattatctactgaagttgttactaggttgagtcatgaccaggtcgctctcttt 12501970  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  12501969 aagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcggttaactac 12501870  T
Q  698 tgca 701  Q
    ||||    
T  12501869 tgca 12501866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 522 - 701
Target Start/End: Complemental strand, 36942411 - 36942232
Alignment:
Q  522 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 621  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  36942411 gttgtttttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaa 36942312  T
Q  622 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36942311 aattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgca 36942232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 39522974 - 39523177
Alignment:
Q  499 tgttgtttttggatttccaaacagtt-gtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  39522974 tgttgtttttggatttccaaactgttagtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttt 39523073  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||| || ||||||||    
T  39523074 aagacgtttcgtggcaccgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactac 39523173  T
Q  698 tgca 701  Q
    ||||    
T  39523174 tgca 39523177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 6155588 - 6155386
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||    
T  6155588 tgttgattttggttttccaaactgttgtatttggatttccaaattctattatctaccgaaattgttactaggttgagtcacgatcaggtcgctctcttta 6155489  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| || |||||||| | ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6155488 agacgtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccaggataaaacaagcccagctacaactgttcgattaactact 6155389  T
Q  699 gca 701  Q
    |||    
T  6155388 gca 6155386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 39518336 - 39518538
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  39518336 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 39518435  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||||||||||  ||||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||| || ||||||| || |||||||||    
T  39518436 agacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactact 39518535  T
Q  699 gca 701  Q
    |||    
T  39518536 gca 39518538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 12045309 - 12045106
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  12045309 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttt 12045210  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||  | |||||||||| || ||||||||    
T  12045209 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataaaacaagcatagctacaactgtgcggttaactac 12045110  T
Q  698 tgca 701  Q
    ||||    
T  12045109 tgca 12045106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 522 - 701
Target Start/End: Complemental strand, 36937657 - 36937478
Alignment:
Q  522 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 621  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  36937657 gttgtttttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaa 36937558  T
Q  622 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36937557 aattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgca 36937478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 496 - 685
Target Start/End: Complemental strand, 37248967 - 37248778
Alignment:
Q  496 ttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct 595  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37248967 ttctgttgtttttggatttccaaactgttatatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 37248868  T
Q  596 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 685  Q
    ||||||| |||||||||| | || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  37248867 ttaagacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgt 37248778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 501 - 701
Target Start/End: Original strand, 36423565 - 36423765
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36423565 ttgtttttggattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcgcgaccaggtcgctctctttaag 36423664  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    |||||||| |||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||| |||    
T  36423665 acgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaagcccagctactactgtttgattaactaatgc 36423764  T
Q  701 a 701  Q
    |    
T  36423765 a 36423765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 499 - 698
Target Start/End: Original strand, 7451684 - 7451883
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7451684 tgttgtttttggattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 7451783  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| || ||||||||||||||| |||| |||||||||||| |||||||||||||||||||| || || ||||||| || |||||||||    
T  7451784 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcggttaactact 7451883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 41587329 - 41587127
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||| |||| |||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  41587329 tgttgtttttggatttctaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactagtttgagtcacgaccaggttgctctcttta 41587230  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||||||| || ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  41587229 agacgtttcgtgacactgttcaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 41587130  T
Q  699 gca 701  Q
    |||    
T  41587129 gca 41587127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 498 - 701
Target Start/End: Original strand, 3665856 - 3666060
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 596  Q
    ||||||||||||||||||||||| ||||||||| || ||| ||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  3665856 ctgttgtttttggatttccaaactgttgtattttggtttttcaaattctattttctaccgaagttgttactaggttgagtcacgactaggtcgctctctt 3665955  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
     |||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||| |||||||||||||| || |||||||    
T  3665956 caagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctctaggataaaacaagtccaactacaactgtgcggttaacta 3666055  T
Q  697 ctgca 701  Q
    |||||    
T  3666056 ctgca 3666060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 10759992 - 10759792
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    ||||||| |||||||||||||||||||||||||||||||||||||||||     
T  10759992 tgttgtttttggatttccaaactgttgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct- 10759894  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 694  Q
    |||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||||| || |||||    
T  10759893 tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccatttacaactgtgcggttaac 10759794  T
Q  695 ta 696  Q
    ||    
T  10759793 ta 10759792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 499 - 703
Target Start/End: Complemental strand, 6514769 - 6514566
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| ||||  |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||    
T  6514769 tgttgtttttg-attttaaaactgttgtatttggatttccaaattctattatctaccaaagttgttactaggttgagtcacgaccaagtcactctcttta 6514671  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||  | ||||||||||  | |||||||||    
T  6514670 agacgtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccaggataaaacaagcttagctacaactgtgtggttaactact 6514571  T
Q  699 gcatt 703  Q
    |||||    
T  6514570 gcatt 6514566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 37652999 - 37652827
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37652999 tgttgtttttggatttccaaattgttgtatttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgatcaggtcgctctcttta 37652900  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagc 671  Q
    |||||||||||| || || ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  37652899 agacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaacaagc 37652827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 506 - 698
Target Start/End: Original strand, 40147828 - 40148020
Alignment:
Q  506 tttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtt 605  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| || ||||||||||||||||||| |||    
T  40147828 tttgaatttccaaactattgtatttggatttccaaattctattatctatcgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgtt 40147927  T
Q  606 tcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| || || ||| ||||| ||||||||||    
T  40147928 tcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaataagctcagcttcaattgttcaattaactact 40148020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 504 - 701
Target Start/End: Complemental strand, 11981443 - 11981247
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttga-gtcacgaccaggtcgctctctttaagac 602  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  | | |||||||||||| ||||||||||    
T  11981443 tttttggattttcaaactgttgtagttggatttccaaattctattatctaccgaagttgttactaggttgattttatgaccaggtcgctttctttaagac 11981344  T
Q  603 gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||| |||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  11981343 gttttgtggcactgcccaaaattgtgcaagacaga--atcaaccacgccgcctccagaataaaacaagcacatctacaactgttcgattaactattgca 11981247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 20181233 - 20181030
Alignment:
Q  499 tgttgtttttggatttcc-aaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||   |||| |||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||||||||| ||||||||    
T  20181233 tgttgtttttggattttttaaaccgttgtatttggatttccaaattctattatctactgaaattgttattaggttgagtcacgaccaggtcactctcttt 20181134  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| || |||||||| ||||||||||| ||| ||||||||| |||||| |||||||||||| ||||||||| ||| || ||||||||    
T  20181133 aagacgtttcgtggcattgtccaaaattatgcaagacagactattaaccacgccacctccatgataaaacaagctcaactacaattgtgcggttaactac 20181034  T
Q  698 tgca 701  Q
    ||||    
T  20181033 tgca 20181030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 12042101 - 12041899
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggt--tgagtcacgaccaggtcgctctctt 596  Q
    |||||||||||||||| ||||| |||  |||||||||| |||||| | ||||| || ||||||||||||||||  |||||||||||||||||| ||||||    
T  12042101 tgttgtttttggattttcaaactgtt--atttggattttcaaattatgttatctactgaagttgttactaggtcatgagtcacgaccaggtcgttctctt 12042004  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||||||||||| ||||||||| | |||||| || | |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  12042003 taagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaacta 12041904  T
Q  697 ctgca 701  Q
    |||||    
T  12041903 ctgca 12041899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 499 - 685
Target Start/End: Complemental strand, 35680047 - 35679858
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||    ||||||| ||||||| |||||||||||||||||| | | |||||||||||    
T  35680047 tgttgtttttggattttcaaattgttgtatttggatttccaaattcattatattatctaccgaagctgttactaggttgagtcatggc-aggtcgctctc 35679949  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 685  Q
    ||||||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35679948 tttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaactgt 35679858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 26668951 - 26669079
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  26668951 gcattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 26669050  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  26669051 tttaaccgttccttttagagctctctaat 26669079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 26940548 - 26940676
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  26940548 gcattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 26940647  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  26940648 tttaaccgttccttttagagctctctaat 26940676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 503 - 701
Target Start/End: Complemental strand, 32461702 - 32461516
Alignment:
Q  503 gtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 602  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||    
T  32461702 gtttttggatttccaaa---ttgtatttggatttctaaattctattatctaccgaagt---------gttgagtcacgaccaggtcgctctctttaagac 32461615  T
Q  603 gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || || ||||||| || ||||||||||||    
T  32461614 gttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagttcagctgcaactgtgcggttaactactgca 32461516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 558443 - 558571
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  558443 gcattagtcccatcctgttggatgtgtttaggactttctttctagcaattcctttcgtcaaaggattggctaattctttatcagtacgtgcacgatatac 558542  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  558543 tttaaccgttccttttagagctctctaat 558571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 39520059 - 39520187
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||| |  |||||||||||||||||    
T  39520059 gcattagtctcatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactgattctttcttcgtacgtgcacgatatac 39520158  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  39520159 tttaaccgttccttttagagctctctaat 39520187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 41998389 - 41998517
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||||||    
T  41998389 gcattagtcccatcttgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgtacgatatac 41998488  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  41998489 tttaaccgttccttttagagctctctaat 41998517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 36940611 - 36940483
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||    
T  36940611 gcattagtcccatcctgttggatgggtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcaatacgtgcacgatatac 36940512  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||| ||||||||||||||||||    
T  36940511 tttaaccgtttcttttagagctctctaat 36940483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 711 - 830
Target Start/End: Original strand, 36425326 - 36425445
Alignment:
Q  711 tcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatactttaaccgttcc 810  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||| || ||||||||| |  |||||||||||||||||||||||||||||    
T  36425326 tcctattggatgtgtttaggactttttttctagtaattcctttcgtcaaaggattgactaattctttatttgtacgtgcacgatatactttaaccgttcc 36425425  T
Q  811 ttttagagctctctaattat 830  Q
    ||||||||||||||||||||    
T  36425426 ttttagagctctctaattat 36425445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 553 - 698
Target Start/End: Complemental strand, 12102946 - 12102801
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| || |||||||||||||||  ||| |||||||||| |||    
T  12102946 accgaagttgttactaggttgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccacaccg 12102847  T
Q  653 cctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
     | ||||||||||||||| |||||||||||||| || |||||||||    
T  12102846 tcaccaggataaaacaagaccaactacaactgtgcggttaactact 12102801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 555 - 701
Target Start/End: Complemental strand, 16116362 - 16116216
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||||||||| ||||||| ||||||||| |||| |||||| |||| |||||||||| || ||||||||||||||||||||| | ||||||||||||| ||    
T  16116362 cgaagttgttgctaggttaagtcacgactaggttgctctccttaaaacgtttcgtgacactgcccaaaattgtgcaagacaaactatcaaccacgccacc 16116263  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||  |||||||||||  |||||||||| || |  ||||||||||||    
T  16116262 tcctagataaaacaagttcaactacaacagtactgttaactactgca 16116216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 556 - 664
Target Start/End: Complemental strand, 15414993 - 15414885
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 655  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||| ||||| |||||| ||||||||||||||  || |||| |||||||||||||||||    
T  15414993 gaagttgttacttggttgagtcacgactagaacgctctctttaagtcgttttgtggcactgcccaaaattgtgtgaggcagaatatcaaccacgccgcct 15414894  T
Q  656 ccaggataa 664  Q
    |||||||||    
T  15414893 ccaggataa 15414885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 499 - 581
Target Start/End: Complemental strand, 37550170 - 37550089
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacga 581  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  37550170 tgttgtttttggattttcaaattgttgtatttggatttccaaattctattatctaccgaagttg-tattaggttgagtcacga 37550089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 638 - 699
Target Start/End: Original strand, 4871987 - 4872048
Alignment:
Q  638 ttatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactg 699  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  4871987 ttatcaaccacgccgcctccatgataaaacaagctcaactacaactgttcgattaactactg 4872048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 13582785 - 13582690
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aatttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 13582690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 24435964 - 24435869
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  || || |||||||||  ||| |||||||||||||| |||||||||||||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatcc-aagttgtgcaaggtagactatcaaccacgccgtctccaggataaaaca 24435869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 7805068 - 7805166
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  7805068 ggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 7805166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 14374132 - 14374230
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || ||||||| |  ||| || ||||||||||| |||||||||||||||    
T  14374132 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcagggtagactaacaaccacgccgtctccaggataaaaca 14374230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 36253826 - 36253921
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| |||||||||||||||||||||    
T  36253826 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgcctccaggataaaaca 36253921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 701
Target Start/End: Original strand, 9911128 - 9911280
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| |||||||||||||||||||||||| | ||| | |||| ||| |||||||| ||| |||||| ||  |||||||||||  | |||| || ||| ||    
T  9911128 tatctaccgaagttgttactaggttgagttaggacaatgtcgttctttttaagacattttgtggcactgttcaaaattgtgcggggcagactaccaatca 9911227  T
Q  648 cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||| ||| | |||||||||||  ||||||||| ||| || |||| |||||||    
T  9911228 cgccg-ctctaagataaaacaagttcaactacaattgtgcggttaattactgca 9911280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 671
Target Start/End: Complemental strand, 37550082 - 37550029
Alignment:
Q  618 ccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagc 671  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  37550082 ccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaacaagc 37550029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 17510058 - 17510153
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17510058 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17510153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 568 - 701
Target Start/End: Complemental strand, 13301585 - 13301454
Alignment:
Q  568 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 667  Q
    |||||||||||||||||||||||| ||||||||||   ||  |||| | ||||||||||||||||  ||| || |||||  |  ||||||||||||||||    
T  13301585 aggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccaaaattgtgcaaggtagactaacaaccgtg-tgcctccaggataaaac 13301487  T
Q  668 aagcccaactacaactgttcgattaactactgca 701  Q
     ||||| | | || |||||||||||| |||||||    
T  13301486 -agccccagttcacctgttcgattaaatactgca 13301454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 584 - 685
Target Start/End: Complemental strand, 18265588 - 18265489
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 683  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||||||  |||| ||||||||||| || | ||| |||||||| ||| || ||||||||    
T  18265588 aggtcgctctctttaagacgttttgtgacactgcctaaaattgtgcaa-tcagactatcaaccacgacgtccccatgataaaac-agctcagctacaact 18265491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 572 - 669
Target Start/End: Complemental strand, 24771452 - 24771356
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    |||||||||||||||||||| ||||||||| |||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||||||||||||||    
T  24771452 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcact-acctaagttgtgcaaggtagactaacaaccgcgccgtctccaggataaaacaa 24771356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 545
Target Start/End: Complemental strand, 12104249 - 12104205
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattct 545  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  12104249 ttgtttttgtatttccaaacagttgtatttggattttcaaattct 12104205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 42019573 - 42019668
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || |||||  |||| |||||||||||||||    
T  42019573 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgtgccgtctccaggataaaaca 42019668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 669
Target Start/End: Complemental strand, 1414155 - 1414050
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    ||||| || |||||||||| ||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||| |||    
T  1414155 ttactggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaagat 1414057  T
Q  663 aaaacaa 669  Q
    |||||||    
T  1414056 aaaacaa 1414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 572 - 613
Target Start/End: Original strand, 26709102 - 26709143
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  26709102 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 26709143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 572 - 613
Target Start/End: Original strand, 26978836 - 26978877
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  26978836 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 26978877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 17504953 - 17505048
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||| | |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| || || |||||||||||||||    
T  17504953 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgtcgtctccaggataaaaca 17505048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 608
Target Start/End: Original strand, 41853548 - 41853584
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcg 608  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41853548 tgagtcacgaccaggtcgctttctttaagacgtttcg 41853584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 613
Target Start/End: Complemental strand, 24776919 - 24776869
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||    
T  24776919 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggca 24776869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 548
Target Start/End: Original strand, 9496714 - 9496759
Alignment:
Q  503 gtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||    
T  9496714 gtttttggatttccaaaccgttatatttgaattttcaaattctatt 9496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 602
Target Start/End: Original strand, 31731540 - 31731573
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagac 602  Q
    ||||||||||||||||||||||| ||||||||||    
T  31731540 ggttgagtcacgaccaggtcgctttctttaagac 31731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 177; Significance: 6e-95; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 497 - 701
Target Start/End: Original strand, 3998 - 4202
Alignment:
Q  497 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 596  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3998 tctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 4097  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    |||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4098 taagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaacta 4197  T
Q  697 ctgca 701  Q
    |||||    
T  4198 ctgca 4202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 444101 - 443917
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||  ||||  ||||||||| |||| |||||||||||||  |||||||||||||||||||||| ||||||| | ||||             
T  444101 tgttgtttttggatttttaaactcttgtatttgtattttcaaattctattatttaccgaagttgttactaggttgaatcacgacgaagtcg--------- 444011  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
      ||||||||||||| |||| ||||||||||||| |||| |||||||||||||| ||| ||||||||||||||||| |||||||||| || |||||||    
T  444010 --acgtttcgtggcactgcc-aaaattgtgcaaggcagactatcaaccacgccgtctc-aggataaaacaagcccagctacaactgtgcggttaacta 443917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 2e-94; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 494 - 701
Target Start/End: Original strand, 3672505 - 3672712
Alignment:
Q  494 agttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctct 593  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3672505 agttttgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 3672604  T
Q  594 ctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaa 693  Q
    |||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3672605 ctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaa 3672704  T
Q  694 ctactgca 701  Q
    ||||||||    
T  3672705 ctactgca 3672712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 3692542 - 3692744
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3692542 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 3692641  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3692642 agacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactact 3692741  T
Q  699 gca 701  Q
    |||    
T  3692742 gca 3692744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 497 - 701
Target Start/End: Complemental strand, 39775899 - 39775695
Alignment:
Q  497 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 596  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  39775899 tctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgctactaggttgagtcacgaccaggtcgctctctt 39775800  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  39775799 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaacta 39775700  T
Q  697 ctgca 701  Q
    |||||    
T  39775699 ctgca 39775695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 7571387 - 7571185
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7571387 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 7571288  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  7571287 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 7571188  T
Q  699 gca 701  Q
    |||    
T  7571187 gca 7571185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 18467149 - 18467351
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18467149 tgttgtttttgaatttccaaactgatgtatttggattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 18467248  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  18467249 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaactact 18467348  T
Q  699 gca 701  Q
    |||    
T  18467349 gca 18467351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 23666292 - 23666090
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23666292 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 23666193  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||| |    
T  23666192 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaat 23666093  T
Q  699 gca 701  Q
    |||    
T  23666092 gca 23666090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 24038540 - 24038338
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24038540 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 24038441  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||| |    
T  24038440 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaat 24038341  T
Q  699 gca 701  Q
    |||    
T  24038340 gca 24038338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 8069603 - 8069805
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt-atccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8069603 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8069702  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||||    
T  8069703 aagacgtttcgtggcactgtcc-aaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactac 8069801  T
Q  698 tgca 701  Q
    ||||    
T  8069802 tgca 8069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 8883094 - 8883296
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  8883094 tgttgattttggatttccaaactgttgtatttggattttcaaattctattatctaccgaagttgttactaggtcgagtcacgaccaggtcgctctcttta 8883193  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||| || |||||||||    
T  8883194 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaacaagcccagctgcaactgtgcggttaactact 8883293  T
Q  699 gca 701  Q
    |||    
T  8883294 gca 8883296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 504 - 701
Target Start/End: Complemental strand, 758532 - 758335
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  758532 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacg 758433  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||||||||    
T  758432 tttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgca 758335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 504 - 701
Target Start/End: Original strand, 3033573 - 3033770
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3033573 tttttggatttccaaactgtagtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 3033672  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||| ||||| |||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  3033673 tttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgca 3033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 499 - 703
Target Start/End: Original strand, 18471932 - 18472135
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| ||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18471932 tgttgtttttgaatttctaaactgatgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 18472031  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
     || | ||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18472032 cgatg-ttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactact 18472130  T
Q  699 gcatt 703  Q
    |||||    
T  18472131 gcatt 18472135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 14438864 - 14438662
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  14438864 tgttgtttttggattcccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttta 14438765  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| | |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||    
T  14438764 agacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactact 14438665  T
Q  699 gca 701  Q
    |||    
T  14438664 gca 14438662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 499 - 702
Target Start/End: Original strand, 3418918 - 3419122
Alignment:
Q  499 tgttgtttttgg-atttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  3418918 tgttgtttttggtatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaagtcgctctcttt 3419017  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||| ||||| ||||||| || |||||||     
T  3419018 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcaggataaaacaagctcaactgcaactgtgcggttaactat 3419117  T
Q  698 tgcat 702  Q
    |||||    
T  3419118 tgcat 3419122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 499 - 698
Target Start/End: Original strand, 8887854 - 8888053
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8887854 tgttgattttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 8887953  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| || ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || ||||||| || |||||||||    
T  8887954 agacgttttgttgcactgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaaatccagctgcaactgtgcggttaactact 8888053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 498 - 685
Target Start/End: Original strand, 29350163 - 29350350
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  29350163 ctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctttcttt 29350262  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 685  Q
    |||||||||||||||| |||||||||||||||||| ||||  ||| |||| ||||||||||||||||||||||| |||||||||||||    
T  29350263 aagacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccaggataaaacaagctcaactacaactgt 29350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 501 - 701
Target Start/End: Complemental strand, 12966040 - 12965840
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    ||||||||| |||| ||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12966040 ttgtttttgaattttcaaaccgttgtatttgggtttccaaattctatgatctaccgaagttgttactagattgagtcacaaccaggtcgctctctttaag 12965941  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    ||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  12965940 acgttttatggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaactaatgc 12965841  T
Q  701 a 701  Q
    |    
T  12965840 a 12965840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 522 - 701
Target Start/End: Complemental strand, 32474824 - 32474647
Alignment:
Q  522 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 621  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||| |||||||    
T  32474824 gttgtttttggatttccaaattctattatctaccgaagttgttactagattgagccacgaccaggtcgctctct--aagacgtttcgtggcactgcccaa 32474727  T
Q  622 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32474726 aattgtgcaagacagactatcaaccacgccgtctccaggataaaacaagcccagctacaactgttcgattaactactgca 32474647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 502 - 701
Target Start/End: Original strand, 55431242 - 55431441
Alignment:
Q  502 tgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaga 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||| |||||||||||||||||||    
T  55431242 tgtttttggatttccaaacagttgtatttggatttccaaattctattatctgctgaagttgttattaggttgagtcacgatcaggtcgctctctttaaga 55431341  T
Q  602 cgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||| || || | |||||| |||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||    
T  55431342 cgtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactactgca 55431441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 499 - 699
Target Start/End: Original strand, 20519978 - 20520178
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||| | |||| ||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  20519978 tgttgttttcgaattttcaaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcactctcttta 20520077  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||| ||||||||||  ||| |||||||||||||||||||| ||||||||||| ||| |||||||||| || |||||||||    
T  20520078 agacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctccaagataaaacaagtccagctacaactgtgcggttaactact 20520177  T
Q  699 g 699  Q
    |    
T  20520178 g 20520178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 495 - 698
Target Start/End: Complemental strand, 49971597 - 49971394
Alignment:
Q  495 gttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  49971597 gttctcttgtttttggatttccaaactgttgtatttggatttccaagttttattatctaccgaagttgttactaggttgagtcacgaccaggtcgatctc 49971498  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 694  Q
    ||||||||||||||||||| |  ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||| || ||||||| |  |||||    
T  49971497 tttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcagttaac 49971398  T
Q  695 tact 698  Q
    ||||    
T  49971397 tact 49971394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 555 - 703
Target Start/End: Complemental strand, 12971746 - 12971598
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  12971746 cgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattgtgcaagacagattatcaatcacgccgcc 12971647  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||    
T  12971646 tctaggataaaacaagcccaactacaactgttcaattaactactgcatt 12971598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 3657409 - 3657207
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||| ||||||||| ||||| |||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||  || ||||||||||||    
T  3657409 tgttgtgtttggattttcaaactgttgtatttgaatttctaaattctattatctaccgaagttgttactatgttgagtcacgattagatcgctctcttta 3657310  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||||||| ||| |||||| ||||||||||| ||| ||||||||||| |||||||||||    
T  3657309 agacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccatgccacctccaagataaaacaagtccagctacaactgttagattaactact 3657210  T
Q  699 gca 701  Q
    |||    
T  3657209 gca 3657207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 501 - 701
Target Start/End: Original strand, 29715570 - 29715770
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  29715570 ttgtttttggatttccaaactgttgtatttagatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccagatcgctctttttaag 29715669  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    |||||||||| || || |||||||||||| ||  ||| |||||||||||||||||| ||||||||||||| ||| ||||| |||| || ||||||| |||    
T  29715670 acgtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctctaggataaaacaagtccagctacagctgtgcggttaactattgc 29715769  T
Q  701 a 701  Q
    |    
T  29715770 a 29715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 23661619 - 23661431
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||            
T  23661619 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgc-------- 23661528  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
          ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||| |    
T  23661527 ------ttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaat 23661434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 8884917 - 8885045
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  8884917 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 8885016  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  8885017 tttaaccgttccttttagagctctctaat 8885045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 499 - 681
Target Start/End: Complemental strand, 12112822 - 12112628
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 586  Q
    |||||||||| ||||| ||||| ||||||||||||||| |||||||||||            ||| |||||||||||||||||||||| ||||||| |||    
T  12112822 tgttgttttttgatttacaaaccgttgtatttggattttcaaattctattttaaaaaggaatatctaccgaagttgttactaggttgaatcacgactagg 12112723  T
Q  587 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 681  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  12112722 tcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagacagactatcaaccacaccgcctccaggataaaacaagctcaactacaa 12112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 498 - 625
Target Start/End: Original strand, 27708802 - 27708928
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  27708802 ctgttgtttttg-atttccaaactgttgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgttctcttt 27708900  T
Q  598 aagacgtttcgtggcaatgcccaaaatt 625  Q
    |||||||||||||||| |||||||||||    
T  27708901 aagacgtttcgtggcactgcccaaaatt 27708928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 18468886 - 18469014
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||| ||||||    
T  18468886 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcatcaaaggattgattaattctttatcagtacgtgcacaatatac 18468985  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||| ||||    
T  18468986 tttaaccgttccttttagagctctttaat 18469014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 23664543 - 23664415
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||| | ||||||||||||||||||    
T  23664543 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaatgctttattagtacgtgcacgatatac 23664444  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    ||||||| |||||||||||||||||||||    
T  23664443 tttaaccattccttttagagctctctaat 23664415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 3674313 - 3674442
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattc-tttgtcagtacgtgcacgatata 797  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||| ||| |||||||||||||||    
T  3674313 gcattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattcttttatcaatacgtgcacgatata 3674412  T
Q  798 ctttaaccgttccttttagagctctctaat 827  Q
    ||||||||||||||||||||||||||||||    
T  3674413 ctttaaccgttccttttagagctctctaat 3674442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 598 - 701
Target Start/End: Original strand, 27708959 - 27709062
Alignment:
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||| ||||| ||||||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||||    
T  27708959 aagacgtttcatggcactgcccaaaattatgcaaggtagactatcaaccacgccgcctccaggataaaacaagcccagcttcaactgtgcggttaactac 27709058  T
Q  698 tgca 701  Q
    ||||    
T  27709059 tgca 27709062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 555 - 699
Target Start/End: Original strand, 28125097 - 28125242
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||| |||  |||||||||||||||||| ||| |||||| | |||    
T  28125097 cgaaattgttactaggttgagtcacgaccaggttgctct-tttaagacatttcgtggcactgcttaaaattgtgcaagacagactattaaccacactgcc 28125195  T
Q  655 tccaggat--aaaacaagcccaactacaactgttcgattaactactg 699  Q
    ||||||||  ||||||||  ||||||||| ||| || | ||||||||    
T  28125196 tccaggattaaaaacaagttcaactacaattgtgcggtcaactactg 28125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 499 - 613
Target Start/End: Complemental strand, 2207876 - 2207762
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||  |||| |||||||||| ||||  ||||||||||||  | ||||||||| ||||| ||||||||||||||||||||||| ||||    
T  2207876 tgttgtttttggatttttaaactgttgtatttgaatttttaaattctattatttatcgaagttgtcactagattgagtcacgaccaggtcgctcttttta 2207777  T
Q  599 agacgtttcgtggca 613  Q
    |||||||| ||||||    
T  2207776 agacgtttagtggca 2207762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 699 - 814
Target Start/End: Complemental strand, 12970231 - 12970116
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| ||||||||||||| ||||||  |||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||| || | | | |    
T  12970231 gcattagtcccatcctattggatatgtttagtactttctttccagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgctctgc 12970132  T
Q  799 tttaaccgttcctttt 814  Q
    ||||||| ||||||||    
T  12970131 tttaaccattcctttt 12970116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 563 - 668
Target Start/End: Original strand, 26962050 - 26962154
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | | | || |||||||||  ||| || ||| ||||||| |||||||||    
T  26962050 ttactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacac-aagttgtgcaaggtagactaacaaacacgccgtctccaggat 26962148  T
Q  663 aaaaca 668  Q
    ||||||    
T  26962149 aaaaca 26962154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 13022024 - 13022122
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  13022024 ggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 13022122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 556 - 701
Target Start/End: Original strand, 20507637 - 20507779
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 655  Q
    |||||| ||||| |||| || || | ||||||| |||||||||   ||||| |||||| ||| |||||||||||||| |||| |||||||||| || |||    
T  20507637 gaagttattacttggtttaggcatggccaggtcactctcttta---cgtttggtggcactgctcaaaattgtgcaaggcagactatcaaccacaccacct 20507733  T
Q  656 ccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    | ||||||||||||| ||||| | |  ||| |||||||||||||||    
T  20507734 ctaggataaaacaagaccaacaatagttgtgcgattaactactgca 20507779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 25726897 - 25726830
Alignment:
Q  564 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaa 631  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||    
T  25726897 tactagattgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccagaattgtgcaa 25726830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 33089441 - 33089343
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | |||  | |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  33089441 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 33089343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 563 - 685
Target Start/End: Original strand, 48432398 - 48432519
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| |||||| || || ||||||||||||||||||||||| |||||| |||||||||||||| || ||||| ||||||||||| || | ||| ||    
T  48432398 ttactaggctgagtcgcggactaggtcgctctctttaagacgttttgtggcactgcccaaaattgtg-aaaacagactatcaaccacgacgtccccaaga 48432496  T
Q  662 taaaacaagcccaactacaactgt 685  Q
    |||||| |||| | ||||||||||    
T  48432497 taaaac-agcctagctacaactgt 48432519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 20090757 - 20090662
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  20090757 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 20090662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 20095882 - 20095787
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  20095882 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 20095787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 34129264 - 34129169
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34129264 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 20810369 - 20810467
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||| | |||  | |||||||||  ||| || ||||||||||| |||||||||||||||    
T  20810369 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 20810467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 53119524 - 53119622
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| | | | || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  53119524 ggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 53119622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 563 - 668
Target Start/End: Complemental strand, 48435933 - 48435828
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| || ||  |||||| ||||||| |||| ||||||||||| || | ||||||    
T  48435933 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgacactgttcaaaatagtgcaag-cagactatcaaccacgacgtccccagga 48435835  T
Q  662 taaaaca 668  Q
    |||||||    
T  48435834 taaaaca 48435828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 668
Target Start/End: Complemental strand, 15768295 - 15768191
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||| |  ||  || ||||||||  ||| || ||||| ||||| |||||||||    
T  15768295 ttactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaactgtgcaaggtagactagcaaccgcgccgtctccaggat 15768197  T
Q  663 aaaaca 668  Q
    ||||||    
T  15768196 aaaaca 15768191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 17364063 - 17364160
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaat-tgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| | || ||| | ||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17364063 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17364160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 3477041 - 3476946
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3477041 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3476946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 584 - 668
Target Start/End: Original strand, 4662196 - 4662279
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||| |||||||||| |||| ||||||||||||| |||||| |||| ||||||||| | || | |||||||||||||    
T  4662196 aggtcgctctctctaagacgtttagtggaaatgcccaaaattatgcaag-cagactatcaaccatgacgtccccaggataaaaca 4662279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 15763125 - 15763030
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  || ||||||||  ||| || ||||| ||||| |||||||||||||||    
T  15763125 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaactgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 15763030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 590 - 681
Target Start/End: Original strand, 16013724 - 16013816
Alignment:
Q  590 ctctctttaagacgtttcgtggcaat-gcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 681  Q
    ||||||||||||||||||||| || |  |  |||||||||||||| ||| |||| ||||||||||||||||||||||| |||| || ||||||    
T  16013724 ctctctttaagacgtttcgtgacactatctaaaaattgtgcaagatagactatccaccacgccgcctccaggataaaataagctcatctacaa 16013816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 17368719 - 17368814
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17368719 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17368814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 2617355 - 2617256
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||| |||| |||||| |||||||||||||||| |||| | | | |  |||||||||  ||| || ||||| |||||||||||||||||||||    
T  2617355 ggttgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccaggataaaaca 2617256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 38437089 - 38436991
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||| |||||| || ||||||||||||||||||||| |  || || ||||| |||  ||| || ||||||||||| |||||||||||||||    
T  38437089 ggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatcc-aagttgtgaaaggtagactaacaaccacgccgtctccaggataaaaca 38436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 16013644 - 16013693
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    ||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  16013644 tgttggttttggatttccaaactgttgtatttggatttccaaagtctatt 16013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 584 - 685
Target Start/End: Original strand, 16983006 - 16983105
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 683  Q
    |||||||||| ||||||||||||| || || || ||||||||||| |||| ||| |||||||||||  | | |||||||||||||| |||| ||||||||    
T  16983006 aggtcgctctttttaagacgtttcatgacactgtccaaaattgtgaaaga-agaatatcaaccacgatgtccccaggataaaacaa-cccagctacaact 16983103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 17357836 - 17357933
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaat-tgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||| | |||||||||||||||| |||| | || ||| | ||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17357836 tgagtcacgaccaggtcgatttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 563 - 668
Target Start/End: Complemental strand, 27605240 - 27605135
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||  ||| | ||| |  |||||||||  ||| || |||| || ||||||| |||||    
T  27605240 ttaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctctaggat 27605141  T
Q  663 aaaaca 668  Q
    ||||||    
T  27605140 aaaaca 27605135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 3482518 - 3482423
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||| ||||| ||| ||  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3482518 tgagtcacgaccaggtcgctttctttaagacttttcgcggc-attacctaatttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3482423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 703
Target Start/End: Complemental strand, 6596386 - 6596322
Alignment:
Q  639 tatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    ||||||||||||||||||||||||||||||||| || |||||| | |  | ||||||||||||||    
T  6596386 tatcaaccacgccgcctccaggataaaacaagctcagctacaattatgtggttaactactgcatt 6596322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 701
Target Start/End: Complemental strand, 19277031 - 19276887
Alignment:
Q  557 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctc 656  Q
    ||||||||| || ||||||| || |  ||||  |||| |||||||| ||| |||||| || | ||||||||| |||||||| |||||||||||  |||||    
T  19277031 aagttgttattaagttgagttacaataaggtttctctttttaagactttttgtggcactgtcgaaaattgtgtaagacagactatcaaccacgttgcctc 19276932  T
Q  657 caggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
     || ||||||||||| ||| || |||| | || ||| ||||||||    
T  19276931 tagaataaaacaagctcaattaaaactatgcggttagctactgca 19276887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 54270644 - 54270739
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  54270644 tgagtcacgaccaggtcgctttctttaagacatttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 54270739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 696
Target Start/End: Original strand, 55325847 - 55325897
Alignment:
Q  646 cacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    |||||||||||||||||||||||||||||  ||||||||| || |||||||    
T  55325847 cacgccgcctccaggataaaacaagcccagttacaactgtgcggttaacta 55325897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 668
Target Start/End: Complemental strand, 21494399 - 21494302
Alignment:
Q  571 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||| || ||  | || | |||||  |||||||||  ||| || ||||| ||||| |||| ||||||||||    
T  21494399 ttgagtcacgaccaggtcgctctctttaagatgtatcacgacagtacccaagtttgtgcaaggtagactaacaaccgcgccgtctccgggataaaaca 21494302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 55128790 - 55128885
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||| | |||||||||||||||| |||| |  || || ||||| |||  ||| || ||||| ||||| |||||||||||||||    
T  55128790 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcact-acctaagttgtgtaaggtagactagcaaccgcgccgtctccaggataaaaca 55128885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 613
Target Start/End: Original strand, 10321444 - 10321483
Alignment:
Q  574 agtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  10321444 agtcacgaccaggtcgctttctttaagacgtttcgcggca 10321483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 560 - 670
Target Start/End: Complemental strand, 17026213 - 17026103
Alignment:
Q  560 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccag 659  Q
    |||||| |||||| |||||||| ||  ||||||||||||||||||||  || ||  | | ||| |||||||||||||| ||||||| |||  | ||  ||    
T  17026213 ttgttaataggttaagtcacgatcaattcgctctctttaagacgttttctgacaccgtctaaatttgtgcaagacagactatcaacaacgttgtctttag 17026114  T
Q  660 gataaaacaag 670  Q
    |||||||||||    
T  17026113 gataaaacaag 17026103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 669
Target Start/End: Original strand, 46964031 - 46964109
Alignment:
Q  591 tctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    ||||||||||||||||| ||||| ||   ||||||||||||  |||| ||||| ||| ||| |||| ||||||||||||    
T  46964031 tctctttaagacgtttcatggcactgtttaaaattgtgcaatgcagactatcacccatgccacctctaggataaaacaa 46964109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 569 - 607
Target Start/End: Original strand, 53358239 - 53358277
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttc 607  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  53358239 ggttgagtcacggccaggtcgctttctttaagacgtttc 53358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 669
Target Start/End: Complemental strand, 1741153 - 1741108
Alignment:
Q  624 ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    ||||||||| || |||| ||||| ||||||||||||||||||||||    
T  1741153 ttgtgcaaggcaaattaacaaccgcgccgcctccaggataaaacaa 1741108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 668
Target Start/End: Complemental strand, 4117704 - 4117600
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    ||||| || |||||||||||||||||||| || ||||||| ||||| |||| |  || || |||||||||  ||| || ||||| ||| | |||||||||    
T  4117704 ttactggggtgagtcacgaccaggtcgctttcgttaagacatttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgctgtctccaggat 4117606  T
Q  663 aaaaca 668  Q
    ||||||    
T  4117605 aaaaca 4117600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 602
Target Start/End: Complemental strand, 10586281 - 10586248
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagac 602  Q
    ||||||||||||||||||||||| ||||||||||    
T  10586281 ggttgagtcacgaccaggtcgctttctttaagac 10586248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 613
Target Start/End: Complemental strand, 30341939 - 30341898
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    ||||||||||||||||| || |||||||||||||||| ||||    
T  30341939 tgagtcacgaccaggtcactttctttaagacgtttcgcggca 30341898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 2e-91; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 30650855 - 30651057
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  30650855 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctcttta 30650954  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  30650955 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaactact 30651054  T
Q  699 gca 701  Q
    |||    
T  30651055 gca 30651057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 9189972 - 9189770
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9189972 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttta 9189873  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9189872 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactact 9189773  T
Q  699 gca 701  Q
    |||    
T  9189772 gca 9189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 19892635 - 19892433
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19892635 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 19892536  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  19892535 agacgtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 19892436  T
Q  699 gca 701  Q
    |||    
T  19892435 gca 19892433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 9180893 - 9180691
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9180893 tgttgtttttgaatttccaaactgttgtatttggattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 9180794  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9180793 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactact 9180694  T
Q  699 gca 701  Q
    |||    
T  9180693 gca 9180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 18344357 - 18344559
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18344357 tgttgtttttggatttccaaactgttgtatttggattttcaaattctattatcaaccgaagttgttactagattgagtcacgaccaggtcgctctcttta 18344456  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  18344457 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataaaacaagcccagctacaactgttcgattaactact 18344556  T
Q  699 gca 701  Q
    |||    
T  18344557 gca 18344559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 498 - 701
Target Start/End: Complemental strand, 1935163 - 1934960
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1935163 ctgttgtttttgaattttcaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 1935064  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| || |||||||     
T  1935063 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaa 1934964  T
Q  698 tgca 701  Q
    ||||    
T  1934963 tgca 1934960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 7738020 - 7737818
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||| ||||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7738020 tgttgattttggatttctatactgttgtatttggattttcaaattctattatccaccgaagttgttactaggttgagtcacgaccatgtcgctctcttta 7737921  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  7737920 agaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccaactacaattgttcgattaactatt 7737821  T
Q  699 gca 701  Q
    |||    
T  7737820 gca 7737818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 31326665 - 31326867
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31326665 tgttgtttttggatttccaaaatgttgtaattgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31326764  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||| || || |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  31326765 agacgtttcatgccactgcccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaacaagcccaactacaactgtgcgattaactact 31326864  T
Q  699 gca 701  Q
    |||    
T  31326865 gca 31326867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 35601848 - 35602050
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  35601848 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaggttgaatcacgaccaggtcgctcttttta 35601947  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  35601948 agacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccaggataaaacaaacccagctacaattgttcgattaactact 35602047  T
Q  699 gca 701  Q
    |||    
T  35602048 gca 35602050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 35639166 - 35638964
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||| ||||    
T  35639166 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaagttgaatcacgatcaggtcgctcttttta 35639067  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  35639066 agacgtttcgtggcactgcccaaaattgtgcaagacagcgtatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 35638967  T
Q  699 gca 701  Q
    |||    
T  35638966 gca 35638964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 10160893 - 10160696
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10160893 tgttgtttttggatttccaaactcttgtatttggatttctaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 10160794  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || || ||||||| || |||||||    
T  10160793 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacta 10160696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 30658189 - 30658391
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  30658189 tgttgtttttggatttccaaactgttgtatttgcatttccaagttctattatctaccgaagttgttactatgttgagtcacgaccaggtcgctctcttta 30658288  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| | | |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||    
T  30658289 agacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactact 30658388  T
Q  699 gca 701  Q
    |||    
T  30658389 gca 30658391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 42926929 - 42926726
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  42926929 tgttgtttttggattttcaaactgtt-tatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggccgctctcttta 42926831  T
Q  599 agac--gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||  ||||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||    
T  42926830 agacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccaggataatacaagctcaactacaactgtgcggttaacta 42926731  T
Q  697 ctgca 701  Q
    |||||    
T  42926730 ctgca 42926726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 25478470 - 25478269
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||    ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  25478470 tgttgtttttggattttcaaactattgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctc 25478371  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 694  Q
    |||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||    
T  25478370 tttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaagcccagctacaactgtgcgaataac 25478271  T
Q  695 ta 696  Q
    ||    
T  25478270 ta 25478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 499 - 686
Target Start/End: Original strand, 30631505 - 30631692
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||| |||||||||    
T  30631505 tgttgtttttggatttccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgattaggtcactctcttta 30631604  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 686  Q
    | || |||||||||| |||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  30631605 aaacttttcgtggcattgccaaaaattgtgcaagaaagactatcaaccacgccacctccaggataaaacaagcccaactgcaactgtt 30631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 12796851 - 12797053
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||| || |||||||||| |||| ||||||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||    
T  12796851 tgttgtttttggatttccacactgttgtatttgaattttcaaattctattatctgccgaagttgttattaggttgagtcacgaccagatcgctctcttta 12796950  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| ||  |||||||||| || |||||||||    
T  12796951 agacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccaggataaaacaagtccggctacaactgtgcggttaactact 12797050  T
Q  699 gca 701  Q
    |||    
T  12797051 gca 12797053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 25497498 - 25497297
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaa----ttctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    ||||||||||||||||||||||  |||||||| ||||||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  25497498 tgttgtttttggatttccaaactattgtatttagatttccaaactcattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctc 25497399  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 694  Q
    |||||||||||||||  || |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  25497398 tttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaac 25497299  T
Q  695 ta 696  Q
    ||    
T  25497298 ta 25497297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 505 - 701
Target Start/End: Original strand, 28603230 - 28603431
Alignment:
Q  505 ttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 604  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28603230 ttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgt 28603329  T
Q  605 ttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacg----ccgcctccaggat-aaaacaagcccaactacaactgttcgattaactactg 699  Q
    |||||| || || |||||||||||||||||||| |||||||||||    |  |||||||||| ||||||||  || ||||||||||||||||||||||||    
T  28603330 ttcgtgacactgtccaaaattgtgcaagacagactatcaaccacgctacctacctccaggataaaaacaagttcagctacaactgttcgattaactactg 28603429  T
Q  700 ca 701  Q
    ||    
T  28603430 ca 28603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 29677308 - 29677509
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||| |||||||||||| |||| |||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||| || |||||||||||||    
T  29677308 tgttatttttggatttc-aaactgttgtatttgaattttcaaattctattatctagcgaagttgttactaggttgagtcacgatcatgtcgctctcttta 29677406  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| ||| |||||||||| || |||||||||    
T  29677407 agacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccaggataaaataagtccagctacaactgtgcggttaactact 29677506  T
Q  699 gca 701  Q
    |||    
T  29677507 gca 29677509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 29677694 - 29677895
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||    
T  29677694 tgttgtttttggatttc-aaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcgctctcatta 29677792  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||| ||| |||||| |||| ||||||||||||| || | ||||||||| ||||||| |||||||||| ||||||| |||||||||| || |||||||||    
T  29677793 agacatttagtggcactgccaaaaattgtgcaaggcaaactatcaaccaagccgcctacaggataaaaaaagcccagctacaactgtgcggttaactact 29677892  T
Q  699 gca 701  Q
    |||    
T  29677893 gca 29677895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 25483191 - 25483063
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  25483191 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 25483092  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  25483091 tttaaccgttccttttagagctctctaat 25483063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 25490797 - 25490669
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  25490797 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 25490698  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  25490697 tttaaccgttccttttagagctctctaat 25490669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 17973772 - 17973644
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  17973772 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 17973673  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  17973672 tttaaccgttccttttagagctctctaat 17973644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 30652588 - 30652716
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  30652588 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 30652687  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  30652688 tttaaccgttccttttagagctctctaat 30652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 9183839 - 9183711
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  9183839 gcattagtcccatcctcttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 9183740  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  9183739 tttaaccgttccttttagagctctctaat 9183711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 553 - 701
Target Start/End: Complemental strand, 19094610 - 19094461
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    ||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||  ||| | |||||||||||||||||| || | |||||||||| |||    
T  19094610 accgaagttgttattaggttgagtcacgatcaggtcgctctccttaaaacgttttttggtactgcccaaaattgtgcaaggcaaaatatcaaccacaccg 19094511  T
Q  653 cctccaggat-aaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||| ||||||||| || |||||||||| ||||||| |||||||    
T  19094510 cctccaggataaaaacaagctcagctacaactgtgcgattaattactgca 19094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 499 - 681
Target Start/End: Complemental strand, 19578595 - 19578401
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattct------------attatccaccgaagttgttactaggttgagtcacgaccagg 586  Q
    ||||| ||||||||||||||||  |||||||||||||| ||||||||            | |||| ||||||||||||| |||||||||||||||||||     
T  19578595 tgttggttttggatttccaaactattgtatttggattttcaaattctactttgaaagagaatatctaccgaagttgttattaggttgagtcacgaccaga 19578496  T
Q  587 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 681  Q
    |||||||||||||||||||| |||||| | || |||||||||||||  ||| ||||||||| || ||||||||| ||||||||| ||||||||||    
T  19578495 tcgctctctttaagacgttttgtggcactacctaaaattgtgcaaggaagactatcaaccatgctgcctccagggtaaaacaagtccaactacaa 19578401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 553 - 698
Target Start/End: Complemental strand, 40847710 - 40847565
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||| ||  |||| ||||||||| || | |||||||||||||     
T  40847710 accgaagttgttactagattgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggcaaactatcaaccacgcca 40847611  T
Q  653 cctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||| |||||||||||| ||||||||||||||  | |||||||||    
T  40847610 cctcctggataaaacaagtccaactacaactgtgtggttaactact 40847565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 558 - 699
Target Start/End: Complemental strand, 21523829 - 21523689
Alignment:
Q  558 agttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctcc 657  Q
    |||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||  ||| ||||||||||||||| ||     
T  21523829 agttgttaataggttgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattgtgcaagggagactatcaaccacgccgcttct 21523731  T
Q  658 aggataaaacaagcccaactacaactgttcgattaactactg 699  Q
    ||| |||||||||  || |||||||||| || ||||||||||    
T  21523730 aggttaaaacaagttcagctacaactgtgcggttaactactg 21523689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 699 - 814
Target Start/End: Original strand, 30647872 - 30647988
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattcttt-gtcagtacgtgcacgatata 797  Q
    ||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||  ||||||||  ||||||| | || ||||||    
T  30647872 gcattagtgccatcctattggatgtgtatatgacttcctttctagtaattcctttcgtcaaaggattgacgaattctttcatcagtacatacatgatata 30647971  T
Q  798 ctttaaccgttcctttt 814  Q
    |||||||||||| ||||    
T  30647972 ctttaaccgttcatttt 30647988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 499 - 586
Target Start/End: Complemental strand, 15489883 - 15489796
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccagg 586  Q
    ||||||||||||||||||||   |||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15489883 tgttgtttttggatttccaatatgttgtattagaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccagg 15489796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 696
Target Start/End: Complemental strand, 17545419 - 17545270
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct-ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 646  Q
    |||| |||||||||||||||||||||||| |||| ||||||| | | | ||||||||||||||| || |   |||| |||||||| | ||| ||||||||    
T  17545419 tatctaccgaagttgttactaggttgagttacgatcaggtcgttttttcttaagacgtttcgtgacacttttcaaagttgtgcaaaaaagactatcaacc 17545320  T
Q  647 acgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||| |||| |||||||||||||| || ||||||| || || |||||||    
T  17545319 acgccacctcgaggataaaacaagcacatctacaacagtgcggttaacta 17545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 644
Target Start/End: Original strand, 20711358 - 20711516
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccag 585  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||||||            ||| ||||||||||||||||||||||||||||||||     
T  20711358 tgttgtttttggatttacaaactgttgtattttggttttccaaattctattttttaagaaaatatctaccgaagttgttactaggttgagtcacgaccat 20711457  T
Q  586 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaa 644  Q
     || |||  ||||||| ||||||| ||| ||| ||||||||||||||||||| ||||||    
T  20711458 atcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 20711516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 42914639 - 42914737
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| |  || || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  42914639 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 42914737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 714 - 814
Target Start/End: Complemental strand, 24536424 - 24536327
Alignment:
Q  714 tattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatactttaaccgttccttt 813  Q
    ||||||||||||||| |||||||||   ||| |||||||| ||||||||||| | ||||||||  ||||||||| || ||| ||||||||||||||||||    
T  24536424 tattggatgtgtttaggactttctt---agttattccttttgtcaaaggatcaactaattcttcatcagtacgtacatgatctactttaaccgttccttt 24536328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 563 - 668
Target Start/End: Original strand, 160031 - 160136
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||  | || | ||||||||||||||||  ||  |||||||| || |||||||  |||    
T  160031 ttactaggttgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctccgagat 160130  T
Q  663 aaaaca 668  Q
    ||||||    
T  160131 aaaaca 160136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 668
Target Start/End: Original strand, 5089277 - 5089373
Alignment:
Q  571 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |  || || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  5089277 ttgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatcc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 5089373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 42723546 - 42723451
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42723546 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42723451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 42728715 - 42728620
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42728715 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42728620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 44096302 - 44096397
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  44096302 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 44096397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 44754691 - 44754596
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  44754691 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 44754596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 44759857 - 44759762
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  44759857 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 44759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 685
Target Start/End: Original strand, 14104580 - 14104701
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| || ||| ||||||||||||| ||| | ||||||||||| || | ||| ||    
T  14104580 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgtcactgctcaaaattgtgcaa-acaaactatcaaccacgacgtccccatga 14104678  T
Q  662 taaaacaagcccaactacaactgt 685  Q
    |||||| |||| | ||||||||||    
T  14104679 taaaac-agcctagctacaactgt 14104701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 563 - 668
Target Start/End: Complemental strand, 44957542 - 44957437
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| ||||||| | || |||||| |||||||||||||||| |||||| |||  ||||||||||||| |||| ||||||||||| |  ||||||||    
T  44957542 ttactaggctgagtcatggactaggtcgttctctttaagacgttttgtggcactgcaaaaaattgtgcaag-cagactatcaaccacgacatctccagga 44957444  T
Q  662 taaaaca 668  Q
    |||||||    
T  44957443 taaaaca 44957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 40518567 - 40518472
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || |||| |||||||  ||| || ||||| ||||| |||||||||||||||    
T  40518567 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaatagtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 40518472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 765
Target Start/End: Original strand, 32080735 - 32080801
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatc 765  Q
    ||||||||| ||||||||||||||||| || |||||||| | |||| |||||||| |||||||||||    
T  32080735 gcattagtctcatcctattggatgtgtgtaggactttctgtttagttattccttttgtcaaaggatc 32080801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 699 - 743
Target Start/End: Complemental strand, 3175268 - 3175224
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctag 743  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  3175268 gcattagtcccatcctattgaatgtgtttatgactttctttctag 3175224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 607
Target Start/End: Original strand, 39542900 - 39542936
Alignment:
Q  571 ttgagtcacgaccaggtcgctctctttaagacgtttc 607  Q
    ||||||||||| |||||||||||||||||||||||||    
T  39542900 ttgagtcacgatcaggtcgctctctttaagacgtttc 39542936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 40847779 - 40847735
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaatt 543  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||    
T  40847779 tgttgtttttagattttcaaactgttgtatttggatttccaaatt 40847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 681
Target Start/End: Original strand, 7734581 - 7734707
Alignment:
Q  554 ccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc 653  Q
    |||||||| ||| | |||||||||||||| ||||||||  |||| ||| |||||| | || ||  | ||||||| |||||||   ||||||||||| |||    
T  7734581 ccgaagttattattgggttgagtcacgactaggtcgcttccttttagatgtttcgcgacactg-tctaaattgtacaagacatgctatcaaccacgtcgc 7734679  T
Q  654 ctccaggataaaacaagcccaactacaa 681  Q
    ||| |||| ||||||||  |||||||||    
T  7734680 ctctaggaaaaaacaagttcaactacaa 7734707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 569 - 607
Target Start/End: Original strand, 19538382 - 19538420
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttc 607  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  19538382 ggttgagtcacgaccaggtcgctttctttaagacatttc 19538420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 602
Target Start/End: Complemental strand, 6297984 - 6297951
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagac 602  Q
    ||||||||||||||||||||||| ||||||||||    
T  6297984 ggttgagtcacgaccaggtcgctttctttaagac 6297951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 613
Target Start/End: Complemental strand, 28751824 - 28751783
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||| ||||| |||||||||| ||||    
T  28751824 tgagtcacgaccaggtcgctttcttttagacgtttcgcggca 28751783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 168; Significance: 1e-89; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 498 - 701
Target Start/End: Original strand, 7029 - 7232
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7029 ctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 7128  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||| || ||||||||    
T  7129 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactac 7228  T
Q  698 tgca 701  Q
    ||||    
T  7229 tgca 7232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 5e-89; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 31273447 - 31273649
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31273447 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31273546  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||||    
T  31273547 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgtggttaactact 31273646  T
Q  699 gca 701  Q
    |||    
T  31273647 gca 31273649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 5271586 - 5271386
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5271586 tgttgtttttggatttccaaactgtt--atttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 5271489  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |    
T  5271488 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccaactacaactgtttgattcactatt 5271389  T
Q  699 gca 701  Q
    |||    
T  5271388 gca 5271386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 37260046 - 37259844
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  37260046 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctttcttta 37259947  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| | | |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  37259946 agacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactact 37259847  T
Q  699 gca 701  Q
    |||    
T  37259846 gca 37259844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 37264733 - 37264531
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  37264733 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 37264634  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||||    
T  37264633 agacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaattgtgcggttaactact 37264534  T
Q  699 gca 701  Q
    |||    
T  37264533 gca 37264531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 497 - 701
Target Start/End: Original strand, 8693635 - 8693839
Alignment:
Q  497 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 596  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  8693635 tctgttgtttttggattttcaaactgttgtatttggatttccaaattctattgtctatcgaagttgttactaggttgagtcacgaccaggtcgctctctt 8693734  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||||||||||  | ||||||||||||||||||| | |||||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  8693735 taagacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacgccgcctcaaggataaaacaagctcagctacaactgttcgattaacta 8693834  T
Q  697 ctgca 701  Q
    |||||    
T  8693835 ctgca 8693839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 501 - 701
Target Start/End: Original strand, 31268962 - 31269162
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31268962 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 31269061  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    ||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||| ||  | |||||||||||    
T  31269062 acgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaaccgtgtggttaactactgc 31269161  T
Q  701 a 701  Q
    |    
T  31269162 a 31269162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 16420956 - 16421157
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  16420956 tgttgtttttggatttccaaactgttgtatttagatttccaa-ttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcatta 16421054  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||| || |||||||||    
T  16421055 agacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacaggataaaacaagcccagctacaactgtgcggttaactact 16421154  T
Q  699 gca 701  Q
    |||    
T  16421155 gca 16421157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 5928388 - 5928186
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| ||||||||||| |||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  5928388 tgttgtttttagatttccaaactgttgtatttggagtttcaaattctattatctaccgaagttgttaccaggttgagtcacgaccaggtcgctctcttta 5928289  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||| |||| |||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5928288 agatgtttagtggcactgctcaaaattgtgcaaggcagactatcaaccacaccgcctccaggataaaacaagcccagctgcaactgttcgattaactact 5928189  T
Q  699 gca 701  Q
    |||    
T  5928188 gca 5928186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 55251647 - 55251847
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||    
T  55251647 tgttgtttttcgatttccaaactgttgtatttggatttccaa-ttctattatctattgaagttgttactaggttgagtcacgaccaggtcgctct-ttta 55251744  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  55251745 agacgtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccaggataaaacaagcccaactacaactgtacggttaactact 55251844  T
Q  699 gca 701  Q
    |||    
T  55251845 gca 55251847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 8030645 - 8030443
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||| ||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||    
T  8030645 tgttgtttttgaattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgaatcacaatcaggtcgctctcttta 8030546  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| |||||| ||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  8030545 agacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccaggataaaacaagcccagctacaaatgttcgattaactact 8030446  T
Q  699 gca 701  Q
    |||    
T  8030445 gca 8030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 533 - 703
Target Start/End: Complemental strand, 33463491 - 33463321
Alignment:
Q  533 atttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaag 632  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  33463491 atttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaag 33463392  T
Q  633 acagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
     |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33463391 gcagattgtcaaccccgccgcctccaggataaaacaagcacaactacaactgttcgattaactactgcatt 33463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 499 - 670
Target Start/End: Complemental strand, 13522162 - 13521990
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  13522162 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 13522063  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 670  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13522062 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaag 13521990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 504 - 701
Target Start/End: Complemental strand, 33469137 - 33468940
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  33469137 tttttggatttccaaactgttgtatttggattttcaaattctattatctactgaagttgttactaggttgagtcacgactaggtcgttctctttaagacg 33469038  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||| |||||| |||||||| ||||||||| |||| | ||||||||||| |||||| |||||||||||| || |||||| |||||||||||||||||||    
T  33469037 ttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctccatgataaaacaagctcagctacaattgttcgattaactactgca 33468940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 497 - 701
Target Start/End: Original strand, 19101901 - 19102105
Alignment:
Q  497 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 596  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||||| | | |||||||||||||||| ||||||||| ||||| |||| ||    
T  19101901 tctgttgtttttggatttataaactgttgtatttggatttccaaattctattatctatcaaagttgttactaggttaagtcacgacgaggtcactctgtt 19102000  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||||||||||| | | ||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||    
T  19102001 taagacgtttcgtggcactactcaaaattgtgcaaaacagactatcaaccacgtcgcctccaggataaaacaagtccaactacaactgtgcggttaacta 19102100  T
Q  697 ctgca 701  Q
    |||||    
T  19102101 ctgca 19102105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 499 - 670
Target Start/End: Complemental strand, 12824064 - 12823893
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||    
T  12824064 tgttgttttttgatttctaaactgttgtatttggatttccaaattctattttctaccgaagttgttattaggttgagtcatgaccaggtcgctctcttta 12823965  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 670  Q
    |||| |||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12823964 agacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccaggataaaacaag 12823893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 32082259 - 32082058
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||    
T  32082259 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatcaaccgaagttgttactaggttgagtcacgaccagatcactcttttta 32082160  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||| |||| ||||| || ||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||  ||||| ||| || |||||||||    
T  32082159 agacatttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcctccaggataaaacaagctcagttacaattgtgcggttaactact 32082061  T
Q  699 gca 701  Q
    |||    
T  32082060 gca 32082058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 522 - 689
Target Start/End: Original strand, 31765831 - 31766002
Alignment:
Q  522 gttgtatttggatttccaaattctatta----tccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgc 617  Q
    ||||| ||||||||||||||||||||||    || ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||    
T  31765831 gttgtttttggatttccaaattctattaattatctaccgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtggcactgc 31765930  T
Q  618 ccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcga 689  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  31765931 ccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcga 31766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 501 - 696
Target Start/End: Original strand, 51697841 - 51698040
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 596  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||    
T  51697841 ttgtttttggattttcaaactattgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctttt 51697940  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||||| || || ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| ||| || |||||||    
T  51697941 taagacgtttcatgacactgctcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaattgtgcggttaacta 51698040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 517 - 703
Target Start/End: Original strand, 13059354 - 13059540
Alignment:
Q  517 aaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatg 616  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||    
T  13059354 aaactgttgtatttggattttcaaattctattatctaccgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttcgtggcactg 13059453  T
Q  617 cccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |  |||||||||||||||||| |||||||||| ||||||| || ||||||||||| || ||||||||||  | ||||||||||||||    
T  13059454 cataaaattgtgcaagacagactatcaaccactccgcctctagaataaaacaagctcagctacaactgtgtggttaactactgcatt 13059540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 511 - 701
Target Start/End: Original strand, 47244186 - 47244376
Alignment:
Q  511 atttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 610  Q
    ||||| |||| |||||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  47244186 atttctaaactgttgtatttggatttccaaattatattatctatcgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtg 47244285  T
Q  611 gcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||| ||  ||||||| |  |||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  47244286 gcactgttcaaaattattgaagaaagactatcaaccacgccgcctccaggataaaacaagcacaactacaactgtgcggttaactactgca 47244376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 555 - 701
Target Start/End: Complemental strand, 42758868 - 42758722
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  42758868 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcc 42758769  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||| ||||||| || ||||  |||||||| |||||||||||||||    
T  42758768 tccagaataaaactagtccaaaaacaactgtgcgattaactactgca 42758722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 499 - 669
Target Start/End: Original strand, 19106545 - 19106715
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||| ||||||    
T  19106545 tgttgtttttggattttcaaattgctgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacaagcagatcgctttcttta 19106644  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    ||||||||| | ||| |||||||||||||||||| | || ||||||||||| ||||||||| |||||||||    
T  19106645 agacgtttcatagcactgcccaaaattgtgcaaggctgactatcaaccacgtcgcctccagaataaaacaa 19106715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 516 - 700
Target Start/End: Original strand, 47574567 - 47574752
Alignment:
Q  516 caaacagttgtatttggattt-ccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaa 614  Q
    ||||| ||||||||| ||||| ||||||||||||||| |||||| |||||| ||||||||||||| | ||||||||||||||||||||||||| || ||     
T  47574567 caaactgttgtattttgattttccaaattctattatctaccgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgacac 47574666  T
Q  615 tgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    | ||||||||||||||||||| | |||||| |||||||| |||||||||||||||| ||| |||||||||| || |||||||||||    
T  47574667 tacccaaaattgtgcaagacaaaatatcaatcacgccgcatccaggataaaacaagtccagctacaactgtgcggttaactactgc 47574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 37262985 - 37262857
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    |||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||    
T  37262985 gcattagtcttatcctattagatgtgtttaggactttctttctagtaattcctttcgtcaaaggatttactaattctttatcagtacgtgcacgatatac 37262886  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    ||||| |||||||||||||||||||||||    
T  37262885 tttaatcgttccttttagagctctctaat 37262857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 699 - 824
Target Start/End: Complemental strand, 33467483 - 33467358
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    |||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  |||||||||||| | |||||    
T  33467483 gcattaatctcatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggatcaactaattcttcatcagtacgtgcatgttatac 33467384  T
Q  799 tttaaccgttccttttagagctctct 824  Q
    ||||||||||||||||||||||||||    
T  33467383 tttaaccgttccttttagagctctct 33467358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 532 - 700
Target Start/End: Original strand, 19906210 - 19906377
Alignment:
Q  532 gatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaa 631  Q
    ||||| |||||| ||||||| ||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||  ||| || || | ||||||||||||    
T  19906210 gattttcaaattttattatctaccgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgttcagtgacactgtctaaaattgtgcaa 19906309  T
Q  632 gacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    |||||| |||||||  |||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  19906310 gacagactatcaactccgccgcctccaggataaaacaagctcaactacaactgtttga-taactactgc 19906377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 701 - 830
Target Start/End: Original strand, 13061140 - 13061268
Alignment:
Q  701 attagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatactt 800  Q
    ||||||| |||||||||||||||||||| ||||||||||||| || |||||||||||||||||| || ||||||||| ||||||| |||| |||||||||    
T  13061140 attagtcccatcctattggatgtgttta-gactttctttctattatttcctttcgtcaaaggattgactaattctttatcagtacatgcatgatatactt 13061238  T
Q  801 taaccgttccttttagagctctctaattat 830  Q
    |||| |||||||||||||||||||||||||    
T  13061239 taactgttccttttagagctctctaattat 13061268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 699 - 830
Target Start/End: Original strand, 12876011 - 12876141
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||  ||||||||||||  ||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||||||| |||    
T  12876011 gcattagtcccatcccgttggatgtgttttggactttctttctagttattcctttcgtcaaaggatcaactaattctttatcagtacgtgcacgatttac 12876110  T
Q  799 tttaaccgttccttttagagctctctaattat 830  Q
    |||||||||||| |||||||||||||||||||    
T  12876111 tttaaccgttcc-tttagagctctctaattat 12876141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 48276807 - 48276616
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||| |||||||||||  |||  |||||||||||||||||||||||    ||| ||| |||||  ||||||||||| |||||| ||||||||||||||||    
T  48276807 tgttctttttggatttttaaattgttgtatttggatttccaaattc----atctacccaagtt--tactaggttgaatcacgatcaggtcgctctcttta 48276714  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| || ||| ||  |||||||||||||     | ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  48276713 agacgttttgttgcactgttcaaaattgtgcaa-----actatcaaccacgccgcctccaggataaaacaagttcagctacaactgttcgattaactact 48276619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 499 - 602
Target Start/End: Complemental strand, 32221266 - 32221163
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||  ||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  32221266 tgttgtttttggattttcaaattgttgtatttggattttcaaattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctcttta 32221167  T
Q  599 agac 602  Q
    ||||    
T  32221166 agac 32221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 31729540 - 31729354
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||| || |||||                || || ||||||||||||||||    
T  31729540 tgttgtttttggatttccaaactgctgtatttggatttccaagttctattatctactgaagt----------------catgatcaggtcgctctcttta 31729457  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| | |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||| ||| || ||||||| || |||||||||    
T  31729456 agacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactact 31729357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 560 - 703
Target Start/End: Complemental strand, 19541269 - 19541126
Alignment:
Q  560 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccag 659  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||  |||||||||| ||   |||||||| ||||||||| |||||||||||||||||  ||    
T  19541269 ttgttactaggttgagtcacgatcagatcgttctttttaagatatttcgtggcattgtttaaaattgtacaagacagactatcaaccacgccgcctatag 19541170  T
Q  660 gataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||    
T  19541169 gataaaacaagtccagctacaacagttcgattaactactgcatt 19541126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 505 - 643
Target Start/End: Original strand, 51696931 - 51697072
Alignment:
Q  505 ttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    ||||||||||||||||  |||||||||||||| |||||||    ||||||| | | || ||||||||||||||||||||||||||||||||||| |||||    
T  51696931 ttttggatttccaaacttttgtatttggattttcaaattcattctattatctatcaaa-ttgttactaggttgagtcacgaccaggtcgctctccttaag 51697029  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatca 643  Q
    ||||||| ||||| |||||||||||||||||| |||| |||||    
T  51697030 acgtttcatggcactgcccaaaattgtgcaaggcagactatca 51697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 556 - 685
Target Start/End: Original strand, 12878222 - 12878351
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 655  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |   |||||||||||||  |||| |||||| |||||| |||    
T  12878222 gaagttgttactaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacacttttcaaaattgtgcaaagcagactatcaatcacgccacct 12878321  T
Q  656 ccaggataaaacaagcccaactacaactgt 685  Q
    |||| ||||||||||  || ||||||||||    
T  12878322 ccagaataaaacaagttcagctacaactgt 12878351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 548 - 658
Target Start/End: Complemental strand, 13065888 - 13065778
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| |||  ||| |||||||||    
T  13065888 tatctaccgaagttgttactaggttgagtcacgactatgtcgctctctttaagacgtttcatggcactgcccaaagttgtgaaagggagactatcaacca 13065789  T
Q  648 cgccgcctcca 658  Q
    ||| |||||||    
T  13065788 cgcagcctcca 13065778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 699 - 814
Target Start/End: Complemental strand, 7899300 - 7899184
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattcttt-gtcagtacgtgcacgatata 797  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| || |||||||||  ||||||||| || ||||||    
T  7899300 gcatttgtcccatcctattggatgtgtttaggactttctttctagcaattcgtttcgtcaaaggattgactaattctttcatcagtacgtacaagatata 7899201  T
Q  798 ctttaaccgttcctttt 814  Q
    ||||||| |||||||||    
T  7899200 ctttaactgttcctttt 7899184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 555 - 670
Target Start/End: Original strand, 2819826 - 2819941
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| | || |||||||||||||||  ||| |||| |||| |||||     
T  2819826 cgaagttgttactagattgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctaccatgccgcg 2819925  T
Q  655 tccaggataaaacaag 670  Q
    ||||||||||||||||    
T  2819926 tccaggataaaacaag 2819941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 703 - 814
Target Start/End: Original strand, 19103653 - 19103764
Alignment:
Q  703 tagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatacttta 802  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||| | ||||||||| || ||| || ||||    
T  19103653 tagtcccatcctatttgatgtgtttaggactttctttctagtaatttctttcgtcaaaggattgactaattctgtatcagtacgtacatgatctatttta 19103752  T
Q  803 accgttcctttt 814  Q
    ||||||||||||    
T  19103753 accgttcctttt 19103764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 555 - 701
Target Start/End: Original strand, 4550980 - 4551125
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||||||||||||||||||||||| ||  |||||| ||  |||||||| |||  || || ||| |||| |||||||||||||| ||||||| ||||||||    
T  4550980 cgaagttgttactaggttgagtcatgattaggtcgttca-tttaagacattttatgccactgctcaaagttgtgcaagacagactatcaactacgccgcc 4551078  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||||||| | ||| ||||||| | |||||||||||||||    
T  4551079 tccaggataaaacaaactcaattacaactctgcgattaactactgca 4551125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 556 - 698
Target Start/End: Original strand, 12874522 - 12874664
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 655  Q
    |||||||||| ||||||||||||| | ||| ||||||||||||||||  ||||||||| || | ||||||||||||  ||||  ||||| ||||||||||    
T  12874522 gaagttgttattaggttgagtcacaatcagatcgctctctttaagacaattcgtggcactgtctaaaattgtgcaaagcagaccatcaatcacgccgcct 12874621  T
Q  656 ccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||||||||||| || ||| || ||| || |||||||||    
T  12874622 ccaggataaaacaagctcagctaaaattgtgcggttaactact 12874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 555 - 679
Target Start/End: Complemental strand, 1151411 - 1151286
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg-c 653  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||||||||| || || |  |||||||||||||||||  | |||||| ||||||| |    
T  1151411 cgaagttgttactaggttgagtcgcgatcagatcactctctttaagacgtttcatgacactatccaaaattgtgcaagactaactatcaatcacgccgcc 1151312  T
Q  654 ctccaggataaaacaagcccaactac 679  Q
    |||||| ||||||||||| |||||||    
T  1151311 ctccagtataaaacaagcacaactac 1151286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 547 - 701
Target Start/End: Original strand, 32545068 - 32545223
Alignment:
Q  547 ttatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaa-ttgtg-caagacagattatcaa 644  Q
    ||||| || |||||||||||||||||||||||||| ||||||  ||| ||||||| |||||||||||  ||| |||| ||||| ||||||||| ||||||    
T  32545068 ttatctactgaagttgttactaggttgagtcacgatcaggtcaatct-tttaagatgtttcgtggcaccgcctaaaaattgtgtcaagacagactatcaa 32545166  T
Q  645 ccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||  |  |||| |||||||||||| ||||||||| ||| ||| |||||||||||    
T  32545167 ccacgttgtatccatgataaaacaagctcaactacaattgtgcgactaactactgca 32545223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 653043 - 653138
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aatttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 653138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 563 - 666
Target Start/End: Complemental strand, 10120913 - 10120811
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||    
T  10120913 ttaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggat 10120815  T
Q  663 aaaa 666  Q
    ||||    
T  10120814 aaaa 10120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 699 - 764
Target Start/End: Original strand, 12316282 - 12316347
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggat 764  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  12316282 gcattagtcccatcctactggatgtgtttaggactttctttctagttattcctttcgtcaaaggat 12316347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 699 - 814
Target Start/End: Complemental strand, 8028753 - 8028637
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaa-ttcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatata 797  Q
    |||||| || ||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||| || || |||||| |||||| || || |||||     
T  8028753 gcattattcccatcctattggatatgtttaggtctttctttctagtaatttcctttcgtcaaaggattgactagttctttatcagtatgtacatgatatg 8028654  T
Q  798 ctttaaccgttcctttt 814  Q
     |||||| |||||||||    
T  8028653 ttttaactgttcctttt 8028637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 595 - 671
Target Start/End: Original strand, 16953107 - 16953183
Alignment:
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagc 671  Q
    ||||||||||||||||| | | |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  16953107 tttaagacgtttcgtggtactacccaaaattgtgcaaggcagactatcaaccacaacgcctccaggataaaacaagc 16953183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 562 - 698
Target Start/End: Original strand, 16947994 - 16948126
Alignment:
Q  562 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||| |||||||||| ||||| ||| |||| || |||||| ||| ||| | |||| |||||||||||||||    ||||||| |||||||||||||||    
T  16947994 gttactgggttgagtcatgaccatgtcactcttttcaagacgattcatggtactgcctaaaattgtgcaagac----tatcaactacgccgcctccagga 16948089  T
Q  662 taaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||||  ||   |||||||| ||||||||||||    
T  16948090 taaaacaagttcattgacaactgtgcgattaactact 16948126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 558
Target Start/End: Complemental strand, 55810315 - 55810257
Alignment:
Q  500 gttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaa 558  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  55810315 gttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 55810257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 584 - 669
Target Start/End: Complemental strand, 16596017 - 16595933
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||| |||| | ||||||||| || | ||||||||||||||    
T  16596017 aggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaag-cagactgtcaaccacgacgtccccaggataaaacaa 16595933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 584 - 669
Target Start/End: Original strand, 20513118 - 20513202
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| ||||||||||| ||   ||||||||||||||    
T  20513118 aggtcgctctctttaagatgtttcgtggcactgctcaaaattgtgcaag-cagactatcaaccacgacgttcccaggataaaacaa 20513202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 36354176 - 36354271
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  36354176 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 36354271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 36359294 - 36359389
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  36359294 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 36359389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 39999069 - 39999164
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  39999069 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 39999164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 40004027 - 40004122
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  40004027 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 40004122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 53797629 - 53797724
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  53797629 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 53797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 54343203 - 54343298
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||  |||||||||||  ||| || ||||| ||||| || ||||||||||||    
T  54343203 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-gaattgtgcaaggtagactagcaaccgcgccgtctacaggataaaaca 54343298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 54348357 - 54348452
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  54348357 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 54348452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 685
Target Start/End: Complemental strand, 33723025 - 33722904
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| |||||| || || ||||| ||||||||||||||||||||| || || ||||||||||||||| ||||  ||| |||||| || | ||||||    
T  33723025 ttactaggctgagtcgcggactaggtcactctctttaagacgtttcgtgacactgtccaaaattgtgcaag-cagaccatcgaccacgacgtccccagga 33722927  T
Q  662 taaaacaagcccaactacaactgt 685  Q
    |||||| |||||| ||||||||||    
T  33722926 taaaac-agcccagctacaactgt 33722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 681
Target Start/End: Complemental strand, 15020549 - 15020454
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 681  Q
    |||| ||||||||||| |||||||||| || | ||||||||||||||| ||||| ||||||||||| |||  |||||||||||| ||| |||||||||    
T  15020549 aggttgctctctttaaaacgtttcgtgacacttcccaaaattgtgcaa-acagactatcaaccacgacgctcccaggataaaac-agcacaactacaa 15020454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 565 - 634
Target Start/End: Complemental strand, 52691158 - 52691089
Alignment:
Q  565 actaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagac 634  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||| |  ||||||||||||||||||||    
T  52691158 actaggttgagtcacgatcatatcgctctctttaagacgttttgtgactctgcccaaaattgtgcaagac 52691089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 557 - 633
Target Start/End: Original strand, 6070571 - 6070647
Alignment:
Q  557 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaaga 633  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||| ||||| ||||| ||   ||||||||||||||    
T  6070571 aagttgttactagattgagtcatgaccagatcgctctctttaagatgtttcctggcattgtttaaaattgtgcaaga 6070647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 8980380 - 8980285
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  8980380 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 8980285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 8985500 - 8985405
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  8985500 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 8985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 13700510 - 13700605
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13700510 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13700605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 21299928 - 21299833
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  21299928 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 21299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 41393245 - 41393340
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  41393245 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 41393340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 51019468 - 51019373
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  51019468 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 51019373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 54991486 - 54991581
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  54991486 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 54991581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 24490028 - 24490127
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||| |||||||||||||||||||||| | || |   |||  |||||||||  ||| || ||||| |||| ||||||||||||||||    
T  24490028 ggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggataaaaca 24490127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 571 - 681
Target Start/End: Original strand, 40408196 - 40408307
Alignment:
Q  571 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattat-caaccacgccgcctccaggataaaacaa 669  Q
    |||||| ||||||||||| ||||||||||||||||| || ||| |||  ||| |||||||||| ||||||| ||| ||| |||| |  ||||||||||||    
T  40408196 ttgagttacgaccaggtcactctctttaagacgttttgtagcactgcttaaagttgtgcaagatagattatccaatcacaccgcttttaggataaaacaa 40408295  T
Q  670 gcccaactacaa 681  Q
    |  |||||||||    
T  40408296 gttcaactacaa 40408307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 13695159 - 13695254
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| ||||||||| |||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13695159 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13695254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 21305048 - 21304953
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  21305048 tgagtcacgaccaggtcgctttctttaagacttttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 21304953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 47046402 - 47046307
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||| | |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  47046402 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 47046307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 548
Target Start/End: Original strand, 23093112 - 23093155
Alignment:
Q  505 ttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    ||||||||||| |||| |||||||||||||||||||||||||||    
T  23093112 ttttggatttcaaaactgttgtatttggatttccaaattctatt 23093155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 668
Target Start/End: Complemental strand, 8083121 - 8083027
Alignment:
Q  574 agtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||| |||||||||||||||||||||||||  |||| |  ||||  | |||||||  ||| || ||||| ||||||||||| |||||||||    
T  8083121 agtcacgatcaggtcgctctctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcctccaagataaaaca 8083027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 765
Target Start/End: Complemental strand, 17681517 - 17681451
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatc 765  Q
    ||||||||| ||||||||||||||| |||  |||||||| ||| || | ||||||||||||||||||    
T  17681517 gcattagtctcatcctattggatgtattttggactttctctcttgttagtcctttcgtcaaaggatc 17681451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 547
Target Start/End: Complemental strand, 8652178 - 8652129
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttgga-tttccaaattctat 547  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  8652178 tgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8652129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 547
Target Start/End: Complemental strand, 8663985 - 8663936
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttgga-tttccaaattctat 547  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  8663985 tgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 13710669 - 13710763
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||| ||||| |||||||||||||||| |||| | || ||  |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13710669 tgagtcacgaccag-tcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13710763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 655 - 698
Target Start/End: Complemental strand, 8649643 - 8649600
Alignment:
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||||||||||||| |||||||||||| || |||||||||    
T  8649643 tccaggataaaacaagcctaactacaactgtgcggttaactact 8649600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 655 - 698
Target Start/End: Complemental strand, 8661450 - 8661407
Alignment:
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||||||||||||| |||||||||||| || |||||||||    
T  8661450 tccaggataaaacaagcctaactacaactgtgcggttaactact 8661407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Complemental strand, 10318878 - 10318839
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 608  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  10318878 ggttgagtcacgaccatgtcgctctctttaagacatttcg 10318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 699 - 765
Target Start/End: Original strand, 13687776 - 13687842
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatc 765  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| |||  | | ||||||||||||||||||    
T  13687776 gcattagtcccatcctactggatgtatttgtgactttctctctgtttagtcctttcgtcaaaggatc 13687842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 578 - 632
Target Start/End: Complemental strand, 30564504 - 30564450
Alignment:
Q  578 acgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaag 632  Q
    ||||| |||||||||||| |||||||||||| |||| | |||||| |||||||||    
T  30564504 acgactaggtcgctctctgtaagacgtttcgcggcactacccaaatttgtgcaag 30564450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 682
Target Start/End: Complemental strand, 39217490 - 39217367
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||||| | ||||||||| || |||||| ||||||    |||||||||| || || | |||||||| ||||| | | ||| |||||| |  ||    
T  39217490 cgaagttgttactggattgagtcacaacgaggtcgttctctt----acgtttcgtgacactgtctaaaattgtacaagataaactattaaccacactacc 39217395  T
Q  655 tccaggataaaacaagcccaactacaac 682  Q
    || || |||||| |||||||||||||||    
T  39217394 tctagtataaaaaaagcccaactacaac 39217367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 569 - 607
Target Start/End: Original strand, 39319628 - 39319666
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttc 607  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  39319628 ggttgagtcacgatcaggtcgctttctttaagacgtttc 39319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 12878153 - 12878202
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    |||||||||||||||||||||  ||| ||||||| || ||||||||||||    
T  12878153 tgttgtttttggatttccaaattgttatatttgggttcccaaattctatt 12878202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 602
Target Start/End: Original strand, 34560494 - 34560527
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagac 602  Q
    ||||||||||||||||||||||| ||||||||||    
T  34560494 ggttgagtcacgaccaggtcgctttctttaagac 34560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 608
Target Start/End: Original strand, 34644536 - 34644593
Alignment:
Q  551 ccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 608  Q
    ||||||||| | ||||  ||||||||||||| || |||||| ||||||||||||||||    
T  34644536 ccaccgaagatattaccgggttgagtcacgatcatgtcgctttctttaagacgtttcg 34644593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 2e-85; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 496 - 696
Target Start/End: Original strand, 33416470 - 33416670
Alignment:
Q  496 ttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct 595  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  33416470 ttctgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcggtctct 33416569  T
Q  596 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaact 695  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||    
T  33416570 ttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgtgcggttaact 33416669  T
Q  696 a 696  Q
    |    
T  33416670 a 33416670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 31450035 - 31449833
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  31450035 tgttgtttttggatttccaaagtgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31449936  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||| || |||||||||    
T  31449935 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactact 31449836  T
Q  699 gca 701  Q
    |||    
T  31449835 gca 31449833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 17025861 - 17026063
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17025861 tgttgtttttagattttcaaattgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 17025960  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||| | | |||||||||||||||||||||||    
T  17025961 agacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactact 17026060  T
Q  699 gca 701  Q
    |||    
T  17026061 gca 17026063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 17556353 - 17556555
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17556353 tgttgtttttagattttcaaattgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 17556452  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||| | | |||||||||||||||||||||||    
T  17556453 agacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactact 17556552  T
Q  699 gca 701  Q
    |||    
T  17556553 gca 17556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 18876535 - 18876334
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18876535 tgttgtttttggatttccaaactgctgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgctct-ttta 18876437  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | || |||||||||| || |||||||||    
T  18876436 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaaactcatctacaactgtgcggttaactact 18876337  T
Q  699 gca 701  Q
    |||    
T  18876336 gca 18876334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 496 - 696
Target Start/End: Complemental strand, 44926095 - 44925895
Alignment:
Q  496 ttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct 595  Q
    ||||||||||||| ||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44926095 ttctgttgttttttgatttccaaactgctgtatttggattttcaaattcttttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 44925996  T
Q  596 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaact 695  Q
    |||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  || |||||||| | || ||||||    
T  44925995 ttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaaggtcatctacaactatgcggttaact 44925896  T
Q  696 a 696  Q
    |    
T  44925895 a 44925895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 34118392 - 34118594
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||||||||   ||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  34118392 tgttgtttttggatttccaaactaatgtatttagatttccaaattctattatctactgaagttgttactaggttgagtcacgaccaggtcgctctcttta 34118491  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||| ||||| |||||||||||||||||| |||| ||||||||||| |||||  ||||||||||||||||| |||||||||| |  |||||||||    
T  34118492 agacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcctttaggataaaacaagcccagctacaactgtgctgttaactact 34118591  T
Q  699 gca 701  Q
    |||    
T  34118592 gca 34118594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 38182405 - 38182204
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||| |||  ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  38182405 tgttgtttttgaattgtcaaactgttgtatttggatttccaaattctattatctaccgaagttgttac-aggttgagtcacgaccaggtcgctctcttta 38182307  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    | ||||||||||||| | ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| |  |||||||||    
T  38182306 aaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaaccacgccgcctccaggataaaacaagcacagctacaactgtgctgttaactact 38182207  T
Q  699 gca 701  Q
    |||    
T  38182206 gca 38182204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 1911138 - 1910936
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||| |||||| |||||||| ||||||||||||||||    
T  1911138 tgttgtttttggatttccaaactgttgtatttggattttcaaattctattatctatcgaagttgttattaggttaagtcacgatcaggtcgctctcttta 1911039  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| |   |||||||||||||  |||| |||||||||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  1911038 agacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaaccacgctgcctccagtataaaacaagctcaactacaactgtgcggttaactact 1910939  T
Q  699 gca 701  Q
    |||    
T  1910938 gca 1910936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 1807398 - 1807601
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||  |||||||||| |||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  1807398 tgttgtttttggattttcaaattgttgtatttgaattttccaattctattatctaccgaagttgttactaggttgagtcacgactaggtcgctctcttta 1807497  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat-aaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||| || |||||||||||||||||| |||| |||||||||||||||||| ||||| |||||||| ||| |||||||||| || |||||||     
T  1807498 agacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaggataaaaacaagtccagctacaactgtgcggttaactag 1807597  T
Q  698 tgca 701  Q
    ||||    
T  1807598 tgca 1807601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 554 - 701
Target Start/End: Complemental strand, 40125999 - 40125852
Alignment:
Q  554 ccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc 653  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  40125999 ccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgc 40125900  T
Q  654 ctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  40125899 ctccaagataaaacaagcccagctacaactgttcgattaactactgca 40125852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 499 - 632
Target Start/End: Complemental strand, 40130855 - 40130722
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40130855 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 40130756  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaag 632  Q
    ||||||||||||||| ||||||||||||||||||    
T  40130755 agacgtttcgtggcactgcccaaaattgtgcaag 40130722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 501 - 701
Target Start/End: Complemental strand, 28559821 - 28559621
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    |||||||||||||||||||| |||||||||||||||  ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||    
T  28559821 ttgtttttggatttccaaactgttgtatttggatttataaattatattatctaccgaagttgttactaggttgagtcacgacaatgtcgctctctataag 28559722  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    ||||||||||||| || ||||||||||||||| || | |||||||||||||| || |||||||||| |||||||  || ||||||||||||||||| |||    
T  28559721 acgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccgtctgcaggataaaataagcccagttagaactgttcgattaactattgc 28559622  T
Q  701 a 701  Q
    |    
T  28559621 a 28559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 504 - 646
Target Start/End: Complemental strand, 4238479 - 4238337
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4238479 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacg 4238380  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 646  Q
    |||| ||||| |||||||||||||||||| |||| ||||||||    
T  4238379 tttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 547 - 701
Target Start/End: Original strand, 19166608 - 19166762
Alignment:
Q  547 ttatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 646  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||    
T  19166608 ttatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaacc 19166707  T
Q  647 acgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  19166708 acgccgcctccaggataaaacaagctcaactacaactgtgctgttaactactgca 19166762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 504 - 646
Target Start/End: Complemental strand, 4243218 - 4243076
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4243218 tttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacg 4243119  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 646  Q
    |||| ||||| |||||||||||||||||| |||| ||||||||    
T  4243118 tttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4243076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 555 - 701
Target Start/End: Complemental strand, 15875781 - 15875635
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  15875781 cgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcc 15875682  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||||||||| || |||||| ||| |||||||||||||||    
T  15875681 tccaggataaaacaagctcagctacaattgtacgattaactactgca 15875635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 553 - 701
Target Start/End: Complemental strand, 17953988 - 17953839
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  17953988 accgaagttgttactaggttgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccacgccg 17953889  T
Q  653 cctccaggataaaacaagcccaactac-aactgttcgattaactactgca 701  Q
    |||||| |||||||||||| || |||| ||||||  ||||||||||||||    
T  17953888 cctccaagataaaacaagctcacctacaaactgtgtgattaactactgca 17953839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 4241427 - 4241299
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||    
T  4241427 gcattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcaatacgtgcacgatatac 4241328  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  4241327 tttaaccgttccttttagagctctctaat 4241299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 545 - 701
Target Start/End: Original strand, 36683551 - 36683707
Alignment:
Q  545 tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaa 644  Q
    ||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||    
T  36683551 tattatctaccggagttgttactaggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaa 36683650  T
Q  645 ccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||| |||||||||||||||||||  || ||||| |||| |||||||||||||||    
T  36683651 ccacgctgcctccaggataaaacaaggtcagctacatctgtgcgattaactactgca 36683707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 17021934 - 17022062
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| ||||||| ||||||||||||    
T  17021934 gcattagtctcatcctattggatgtgtttatgactttctttctagcaattcttttcgtcaaaggattgactaattctttatcagtacatgcacgatatac 17022033  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    ||||||||||||||||||| |||||||||    
T  17022034 tttaaccgttccttttagaactctctaat 17022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 548 - 696
Target Start/End: Original strand, 24090602 - 24090750
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||| ||    
T  24090602 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatca 24090701  T
Q  648 cgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    || |||||||| ||||||||||||  | |||||||||| || |||||||    
T  24090702 cgtcgcctccaagataaaacaagcttatctacaactgtgcggttaacta 24090750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 699 - 827
Target Start/End: Original strand, 17552371 - 17552499
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| || |||||||||    
T  17552371 gcattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacttgtacgatatac 17552470  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    ||||||||||||||||||| |||||||||    
T  17552471 tttaaccgttccttttagatctctctaat 17552499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 2965545 - 2965758
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 586  Q
    ||||||||||||||||| |||| | |||||||| ||||||||||||||||            ||||||| || |||||||||||| ||||||||||||||    
T  2965545 tgttgtttttggatttcgaaactgctgtatttgaatttccaaattctattttgaaaagaaatatccaccaaatttgttactaggt-gagtcacgaccagg 2965643  T
Q  587 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 686  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||| | |||||||||| ||||||| ||||||||||||| ||| |||||||| |     
T  2965644 tcgctctctttaaaacgtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctctaggataaaacaagtccagctacaactatg 2965743  T
Q  687 cgattaactactgca 701  Q
    |  ||||||||||||    
T  2965744 cagttaactactgca 2965758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 548 - 703
Target Start/End: Complemental strand, 23548752 - 23548597
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||   ||||||||||||| | || |||||||||    
T  23548752 tatctaccgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttcgtggcactgtgtaaaattgtgcaaggcggactatcaacca 23548653  T
Q  648 cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    || |||||| |||||||||||||  || |||||||||  || ||||||||||||||    
T  23548652 cgtcgcctctaggataaaacaagttcagctacaactgcgcggttaactactgcatt 23548597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 499 - 674
Target Start/End: Complemental strand, 43302880 - 43302712
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| ||||||| ||||||||||| ||||||        |||||||||| |||| ||||| |||||| ||||| ||||||||    
T  43302880 tgttgtttttggattttcaaactgttgtatatggatttccaagttctat--------gaagttgttattaggctgagttacgacccggtcgttctcttta 43302789  T
Q  599 agacgtttcgtggcaatgcccaaaa-ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagccca 674  Q
    ||||||||||||||| || |||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  43302788 agacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccaggataaaacaagccca 43302712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 699 - 814
Target Start/End: Original strand, 21960132 - 21960248
Alignment:
Q  699 gcattagtcacatcctattggatgtgttt-atgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatata 797  Q
    ||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| || ||||||    
T  21960132 gcattagtctcatcctattcgatgtgttttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgatata 21960231  T
Q  798 ctttaaccgttcctttt 814  Q
    |||||||||||||||||    
T  21960232 ctttaaccgttcctttt 21960248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 699 - 814
Target Start/End: Complemental strand, 8329724 - 8329608
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattcttt-gtcagtacgtgcacgatata 797  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||  | |||||||||  ||||||||| || ||||||    
T  8329724 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaatgatttactaattctttcatcagtacgtacatgatata 8329625  T
Q  798 ctttaaccgttcctttt 814  Q
    |||||||||||||||||    
T  8329624 ctttaaccgttcctttt 8329608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 541 - 678
Target Start/End: Complemental strand, 2355586 - 2355449
Alignment:
Q  541 attctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagatta 640  Q
    ||||||||||| ||| ||||||||||||| ||||||||| ||||  || |||| |||||||||||||||| || |   ||||||||||||||||||| ||    
T  2355586 attctattatctaccaaagttgttactagattgagtcaccaccatatcactctttttaagacgtttcgtgacacttttcaaaattgtgcaagacagacta 2355487  T
Q  641 tcaaccacgccgcctccaggataaaacaagcccaacta 678  Q
    |||||||||||||||| | |||||||||| ||||||||    
T  2355486 tcaaccacgccgcctcaaagataaaacaaacccaacta 2355449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 499 - 581
Target Start/End: Original strand, 19915073 - 19915155
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacga 581  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19915073 tgttgtttttggatttacaaactgttgtatttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacga 19915155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 7902561 - 7902688
Alignment:
Q  571 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 670  Q
    |||||||||||||| |||||||||||||| | |||||||| || | |||||||||||  |||||| |||||||||||||||| ||| |||||||||||||    
T  7902561 ttgagtcacgaccaagtcgctctctttaaaatgtttcgtgacattacccaaaattgtataagacatattatcaaccacgccgtctctaggataaaacaag 7902660  T
Q  671 cccaactacaactgttcgattaactact 698  Q
     ||| | |||| ||| ||||||||||||    
T  7902661 tccatcaacaattgtgcgattaactact 7902688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 562 - 701
Target Start/End: Complemental strand, 28564927 - 28564786
Alignment:
Q  562 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagg- 660  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || || ||| ||||||||| ||||||||| ||| |||||||||| || ||||     
T  28564927 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga 28564828  T
Q  661 -ataaaacaagcccaactacaactgttcgattaactactgca 701  Q
     |||||||||||||   || ||||||||||||||||| ||||    
T  28564827 tataaaacaagcccggttagaactgttcgattaactattgca 28564786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 562 - 701
Target Start/End: Complemental strand, 28572550 - 28572409
Alignment:
Q  562 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagg- 660  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || || ||| ||||||||| ||||||||| ||| |||||||||| || ||||     
T  28572550 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga 28572451  T
Q  661 -ataaaacaagcccaactacaactgttcgattaactactgca 701  Q
     |||||||||||||   || ||||||||||||||||| ||||    
T  28572450 tataaaacaagcccggttagaactgttcgattaactattgca 28572409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 571 - 668
Target Start/End: Complemental strand, 33616823 - 33616727
Alignment:
Q  571 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  33616823 ttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 33616727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 699 - 830
Target Start/End: Original strand, 28861286 - 28861415
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacg--atat 796  Q
    ||||||||| || | |||| ||||||||||  ||||||||   ||| |||||||||||||||||||| | ||||||||  ||||||||||||||  ||||    
T  28861286 gcattagtcccaacatattagatgtgtttaatactttctt---agttattcctttcgtcaaaggatcaagtaattcttcatcagtacgtgcacgatatat 28861382  T
Q  797 actttaaccgttccttttagagctctctaattat 830  Q
    |||||||||||||| ||||||||||| |||||||    
T  28861383 actttaaccgttcc-tttagagctctgtaattat 28861415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 19430011 - 19430109
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19430011 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19430109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 19435513 - 19435611
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19435513 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19435611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 19566160 - 19566258
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19566160 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19566258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 19571662 - 19571760
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19571662 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19571760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 31030525 - 31030623
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| | || | ||| ||||| ||||||  ||| || ||||||||||| |||||||||||||||    
T  31030525 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactaccc-aaattatgcaaggtagactaacaaccacgccgtctccaggataaaaca 31030623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 553 - 668
Target Start/End: Original strand, 29220246 - 29220359
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    ||||||||||||| ||||||||||||||||  |||| ||||  ||||||||||| ||| || ||  ||||||||||||||  ||| |||||||||||| |    
T  29220246 accgaagttgttagtaggttgagtcacgactgggtcactct--ttaagacgttttgtgtcactgatcaaaattgtgcaaggtagactatcaaccacgctg 29220343  T
Q  653 cctccaggataaaaca 668  Q
    |||| |||||||||||    
T  29220344 cctcaaggataaaaca 29220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 32015700 - 32015795
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  32015700 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 32015795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 570 - 704
Target Start/End: Original strand, 17793450 - 17793584
Alignment:
Q  570 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    |||||||||| |||| |||| |||||||||||||||||  | || ||| ||||||||| |||| || | ||||||||||| |  ||||| ||||||||||    
T  17793450 gttgagtcacaaccatgtcgttctctttaagacgtttcacgacactgctcaaaattgtacaagtcaaactatcaaccacgtcatctccacgataaaacaa 17793549  T
Q  670 gcccaactacaactgttcgattaactactgcatta 704  Q
    | | |||||||||| | | ||||||| ||||||||    
T  17793550 gtctaactacaactttgctattaacttctgcatta 17793584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 584 - 669
Target Start/End: Original strand, 2469986 - 2470070
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||| |||| ||||||| ||| || | ||||||||||||||    
T  2469986 aggtcgctctctttaagacgttttgtggcactgctcaaaattgtgcaag-cagactatcaactacgacgtccccaggataaaacaa 2470070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 685
Target Start/End: Complemental strand, 4544356 - 4544235
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||||||||||  || | | ||||    
T  4544356 ttactaggctgagtcacggactaggtcgctctctttaagacgtttcatggcactgctcaaaattgtgcaag-tagactatcaaccactacgtccctagga 4544258  T
Q  662 taaaacaagcccaactacaactgt 685  Q
    |||||| || ||| ||||||||||    
T  4544257 taaaac-agtccagctacaactgt 4544235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 649
Target Start/End: Original strand, 19954262 - 19954348
Alignment:
Q  563 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacg 649  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| |||||| ||||||||||||| |||| |||| |||||||||||    
T  19954262 ttactaggttgagtcgcagactagatcgctctctttaagacgttttgtggcactgcccaaaattgtacaag-cagactatcaaccacg 19954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 615 - 701
Target Start/End: Original strand, 10933474 - 10933559
Alignment:
Q  615 tgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||||||| ||| ||  ||||||||||| |||||||| ||||||||||  ||||||||||||||  ||||||||||||||    
T  10933474 tgcccaaaattgtgccagataggctatcaaccacgtcgcctccatgataaaacaa-accaactacaactgtgtgattaactactgca 10933559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 563 - 668
Target Start/End: Original strand, 13584341 - 13584453
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgccca-------aaattgtgcaagacagattatcaaccacgccgcct 655  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| |||| | ||||       || |||||||||  ||| || ||||||||||| ||    
T  13584341 ttaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttcccaagttgtgcaaggtagactaacaaccacgccgtct 13584440  T
Q  656 ccaggataaaaca 668  Q
    |||||||||||||    
T  13584441 ccaggataaaaca 13584453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 563 - 668
Target Start/End: Original strand, 19949808 - 19949913
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| ||||||||| || | |||||||||||||||| ||||||||||| |||||||||||| ||||| |||| ||||||||| | || |  |||||    
T  19949808 ttactaggctgagtcacggactacgtcgctctctttaagaagtttcgtggcactgcccaaaattgagcaag-cagactatcaaccatgacgtcctcagga 19949906  T
Q  662 taaaaca 668  Q
    |||||||    
T  19949907 taaaaca 19949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 555 - 677
Target Start/End: Complemental strand, 24673438 - 24673316
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||||||||||||||||||||| |||| ||| ||||||| ||||| |||||||||| || ||  ||||||| ||||||| ||| ||||| ||||  | |     
T  24673438 cgaagttgttactaggttgagttacgatcagatcgctctttttaaaacgtttcgtgacactgttcaaaattatgcaagatagactatcacccacaacact 24673339  T
Q  655 tccaggataaaacaagcccaact 677  Q
    ||||  ||||||||||| |||||    
T  24673338 tccaaaataaaacaagctcaact 24673316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 701
Target Start/End: Original strand, 12820370 - 12820467
Alignment:
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||| |||| ||||||||||||  || | |||||| ||| |||||||||||||||||||||  ||  ||||||||| ||| |||||||||||    
T  12820370 tttcgtggcactgcctaaaattgtgcaaagcaaactatcaatcacaccgcctccaggataaaacaagttcaggtacaactgtgcgactaactactgca 12820467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 17955884 - 17955789
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| | |||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17955884 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17955789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 701
Target Start/End: Complemental strand, 15951585 - 15951523
Alignment:
Q  638 ttatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| |  ||||||||||||    
T  15951585 ttatcaaccacgccgcctccag-ataaaacaagcccagctacaactgtgcagttaactactgca 15951523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 584 - 678
Target Start/End: Original strand, 20072109 - 20072200
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaacta 678  Q
    ||||||||||||||||||| ||||||| || | || |||||||||||||  ||||||||||||||| || ||||| |||||||| ||||||||||    
T  20072109 aggtcgctctctttaagacatttcgtgacatttcctaaaattgtgcaag-tagattatcaaccacgacgtctcca-gataaaac-agcccaacta 20072200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 552 - 633
Target Start/End: Original strand, 5883978 - 5884058
Alignment:
Q  552 caccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaaga 633  Q
    |||| ||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||| | || |||||||||| |||||    
T  5883978 caccaaagttattactgggttgagtcacgaccaggtagctct-tttaagacgttttgtggtagtgtccaaaattgtacaaga 5884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 668
Target Start/End: Complemental strand, 21644172 - 21644081
Alignment:
Q  576 tcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  21644172 tcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgactccaggataaaaca 21644081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 669
Target Start/End: Complemental strand, 42157970 - 42157871
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||| ||| || |||||||||| ||| | |||| |  |||||||||| ||| | |||||||||| || |||| |||||||||||||||    
T  42157970 ggttgagtcacgaccaagtcactatctttaagacattttgcggcactatccaaaattgtacaa-atagattatcaatcatgccgtctccaggataaaaca 42157872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 42514469 - 42514374
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||| |||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42514469 tgagtcatgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42514374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 701
Target Start/End: Complemental strand, 43302714 - 43302658
Alignment:
Q  645 ccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||||||||||||||||||| || || |||| || ||||||||||||    
T  43302714 ccacgccgcctccaggataaaacaagcccagctgcacctgtgcggttaactactgca 43302658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 594 - 685
Target Start/End: Original strand, 34517263 - 34517351
Alignment:
Q  594 ctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 685  Q
    |||||||||||||||||||| ||  ||||||||||||||  ||| ||||||||||| |||| ||| |||||||||| | |||||||||||||    
T  34517263 ctttaagacgtttcgtggcactg-tcaaaattgtgcaag-gagactatcaaccacgacgcccccaagataaaacaa-ctcaactacaactgt 34517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 605
Target Start/End: Complemental strand, 15951618 - 15951584
Alignment:
Q  571 ttgagtcacgaccaggtcgctctctttaagacgtt 605  Q
    |||||||||||||||||||||||||||||||||||    
T  15951618 ttgagtcacgaccaggtcgctctctttaagacgtt 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 666
Target Start/End: Original strand, 24884712 - 24884805
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 666  Q
    |||||||||||||||| ||| |||||||||||||| | |||| |  || || |||||||||  ||| || ||||||||||| |||||||||||||    
T  24884712 tgagtcacgaccaggtagctttctttaagacgttttgcggcact-acctaagttgtgcaaggtagactagcaaccacgccgtctccaggataaaa 24884805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 702
Target Start/End: Original strand, 27415539 - 27415640
Alignment:
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    ||||||||||||| | || || ||||||  ||||  ||||||||||||| ||||| ||| |||||||||||  |||||||| ||| ||||||| || |||    
T  27415539 acgtttcgtggcactacctaagattgtggcagacgaattatcaaccacgtcgccttcagaataaaacaagcataactacaattgtgcgattaaatattgc 27415638  T
Q  701 at 702  Q
    ||    
T  27415639 at 27415640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 668
Target Start/End: Complemental strand, 43999334 - 43999230
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    ||||| ||||||||||||| ||||||| | ||||||| |||||||| |||| |  || ||||||||||||  ||| || ||||  ||||| |||||||||    
T  43999334 ttactgggttgagtcacgatcaggtcgttttctttaaaacgtttcgcggcact-acctaaattgtgcaaggtagactagcaactgcgccgtctccaggat 43999236  T
Q  663 aaaaca 668  Q
    ||||||    
T  43999235 aaaaca 43999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 28565330 - 28565268
Alignment:
Q  507 ttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactag 569  Q
    |||||||| ||||| ||| |||||| ||||| ||||| ||||||| | |||||||||||||||    
T  28565330 ttggattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 28572953 - 28572891
Alignment:
Q  507 ttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactag 569  Q
    |||||||| ||||| ||| |||||| ||||| ||||| ||||||| | |||||||||||||||    
T  28572953 ttggattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 564 - 602
Target Start/End: Complemental strand, 34818802 - 34818764
Alignment:
Q  564 tactaggttgagtcacgaccaggtcgctctctttaagac 602  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  34818802 tactgggttgagtcacgaccaggtcgctttctttaagac 34818764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 564 - 602
Target Start/End: Original strand, 37771703 - 37771741
Alignment:
Q  564 tactaggttgagtcacgaccaggtcgctctctttaagac 602  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  37771703 tactgggttgagtcacgaccaggtcgctttctttaagac 37771741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 613
Target Start/End: Original strand, 32010538 - 32010579
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||||| |||||||| ||||| ||||    
T  32010538 tgagtcacgaccaggtcgctctttttaagacatttcgcggca 32010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 1e-83; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 504 - 701
Target Start/End: Original strand, 4930164 - 4930361
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 603  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4930164 tttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 4930263  T
Q  604 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||| |||||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  4930264 tttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactactgca 4930361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 8268219 - 8268421
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  8268219 tgttgtttttggatttccaaactgttgtatttgcatttccaaattctattatctaccgaagttgttactatattgagtcacgaccaggtcgctctcttta 8268318  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||| |||||| || |||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  8268319 agacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccatgataaaacaagtccagctacaactgttcgattaactact 8268418  T
Q  699 gca 701  Q
    |||    
T  8268419 gca 8268421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 510 - 698
Target Start/End: Original strand, 26341136 - 26341324
Alignment:
Q  510 gatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgt 609  Q
    ||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26341136 gattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgt 26341235  T
Q  610 ggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  26341236 ggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaactact 26341324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 499 - 699
Target Start/End: Original strand, 8075975 - 8076176
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||    
T  8075975 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctactgaagttgttactgggttgagtcacgaccaggtcgctctcttt 8076074  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||    
T  8076075 aagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcgattaactac 8076174  T
Q  698 tg 699  Q
    ||    
T  8076175 tg 8076176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 501 - 701
Target Start/End: Complemental strand, 13314403 - 13314203
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  13314403 ttgtttttgggtttccaaactgttgtatttggatttccaaattctactatctaccgtagttgttactaggttgagtcacgaccagatcgctctctttaag 13314304  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    ||||||||||| | ||||||||||||||||||  ||| ||||| ||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  13314303 acgtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgtcgcctccaggataaaacaagctcagctacaactgttcaattaactactgc 13314204  T
Q  701 a 701  Q
    |    
T  13314203 a 13314203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 499 - 670
Target Start/End: Complemental strand, 9651137 - 9650965
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  9651137 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 9651038  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 670  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9651037 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaag 9650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 44423307 - 44423104
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttcc-aaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||    
T  44423307 tgttgtttttggattttcaaactgttgtatttggatttcccaaattctattatctaccaaagttgttactaggttgagtcacgatcagatcgctctcttt 44423208  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| || |||||||||| |||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||| || ||||||||    
T  44423207 aagacgtttcgtggcactgaccaaaattgttcaaggcagactatcaactacgccgcctccaggataaaacaagtccatctacaactgtgcggttaactac 44423108  T
Q  698 tgca 701  Q
    ||||    
T  44423107 tgca 44423104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 555 - 701
Target Start/End: Original strand, 4579490 - 4579636
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  4579490 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcc 4579589  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||    
T  4579590 tccaggataaaacaagtccagctacaactgtgcgattaactactgca 4579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 522 - 701
Target Start/End: Complemental strand, 44510823 - 44510644
Alignment:
Q  522 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 621  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| || ||||    
T  44510823 gttgtttttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaa 44510724  T
Q  622 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||||||| || |||||| |||||    
T  44510723 aattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacttctgca 44510644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 553 - 699
Target Start/End: Complemental strand, 23247048 - 23246902
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  23247048 accgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccg 23246949  T
Q  653 cctccaggataaaacaagcccaactacaactgttcgattaactactg 699  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||    
T  23246948 cctccaggataaaacaagctcacctacaactgtgcgattaactactg 23246902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 699 - 830
Target Start/End: Original strand, 12802955 - 12803086
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||||| ||||||||||||||||||||    
T  12802955 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcatcaaatgattgactaattctttatcagtacgtgcacgatatac 12803054  T
Q  799 tttaaccgttccttttagagctctctaattat 830  Q
    |||||||||||||||||||| |||||||||||    
T  12803055 tttaaccgttccttttagagatctctaattat 12803086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 570 - 701
Target Start/End: Original strand, 23866065 - 23866196
Alignment:
Q  570 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaa 23866164  T
Q  670 gcccaactacaactgttcgattaactactgca 701  Q
    || || || ||||||| || ||||||||||||    
T  23866165 gctcagctgcaactgtgcggttaactactgca 23866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 496 - 701
Target Start/End: Original strand, 27238164 - 27238370
Alignment:
Q  496 ttctgttgtttttggatttccaaacagttgtatttggatttc-caaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    ||||| || ||||||||||| ||||  ||||||||||||||  |||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  27238164 ttctgatgattttggatttctaaactattgtatttggatttttcaaactctattatctatggaagttgttactaggttgagtcacgaccaggtcgctctc 27238263  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 694  Q
    |||||||||||| |||||| ||| |||||||||| ||| |||| |||||| |||||||||| || ||||||||||| ||| |||||||||   | |||||    
T  27238264 tttaagacgttttgtggcactgctcaaaattgtgtaaggcagactatcaatcacgccgcctgcaagataaaacaagtccagctacaactgcgtgcttaac 27238363  T
Q  695 tactgca 701  Q
    |||||||    
T  27238364 tactgca 27238370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 502 - 651
Target Start/End: Complemental strand, 42627364 - 42627214
Alignment:
Q  502 tgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttact-aggttgagtcacgaccaggtcgctctctttaag 600  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42627364 tgtttttgaatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttacttaggttgattcacgaccaggtcgctctctttaag 42627265  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgcc 651  Q
    |||||||||||||   |||||||||||||||  |||| |||||||||||||    
T  42627264 acgtttcgtggcacaacccaaaattgtgcaaagcagactatcaaccacgcc 42627214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 10388546 - 10388334
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 586  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||||||||            ||| ||||||||||||||||||||||||||||||||||    
T  10388546 tgttgtttttagattttcaagctgttgtatttggatttccaaattctattttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccagg 10388447  T
Q  587 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 686  Q
    |||||||||||||||||||| |||||| ||||| || ||||||| || |||  |||||| ||||||||||||||||||||||| | |||||||||||||     
T  10388446 tcgctctctttaagacgttttgtggcattgccc-aagttgtgcatgataga-catcaacaacgccgcctccaggataaaacaaactcaactacaactgtg 10388349  T
Q  687 cgattaactactgca 701  Q
    |||||||||||||||    
T  10388348 cgattaactactgca 10388334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 555 - 701
Target Start/End: Complemental strand, 25543475 - 25543329
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| | |||| |||||||||||||| | | ||||||||||  ||||    
T  25543475 cgaagttgttactaggttgagtcacaatcaggtcgcactctttaagacgtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcc 25543376  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||||| | | |||||||||| || ||||||||||||    
T  25543375 tccaggataaaacaagtctagctacaactgtgcggttaactactgca 25543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 499 - 631
Target Start/End: Original strand, 30256780 - 30256912
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    ||||||||||||||||  ||||  |||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||| ||||| | ||||    
T  30256780 tgttgtttttggatttataaactattgtatttggatttgcaaattctattatctaccgaagtttttacaaggttgagtcacgaccagatcgctgttttta 30256879  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaa 631  Q
    |||| |||||||||| |||||||||||||||||    
T  30256880 agacatttcgtggcactgcccaaaattgtgcaa 30256912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 548 - 666
Target Start/End: Complemental strand, 3357752 - 3357634
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||||||| |||| |||||||||    
T  3357752 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaacca 3357653  T
Q  648 cgccgcctccaggataaaa 666  Q
    ||||| ||||| |||||||    
T  3357652 cgccgtctccatgataaaa 3357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 555 - 696
Target Start/End: Original strand, 12254061 - 12254202
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| |||| ||| ||||||||| |||| |||||| |||||||||    
T  12254061 cgaagttgttaccaggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaatcacgccgcc 12254160  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    | ||||||||||||||  || |||||||||| || |||||||    
T  12254161 tacaggataaaacaagttcagctacaactgtgcggttaacta 12254202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 21671109 - 21671323
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 586  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||            |||  | ||||||||||||||||||||||||||| |||    
T  21671109 tgttgtttttggatttccaaacaattttatttggatttccaaattctattttgaaatagaatatctgctgaagttgttactaggttgagtcacgactagg 21671208  T
Q  587 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 686  Q
     | |||||||||||| |||| |||||| |||||||| ||||||||| ||||  |||||| ||  ||| ||||| ||||||||||| || ||||||||||     
T  21671209 accctctctttaagaagtttagtggcactgcccaaagttgtgcaaggcagacaatcaacaacttcgcatccagaataaaacaagctcacctacaactgtg 21671308  T
Q  687 cgattaactactgca 701  Q
    || ||||||||||||    
T  21671309 cggttaactactgca 21671323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 557 - 701
Target Start/End: Original strand, 9008147 - 9008291
Alignment:
Q  557 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctc 656  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| || | | |||||||||||||| |||  |||||| || |  |||||    
T  9008147 aagttgttactaggttgagtcacgaccatgtccctctctttaagacgtttagtgacactactcaaaattgtgcaaggcaggctatcaatcatgaagcctc 9008246  T
Q  657 caggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||    
T  9008247 caggataaaacaagtccaactacaactgtgtgattaactactgca 9008291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 3879922 - 3880123
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactagg-ttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||| ||||||||  |||  ||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||| || |||||    
T  3879922 tgttgttcttggatttttaaattgttgtattttgatttccaaattctattttccaccgaatttgttactaggtttgagtcacgatcaggtcactttcttt 3880021  T
Q  598 aagacgtttcgtggcaatgcccaaaa-ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||| ||| || ||  ||||| ||||| |||  ||| ||||||||||||||||||||||||||   |||||| ||||||||| |  | |||||||    
T  3880022 aagacgttttgtgacactgttcaaaatttgtgtaaggaagactatcaaccacgccgcctccaggataa---aagccccactacaactatgtggttaacta 3880118  T
Q  697 ctgca 701  Q
    |||||    
T  3880119 ctgca 3880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 29150914 - 29151044
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| || ||| |||||||||||||| || | ||||||||||| ||    
T  29150914 accgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgctcaaaattgtgcaaggcaaactatcaaccacgtcg 29151013  T
Q  653 cctccaggataaaacaagcccaactacaact 683  Q
    |||||| ||||||| |||  || ||||||||    
T  29151014 cctccaagataaaataagttcagctacaact 29151044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 701
Target Start/End: Complemental strand, 26287339 - 26287112
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattat------------ccaccgaagttgttactaggttgagtcacgaccagg 586  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |            | |||||||||||||||||||||||||||||||| |    
T  26287339 tgttgtttttggatttcaaaactgttgtatttggatttccaaattctattttgaaaaataatctctaccgaagttgttactaggttgagtcacgaccatg 26287240  T
Q  587 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtg-------------caagacagattatcaaccacgccgcctccaggataaaacaagccc 673  Q
     |||| ||||||||| ||||  ||||| || |||||||||||             |||  |||| |||||||||||||||||||||||||||||||  ||    
T  26287239 ccgctttctttaagatgttttttggcattgtccaaaattgtgtaaggcagactatcaacgcagactatcaaccacgccgcctccaggataaaacaaatcc 26287140  T
Q  674 aactacaactgttcgattaactactgca 701  Q
    | |||||||||| |  ||||||||||||    
T  26287139 agctacaactgtgcagttaactactgca 26287112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 670
Target Start/End: Original strand, 16372381 - 16372491
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 655  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |  |||| || |||||||||||| |||||   ||| |||||    
T  16372381 gaagttgttactaggttgagtcacgaccaagtcgctctctttaagatgtttcgtggcact-accaagatcgtgcaagacagactatca---acgtcgcct 16372476  T
Q  656 ccaggataaaacaag 670  Q
    ||| |||||||||||    
T  16372477 ccaagataaaacaag 16372491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 24528351 - 24528449
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||| | |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  24528351 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 24528449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 703
Target Start/End: Original strand, 12799455 - 12799540
Alignment:
Q  618 ccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    ||||||||||||||| |||| ||||||||||||| | |||||||||||| ||| ||| |||||||||| || ||||||||||||||    
T  12799455 ccaaaattgtgcaaggcagactatcaaccacgccacatccaggataaaataagtccagctacaactgtgcggttaactactgcatt 12799540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 548 - 701
Target Start/End: Original strand, 15642209 - 15642362
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| ||||||||||||||    ||| ||||||| ||||||||||| ||||||||||||| || || |  ||||||||||| |||||| | ||||||| |    
T  15642209 tatctaccgaagttgttacagaattgtgtcacgatcaggtcgctctttttaagacgtttcatgacactatccaaaattgtggaagacaaactatcaacta 15642308  T
Q  648 cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    || ||||||||||| |||||| || || ||||||| |  || ||||||||||||    
T  15642309 cgtcgcctccaggacaaaacaggctcagctacaacggcacggttaactactgca 15642362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 597 - 703
Target Start/End: Complemental strand, 6591054 - 6590948
Alignment:
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    |||||||||| |||||| || | ||||||||||||| |||| ||||||||||||||||| ||||||||||||||  ||  || ||||||  |||||||||    
T  6591054 taagacgttttgtggcactgtctaaaattgtgcaaggcagactatcaaccacgccgccttcaggataaaacaagttcagttataactgtgtgattaacta 6590955  T
Q  697 ctgcatt 703  Q
    || ||||    
T  6590954 ctacatt 6590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 569 - 669
Target Start/End: Original strand, 9973459 - 9973558
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  |||  | ||||||||||| |||||||||||||||    
T  9973459 ggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatcc-aagttgtgcaaggtagacgaacaaccacgccgtctccaggataaaaca 9973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 33238002 - 33238097
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  33238002 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 33238097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 47998975 - 47999070
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  47998975 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 47999070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 703 - 776
Target Start/End: Original strand, 2596444 - 2596517
Alignment:
Q  703 tagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctt 776  Q
    ||||| ||||||||||||||| |||| ||||||||||||  ||||||||||| ||||||||| || ||||||||    
T  2596444 tagtcccatcctattggatgtttttaagactttctttctgataattcctttcatcaaaggattgactaattctt 2596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 586 - 647
Target Start/End: Complemental strand, 29478236 - 29478176
Alignment:
Q  586 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  29478236 gtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaa-acagactatcaacca 29478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 2234725 - 2234630
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||| ||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  2234725 tgagtcacgaccaggttgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 2234630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 16539507 - 16539412
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  16539507 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 16539412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 16626155 - 16626250
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  16626155 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 16626250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 32212749 - 32212654
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||| | |||||||||||||||    
T  32212749 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgctgtctccaggataaaaca 32212654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 33243179 - 33243274
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  33243179 tgagtcacgaccaggtcactctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 33243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 42571945 - 42572040
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42571945 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 47993800 - 47993895
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||| |||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  47993800 tgagtcacaaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 47993895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 701
Target Start/End: Original strand, 30258166 - 30258228
Alignment:
Q  639 tatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||| || || ||||||||||||    
T  30258166 tatcaatcacgccgcctccaggataaaacaagtccagctacaacagtgcggttaactactgca 30258228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 574 - 668
Target Start/End: Original strand, 33226416 - 33226509
Alignment:
Q  574 agtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||| |||| |  || || || ||||||  ||| || ||||||||||| | |||||||||||||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctaagttatgcaaggtagactaacaaccacgccgtcaccaggataaaaca 33226509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 814
Target Start/End: Complemental strand, 10391516 - 10391404
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    |||| |||| ||||||||||||||||||||  ||||||||   ||| |||||||||||||||||||| | || |||||  ||||||| | || ||| | |    
T  10391516 gcatcagtctcatcctattggatgtgtttagaactttctt---agttattcctttcgtcaaaggatcaattagttcttcatcagtacatacatgatcttc 10391420  T
Q  799 tttaaccgttcctttt 814  Q
    |||||| |||||||||    
T  10391419 tttaactgttcctttt 10391404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 596 - 685
Target Start/End: Complemental strand, 13142973 - 13142884
Alignment:
Q  596 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 685  Q
    |||||||||||||||||| |   |||| ||||||| |||||| | ||||| |||||||| |||||||||||||||  || ||||||||||    
T  13142973 ttaagacgtttcgtggcactagtcaaagttgtgcatgacagactttcaacaacgccgccaccaggataaaacaagttcagctacaactgt 13142884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 21081136 - 21081039
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaat-tgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| | || ||| | ||||||||  ||| || ||||| | ||| |||||||||||||||    
T  21081136 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcaccgtctccaggataaaaca 21081039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 665
Target Start/End: Complemental strand, 28292600 - 28292506
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaa 665  Q
    |||| |||||||||||||||||||| |||||||||||||| |||| |  ||||  |||||||||  ||| || ||||||||||| ||||||||||||    
T  28292600 ggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaa 28292506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 47177214 - 47177119
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| || ||||||||||||    
T  47177214 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtcttcaggataaaaca 47177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 563 - 665
Target Start/End: Complemental strand, 6898461 - 6898359
Alignment:
Q  563 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| |||||| || || || ||||||||||||||| |||| |||||| || ||||||||||||||| |||| ||||||||||  || | ||||||    
T  6898461 ttactaggctgagtcgcggactagatcgctctctttaagatgttttgtggcactgtccaaaattgtgcaag-cagactatcaaccacaacgtccccagga 6898363  T
Q  662 taaa 665  Q
    ||||    
T  6898362 taaa 6898359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 586 - 666
Target Start/End: Original strand, 3284740 - 3284820
Alignment:
Q  586 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 666  Q
    |||||||||||||||| ||||||||  | ||  |||| |||||||||||||| |||||||||| ||| || || |||||||    
T  3284740 gtcgctctctttaagatgtttcgtgctactgttcaaacttgtgcaagacagactatcaaccacaccgtcttcatgataaaa 3284820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 12934397 - 12934492
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |  ||  | |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  12934397 tgagtcacgaccaggtcgctttctttaagacatttcgcggcact-acctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 12934492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 17495403 - 17495498
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| | |||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||| |||||||||    
T  17495403 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaaca 17495498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 17557811 - 17557716
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| | |||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||| |||||||||    
T  17557811 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaaca 17557716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 43892858 - 43892953
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||  |||| |  || || |||||||||  | | || ||||| ||||| |||||||||||||||    
T  43892858 tgagtcacgaccaggtcgctttctttaagacgtttcacggcact-acctaagttgtgcaaggtaaactagcaaccgcgccgtctccaggataaaaca 43892953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 667
Target Start/End: Complemental strand, 1289416 - 1289334
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 667  Q
    ||||||||||||||||||||||| ||| || | | ||||||| |||||| |||| ||||||||||  ||||| || ||||||||    
T  1289416 aggtcgctctctttaagacgttttgtgacactactcaaaattatgcaag-cagactatcaaccacaacgccttcaagataaaac 1289334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 699 - 741
Target Start/End: Original strand, 15976804 - 15976846
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttct 741  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||    
T  15976804 gcattagtctcattctattggatgtgtttaagactttctttct 15976846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 613
Target Start/End: Complemental strand, 22857782 - 22857741
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||| ||||||||| |||||||||||||||| ||||    
T  22857782 tgagtcacgatcaggtcgctttctttaagacgtttcgcggca 22857741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 602
Target Start/End: Original strand, 27256239 - 27256272
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagac 602  Q
    ||||||||||||||||||||||| ||||||||||    
T  27256239 ggttgagtcacgaccaggtcgctttctttaagac 27256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 3e-78; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 494 - 701
Target Start/End: Complemental strand, 2700281 - 2700073
Alignment:
Q  494 agttctgttgtttttggatttccaaacagtt-gtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctc 592  Q
    |||| ||||||||||| |||| ||||| ||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  2700281 agttttgttgtttttgaattttcaaaccgttagtatttggattttcaaattctactatctaccgaagttgttactaggttgagtcacgaccagatcgctc 2700182  T
Q  593 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgatta 692  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2700181 tctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccacgccgcttccaggataaaacaagcccaactacaactgttcgatta 2700082  T
Q  693 actactgca 701  Q
    |||||||||    
T  2700081 actactgca 2700073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 499 - 698
Target Start/End: Complemental strand, 6408029 - 6407830
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    
T  6408029 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctcttga 6407930  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||||||||| ||||||||||||| |||  |||| ||||||||||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  6407929 agacgtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 6407830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 501 - 698
Target Start/End: Original strand, 12688899 - 12689096
Alignment:
Q  501 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 600  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12688899 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcatgaccaggtcactctctttaag 12688998  T
Q  601 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||| |||  | |||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| || |||||||||| || |||||||||    
T  12688999 acgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtctccaggataaaacaagctcagctacaactgtgcggttaactact 12689096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 511 - 698
Target Start/End: Complemental strand, 11570906 - 11570719
Alignment:
Q  511 atttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 610  Q
    |||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11570906 attttcaaactgttgtatttggatttcgaaattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtg 11570807  T
Q  611 gcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| || |||||||||| || | |||||||    
T  11570806 gcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggtgaactact 11570719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 8747708 - 8747910
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  8747708 tgttgtttttggatttacaaactgttgtatttggatttccaaattctattatctattgaagttgttactaggttgagtcacgaccaggtcgctctcttta 8747807  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||| |||| || ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| || || ||||| |  | |||||||||    
T  8747808 agacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaacgccgcctccaggataaaacaagctcagctgcaactatgtggttaactact 8747907  T
Q  699 gca 701  Q
    |||    
T  8747908 gca 8747910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 498 - 703
Target Start/End: Complemental strand, 33687773 - 33687568
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| | ||||| |||||| |||||| |||||||||| || |||||||||||||||||    
T  33687773 ctgttgtttttggatttccaaactgttgtatttggatttttaaattttgttatctaccgaaattgttattaggttgagttaccaccaggtcgctctcttt 33687674  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||| |||| |||||||||||||||| | ||||||||||||| || ||||||||    
T  33687673 aagacgtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccaggataaaacaaactcaactacaactgtgcggttaactac 33687574  T
Q  698 tgcatt 703  Q
    ||||||    
T  33687573 tgcatt 33687568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 21308960 - 21309159
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||||||||||||| |||||   |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||  ||||||||||||    
T  21308960 tgttgtttttggattttcaaac---tgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcactaccatatcgctctcttta 21309056  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||||| ||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  21309057 agacgtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 21309156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 498 - 645
Target Start/End: Original strand, 19674238 - 19674385
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  19674238 ctgttgtttttggattttcaaactgttgtatttggattttcaaattctattatttaccgaagttgttactaggttgagtcacgaccaggtcactctcttt 19674337  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaac 645  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  19674338 aagacgtttcatggcactgcccaaaattgtgcaagacagactatcaac 19674385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 699 - 827
Target Start/End: Complemental strand, 16834583 - 16834455
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  16834583 gcattagtcccatcctattggatgtgtttaggactttctttctagcaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 16834484  T
Q  799 tttaaccgttccttttagagctctctaat 827  Q
    |||||||||||||||||||||||||||||    
T  16834483 tttaaccgttccttttagagctctctaat 16834455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 522 - 703
Target Start/End: Original strand, 14508933 - 14509114
Alignment:
Q  522 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 621  Q
    ||||| ||| ||||| |||||||||||||| ||| ||||||||| |||| ||| | | || || ||||||||||| ||||||||||||| || ||  |||    
T  14508933 gttgtctttagattttcaaattctattatctaccaaagttgttattaggatgatttatgatcatgtcgctctcttcaagacgtttcgtgtcactgttcaa 14509032  T
Q  622 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||    
T  14509033 aattgtgcaagacagattatcaaccacgccgcttccaagataaaacaagctcatctacaactgttcgattaactactgcatt 14509114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 555 - 703
Target Start/End: Complemental strand, 24589277 - 24589129
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||| || |  |||||||||||||||| ||| |||||||||||||| |    
T  24589277 cgaagttgttactaagttgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccacgccgtc 24589178  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||||    
T  24589177 tccaggataaaacaagtccaactacaactgtgcggttaactactgcatt 24589129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 498 - 610
Target Start/End: Complemental strand, 11534848 - 11534736
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  11534848 ctgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttt 11534749  T
Q  598 aagacgtttcgtg 610  Q
    |||||||||||||    
T  11534748 aagacgtttcgtg 11534736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 498 - 610
Target Start/End: Complemental strand, 11560358 - 11560246
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  11560358 ctgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttt 11560259  T
Q  598 aagacgtttcgtg 610  Q
    |||||||||||||    
T  11560258 aagacgtttcgtg 11560246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 555 - 703
Target Start/End: Complemental strand, 29892374 - 29892226
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||| |||||| ||||||||||||||||||||| | |||||||||| || ||    
T  29892374 cgaagttgttactaggttgagtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattgtgcaagacaaactatcaaccacacctcc 29892275  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |||||||||||||||| ||| ||||||||||  | ||||||| ||||||    
T  29892274 tccaggataaaacaagtccagctacaactgtgtggttaactattgcatt 29892226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 505 - 637
Target Start/End: Original strand, 11427975 - 11428108
Alignment:
Q  505 ttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 604  Q
    ||||||||||||||||  |||||||||||||| |||||| ||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  11427975 ttttggatttccaaactattgtatttggattttcaaattttattatttaccgaagttgttattagattgagtcacgaccaggtcgctctctttaagacgt 11428074  T
Q  605 ttcgtggcaatgcccaaaa-ttgtgcaagacaga 637  Q
    ||||||||| ||||||||| ||||||||| ||||    
T  11428075 ttcgtggcactgcccaaaagttgtgcaaggcaga 11428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 553 - 701
Target Start/End: Complemental strand, 12406468 - 12406320
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||  ||| |||||| |||||||    
T  12406468 accgaagttgttactagattgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgccg 12406369  T
Q  653 cctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||| || ||||||||| || |||||||||||||  | ||||||||||||    
T  12406368 ccttcatgataaaacatgctcaactacaactgtgtggttaactactgca 12406320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 557 - 701
Target Start/End: Complemental strand, 20748395 - 20748251
Alignment:
Q  557 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctc 656  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| | || ||||||||||||||| | || ||||||||||||||||||    
T  20748395 aagttgttactaggttgagtcacgaccaggtcgccctctttaacatgtttcatggtactgtccaaaattgtgcaaggccgactatcaaccacgccgcctc 20748296  T
Q  657 caggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||| |||||||||| ||| |||||||||| || ||||||||||||    
T  20748295 cagaataaaacaagtccatctacaactgtgcggttaactactgca 20748251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 25316739 - 25316535
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    ||||||||||| ||||||||||  || |||||||||||||||||||    ||||||| |||||| |||||||||| ||||||| ||||||||||||||      
T  25316739 tgttgtttttgaatttccaaactattatatttggatttccaaattcattctattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaa 25316640  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc---ctccaggataaaacaagcccaactacaactgttcgatt 691  Q
    |||||||||||| |||||| |||||||||||||||||  || | ||| |||||||||||   |||||||||||||||||  || ||||||| || || ||    
T  25316639 tttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgccgtctccaggataaaacaagttcatctacaaccgtgcggtt 25316540  T
Q  692 aacta 696  Q
    |||||    
T  25316539 aacta 25316535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 26204233 - 26204029
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 594  Q
    ||||||||||| ||||||||||  || |||||||||||||||||||    ||||||| |||||| |||||||||| ||||||| ||||||||||||||      
T  26204233 tgttgtttttgaatttccaaactattatatttggatttccaaattcattctattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaa 26204134  T
Q  595 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc---ctccaggataaaacaagcccaactacaactgttcgatt 691  Q
    |||||||||||| |||||| |||||||||||||||||  || | ||| |||||||||||   |||||||||||||||||  || ||||||| || || ||    
T  26204133 tttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgccgtctccaggataaaacaagttcatctacaaccgtgcggtt 26204034  T
Q  692 aacta 696  Q
    |||||    
T  26204033 aacta 26204029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 553 - 701
Target Start/End: Complemental strand, 13736793 - 13736645
Alignment:
Q  553 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 652  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||| |||| |||||||||||||  ||| || ||||||| | |    
T  13736793 accgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacactg 13736694  T
Q  653 cctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||||||||||| || |||||| ||| ||| |||||||||||    
T  13736693 cctccaggataaaacaagcacatctacaaatgtgcgaataactactgca 13736645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 555 - 701
Target Start/End: Complemental strand, 11614205 - 11614059
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    |||||||||||||||||||||||||||  |||| | ||||||||| ||||||  ||||| ||| |||||||||||||| |||| ||||||||||||||||    
T  11614205 cgaagttgttactaggttgagtcacgatgaggttgttctctttaaaacgttttatggcactgctcaaaattgtgcaaggcagactatcaaccacgccgcc 11614106  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||||||||| ||| ||||| ||| || ||||||| ||||    
T  11614105 tccaggataaaacaagcacaattacaattgtgcggttaactaatgca 11614059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 593 - 685
Target Start/End: Complemental strand, 16836231 - 16836139
Alignment:
Q  593 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 685  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgt 16836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 593 - 701
Target Start/End: Complemental strand, 17964634 - 17964526
Alignment:
Q  593 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgatta 692  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || |||    
T  17964634 tctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggtta 17964535  T
Q  693 actactgca 701  Q
    |||||||||    
T  17964534 actactgca 17964526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 700 - 830
Target Start/End: Complemental strand, 12797191 - 12797062
Alignment:
Q  700 cattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatact 799  Q
    |||||||| |||||  ||||||||||||| ||||||||| ||||| ||||||||| |||||||||| | ||| ||||| | ||||| || ||||| ||||    
T  12797191 cattagtctcatcccgttggatgtgtttaggactttcttactagttattcctttcatcaaaggatcaactaagtctttatgagtacatgtacgatttact 12797092  T
Q  800 ttaaccgttccttttagagctctctaattat 830  Q
    ||||||||||| |||||||||||||||||||    
T  12797091 ttaaccgttcc-tttagagctctctaattat 12797062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 559 - 703
Target Start/End: Complemental strand, 22695380 - 22695236
Alignment:
Q  559 gttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctcca 658  Q
    ||||||||||||||||| |||||  | || ||||||||||| |||||||||| || ||| ||||||||||||||||| |  ||||| ||| |||||||||    
T  22695380 gttgttactaggttgagacacgattatgttgctctctttaacacgtttcgtgacattgctcaaaattgtgcaagacatacaatcaatcacaccgcctcca 22695281  T
Q  659 ggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
     |||||||||||  || |||||||||| || ||||| ||||||||    
T  22695280 cgataaaacaagtacagctacaactgtgcggttaaccactgcatt 22695236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 502 - 564
Target Start/End: Complemental strand, 17964696 - 17964634
Alignment:
Q  502 tgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgtt 564  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17964696 tgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgtt 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 19478145 - 19478243
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||||| |||||||||    
T  19478145 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccacgataaaaca 19478243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 569 - 666
Target Start/End: Original strand, 3901909 - 3902006
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 666  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |  ||||  |||||||||  ||| || ||||| |||||||||||||||||||    
T  3901909 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccaggataaaa 3902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 555 - 701
Target Start/End: Original strand, 22609556 - 22609696
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaa-ttgtgcaagacagattatcaaccacgccgc 653  Q
    ||||||||||| |||||| ||||||||||||       ||||||||||||||||||| | |||| |||| ||||| |||| | | |||||  ||||||||    
T  22609556 cgaagttgttattaggttaagtcacgaccag-------tctttaagacgtttcgtggtactgcctaaaaattgtggaagataaactatcagtcacgccgc 22609648  T
Q  654 ctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||||||||| ||||||||||||   ||||||| ||||||    
T  22609649 ctccaggataaaacaagctcaactacaactgcgtgattaacaactgca 22609696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 668
Target Start/End: Complemental strand, 12183100 - 12183000
Alignment:
Q  568 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 667  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||  ||||||||   ||| || ||||| || ||||||||| |||||||    
T  12183100 aggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataaaac 12183001  T
Q  668 a 668  Q
    |    
T  12183000 a 12183000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 13605190 - 13605092
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||| |||| |||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  13605190 ggttgagtcacgactaggttgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 13605092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 584 - 649
Target Start/End: Original strand, 35129640 - 35129704
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacg 649  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||    
T  35129640 aggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaag-cagactatcaaccacg 35129704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 22698338 - 22698243
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  22698338 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 22698243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 31981560 - 31981655
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  31981560 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 31981655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 34142080 - 34142175
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| ||||||||||||||||||||  | ||| || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34142080 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctaccc-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34142175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 34154696 - 34154791
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| ||||||||||||||||||||  | ||| || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34154696 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctaccc-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34154791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 644 - 703
Target Start/End: Complemental strand, 11534735 - 11534676
Alignment:
Q  644 accacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||    
T  11534735 accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcatt 11534676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 644 - 703
Target Start/End: Complemental strand, 11560245 - 11560186
Alignment:
Q  644 accacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||    
T  11560245 accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcatt 11560186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 496 - 683
Target Start/End: Complemental strand, 2760427 - 2760240
Alignment:
Q  496 ttctgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattat------------ccaccgaagttgttactaggttgagtcacgac 582  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| |||| |            | | |||||||||||||||||| ||| |||||    
T  2760427 ttctgttgtttttggatttccaaacagttgtattttggttttccaaattgtattttgttagagaataactagcgaagttgttactaggttaagttacgac 2760328  T
Q  583 caggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaac 682  Q
    ||||||| ||||||||| |||||| |||||          ||| |||||| |||| |||||||||   ||||||||||||||||||||| ||| ||||||    
T  2760327 caggtcgttctctttaaaacgttttgtggc----------attatgcaaggcagactatcaacca---cgcctccaggataaaacaagctcaaatacaac 2760241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 592 - 681
Target Start/End: Complemental strand, 32815138 - 32815051
Alignment:
Q  592 ctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 681  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||| | || |||| ||||||| |||||| ||||||    
T  32815138 ctctttaagacgtttcgcggcactgcccaaaattgtgcaag-cagactatcaaccacgacacccccagtataaaac-agcccagctacaa 32815051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 668
Target Start/End: Complemental strand, 5601072 - 5600972
Alignment:
Q  568 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 667  Q
    |||||||||||||||||||||||| |||||||||||||||| | || | ||| |  ||||| |||  ||| || ||||| ||||||||||| ||||||||    
T  5601072 aggttgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctccaagataaaac 5600973  T
Q  668 a 668  Q
    |    
T  5600972 a 5600972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 557 - 701
Target Start/End: Complemental strand, 9751920 - 9751775
Alignment:
Q  557 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaa--ttgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||| |||||||||||||||||  || |||||||||||||||| ||| |||||| | |||||||  |||||||||    | |||||| |||| || |    
T  9751920 aagttgtcactaggttgagtcacgaatag-tcgctctctttaagacattttgtggcactacccaaaaaattgtgcaaggggaactatcaatcacgtcgtc 9751822  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |  ||||||||| ||| | |||||||| ||| |||||||||||||||    
T  9751821 tgtaggataaaataagtctaactacaattgtgcgattaactactgca 9751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 10642706 - 10642805
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||| | |||||| ||||||||||||||||||||| |  || |  |||||||||  ||| || ||||| |||||||||| ||||||||||    
T  10642706 ggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcccggataaaaca 10642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 701 - 814
Target Start/End: Complemental strand, 19992828 - 19992718
Alignment:
Q  701 attagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatactt 800  Q
    ||||||| ||||| |||||||||||||| |||||||||   | | |||||||| ||||||||||| ||||||||||  ||||||||| |  ||| || ||    
T  19992828 attagtcccatccaattggatgtgtttaggactttctt---aattattccttttgtcaaaggatcaaataattcttcatcagtacgtacttgatctaatt 19992732  T
Q  801 taaccgttcctttt 814  Q
    || |||||||||||    
T  19992731 tacccgttcctttt 19992718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 2882867 - 2882821
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 602  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  2882867 gaagttgttactaggttgagtcacgaccatatcgctctctttaagac 2882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 21396699 - 21396794
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||  |||||||||||||||    
T  21396699 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccatctccaggataaaaca 21396794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 24192575 - 24192480
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  ||  | |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  24192575 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 24192480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 29491332 - 29491237
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||| |||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  29491332 tgagtcacgaccaagtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 29491237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 34375919 - 34376014
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||| ||||||||| |||||||||||||||| |||| |  || || ||||||||   |||||| ||||| ||||| |||||||||||||||    
T  34375919 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaacgtagattagcaaccgcgccgtctccaggataaaaca 34376014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 2863564 - 2863518
Alignment:
Q  556 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 602  Q
    |||||||||||||||||||||||| | || |||||||||||||||||    
T  2863564 gaagttgttactaggttgagtcactatcatgtcgctctctttaagac 2863518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 607
Target Start/End: Complemental strand, 11956800 - 11956762
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttc 607  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11956800 ggttgagtcatgaccaggtcgctctctttaagacgtttc 11956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 696
Target Start/End: Original strand, 12851809 - 12851937
Alignment:
Q  570 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat--aaaac 667  Q
    ||||||||||||||| | ||||||   ||||| |||||| | || |||||||||||||||||| || | ||||||||| ||| | || |||||  ||||     
T  12851809 gttgagtcacgaccaagacgctcttcataagatgtttcgcgccactgcccaaaattgtgcaaggcaaactatcaaccatgccacttctaggataaaaaaa 12851908  T
Q  668 aagcccaactacaactgttcgattaacta 696  Q
    ||| | |||||||| ||| ||||||||||    
T  12851909 aagtctaactacaattgtgcgattaacta 12851937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 572 - 613
Target Start/End: Original strand, 21401755 - 21401796
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  21401755 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 21401796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 22609481 - 22609530
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    ||||| |||||||||||| |||  ||||||||||||||||||||||||||    
T  22609481 tgttggttttggatttccgaactattgtatttggatttccaaattctatt 22609530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 572 - 613
Target Start/End: Complemental strand, 24191478 - 24191437
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  24191478 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 24191437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 584 - 630
Target Start/End: Original strand, 14041703 - 14041749
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgca 630  Q
    |||||||||||||||| |||||||||| || |||| |||||||||||    
T  14041703 aggtcgctctctttaaaacgtttcgtgacactgcctaaaattgtgca 14041749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 701
Target Start/End: Complemental strand, 4157413 - 4157336
Alignment:
Q  624 ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    |||||||||||| | | |||||||| | ||||| |||||||||||| | || ||||||| || || ||||||||||||    
T  4157413 ttgtgcaagacatactttcaaccacactgcctctaggataaaacaaactcagctacaacggtgcggttaactactgca 4157336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 605
Target Start/End: Complemental strand, 6728430 - 6728397
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtt 605  Q
    |||||||||||||||||||| |||||||||||||    
T  6728430 tgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 545
Target Start/End: Complemental strand, 13736855 - 13736814
Alignment:
Q  504 tttttggatttccaaacagttgtatttggatttccaaattct 545  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  13736855 tttttggatttccaaaactttgtatttggatttccaaattct 13736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 499 - 548
Target Start/End: Complemental strand, 15991878 - 15991829
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    ||||| ||||||| |||||||  |||||||||| ||||||||||||||||    
T  15991878 tgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 499 - 548
Target Start/End: Complemental strand, 15999540 - 15999491
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 548  Q
    ||||| ||||||| |||||||  |||||||||| ||||||||||||||||    
T  15999540 tgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15999491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 741
Target Start/End: Complemental strand, 22693873 - 22693832
Alignment:
Q  700 cattagtcacatcctattggatgtgtttatgactttctttct 741  Q
    ||||||||  || |||||||||||||||||||||||||||||    
T  22693873 cattagtctaatactattggatgtgtttatgactttctttct 22693832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 669
Target Start/End: Complemental strand, 31990955 - 31990898
Alignment:
Q  612 caatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 669  Q
    |||||| |||| |||||||||  | ||||||||||||| |||||||| ||||||||||    
T  31990955 caatgctcaaagttgtgcaaggaatattatcaaccacgacgcctccacgataaaacaa 31990898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 498 - 701
Target Start/End: Complemental strand, 166257 - 166053
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 596  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||| || || |||||| ||| |||||||||||||||| ||||||||||||||||    
T  166257 ctgttgtttttggatttccaaactgttgtattttggttttccaaattctgttttctaccgaaattgatactaggttgagtcacaaccaggtcgctctctt 166158  T
Q  597 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 696  Q
    ||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||| || |||| ||    
T  166157 taagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaatta 166058  T
Q  697 ctgca 701  Q
    |||||    
T  166057 ctgca 166053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 499 - 698
Target Start/End: Original strand, 25325 - 25524
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||||| ||||||||| ||||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |  ||||| |||||||||    
T  25325 tgttgtctttggattttcaaactgctgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacaattaggtcactctcttta 25424  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    ||||||| |||| || |||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  25425 agacgttacgtgacactgcgtaaaattgtgcaagacagactatcaaccacgccgcgtccaggataaaacaagcccaactacaactgtgcggttaactact 25524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 703
Target Start/End: Original strand, 29209 - 29285
Alignment:
Q  626 gtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 703  Q
    |||||||||| | |||||||||||||| || |||||||||| ||| | ||||| |||||| || ||||||||||||||    
T  29209 gtgcaagaca-actatcaaccacgccgtcttcaggataaaataagtctaactataactgtgcggttaactactgcatt 29285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 123; Significance: 9e-63; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 35560 - 35762
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 598  Q
    |||| |||||| |||| ||||| |||||||||||||||||||||||||||||  || ||||||||||||||||| ||| ||||||| | |||||||||||    
T  35560 tgttatttttgcattttcaaactgttgtatttggatttccaaattctattatttactgaagttgttactaggttaagttacgaccatgccgctctcttta 35659  T
Q  599 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 698  Q
    |||||||||||| || || ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||| || |||||||||    
T  35660 agacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactact 35759  T
Q  699 gca 701  Q
    |||    
T  35760 gca 35762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 120; Significance: 6e-61; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 499 - 701
Target Start/End: Original strand, 82991 - 83194
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 597  Q
    ||||||||||||||||| |||| ||||||||| || |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  82991 tgttgtttttggatttctaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 83090  T
Q  598 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 697  Q
    ||||||||||||| ||   ||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||| || || ||||||| || ||||||||    
T  83091 aagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccaggataaaacaagctcagctgcaactgtgcggttaactac 83190  T
Q  698 tgca 701  Q
    ||||    
T  83191 tgca 83194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 548 - 679
Target Start/End: Original strand, 3966 - 4097
Alignment:
Q  548 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 647  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||  |||||||||| ||| || ||||||||| |  ||||||||    
T  3966 tatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaagactttttatggcaatgccaaaatttttgcaagacataccatcaacca 4065  T
Q  648 cgccgcctccaggataaaacaagcccaactac 679  Q
    ||||||||||||||||||||||||||||||||    
T  4066 cgccgcctccaggataaaacaagcccaactac 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 498 - 685
Target Start/End: Original strand, 282 - 483
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctatt-----------atccaccgaagttgt---tactaggttgagtcacgacc 583  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||||| ||           ||| |||||||||||   |||||||||||||||||||     
T  282 ctgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgact 381  T
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 683  Q
    | |||||| | ||||||||||||| ||||| || ||||| |||||||||||| | ||||||||||| ||||||||||||||||||||| || ||||||||    
T  382 atgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataaaacaagctcagctacaact 481  T
Q  684 gt 685  Q
    ||    
T  482 gt 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 498 - 685
Target Start/End: Complemental strand, 165213 - 165012
Alignment:
Q  498 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctatt-----------atccaccgaagttgt---tactaggttgagtcacgacc 583  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||||| ||           ||| |||||||||||   |||||||||||||||||||     
T  165213 ctgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgact 165114  T
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 683  Q
    | |||||| | ||||||||||||| ||||| || ||||| |||||||||||| | ||||||||||| ||||||||||||||||||||| || ||||||||    
T  165113 atgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataaaacaagctcagctacaact 165014  T
Q  684 gt 685  Q
    ||    
T  165013 gt 165012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 560 - 701
Target Start/End: Original strand, 255804 - 255945
Alignment:
Q  560 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccag 659  Q
    ||||||||| ||| || |||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||| | ||||||| | |||||||||||    
T  255804 ttgttactatgttaagacacgaccaggtcactctctttaagaggtttcgtggcactacccaaaattgtgcaagacatactatcaactatgccgcctccag 255903  T
Q  660 gataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    ||||||||||| ||| ||||||||||  | ||||||||||||    
T  255904 gataaaacaagtccagctacaactgtgtggttaactactgca 255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 699 - 814
Target Start/End: Complemental strand, 48303 - 48187
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattcttt-gtcagtacgtgcacgatata 797  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||  ||||||||| || ||||||    
T  48303 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattgtttcatcagtacgtacatgatata 48204  T
Q  798 ctttaaccgttcctttt 814  Q
    |||||||||||||||||    
T  48203 ctttaaccgttcctttt 48187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 699 - 814
Target Start/End: Original strand, 150330 - 150446
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattcttt-gtcagtacgtgcacgatata 797  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||  ||||||||| || ||||||    
T  150330 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattgtttcatcagtacgtacatgatata 150429  T
Q  798 ctttaaccgttcctttt 814  Q
    |||||||||||||||||    
T  150430 ctttaaccgttcctttt 150446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 699 - 814
Target Start/End: Complemental strand, 212716 - 212600
Alignment:
Q  699 gcattagtcacatcctattggatgtgttt-atgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatata 797  Q
    ||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| || ||||||    
T  212716 gcattagtctcatcctattcgatgtgttttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgatata 212617  T
Q  798 ctttaaccgttcctttt 814  Q
    |||||||||||||||||    
T  212616 ctttaaccgttcctttt 212600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 702 - 814
Target Start/End: Complemental strand, 51255 - 51146
Alignment:
Q  702 ttagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatacttt 801  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||  ||| | ||| || ||||||||||    
T  51255 ttagtcacatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctt--tca-tccgtacatgatatacttt 51159  T
Q  802 aaccgttcctttt 814  Q
    |||||||||||||    
T  51158 aaccgttcctttt 51146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 563 - 668
Target Start/End: Original strand, 37001 - 37105
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 662  Q
    ||||| || |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||    
T  37001 ttactggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggat 37099  T
Q  663 aaaaca 668  Q
    ||||||    
T  37100 aaaaca 37105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 555 - 701
Target Start/End: Original strand, 2291 - 2436
Alignment:
Q  555 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 654  Q
    ||||||||||| |||||||||||| || ||||||| ||||||||| |||||| ||| || ||   |||||||||||||||||| ||||||||||||||||    
T  2291 cgaagttgttattaggttgagtcatgatcaggtcgttctctttaatacgttttgtgccattgtttaaaattgtgcaagacaga-tatcaaccacgccgcc 2389  T
Q  655 tccaggataaaacaagcccaactacaactgttcgattaactactgca 701  Q
    || || ||||||||| | ||  |||||||||  ||||||||||||||    
T  2390 tctagtataaaacaaactcaggtacaactgtgagattaactactgca 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 699 - 800
Target Start/End: Original strand, 60155 - 60256
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattcttt-gtcagtacgtgcacgatata 797  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||  ||||||||| || ||||||    
T  60155 gcattagtc-catcctattggatgtgtttaggactttctttctagttattcctttcgtcaaaggattgactaattctttcatcagtacgtacatgatata 60253  T
Q  798 ctt 800  Q
    |||    
T  60254 ctt 60256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 699 - 800
Target Start/End: Original strand, 64357 - 64458
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattcttt-gtcagtacgtgcacgatata 797  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||  ||||||||| || ||||||    
T  64357 gcattagtc-catcctattggatgtgtttaggactttctttctagttattcctttcgtcaaaggattgactaattctttcatcagtacgtacatgatata 64455  T
Q  798 ctt 800  Q
    |||    
T  64456 ctt 64458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 814
Target Start/End: Original strand, 21482 - 21597
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||  | ||||||||| ||||||| | || ||| |||    
T  21482 gcattagtcccatcctaatggatgtgtttaggactttctttctagtaattcattttgtcaaaggattaactaattctttatcagtacatacatgatctac 21581  T
Q  799 tttaaccgttcctttt 814  Q
    || ||||||| |||||    
T  21582 ttcaaccgtttctttt 21597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 563 - 685
Target Start/End: Complemental strand, 171820 - 171700
Alignment:
Q  563 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 661  Q
    |||||||| |||||| | ||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||| || | | ||||    
T  171820 ttactaggctgagtcgcagactaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaag-cagactatcaaccacgacgtc-ctagga 171723  T
Q  662 taaaacaagcccaactacaactgt 685  Q
    |||||| |||||||||||||||||    
T  171722 taaaac-agcccaactacaactgt 171700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 644
Target Start/End: Original strand, 15197 - 15355
Alignment:
Q  499 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccag 585  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||||||            ||| ||||||||||||||||||||||||||||||||     
T  15197 tgttgtttttggatttacaaactgttgtattttggttttccaaattctattttttaagaaaatatctaccgaagttgttactaggttgagtcacgaccat 15296  T
Q  586 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaa 644  Q
     || |||  ||||||| ||||||| ||| ||| ||||||||||||||||||| ||||||    
T  15297 atcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 15355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 2870 - 2772
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||| ||||||||||||||||||| || | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  2870 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 2772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Complemental strand, 10830 - 10732
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||||| ||||||||||||||||||| || | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  10830 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 1562 - 1660
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  1562 ggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 1660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 569 - 668
Target Start/End: Original strand, 7043 - 7141
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||| |||||||||||| |||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  7043 ggttgagttacgaccaggtcgttctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 7141  T

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Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 700
Target Start/End: Complemental strand, 155544 - 155486
Alignment:
Q  642 caaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 700  Q
    ||||||||||||||| |||||||||||||  || |||||||||| ||||||||||||||    
T  155544 caaccacgccgcctctaggataaaacaagttcagctacaactgtgcgattaactactgc 155486  T

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Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 611
Target Start/End: Complemental strand, 155587 - 155552
Alignment:
Q  576 tcacgaccaggtcgctctctttaagacgtttcgtgg 611  Q
    |||||||||||||| |||||||||||||||||||||    
T  155587 tcacgaccaggtcgttctctttaagacgtttcgtgg 155552  T

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Target: scaffold0128 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 566 - 698
Target Start/End: Original strand, 13265 - 13397
Alignment:
Q  566 ctaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaa 665  Q
    |||||| ||||| ||| || ||| || |||||||||||||| ||| || ||||||||||||| ||||  ||| ||||||||| |  ||||||| |||| |    
T  13265 ctaggtggagtcccgatcaagtcactttctttaagacgtttggtgacactgcccaaaattgttcaaggtagactatcaaccatggtgcctccaagataca 13364  T
Q  666 acaagcccaactacaactgttcgattaactact 698  Q
    |||||  ||||||||||||| || |||||||||    
T  13365 acaagttcaactacaactgtgcggttaactact 13397  T

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Target: scaffold0055 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 3058 - 3153
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3058 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3153  T

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Target: scaffold0052 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 81477 - 81382
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  81477 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 81382  T

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Target: scaffold0690 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 814
Target Start/End: Original strand, 6854 - 6966
Alignment:
Q  699 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggatcgaataattctttgtcagtacgtgcacgatatac 798  Q
    ||||||||| ||| | |||||||||||||| |||||| ||   ||| |||||||||||||||||||| | ||||||||  ||| ||||| || |||||||    
T  6854 gcattagtctcattccattggatgtgtttaggactttgtt---agttattcctttcgtcaaaggatcaattaattcttcatcattacgtacatgatatac 6950  T
Q  799 tttaaccgttcctttt 814  Q
    ||||  ||||||||||    
T  6951 tttattcgttcctttt 6966  T

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Target: scaffold0594 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 9303 - 9208
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  9303 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggaagactagcaaccgcgccgtctccaggataaaaca 9208  T

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Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Complemental strand, 13835 - 13740
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13835 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13740  T

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Target: scaffold0166; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 563 - 613
Target Start/End: Complemental strand, 19302 - 19252
Alignment:
Q  563 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||    
T  19302 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggca 19252  T

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Target: scaffold0067 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 569 - 613
Target Start/End: Complemental strand, 34067 - 34023
Alignment:
Q  569 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 613  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  34067 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggca 34023  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 31545 - 31640
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  31545 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 31640  T

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Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 26373 - 26468
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    ||||| |||| || ||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  26373 tgagttacgatcaagtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 26468  T

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Target: scaffold0517 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 668
Target Start/End: Original strand, 3563 - 3658
Alignment:
Q  572 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 668  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| |||||  ||||||||||||||    
T  3563 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaaca 3658  T

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Target: scaffold1050 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 701
Target Start/End: Original strand, 1151 - 1268
Alignment:
Q  584 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 683  Q
    |||| ||||| |||||||||||  ||| || ||| ||||||| |||||| | || ||| |||||||| |||||||||  ||||||||  || |||| |||    
T  1151 aggttgctctatttaagacgttctgtgacattgcacaaaattatgcaaggcggactataaaccacgctgcctccaggcaaaaacaagttcagctacgact 1250  T
Q  684 gttcgattaactactgca 701  Q
    || || ||||||||||||    
T  1251 gtgcggttaactactgca 1268  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 564 - 602
Target Start/End: Complemental strand, 1329 - 1291
Alignment:
Q  564 tactaggttgagtcacgaccaggtcgctctctttaagac 602  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  1329 tactgggttgagtcacgaccaggtcgctttctttaagac 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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