View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5554_high_1 (Length: 730)

Name: NF5554_high_1
Description: NF5554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5554_high_1
NF5554_high_1
[»] chr6 (62 HSPs)
chr6 (28-382)||(4999967-5000332)
chr6 (375-714)||(5000457-5000794)
chr6 (477-659)||(16766643-16766825)
chr6 (477-659)||(10339056-10339239)
chr6 (489-659)||(5970051-5970215)
chr6 (477-659)||(9107301-9107483)
chr6 (477-659)||(18367783-18367964)
chr6 (477-643)||(9629345-9629511)
chr6 (477-641)||(34073280-34073442)
chr6 (478-545)||(32978842-32978909)
chr6 (477-659)||(10294053-10294235)
chr6 (488-659)||(8713931-8714097)
chr6 (542-659)||(9027124-9027241)
chr6 (477-545)||(24645530-24645598)
chr6 (477-545)||(28152147-28152215)
chr6 (477-640)||(31384885-31385047)
chr6 (553-640)||(30866151-30866238)
chr6 (477-603)||(7248360-7248486)
chr6 (541-659)||(10888969-10889087)
chr6 (484-640)||(3398584-3398733)
chr6 (477-641)||(13360315-13360467)
chr6 (477-641)||(34595098-34595251)
chr6 (477-545)||(4877992-4878059)
chr6 (477-625)||(17435179-17435327)
chr6 (547-618)||(19040339-19040410)
chr6 (547-649)||(5732511-5732613)
chr6 (472-621)||(7265530-7265668)
chr6 (548-630)||(9658854-9658936)
chr6 (475-642)||(11352322-11352491)
chr6 (477-587)||(16488521-16488631)
chr6 (476-606)||(26562688-26562818)
chr6 (512-625)||(4040446-4040559)
chr6 (562-659)||(7938062-7938159)
chr6 (505-606)||(8931561-8931662)
chr6 (553-642)||(13851699-13851788)
chr6 (562-642)||(7977846-7977926)
chr6 (526-622)||(9195734-9195830)
chr6 (513-625)||(25038038-25038150)
chr6 (477-545)||(28715344-28715412)
chr6 (477-642)||(1532201-1532365)
chr6 (477-659)||(8776910-8777086)
chr6 (581-659)||(21395342-21395420)
chr6 (479-561)||(23130405-23130487)
chr6 (562-659)||(8805588-8805685)
chr6 (570-659)||(32299221-32299310)
chr6 (576-640)||(853889-853953)
chr6 (477-545)||(6898223-6898291)
chr6 (542-610)||(9025490-9025558)
chr6 (545-597)||(11784215-11784267)
chr6 (477-545)||(13364647-13364715)
chr6 (478-552)||(8389411-8389485)
chr6 (506-616)||(32313393-32313504)
chr6 (477-523)||(9027238-9027284)
chr6 (488-546)||(23771626-23771684)
chr6 (562-632)||(31579241-31579311)
chr6 (477-523)||(31959221-31959267)
chr6 (478-523)||(9025448-9025493)
chr6 (497-598)||(9522898-9522999)
chr6 (477-530)||(12236723-12236776)
chr6 (576-625)||(20371140-20371189)
chr6 (497-566)||(21223717-21223786)
chr6 (488-541)||(24831861-24831914)
[»] chr8 (51 HSPs)
chr8 (477-659)||(22651922-22652104)
chr8 (477-659)||(29510235-29510417)
chr8 (477-659)||(24362132-24362315)
chr8 (477-640)||(11944630-11944793)
chr8 (506-659)||(2572016-2572169)
chr8 (477-632)||(8343289-8343444)
chr8 (477-648)||(11803216-11803387)
chr8 (477-622)||(15816060-15816205)
chr8 (477-582)||(29447467-29447572)
chr8 (477-613)||(29447041-29447177)
chr8 (495-545)||(44462155-44462205)
chr8 (495-545)||(44469688-44469738)
chr8 (480-605)||(12570669-12570793)
chr8 (562-659)||(37283826-37283923)
chr8 (476-659)||(926729-926901)
chr8 (480-659)||(22197676-22197855)
chr8 (477-640)||(4673356-4673519)
chr8 (520-642)||(28384967-28385090)
chr8 (479-545)||(5813641-5813707)
chr8 (497-543)||(31557047-31557093)
chr8 (480-605)||(12570443-12570567)
chr8 (553-622)||(34897068-34897137)
chr8 (570-638)||(13436988-13437056)
chr8 (481-545)||(33405330-33405394)
chr8 (570-625)||(36934650-36934705)
chr8 (479-597)||(4122182-4122300)
chr8 (477-523)||(8343038-8343084)
chr8 (477-551)||(12402617-12402691)
chr8 (488-534)||(22943302-22943348)
chr8 (477-587)||(26902106-26902216)
chr8 (475-659)||(44067462-44067646)
chr8 (477-622)||(6065588-6065733)
chr8 (477-546)||(14134747-14134816)
chr8 (476-545)||(20679336-20679405)
chr8 (553-634)||(27213518-27213599)
chr8 (477-545)||(3951478-3951546)
chr8 (546-598)||(14134706-14134758)
chr8 (477-556)||(27067233-27067310)
chr8 (530-625)||(29776016-29776109)
chr8 (477-541)||(36450696-36450760)
chr8 (481-544)||(38079049-38079112)
chr8 (608-659)||(43737875-43737926)
chr8 (483-545)||(126295-126357)
chr8 (525-611)||(4611528-4611614)
chr8 (562-640)||(25192363-25192441)
chr8 (481-523)||(40064033-40064075)
chr8 (477-545)||(17751704-17751773)
chr8 (477-545)||(17760691-17760760)
chr8 (568-605)||(18067956-18067993)
chr8 (477-534)||(18407779-18407836)
chr8 (590-659)||(24413604-24413673)
[»] chr1 (72 HSPs)
chr1 (477-606)||(9828043-9828172)
chr1 (477-642)||(40917714-40917877)
chr1 (477-606)||(25361885-25362010)
chr1 (477-659)||(1486646-1486822)
chr1 (502-613)||(9629856-9629967)
chr1 (477-659)||(47989444-47989625)
chr1 (495-659)||(38503266-38503428)
chr1 (477-638)||(5944248-5944411)
chr1 (477-659)||(31694641-31694823)
chr1 (562-659)||(398781-398878)
chr1 (480-632)||(5898211-5898352)
chr1 (562-659)||(34298382-34298479)
chr1 (477-625)||(6414933-6415080)
chr1 (513-625)||(16252853-16252965)
chr1 (488-659)||(6612113-6612284)
chr1 (542-637)||(20157346-20157441)
chr1 (505-616)||(27471525-27471636)
chr1 (546-659)||(2896121-2896234)
chr1 (477-545)||(22515829-22515897)
chr1 (477-545)||(40258875-40258943)
chr1 (477-556)||(6427513-6427592)
chr1 (477-605)||(34371714-34371843)
chr1 (568-642)||(15641052-15641126)
chr1 (491-545)||(43492450-43492504)
chr1 (542-659)||(7918207-7918324)
chr1 (498-616)||(17831485-17831601)
chr1 (524-601)||(44482234-44482311)
chr1 (489-545)||(1815306-1815362)
chr1 (477-653)||(17754263-17754439)
chr1 (477-545)||(38078603-38078671)
chr1 (475-545)||(29163321-29163391)
chr1 (488-597)||(16164257-16164366)
chr1 (562-659)||(37055872-37055968)
chr1 (476-545)||(42359390-42359459)
chr1 (498-543)||(52284764-52284809)
chr1 (477-529)||(9690215-9690267)
chr1 (477-625)||(18556387-18556535)
chr1 (508-606)||(26238078-26238172)
chr1 (477-545)||(46348325-46348393)
chr1 (477-545)||(51410074-51410142)
chr1 (571-658)||(9709767-9709854)
chr1 (529-640)||(10572572-10572683)
chr1 (477-632)||(36905970-36906124)
chr1 (562-640)||(1262849-1262927)
chr1 (477-519)||(22881569-22881611)
chr1 (477-587)||(25934634-25934744)
chr1 (477-523)||(29144322-29144368)
chr1 (562-616)||(36878450-36878504)
chr1 (477-523)||(46940750-46940796)
chr1 (562-623)||(12443476-12443537)
chr1 (562-659)||(16297299-16297396)
chr1 (568-629)||(16812519-16812580)
chr1 (477-530)||(17778617-17778670)
chr1 (488-545)||(18190061-18190118)
chr1 (477-541)||(34741899-34741963)
chr1 (529-633)||(5376483-5376587)
chr1 (477-556)||(15765795-15765875)
chr1 (477-541)||(16297223-16297287)
chr1 (477-541)||(33202956-33203020)
chr1 (489-623)||(40181855-40181976)
chr1 (476-619)||(48147967-48148111)
chr1 (527-602)||(21038086-21038161)
chr1 (570-632)||(6427323-6427385)
chr1 (577-659)||(10577766-10577848)
chr1 (562-659)||(13011231-13011329)
chr1 (554-604)||(28674801-28674851)
chr1 (477-523)||(52903317-52903363)
chr1 (568-625)||(2851002-2851058)
chr1 (477-534)||(12919005-12919062)
chr1 (477-566)||(17408730-17408819)
chr1 (472-545)||(19637817-19637890)
chr1 (477-546)||(27965942-27966011)
[»] chr7 (59 HSPs)
chr7 (477-616)||(32308109-32308248)
chr7 (477-640)||(24339607-24339770)
chr7 (477-642)||(598171-598325)
chr7 (548-659)||(17851377-17851488)
chr7 (477-659)||(1433400-1433576)
chr7 (518-659)||(26329354-26329495)
chr7 (477-659)||(5409773-5409949)
chr7 (498-641)||(19206014-19206157)
chr7 (477-639)||(43027406-43027562)
chr7 (477-659)||(9778454-9778622)
chr7 (477-606)||(7438705-7438834)
chr7 (477-598)||(11665371-11665492)
chr7 (474-599)||(26033389-26033514)
chr7 (477-545)||(15680858-15680926)
chr7 (477-545)||(21880201-21880269)
chr7 (477-545)||(33994261-33994329)
chr7 (477-552)||(21831828-21831903)
chr7 (562-637)||(26733272-26733347)
chr7 (562-640)||(27945006-27945084)
chr7 (542-659)||(5235932-5236049)
chr7 (476-616)||(9408264-9408404)
chr7 (569-641)||(11722121-11722193)
chr7 (477-616)||(20549780-20549908)
chr7 (477-545)||(21864857-21864925)
chr7 (477-540)||(32093956-32094020)
chr7 (601-659)||(1885519-1885577)
chr7 (568-661)||(21141004-21141097)
chr7 (477-625)||(22484005-22484142)
chr7 (562-659)||(30730983-30731080)
chr7 (477-585)||(2334270-2334377)
chr7 (480-540)||(13770750-13770810)
chr7 (477-545)||(32287405-32287473)
chr7 (499-546)||(7973087-7973134)
chr7 (514-656)||(9933224-9933364)
chr7 (505-632)||(15902795-15902922)
chr7 (562-641)||(43249957-43250036)
chr7 (497-531)||(10043007-10043041)
chr7 (479-529)||(40287306-40287356)
chr7 (477-546)||(3554448-3554517)
chr7 (497-542)||(8234198-8234243)
chr7 (525-631)||(8842318-8842420)
chr7 (477-533)||(20545186-20545242)
chr7 (562-606)||(29787385-29787429)
chr7 (570-638)||(36297369-36297436)
chr7 (488-531)||(3294257-3294300)
chr7 (547-622)||(9482917-9482992)
chr7 (478-540)||(2533761-2533823)
chr7 (547-625)||(3721074-3721151)
chr7 (477-523)||(6490787-6490833)
chr7 (477-523)||(10359670-10359716)
chr7 (550-616)||(22868031-22868097)
chr7 (562-632)||(24105651-24105721)
chr7 (477-523)||(24105749-24105795)
chr7 (477-523)||(40131941-40131987)
chr7 (506-640)||(48246773-48246907)
chr7 (576-637)||(2425763-2425824)
chr7 (581-638)||(31808544-31808600)
chr7 (547-616)||(42720891-42720960)
chr7 (582-631)||(49107795-49107844)
[»] chr4 (67 HSPs)
chr4 (477-661)||(30982809-30982990)
chr4 (477-659)||(23292928-23293099)
chr4 (477-642)||(36635287-36635447)
chr4 (477-613)||(24613632-24613768)
chr4 (477-606)||(22234821-22234951)
chr4 (497-659)||(903868-904030)
chr4 (477-659)||(19482614-19482796)
chr4 (477-614)||(47263977-47264114)
chr4 (477-659)||(24343453-24343630)
chr4 (471-534)||(29205528-29205591)
chr4 (477-659)||(44081509-44081690)
chr4 (477-658)||(847898-848079)
chr4 (479-545)||(12797282-12797348)
chr4 (477-615)||(23861371-23861500)
chr4 (477-638)||(5414103-5414264)
chr4 (488-625)||(30522858-30522994)
chr4 (477-629)||(38148656-38148808)
chr4 (477-533)||(715547-715603)
chr4 (477-533)||(752873-752929)
chr4 (477-545)||(12895216-12895284)
chr4 (477-585)||(19312355-19312463)
chr4 (477-545)||(34306746-34306814)
chr4 (477-540)||(14465007-14465070)
chr4 (477-606)||(3947703-3947826)
chr4 (490-612)||(5832638-5832760)
chr4 (525-622)||(4383351-4383447)
chr4 (562-655)||(13783231-13783324)
chr4 (590-659)||(20633431-20633500)
chr4 (562-630)||(22440616-22440684)
chr4 (479-655)||(27706110-27706286)
chr4 (477-545)||(28964190-28964258)
chr4 (477-545)||(35157927-35157995)
chr4 (547-606)||(8423719-8423778)
chr4 (479-545)||(20743210-20743277)
chr4 (562-641)||(21945467-21945546)
chr4 (576-659)||(33950082-33950165)
chr4 (475-545)||(4157198-4157268)
chr4 (475-545)||(4157485-4157555)
chr4 (541-638)||(5775353-5775452)
chr4 (477-546)||(8423660-8423729)
chr4 (488-545)||(21945552-21945609)
chr4 (477-534)||(35161096-35161153)
chr4 (536-616)||(35723374-35723455)
chr4 (477-522)||(37203324-37203369)
chr4 (478-523)||(46715416-46715461)
chr4 (488-545)||(49431075-49431132)
chr4 (477-533)||(3064870-3064926)
chr4 (477-545)||(16073443-16073511)
chr4 (505-545)||(29205493-29205533)
chr4 (477-532)||(7214468-7214523)
chr4 (529-604)||(21658797-21658872)
chr4 (482-529)||(21873309-21873356)
chr4 (482-529)||(21929170-21929217)
chr4 (480-623)||(30838192-30838335)
chr4 (562-637)||(40179652-40179727)
chr4 (477-606)||(11931279-11931408)
chr4 (481-523)||(30094084-30094126)
chr4 (472-529)||(482180-482237)
chr4 (477-546)||(21345475-21345544)
chr4 (488-545)||(30103310-30103367)
chr4 (477-514)||(30299009-30299046)
chr4 (477-514)||(30327877-30327914)
chr4 (500-533)||(36409469-36409502)
chr4 (500-533)||(36423635-36423668)
chr4 (495-544)||(40179596-40179645)
chr4 (553-606)||(40613449-40613502)
chr4 (477-545)||(53381532-53381601)
[»] chr5 (58 HSPs)
chr5 (477-659)||(21522696-21522878)
chr5 (477-659)||(21533262-21533444)
chr5 (475-659)||(19579647-19579831)
chr5 (477-606)||(3966502-3966631)
chr5 (488-659)||(15382423-15382591)
chr5 (477-606)||(7677704-7677833)
chr5 (480-630)||(15410382-15410532)
chr5 (477-606)||(32766874-32767003)
chr5 (546-653)||(12927606-12927713)
chr5 (477-659)||(6401444-6401626)
chr5 (536-638)||(22423802-22423904)
chr5 (477-642)||(37328777-37328940)
chr5 (480-625)||(7174954-7175098)
chr5 (477-659)||(17122995-17123164)
chr5 (478-606)||(18592072-18592200)
chr5 (477-621)||(30098310-30098454)
chr5 (476-642)||(21190997-21191152)
chr5 (477-640)||(19820330-19820488)
chr5 (477-658)||(30502330-30502500)
chr5 (477-658)||(30542673-30542843)
chr5 (527-604)||(12264810-12264887)
chr5 (568-656)||(13287421-13287509)
chr5 (562-638)||(22299497-22299572)
chr5 (525-605)||(25817495-25817575)
chr5 (568-659)||(6770489-6770580)
chr5 (477-587)||(21814279-21814389)
chr5 (499-637)||(36642716-36642853)
chr5 (477-606)||(11685938-11686066)
chr5 (505-642)||(21541993-21542130)
chr5 (560-616)||(19438332-19438388)
chr5 (563-659)||(26205777-26205873)
chr5 (477-545)||(28588616-28588684)
chr5 (477-605)||(41091188-41091316)
chr5 (499-614)||(12641665-12641780)
chr5 (477-595)||(14873527-14873639)
chr5 (547-650)||(16203796-16203899)
chr5 (480-534)||(21194068-21194122)
chr5 (477-523)||(21351852-21351898)
chr5 (570-660)||(41995416-41995506)
chr5 (477-534)||(16304368-16304425)
chr5 (477-598)||(40131628-40131749)
chr5 (475-540)||(43001859-43001924)
chr5 (476-545)||(18421778-18421851)
chr5 (570-642)||(41558707-41558779)
chr5 (477-545)||(42893409-42893477)
chr5 (529-616)||(6035472-6035558)
chr5 (499-598)||(30183556-30183655)
chr5 (580-623)||(38816729-38816772)
chr5 (477-523)||(2436982-2437028)
chr5 (562-641)||(4105221-4105302)
chr5 (530-616)||(21351889-21351975)
chr5 (590-640)||(22013379-22013429)
chr5 (479-545)||(30098982-30099048)
chr5 (563-637)||(34879318-34879392)
chr5 (477-527)||(38464315-38464365)
chr5 (576-642)||(42469184-42469250)
chr5 (562-639)||(6247588-6247665)
chr5 (590-659)||(25888339-25888408)
[»] scaffold0008 (1 HSPs)
scaffold0008 (477-653)||(263303-263479)
[»] scaffold0003 (1 HSPs)
scaffold0003 (477-641)||(241558-241722)
[»] chr3 (64 HSPs)
chr3 (477-659)||(15796225-15796407)
chr3 (477-604)||(8039766-8039893)
chr3 (476-616)||(4987221-4987361)
chr3 (477-641)||(41961581-41961745)
chr3 (477-545)||(40993277-40993345)
chr3 (568-659)||(3164047-3164138)
chr3 (475-614)||(29508435-29508569)
chr3 (524-638)||(16192728-16192842)
chr3 (481-637)||(25064877-25065031)
chr3 (499-623)||(14832081-14832205)
chr3 (477-545)||(20503514-20503582)
chr3 (477-545)||(55401124-55401192)
chr3 (494-632)||(2620003-2620139)
chr3 (477-604)||(17005550-17005677)
chr3 (562-659)||(24205057-24205154)
chr3 (477-606)||(34185054-34185183)
chr3 (562-642)||(4990983-4991063)
chr3 (562-642)||(8383220-8383300)
chr3 (477-641)||(28917965-28918120)
chr3 (477-540)||(27505305-27505368)
chr3 (479-637)||(11665912-11666070)
chr3 (506-616)||(26290360-26290470)
chr3 (488-598)||(28812522-28812632)
chr3 (477-523)||(40052383-40052429)
chr3 (479-659)||(25093448-25093617)
chr3 (477-625)||(37077338-37077487)
chr3 (477-606)||(49651718-49651846)
chr3 (568-640)||(4466622-4466694)
chr3 (479-638)||(14829657-14829816)
chr3 (475-523)||(25775578-25775626)
chr3 (477-545)||(8789490-8789560)
chr3 (576-659)||(10335316-10335399)
chr3 (488-606)||(11313737-11313860)
chr3 (568-619)||(13620786-13620837)
chr3 (525-659)||(34307765-34307893)
chr3 (562-616)||(1438793-1438847)
chr3 (482-540)||(3631738-3631796)
chr3 (562-640)||(8587037-8587115)
chr3 (472-546)||(8842377-8842451)
chr3 (477-543)||(26492147-26492213)
chr3 (477-518)||(34910393-34910434)
chr3 (477-540)||(5440969-5441033)
chr3 (477-545)||(11252025-11252093)
chr3 (477-533)||(15999952-16000008)
chr3 (477-637)||(16788980-16789139)
chr3 (537-641)||(39001996-39002100)
chr3 (525-604)||(1550141-1550220)
chr3 (547-606)||(7614416-7614475)
chr3 (547-606)||(7928449-7928508)
chr3 (562-625)||(11493377-11493440)
chr3 (488-523)||(21720843-21720878)
chr3 (541-640)||(32429375-32429474)
chr3 (506-545)||(45451602-45451641)
chr3 (547-602)||(49505155-49505210)
chr3 (518-659)||(750590-750732)
chr3 (562-616)||(15544682-15544736)
chr3 (477-523)||(25074866-25074912)
chr3 (570-623)||(5407271-5407324)
chr3 (610-659)||(7171448-7171497)
chr3 (488-541)||(7171554-7171607)
chr3 (477-546)||(18426997-18427066)
chr3 (474-523)||(24204980-24205029)
chr3 (530-599)||(28678309-28678378)
chr3 (562-659)||(35994754-35994850)
[»] scaffold0036 (1 HSPs)
scaffold0036 (477-598)||(9678-9799)
[»] chr2 (49 HSPs)
chr2 (472-659)||(34784908-34785095)
chr2 (476-545)||(2438660-2438729)
chr2 (477-606)||(27286223-27286352)
chr2 (477-545)||(18840955-18841023)
chr2 (477-605)||(44860320-44860448)
chr2 (477-623)||(22084758-22084909)
chr2 (553-632)||(23717999-23718078)
chr2 (553-632)||(24105671-24105750)
chr2 (477-556)||(26769560-26769639)
chr2 (477-630)||(11223795-11223947)
chr2 (478-642)||(17776551-17776714)
chr2 (477-659)||(24975257-24975429)
chr2 (477-621)||(37419727-37419871)
chr2 (477-637)||(21782746-21782909)
chr2 (576-659)||(31283994-31284077)
chr2 (562-660)||(21616707-21616805)
chr2 (562-659)||(18276467-18276564)
chr2 (477-605)||(4207857-4207984)
chr2 (477-545)||(15972922-15972990)
chr2 (505-659)||(28677854-28678003)
chr2 (586-640)||(33519751-33519805)
chr2 (477-587)||(36096306-36096416)
chr2 (476-642)||(36756274-36756440)
chr2 (562-642)||(28412313-28412393)
chr2 (548-616)||(31808066-31808134)
chr2 (477-541)||(38117101-38117165)
chr2 (477-536)||(15907853-15907912)
chr2 (477-523)||(15909572-15909618)
chr2 (562-632)||(30404866-30404936)
chr2 (477-540)||(35449561-35449626)
chr2 (506-606)||(18889550-18889651)
chr2 (476-545)||(19942314-19942383)
chr2 (520-624)||(4882670-4882774)
chr2 (497-545)||(5367241-5367289)
chr2 (594-654)||(18054852-18054912)
chr2 (488-548)||(27084315-27084375)
chr2 (562-638)||(31018557-31018633)
chr2 (477-545)||(37559026-37559094)
chr2 (478-545)||(21091772-21091839)
chr2 (562-625)||(39323244-39323307)
chr2 (477-523)||(10535687-10535733)
chr2 (547-632)||(18589171-18589254)
chr2 (609-659)||(18631462-18631512)
chr2 (477-539)||(19959881-19959943)
chr2 (529-630)||(36409612-36409711)
chr2 (568-606)||(37411266-37411304)
chr2 (497-597)||(2331802-2331900)
chr2 (562-603)||(25846743-25846784)
chr2 (563-616)||(29970566-29970619)
[»] scaffold0044 (1 HSPs)
scaffold0044 (497-642)||(53147-53288)
[»] scaffold0136 (1 HSPs)
scaffold0136 (477-606)||(3780-3909)
[»] scaffold0004 (1 HSPs)
scaffold0004 (477-622)||(92790-92939)
[»] scaffold0019 (1 HSPs)
scaffold0019 (477-556)||(71774-71853)
[»] scaffold0168 (1 HSPs)
scaffold0168 (529-658)||(20990-21119)
[»] scaffold0050 (1 HSPs)
scaffold0050 (478-545)||(70327-70394)
[»] scaffold0223 (1 HSPs)
scaffold0223 (538-640)||(20137-20239)
[»] scaffold0123 (1 HSPs)
scaffold0123 (507-605)||(44486-44584)
[»] scaffold0652 (1 HSPs)
scaffold0652 (477-661)||(404-577)
[»] scaffold0086 (1 HSPs)
scaffold0086 (481-554)||(2979-3052)
[»] scaffold0793 (1 HSPs)
scaffold0793 (477-533)||(4823-4879)
[»] scaffold0306 (1 HSPs)
scaffold0306 (568-640)||(13365-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (568-640)||(21890-21962)
[»] scaffold0053 (1 HSPs)
scaffold0053 (477-659)||(8744-8915)
[»] scaffold0475 (1 HSPs)
scaffold0475 (581-659)||(3262-3340)
[»] scaffold0122 (1 HSPs)
scaffold0122 (532-642)||(8629-8739)
[»] scaffold1528 (1 HSPs)
scaffold1528 (520-653)||(987-1120)
[»] scaffold0039 (1 HSPs)
scaffold0039 (494-606)||(84921-85033)
[»] scaffold0007 (1 HSPs)
scaffold0007 (576-659)||(225298-225381)
[»] scaffold0024 (1 HSPs)
scaffold0024 (514-659)||(68210-68355)
[»] scaffold0018 (1 HSPs)
scaffold0018 (541-637)||(178813-178910)
[»] scaffold0361 (1 HSPs)
scaffold0361 (477-541)||(14580-14644)
[»] scaffold0188 (1 HSPs)
scaffold0188 (580-659)||(9486-9565)
[»] scaffold0020 (1 HSPs)
scaffold0020 (542-612)||(135308-135378)
[»] scaffold0021 (1 HSPs)
scaffold0021 (562-659)||(130428-130525)
[»] scaffold0011 (1 HSPs)
scaffold0011 (472-545)||(17539-17612)


Alignment Details
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 4999967 - 5000332
Alignment:
Q  28 gacattcttataacgtctttcgtcataaataattttatagattaaattgattatcgaaaagacatacaagacctacttgatgacccaaattgactaagaa 127  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4999967 gacattcttataacgtctttcattataaataattttatagattaaattgattatcgaaaagacatacaagacctacttgatgacccaaattgactaagaa 5000066  T
Q  128 aagatgcatctatgcatgtttttataattttt-tccattcaaggactatgtcacaatgtttcaagatactattatcacaatgttt----------cnnnn 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||                   
T  5000067 aagatgcatctatgcatgtttttataatttttatccattcaaggactatgtcaaaatgtttcaagatactattatcacaatgtttaaaaaaaaaagaaaa 5000166  T
Q  217 nnnnggctatagtctatagacagtactgctgctgcttctgcactattttggctatattgagaaaggtgagagcaatgagtcatggtgagctactgagctt 316  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000167 aaaaggctatagtctatagacagtactgctgctgcttctgcactattttggctatattgagaaaggtgagagcaatgagtcatggtgagctactgagctt 5000266  T
Q  317 tgagcaagatgcttctgttatgaatttgtggaccatttattgagtcataagtgtactctttcactg 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5000267 tgagcaagatgcttctgttatgaatttgtggaccatttattgagtcataattgtactctttcactg 5000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 375 - 714
Target Start/End: Original strand, 5000457 - 5000794
Alignment:
Q  375 tttcactgtccctctgtgtgtctatcactctctgatggacactgtgcttctccaacagttacatgacaaagaataatcnnnnnnnnnnctctcactttat 474  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| ||||| ||    
T  5000457 tttctctgtccctctgtgtgtctatcactctctgatggacactgtgcttctccaacagttacatgacaaagaataatctttttttc--ctcccacttcat 5000554  T
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 574  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000555 caatgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 5000654  T
Q  575 catgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcattagttcatcctcctc 674  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5000655 catgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcattagttcatcctcgtc 5000754  T
Q  675 tttatgttcttcttcaatttcttctcatatatataagaat 714  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5000755 tttatgttcttcttcaatttcttctcatatatataagaat 5000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 16766825 - 16766643
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||| |||| ||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  16766825 atgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 16766726  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||| ||||||  |||||||| ||| |||| ||||||||||||||||  |||||  ||||||||    
T  16766725 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcat 16766643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 10339056 - 10339239
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatt-atactgaatc 575  Q
    |||||||||| |||||| || |||||| |||||||| ||||||||||||||||||||| |||||||||| | |||||||| ||| |||| | |||||||     
T  10339056 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaatt 10339155  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||||||| ||||| | |||||||||  |||||||| | | |||| ||||| |||||| ||| |||||| |||||||||    
T  10339156 atgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgcttcat 10339239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 489 - 659
Target Start/End: Original strand, 5970051 - 5970215
Alignment:
Q  489 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctc 588  Q
    ||||| ||||||| | ||||||||| ||||||| |||||||||||| |||||||||| |||||  |||| |  ||||| ||||||| |||||||||| ||    
T  5970051 cactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttc 5970150  T
Q  589 gaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
     |||||||| | ||||||| |||      |||||||||||||||||||||||||  |||||||||||||||    
T  5970151 aaattattaactgtgtcgacgtg------tccgtgtcatgtccggtgtccgtgtccgtatctgtgcttcat 5970215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 9107301 - 9107483
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||  ||||| |||||||||  ||||||||||||||||||   || ||||| |||||||||| ||||| ||||  |  ||||| |||||||      
T  9107301 atgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattt 9107400  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||| ||||||  |||| ||| |||||||| ||||||||||||||||  ||||| |||||||||    
T  9107401 tgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccgtgcttcat 9107483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 18367964 - 18367783
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | |||| || |||||||| ||||| |||||||||||||||||||||||||| ||||| |||| ||| ||||| |||| ||      
T  18367964 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattt 18367865  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||  ||  |||||| ||||||  ||||| || ||| |||| ||||||||||||||||  ||||| |||||||||    
T  18367864 tgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 18367783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 477 - 643
Target Start/End: Complemental strand, 9629511 - 9629345
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat-gacactgacatataaaattatactgaatc 575  Q
    |||||||| | |||||| |||||||||||||||| | ||||||||||  ||| ||||| ||||| ||||  ||||| |||| ||| ||||| | |||||     
T  9629511 atgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac-gacaccgacaccgacacatataattacattgaatt 9629413  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgta 643  Q
    ||||||||||||| ||||||| |||||||||  |||||| |||||||||| ||||| ||||| |||||    
T  9629412 atgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgtgta 9629345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 477 - 641
Target Start/End: Original strand, 34073280 - 34073442
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||| |||||| ||||||||||||||| ||  ||||||||  |||||||||| ||||| |||  ||| ||||| ||||||| |    
T  34073280 atgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactgaatta 34073377  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    || ||||||||| ||||||||||| ||| |   ||||||| |||||||| ||||| |||||||||    
T  34073378 tgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgtg 34073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 545
Target Start/End: Original strand, 32978842 - 32978909
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 32978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 10294235 - 10294053
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  |||||| || ||||||  ||||||  || |||||||  ||||||||| |||||| ||| ||||| |||| ||| ||||| | ||||  |    
T  10294235 atgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaata 10294136  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    || |||| |||| ||||||||||||| |||   |||||||||||||||| |||||||||| |||||  ||||| |||||||||    
T  10294135 tgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 10294053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 659
Target Start/End: Complemental strand, 8714097 - 8713931
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtga-ttttc 586  Q
    |||||| ||||||| | ||||||||| ||||||| |||||||||||| |||||||||| |||||  |||| |  ||||| ||||||| |||||| ||||     
T  8714097 acactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttt 8713998  T
Q  587 tcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    || |||||||| | ||||||| |||      ||| |||||||||||||||||||||  |||| ||||||||||    
T  8713997 tcaaattattaactgtgtcgacgtg------tccatgtcatgtccggtgtccgtgtccgtatttgtgcttcat 8713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 659
Target Start/End: Complemental strand, 9027241 - 9027124
Alignment:
Q  542 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||| ||||| |||| ||| ||||| || |||| |||||||| |||| |||||||||||||||||  |||||||| |||||||| ||||||| |||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtg 9027142  T
Q  642 tatgtatctgtgcttcat 659  Q
    |  ||||| |||||||||    
T  9027141 tccgtatcggtgcttcat 9027124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 24645598 - 24645530
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||  |||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  24645598 atgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgaca 24645530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 28152215 - 28152147
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||| ||||||||||    
T  28152215 atgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 28152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 477 - 640
Target Start/End: Complemental strand, 31385047 - 31384885
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | ||||||| ||||||||||||| ||||| ||||||||||  ||| | ||| ||||||||||  |  ||||| ||||||| |    
T  31385047 atgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaatta 31384949  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||||| || |||||||||  || || |  || |||||||||| |||||| ||||||||||    
T  31384948 tgtgattttttcaaattattagttgtatcaacatgccagtatccgtatcatgttcggtgtccgt 31384885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 553 - 640
Target Start/End: Original strand, 30866151 - 30866238
Alignment:
Q  553 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    |||| ||| ||||| | ||||| ||||||||||||| ||||||||||||||| | |||||| || || ||||||||||||||||||||    
T  30866151 gacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgt 30866238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 477 - 603
Target Start/End: Complemental strand, 7248486 - 7248360
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||  ||| |||||  ||||||||| ||| |  ||| ||| |||||  |||||| |    
T  7248486 atgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 7248387  T
Q  577 tgtgattttctcgaattattagcggtg 603  Q
    |||||||| |||  |||||||| ||||    
T  7248386 tgtgatttcctcagattattagtggtg 7248360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 541 - 659
Target Start/End: Original strand, 10888969 - 10889087
Alignment:
Q  541 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||| |||||| ||| ||| ||| | ||| ||| |||||||||| || |||||||||||||||| ||||||| || ||||||||||||  | |||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtcatgtttgatgtccgt 10889068  T
Q  641 gtatgtatctgtgcttcat 659  Q
    || || ||| |||||||||    
T  10889069 gtctgcatccgtgcttcat 10889087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 640
Target Start/End: Complemental strand, 3398733 - 3398584
Alignment:
Q  484 acgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgatt 583  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||      || ||| ||||| || |  || ||||| ||||||| || |||||    
T  3398733 acgaacactcctctgattagacgtgttccggtgtcggacatgtgtcgtgt------ccaacacgacaccgatacttataattacactgaattatatgatt 3398640  T
Q  584 ttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    || || |||||||||| ||||||  |||||||| |||||||| ||| || |||||||    
T  3398639 tt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgt 3398584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 641
Target Start/End: Original strand, 13360315 - 13360467
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||||| ||| ||||||||||||||          ||||||  ||||| ||||||| |    
T  13360315 atgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccga---------aacatat--aattacactgaatta 13360402  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||||||||||| ||||| ||| |||||||| ||||| || | ||| || ||||| |||||||||    
T  13360403 tgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgtccagtgtccgtg 13360467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 641
Target Start/End: Complemental strand, 34595251 - 34595098
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||||||  ||||||||||||| |||| |||||||||| ||||||     ||||||      |  ||||| ||||||| |    
T  34595251 atgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacc-----gacact------tgtaattacactgaatta 34595163  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    ||||||||| || |||||||||  ||||||  |||||| | |||||||| |||||||||||||||    
T  34595162 tgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtg 34595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 4878059 - 4877992
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| ||||||||| ||||||| | |||||||||||||||||||| ||||||||||    
T  4878059 atgaagcacggacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgaca 4877992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 625
Target Start/End: Complemental strand, 17435327 - 17435179
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||| ||| ||||| ||| ||||||||||||||| |||||| ||| |||||||||| |||| |||||  ||||| |||  |  ||||| ||||||| |    
T  17435327 atgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaatta 17435228  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||| ||||| |  ||||||||||  |||||| || ||||| ||||||||    
T  17435227 tgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtc 17435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 547 - 618
Target Start/End: Complemental strand, 19040410 - 19040339
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtat 618  Q
    ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 649
Target Start/End: Original strand, 5732511 - 5732613
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgt 646  Q
    ||||| |||| ||| ||||| ||| ||  ||||||||||||| |||||||| ||||||||  |||||||| ||| |||| ||||| |||||||||| |||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtctgt 5732610  T
Q  647 atc 649  Q
    |||    
T  5732611 atc 5732613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 621
Target Start/End: Original strand, 7265530 - 7265668
Alignment:
Q  472 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactg 571  Q
    ||||||||||||||| || ||| ||||||||| | | | |||||||||||||||| | ||||| ||||||||||         |||||||  ||| ||||    
T  7265530 tatcaatgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgaca---------catataa--ttacactg 7265618  T
Q  572 aatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccg 621  Q
    ||| ||||||||||||| ||||||||||||||| |  |||||||| ||||    
T  7265619 aattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 630
Target Start/End: Complemental strand, 9658936 - 9658854
Alignment:
Q  548 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 630  Q
    |||| |||| ||| ||||| ||||||| ||||||||||||  |||||||||||||||||  |||||||| |||||||| ||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 642
Target Start/End: Complemental strand, 11352491 - 11352322
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 574  Q
    |||| ||||||| |||||||| || | | |||||||| | ||||||||| |||| |||||||| ||||||| |||| ||| | ||| ||||| |  ||||    
T  11352491 caataaagcacggacactctttgggtaaaacgtgtcctgatgtcggacacgtgttgtgtctgataccgacacgacattgatacatataattacaaggaat 11352392  T
Q  575 catgtgattttctcgaat--tattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
     | ||||||||||| | |  |||||||||||||||  ||| |||||| ||||| ||| || |||||||||    
T  11352391 taggtgattttctcaacttatattagcggtgtcgacatgttagtatctgtgtcgtgttcgatgtccgtgt 11352322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 587
Target Start/End: Original strand, 16488521 - 16488631
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||||||| || | |||| || |||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| ||| ||||| |||| ||      
T  16488521 atgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattt 16488620  T
Q  577 tgtgattttct 587  Q
    |||||||||||    
T  16488621 tgtgattttct 16488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 606
Target Start/End: Complemental strand, 26562818 - 26562688
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    ||||||| |||||||||  || |||||| | |||| |  | ||||||||||| |||||  |||||||||| ||||  |||| ||| ||||| |||||||     
T  26562818 aatgaagtacgaacacttctcagattagccatgtctctatatcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaatt 26562719  T
Q  576 atgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||||||||| |||| ||||| ||||||    
T  26562718 atgtgattttctcaaatttttagcagtgtcg 26562688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 625
Target Start/End: Complemental strand, 4040559 - 4040446
Alignment:
Q  512 cggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtg 611  Q
    |||||| ||| | ||||||||||||| | ||| | ||| | |||||||| ||||||||||||| ||| ||||||||  ||||||||| ||||||| |||     
T  4040559 cggtgttggatacgtgtcgtgtctgatatcgagacgacgccgacatatataattatactgaataatgcgattttcttaaattattagtggtgtcggtgtt 4040460  T
Q  612 tcagtatccgtgtc 625  Q
    | ||| ||||||||    
T  4040459 taagtgtccgtgtc 4040446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 659
Target Start/End: Complemental strand, 7938159 - 7938062
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||| ||| || ||||||| || |||||||||| ||||||  |||||||| ||| |||| ||||||||||||||||  ||||| |||||||||    
T  7938159 aattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 7938062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 606
Target Start/End: Original strand, 8931561 - 8931662
Alignment:
Q  505 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    |||||| | |||| ||| ||||||||  ||||||||||||| ||||  |||| ||| ||||||||||||| |||| |||||||| |||| ||||| ||||    
T  8931561 cgtgtctccgtgttggatatgtgtcgcatctgacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgt 8931660  T
Q  605 cg 606  Q
    ||    
T  8931661 cg 8931662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 642
Target Start/End: Complemental strand, 13851788 - 13851699
Alignment:
Q  553 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    |||| ||| ||||| ||||||| | || |||||||| |||||||||||||||||| |||||||| |||||||| ||| |  |||||||||    
T  13851788 gacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgt 13851699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 642
Target Start/End: Original strand, 7977846 - 7977926
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||||| ||||||| |||| ||||| || |||||||||| ||||||  |||||||||||| |||| ||||| ||||||||||    
T  7977846 aattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgt 7977926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 622
Target Start/End: Original strand, 9195734 - 9195830
Alignment:
Q  526 tgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 622  Q
    ||||||||| |||||| ||| ||||| |||| ||| ||||| ||| ||| |||| |||||||| |||||||||  ||||||||||||  ||||||||    
T  9195734 tgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgttcgtatccgt 9195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 625
Target Start/End: Original strand, 25038038 - 25038150
Alignment:
Q  513 ggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 612  Q
    ||||||||||| |||||||||| |||||| |||  | || ||||| |  ||||| ||| ||| |||| |||||||| |||||||| ||||||| | ||||    
T  25038038 ggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgt 25038137  T
Q  613 cagtatccgtgtc 625  Q
    ||||||| |||||    
T  25038138 cagtatctgtgtc 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 28715412 - 28715344
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||  ||| ||||| ||||||||||||||| ||| |||||||||| ||||||||||    
T  28715412 atgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgaca 28715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 642
Target Start/End: Complemental strand, 1532365 - 1532201
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||| ||||||  || |||| ||| | ||||||||  ||||||||||| ||| |||||   || ||| ||||| ||||||| |    
T  1532365 atgaagcacggacactcctcgaattagatatgccccgatgtagaacatgtgtgatgtctgacaccaacacgacac---cacatataattacactgaatta 1532269  T
Q  577 tgtgattttctcgaattattagcg--gtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||| ||||| || |||||||||||  ||||||| |||||||| |  ||||| ||| |||||| |||||    
T  1532268 tgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgtgcgtgt 1532201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 8776910 - 8777086
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||||||  ||||| |||||||||||| |||||||||| |   ||     |||||  |||  |  ||||| |||||||      
T  8776910 atgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc-gtgtcc-----gacaccaacacttgtaattacactgaattt 8777003  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||  ||||||  |||||||| |||||||| |||||| |||||||||  ||||| |||||||||    
T  8777004 tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcat 8777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 581 - 659
Target Start/End: Original strand, 21395342 - 21395420
Alignment:
Q  581 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||| ||||||||||||||| |  ||||| || ||| |||||| ||||||||| |||| |||||| |||||||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgtgtctgtatccgtgcttcat 21395420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 561
Target Start/End: Original strand, 23130405 - 23130487
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataa 561  Q
    |||||||  |||||| || |||||| | ||||||| | || |||| ||||||||||||||||| |||||||||||||| ||||    
T  23130405 gaagcacatacactcctcagattaggcatgtcccgatatcagacacgtgtcgtgtctgacaccaacatgacactgacacataa 23130487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 8805588 - 8805685
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||| ||| ||||||||||||| |||||||||| ||| ||| ||||| || || ||||| |||| |||||  |||||||||||  ||||||||    
T  8805588 aattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatccatgcttcat 8805685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 659
Target Start/End: Complemental strand, 32299310 - 32299221
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||||||||| |||||||| | | || | |||||||||||  |||| ||||| |||||| |||| |||||| |||||||||    
T  32299310 tgaattatgtgattttctcaaattattatcagggttggtgtgtcagtatttgtgttatgtctggtgtctgtgtctgtatccgtgcttcat 32299221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 640
Target Start/End: Original strand, 853889 - 853953
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    |||||||||| || |||||||||  ||||||  ||||||| ||||||||| ||||||||||||||    
T  853889 atgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgt 853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 6898223 - 6898291
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||||||||| ||||||||| |||||  |||||| ||||| |  ||||||| ||||||||||    
T  6898223 atgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgaca 6898291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 610
Target Start/End: Original strand, 9025490 - 9025558
Alignment:
Q  542 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgt 610  Q
    |||| ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||||||| ||||| ||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtccatgt 9025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 545 - 597
Target Start/End: Original strand, 11784215 - 11784267
Alignment:
Q  545 atgacactgacatataaaattatactgaatcatgtgattttctcgaattatta 597  Q
    ||||||| |||||||| ||||| ||||| ||||||||||||||| ||||||||    
T  11784215 atgacaccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 13364647 - 13364715
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||  |||||| ||||| ||||||||||| |||||| ||||||| |||||||  |||||||||    
T  13364647 atgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgaca 13364715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 552
Target Start/End: Original strand, 8389411 - 8389485
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca-tgtgtcgtgtctgacaccgacatgacact 552  Q
    ||||||||| |||||| |||||||||  ||||||||||||||||||  |||| | ||| |||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgacatgacact 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 616
Target Start/End: Complemental strand, 32313504 - 32313393
Alignment:
Q  506 gtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    |||||||||||| ||||||  ||| |||||||||||||||| |||||  ||| ||| ||||  | |||||||||| |||||||| | ||||||  |||||    
T  32313504 gtgtcccggtgttggacatacgtcagtgtctgacaccgacacgacacccacacatataattgcattgaatcatgttattttctcaacttattattggtgt 32313405  T
Q  605 cgatgtgtcagt 616  Q
    ||  ||||||||    
T  32313404 cggcgtgtcagt 32313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 9027284 - 9027238
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||| ||||||| | ||||||| |||||||||||||||||||    
T  9027284 atgaagcacaaacactccttggattagccgtgtcccggtgtcggaca 9027238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 488 - 546
Target Start/End: Complemental strand, 23771684 - 23771626
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    ||||||||| | ||||||||||| | ||||||||||  ||||||||| |||||||||||    
T  23771684 acactcttcaggttagacgtgtctctgtgtcggacacatgtcgtgtccgacaccgacat 23771626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 632
Target Start/End: Original strand, 31579241 - 31579311
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||||| ||||||| ||||||||||||| |||||||| |||||| | |||| |||| ||| |||| ||||||    
T  31579241 aattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 31959267 - 31959221
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||    
T  31959267 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 31959221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 523
Target Start/End: Original strand, 9025448 - 9025493
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||| |||||  ||||||||| |||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggaca 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 598
Target Start/End: Complemental strand, 9522999 - 9522898
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 596  Q
    ||||||| |||||| |||||||||||| ||||||  || ||||||||||  |||| ||||  |  ||||| ||||||| |||||||||| |  |||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatt 9522900  T
Q  597 ag 598  Q
    ||    
T  9522899 ag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 530
Target Start/End: Complemental strand, 12236776 - 12236723
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg 530  Q
    ||||||||||||||||| || | |||| |||||||||||| || ||||||||||    
T  12236776 atgaagcacgaacactcctcaggttaggcgtgtcccggtgccgaacatgtgtcg 12236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 625
Target Start/End: Original strand, 20371140 - 20371189
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||||||||||| |||||||||||||||||  |||||| | ||||||||    
T  20371140 atgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 566
Target Start/End: Original strand, 21223717 - 21223786
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatta 566  Q
    ||||||| |||| |||| ||||||||| | || ||||  |||||||||| |||||||||||||| |||||    
T  21223717 ggattaggcgtgacccgttgtcggacacgcgttgtgttcgacaccgacacgacactgacatatataatta 21223786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 24831914 - 24831861
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 541  Q
    |||||||||||||||||||||||||| |||| || || ||| |||| |||||||    
T  24831914 acactcttcggattagacgtgtcccgatgtcagatatatgttgtgtttgacacc 24831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 6e-39; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 22652104 - 22651922
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||  |  ||||||| ||||| |    
T  22652104 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaatta 22652005  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||| ||||||  |||||||| |||||||| ||||||||||| ||||  ||||| || ||||||    
T  22652004 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccgtacttcat 22651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 29510235 - 29510417
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||| | |||||||| ||||||||||  |||| ||||  |  |||||||||||||      
T  29510235 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattt 29510334  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||| ||||||  |||||||| |||||||| |||||||||||| |||  ||||| |||||||||    
T  29510335 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcat 29510417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 24362132 - 24362315
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctg-acaccgacatgacactgacatataaaattatactgaatc 575  Q
    |||||||| | |||||||||  |||||||||    ||||| |||||| |||||||||| | ||||||||| |||| ||||| ||| ||||| |||||||     
T  24362132 atgaagcatggacactcttcaaattagacgttattcggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaatt 24362231  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||| |||| |||||||||||||||||  ||||| || || ||||| | |||||||||||| |  |||||||||||||||    
T  24362232 atgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcat 24362315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 477 - 640
Target Start/End: Complemental strand, 11944793 - 11944630
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||| |  |||||||| ||||| | ||| ||||| |||| ||| ||||| ||||| | |    
T  11944793 atgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagtta 11944694  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||||| || |||||||| | ||||||  |||| || ||||||||| |||  |||||||||    
T  11944693 tgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgt 11944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 506 - 659
Target Start/End: Original strand, 2572016 - 2572169
Alignment:
Q  506 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 605  Q
    |||||||||| ||||||| |||||||||| ||||| |||| ||||| ||||  |  ||||| ||| ||| |||||||||| || |||||||||  |||||    
T  2572016 gtgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtc 2572115  T
Q  606 gatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    || ||||| ||||||||||| ||||| ||||||||||  |||||  ||||||||    
T  2572116 gacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccgtatccatgcttcat 2572169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 632
Target Start/End: Complemental strand, 8343444 - 8343289
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||| |||||    | ||||||||||  |  ||||| ||| ||| |    
T  8343444 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaatta 8343345  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||||||||| || ||||||||||  ||||| |||||| || || ||||| ||||||    
T  8343344 tgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccg 8343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 648
Target Start/End: Complemental strand, 11803387 - 11803216
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||||||||| || |||||||||||||||||| ||  ||||| |||  ||||  ||| ||| ||||| ||||||| |    
T  11803387 atgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaatta 11803288  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtat 648  Q
    |||||||||||  |||||||| | |||||  ||| ||||| | |||||| |||  ||||| ||||| |||||    
T  11803287 tgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgtttggtgttcgtgtctgtat 11803216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 622
Target Start/End: Original strand, 15816060 - 15816205
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||   |||||||||| |||||| ||| ||||| ||||  || ||||| ||| ||| |    
T  15816060 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaatta 15816159  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 622  Q
    ||||||||| || |||||||||  ||||||  |||||||| |||||    
T  15816160 tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 582
Target Start/End: Complemental strand, 29447572 - 29447467
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || |||||||| |||||||||||||||||  |||||||||||||||||||| |||||  ||| ||| ||||| ||| ||| |    
T  29447572 atgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaatta 29447473  T
Q  577 tgtgat 582  Q
    ||||||    
T  29447472 tgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 613
Target Start/End: Original strand, 29447041 - 29447177
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | ||||||| ||||||| |||||| ||||  ||||||||| |||||||||||||||| ||||  |  | ||| | ||||| |    
T  29447041 atgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatta 29447140  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtc 613  Q
    |||||||||||| |||||||||  ||||||| |||||    
T  29447141 tgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 44462155 - 44462205
Alignment:
Q  495 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44462155 tcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 44469688 - 44469738
Alignment:
Q  495 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44469688 tcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 605
Target Start/End: Original strand, 12570669 - 12570793
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 579  Q
    ||||||| ||| ||||| |||||| ||||||| ||||||||||| |||| |||||||||||||| |  ||||  ||||||| ||||| ||| ||| |||     
T  12570669 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacaccaacatatataattacacttaattatgc 12570767  T
Q  580 gattttctcgaattattagcggtgtc 605  Q
    | ||||||  ||||||||||||||||    
T  12570768 gtttttcttaaattattagcggtgtc 12570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 37283826 - 37283923
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||| |||||||||||||  ||||||||||||| |    ||||||| ||||||||||||| ||||||| |||| ||||| |||||||||    
T  37283826 aattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccgtgcttcat 37283923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 476 - 659
Target Start/End: Original strand, 926729 - 926901
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    ||||||||||| |||||| |||||| |  | ||||||||||||||||| |||||| ||| ||||||||||         | |||||  ||| ||||||      
T  926729 aatgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgaca---------cttataa--ttacactgaaca 926817  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||| ||||||||| |||||||||  |||| |  |||||||| |||||||| ||||||||||||||||  ||||| |||||||||    
T  926818 atgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcat 926901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 480 - 659
Target Start/End: Original strand, 22197676 - 22197855
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca-tgacactgacatataaaattatactgaatcatg 578  Q
    ||||||| |||||| || |||||| ||||  ||||||||||||| ||||| |||| ||||| |||| |||||||||||  |  ||||| ||| ||| |||    
T  22197676 aagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac-gacactgacactgacacttgtaattacactaaattatg 22197774  T
Q  579 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||| ||| || |||||||||| |||| |  |||| ||| || ||||| |||||||||||||||| |  ||| |||||||||    
T  22197775 tgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtctagatccgtgcttcat 22197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 640
Target Start/End: Original strand, 4673356 - 4673519
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  |||||| | ||||||| ||||| ||||||||||| ||| |||||||| |||| | ||| |||||||| |  |  ||||| |||||||      
T  4673356 atgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaattt 4673455  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    | ||||||| || |||||||| | ||||||  |||||||| || ||||| |||||| |||||||    
T  4673456 tatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgt 4673519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 520 - 642
Target Start/End: Original strand, 28384967 - 28385090
Alignment:
Q  520 gacatgtgt-cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtat 618  Q
    ||||||||| |||||||||||| |||||||||| |||| ||| ||||| ||||||| ||| |||||  ||  ||||||| |||||||| | ||||||| |    
T  28384967 gacatgtgtacgtgtctgacactgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgt 28385066  T
Q  619 ccgtgtcatgtccggtgtccgtgt 642  Q
    ||||||| ||| | || |||||||    
T  28385067 ccgtgtcgtgttcagtatccgtgt 28385090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 545
Target Start/End: Complemental strand, 5813707 - 5813641
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||| |||||| ||  ||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 5813641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 543
Target Start/End: Complemental strand, 31557093 - 31557047
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 543  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 605
Target Start/End: Original strand, 12570443 - 12570567
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 579  Q
    ||||||| ||| ||||| |||||| ||||||| ||||||||||| |||| |||||||||||||| |  |||  |||| ||| ||||| ||| ||| ||||    
T  12570443 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacatcgacacatataattacacttaattatgt 12570541  T
Q  580 gattttctcgaattattagcggtgtc 605  Q
    | ||||||  |||||||||| |||||    
T  12570542 gtttttcttaaattattagcagtgtc 12570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 622
Target Start/End: Complemental strand, 34897137 - 34897068
Alignment:
Q  553 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 622  Q
    |||| ||| ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||| || |||||    
T  34897137 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 638
Target Start/End: Original strand, 13436988 - 13437056
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    ||||| |||||||||| || |||||||||| ||||||  |||||||| ||| |||||||||||||||||    
T  13436988 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtcc 13437056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 545
Target Start/End: Original strand, 33405330 - 33405394
Alignment:
Q  481 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||| |||||| | ||||||| ||||||| |||||| ||||||||||||||| ||||||||||    
T  33405330 agcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgaca 33405394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 570 - 625
Target Start/End: Complemental strand, 36934705 - 36934650
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||| |||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  36934705 tgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtc 36934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 597
Target Start/End: Original strand, 4122182 - 4122300
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 578  Q
    |||||||| |||||||| ||||||||||||| ||||||||  ||| ||||||||| |||||  ||||  |||| |||| ||| ||||| | ||||| ||     
T  4122182 gaagcacggacactctttggattagacgtgttccggtgtccaacacgtgtcgtgtttgacattgacacaacaccgacacatataattacaatgaattata 4122281  T
Q  579 tgattttctcgaattatta 597  Q
    | ||||| || ||||||||    
T  4122282 taattttatctaattatta 4122300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 8343084 - 8343038
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||    
T  8343084 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggaca 8343038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 551
Target Start/End: Original strand, 12402617 - 12402691
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacac 551  Q
    ||||||||||||||||||||  |||| |||||| |||||||||| ||||||| ||||  |||| ||||| |||||    
T  12402617 atgaagcacgaacactcttcaaattatacgtgttccggtgtcgggcatgtgttgtgttcgacatcgacacgacac 12402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 488 - 534
Target Start/End: Original strand, 22943302 - 22943348
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 534  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  22943302 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 587
Target Start/End: Original strand, 26902106 - 26902216
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || ||| || |||||||| ||| | |||| |||||||||| |||||  | | ||||| |||| ||| ||||| ||||||| |    
T  26902106 atgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaatta 26902205  T
Q  577 tgtgattttct 587  Q
    |||||||||||    
T  26902206 tgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 659
Target Start/End: Complemental strand, 44067646 - 44067462
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacat-gacactgacatataaaattatactga 572  Q
    |||||||||||| |||||| ||| ||||| ||||||| ||||||||||| |  || ||||| ||||| ||||  ||||| ||||  || ||||| ||||     
T  44067646 caatgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgacac-gacaccgacac-gacacttataattacactgt 44067549  T
Q  573 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    || |||| |||||||| |||||||| | ||||||  |||||||| || ||||  |||| ||||||||||| ||| || |||||||||    
T  44067548 attatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccgtgcttcat 44067462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 622
Target Start/End: Original strand, 6065588 - 6065733
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | | ||||  ||||| |||||||||||||||||||||||| ||||  |||| || | |||   ||  |||||||||| || |    
T  6065588 atgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacacgatattgattcatgtaattatactgtatta 6065687  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 622  Q
    ||||||||| | ||||||||| | || ||| |||| |||| |||||    
T  6065688 tgtgattttttagaattattaactgtatcggtgtgccagtgtccgt 6065733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 546
Target Start/End: Complemental strand, 14134816 - 14134747
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    ||||| |||| |||||| ||| ||||| ||||||| |||| |||||| ||||||||| ||||||||||||    
T  14134816 atgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacat 14134747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 545
Target Start/End: Original strand, 20679336 - 20679405
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||| | |||||| |||| | || ||||||||||||||||||| |||| | ||||||||||||||    
T  20679336 aatgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgaca 20679405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 634
Target Start/End: Complemental strand, 27213599 - 27213518
Alignment:
Q  553 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggt 634  Q
    |||| ||| ||||| | ||||| ||||||||||||  |||||||||| ||||||  ||||| ||||||||||| ||||||||    
T  27213599 gacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 3951478 - 3951546
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| | |||| | ||||||| ||||| || ||||| |||| |||||||||||||||||||||    
T  3951478 atgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgaca 3951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 14134758 - 14134706
Alignment:
Q  546 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 598  Q
    |||||| |||||||| ||||| ||||||| ||||||||||||| |||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 556
Target Start/End: Original strand, 27067233 - 27067310
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 556  Q
    |||||||||| |||||| |||||||||||  || |||||||  ||||  ||||||||| |||||||||| ||||||||||    
T  27067233 atgaagcacggacactcctcggattagac--gttccggtgttcgacacatgtcgtgtccgacaccgacacgacactgaca 27067310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 625
Target Start/End: Complemental strand, 29776109 - 29776016
Alignment:
Q  530 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||| ||||| ||| | |||| |||||||||  ||||||||||| | ||||||||||| |||||||||| |||||||  ||||| | ||||||||    
T  29776109 gtgtccgacactgacttaacaccgacatataa--ttatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtc 29776016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 36450696 - 36450760
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 541  Q
    |||||||||  |||||| ||||||||| ||||||| ||||||||||| | |||||||| ||||||    
T  36450696 atgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacc 36450760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 544
Target Start/End: Complemental strand, 38079112 - 38079049
Alignment:
Q  481 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgac 544  Q
    |||||| ||||| ||| ||||| ||||| |||||||||||||||| |||||||| |||| ||||    
T  38079112 agcacggacacttttcagattatacgtggcccggtgtcggacatgcgtcgtgtccgacatcgac 38079049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 659
Target Start/End: Original strand, 43737875 - 43737926
Alignment:
Q  608 tgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||| || |||||||| |||||||||||||||| |||||| |||||||||    
T  43737875 tgtgtcggtgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcat 43737926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 126295 - 126357
Alignment:
Q  483 cacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||| |||||| ||||||||| ||||||||||| | ||||| |||||||||| ||||| ||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgaca 126357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 611
Target Start/End: Complemental strand, 4611614 - 4611528
Alignment:
Q  525 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtg 611  Q
    |||||||||| || |||||||   ||| || | ||| ||||| ||||||| |||| |||||||| ||||||||||||||||| ||||    
T  4611614 gtgtcgtgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 640
Target Start/End: Original strand, 25192363 - 25192441
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||||||||| |||| | ||| || |||||||||| ||||||  |||||||| ||||| || |||||| |||||||    
T  25192363 aattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgt 25192441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 481 - 523
Target Start/End: Complemental strand, 40064075 - 40064033
Alignment:
Q  481 agcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||| |||||| |||||||||| ||||||||||||||||||    
T  40064075 agcacggacactcctcggattagatgtgtcccggtgtcggaca 40064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 17751773 - 17751704
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 545  Q
    ||||||| || |||||| ||||||||| ||||||||||||||||  ||| ||| ||||| ||||||||||    
T  17751773 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgaca 17751704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 17760760 - 17760691
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 545  Q
    ||||||| || |||||| ||||||||| ||||||||||||||||  ||| ||| ||||| ||||||||||    
T  17760760 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgaca 17760691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 605
Target Start/End: Original strand, 18067956 - 18067993
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtc 605  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  18067956 actgaattatgtgattttctcaaattattagcggtgtc 18067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 18407836 - 18407779
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 534  Q
    |||||||||| |||||| ||  ||||| |||||||  |||||||||||||||||||||    
T  18407836 atgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtc 18407779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 659
Target Start/End: Original strand, 24413604 - 24413673
Alignment:
Q  590 aattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||| |||||||  | ||||||| |||||||| |||| |||||||||||  ||||| |||||||||    
T  24413604 aattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcat 24413673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 606
Target Start/End: Complemental strand, 9828172 - 9828043
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| |||| ||||||||| ||||||| |    
T  9828172 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaatta 9828073  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||||| || ||||||||| |||||||    
T  9828072 tgtgattttatcaaattattagtggtgtcg 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 642
Target Start/End: Complemental strand, 40917877 - 40917714
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| ||| || ||||||||| ||||||||||||||||||| ||||||||||  ||||||||| ||||| || |  |  ||||| ||| |||      
T  40917877 atgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat-- 40917780  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||||||||| || |||||||||| ||||||  ||||||||||||||||| ||||||||||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 606
Target Start/End: Complemental strand, 25362010 - 25361885
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| ||||||||||||||||  |||| ||||||||||||||||  |||||| |||||||||| |||||||||| ||| ||||| ||||||| |    
T  25362010 atgaagcacggacactcttcggattag--gtgttccggtgtcggacatgt--cgtgtccgacaccgacacgacactgacacatataattacactgaatta 25361915  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    |||||||||||| |||||| || |||||||    
T  25361914 tgtgattttctcaaattatcagtggtgtcg 25361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 1486646 - 1486822
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  |||||| ||||||||| ||||||||||||||||||| |||||||||      |||||| ||||| ||||  || ||||| ||||||| |    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaatta 1486739  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||| |||||   ||||||||||||||||| | |||||| |||||||  |||||  ||||||||    
T  1486740 tgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccgtatccatgcttcat 1486822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 502 - 613
Target Start/End: Original strand, 9629856 - 9629967
Alignment:
Q  502 agacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcgg 601  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||  || ||| | ||||||| || ||||||| || ||||||||||||    
T  9629856 agacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcgg 9629955  T
Q  602 tgtcgatgtgtc 613  Q
    ||||||||||||    
T  9629956 tgtcgatgtgtc 9629967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 47989625 - 47989444
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| ||||||||| |||| ||||||||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  47989625 atgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 47989526  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| |  ||||||||   ||||||  |||||||| || ||||| |||| ||| ||||||| ||||||  ||||||||    
T  47989525 tgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctgtatccatgcttcat 47989444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 495 - 659
Target Start/End: Complemental strand, 38503428 - 38503266
Alignment:
Q  495 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatta 594  Q
    |||||||||  ||||||| | ||| |||||||||| |||| |||  ||||| ||||| |||| ||| ||||| ||||||  || |||||||||| |||||    
T  38503428 tcggattaggtgtgtccctgcgtcagacatgtgtcatgtccgac--cgacaggacaccgacacatataattacactgaaatatatgattttctcaaatta 38503331  T
Q  595 ttagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||| ||||| ||| |||||||||||||| ||||||||||  ||||| |||| ||||    
T  38503330 ttagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccgtgcatcat 38503266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 638
Target Start/End: Complemental strand, 5944411 - 5944248
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||| | || ||||| ||||| ||||  || ||||| ||||||| |    
T  5944411 atgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaatta 5944312  T
Q  577 tgtga--ttttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    |||||  |||| || |||||||||| ||| ||  |||||||| || ||||| |||||| |||||    
T  5944311 tgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtcc 5944248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 31694641 - 31694823
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || |||||| ||||| ||||||||| | |||||| ||||| |||||||||| ||||| ||||  |  ||||||||||||| |    
T  31694641 atgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 31694740  T
Q  577 tgtga--ttttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||  |||| || ||||||||||  |||||| || ||||| ||  |||| |||||||||||||| |  ||||| |||||||||    
T  31694741 tgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgtgtccggtgtccgtatccgtatccgtgcttcat 31694823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 398781 - 398878
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||  |||||||| |||||||| ||||||||||||| ||  ||||| |||||||||    
T  398781 aattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcat 398878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 480 - 632
Target Start/End: Original strand, 5898211 - 5898352
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 579  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||          |||||  ||||| ||||||| ||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac---------gcatat--aattacactgaattatgt 5898299  T
Q  580 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    |||||| ||  ||||||||||||||||  || ||||| || ||||||||||||    
T  5898300 gattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccg 5898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 659
Target Start/End: Complemental strand, 34298479 - 34298382
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||| ||||||||||||| ||||||||| ||||||| ||||||||| |||||||| |||| ||||| ||||| |||||| ||| |||||    
T  34298479 aattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgtacgtgtctgtatcggtgtttcat 34298382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 625
Target Start/End: Original strand, 6414933 - 6415080
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||| | | ||||| ||||||| |||| |||||||||| |||| ||| ||||||| |||| ||  ||||| |||| || |    
T  6414933 atgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtatta 6415031  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    |||||||||||| ||| ||||||| |||||  |||||||| ||||||||    
T  6415032 tgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 513 - 625
Target Start/End: Original strand, 16252853 - 16252965
Alignment:
Q  513 ggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 612  Q
    |||||| ||||| |||||||||| |||||||| | ||||  ||| ||| ||||| |||||||||| | ||||||| ||||||||| |||||| ||||| |    
T  16252853 ggtgtcagacatatgtcgtgtctaacaccgacctaacacgaacacatataattacactgaatcatatcattttcttgaattattaacggtgttgatgtat 16252952  T
Q  613 cagtatccgtgtc 625  Q
    |||||||||||||    
T  16252953 cagtatccgtgtc 16252965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 488 - 659
Target Start/End: Original strand, 6612113 - 6612284
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 587  Q
    |||||| | ||||||| ||||||| |||||||||||  | ||||||| |||| ||||| ||||| ||||  |  ||||| ||||||| |||| ||||| |    
T  6612113 acactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaatttttt 6612212  T
Q  588 cgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    | |||||||| | || |||  |||||| | |||||||| |||||||||| |||||  |||||||||||||||    
T  6612213 caaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccgtatctgtgcttcat 6612284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 542 - 637
Target Start/End: Original strand, 20157346 - 20157441
Alignment:
Q  542 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    |||| ||||| |||| |||  |||| ||||||| |||||||||||||  ||||||||||||||||||||||||||  ||||||| |||||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtc 20157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 505 - 616
Target Start/End: Original strand, 27471525 - 27471636
Alignment:
Q  505 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    ||||||||||||||||||| ||||||| ||  ||||||| |||||||  ||| ||  ||||| ||||||| ||||| ||||||| ||||||||||||| |    
T  27471525 cgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtat 27471624  T
Q  605 cgatgtgtcagt 616  Q
    || |||||||||    
T  27471625 cggtgtgtcagt 27471636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 546 - 659
Target Start/End: Original strand, 2896121 - 2896234
Alignment:
Q  546 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatg 645  Q
    |||||| |||||||| |  || ||||||| ||||||||||||| |||||||||||||||||  |||||||| |||||||  |||||| ||||||||  ||    
T  2896121 tgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtgactg 2896220  T
Q  646 tatctgtgcttcat 659  Q
    |||| || ||||||    
T  2896221 tatccgttcttcat 2896234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 22515829 - 22515897
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||| |||||||||||| ||||||||||    
T  22515829 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgaca 22515897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 40258875 - 40258943
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||| | |||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  40258875 atgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgaca 40258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 556
Target Start/End: Complemental strand, 6427592 - 6427513
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 556  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||| |||||||||| ||| || ||| ||||||||||    
T  6427592 atgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgaca 6427513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 605
Target Start/End: Complemental strand, 34371843 - 34371714
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtc--ggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 574  Q
    ||||||||| |||||| || ||||| |||||||| |||| |   ||||| ||||||| || |||||| ||| ||||| |||| ||| ||||| |||||||    
T  34371843 atgaagcacaaacactttttggatttgacgtgtctcggtatattggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaat 34371744  T
Q  575 catgtgattttctcgaattattagcggtgtc 605  Q
     ||||||||||||| ||||||||||||||||    
T  34371743 tatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 568 - 642
Target Start/End: Original strand, 15641052 - 15641126
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||||||||||||||||||||  |||||||||| ||||||   ||||||| ||||||||||||||| |||||||||    
T  15641052 actgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgt 15641126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 491 - 545
Target Start/End: Original strand, 43492450 - 43492504
Alignment:
Q  491 ctcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  43492450 ctcttcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgaca 43492504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 659
Target Start/End: Original strand, 7918207 - 7918324
Alignment:
Q  542 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||| |||||||||| ||| ||||| ||||||| ||||||||||||| ||||||||| | ||||   |||||| | || ||||| |||||||||||| ||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatg 7918306  T
Q  642 tatgtatctgtgcttcat 659  Q
    | |||| | |||||||||    
T  7918307 tctgtaaccgtgcttcat 7918324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 616
Target Start/End: Original strand, 17831485 - 17831601
Alignment:
Q  498 gattagacgtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 596  Q
    |||||| |||||||||||||||||||  ||||| |||| ||||| |||| |||   |||| |||  |||| ||||||| ||||||||||||| |||||||    
T  17831485 gattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacgac---gacacatatgattacactgaataatgtgattttctcaaattatt 17831581  T
Q  597 agcggtgtcgatgtgtcagt 616  Q
    ||||||||||  ||||||||    
T  17831582 agcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 601
Target Start/End: Complemental strand, 44482311 - 44482234
Alignment:
Q  524 tgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcgg 601  Q
    ||||||||||| |||||||||| ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||| |||||    
T  44482311 tgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 1815362 - 1815306
Alignment:
Q  489 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||| || |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgaca 1815306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 653
Target Start/End: Complemental strand, 17754439 - 17754263
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||| | ||| ||  ||||  | |||||  ||||| ||| |||||  |||||||||  ||||||||| ||| | ||| ||||||| |    
T  17754439 atgaagcacgaacactccttggactatccgtgctctggtgttagacatatgttgtgtccaacaccgacaccacactgacacatatagttacactgaatta 17754340  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtg 653  Q
    ||| ||||| || ||||||||||||||||| ||||||||  || ||||| | | |||||| | ||| ||||||||||    
T  17754339 tgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgttcatgtttgtatctgtg 17754263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 38078603 - 38078671
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||| |||| ||||||||| ||||||| ||||| | |||||||||||||| ||||||||||    
T  38078603 atgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgaca 38078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 545
Target Start/End: Original strand, 29163321 - 29163391
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||||||||||  || |||||| |||||||||||||| | || |||||||||| ||||||||||    
T  29163321 caatgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgaca 29163391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 597
Target Start/End: Original strand, 16164257 - 16164366
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 587  Q
    |||||||||||||||| ||||||| ||||||||||| |||| | |||  ||||| ||| |||| ||||| ||| ||||| | | ||| |||||||||| |    
T  16164257 acactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgatttttt 16164356  T
Q  588 cgaattatta 597  Q
    | ||||||||    
T  16164357 caaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 37055872 - 37055968
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||| ||| |||| |||||||| |||||||||| || ||||||| ||||| || |||||||||||| ||| ||||| |||||| |||||||||    
T  37055872 aattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagtgtctgtgtcatgtccgatgttcgtgt-tgtatccgtgcttcat 37055968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 545
Target Start/End: Original strand, 42359390 - 42359459
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||   ||| |||| ||||||||||    
T  42359390 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgaca 42359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 543
Target Start/End: Complemental strand, 52284809 - 52284764
Alignment:
Q  498 gattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 543  Q
    |||||||||||||  |||||||||||||||||||||||||||||||    
T  52284809 gattagacgtgtcttggtgtcggacatgtgtcgtgtctgacaccga 52284764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 529
Target Start/End: Original strand, 9690215 - 9690267
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 529  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||| |||||    
T  9690215 atgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtc 9690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 625
Target Start/End: Original strand, 18556387 - 18556535
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||  ||||||||| |||||||| |||||||| | |||||| ||||||||||| || |||||  | |  |  ||||| | | ||| |    
T  18556387 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaatta 18556486  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    |||||| || || |||||||||| ||||||  |||||||| ||||||||    
T  18556487 tgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 606
Target Start/End: Original strand, 26238078 - 26238172
Alignment:
Q  508 gtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||| |||||||| |||| ||||| ||||||||||   |||||||| ||| | ||| ||||||| |||| |||||||| |||||||||||||||||    
T  26238078 gtcccggagtcggacacgtgttgtgtccgacaccgaca---cactgacacatata-ttacactgaattatgttattttctcaaattattagcggtgtcg 26238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 46348325 - 46348393
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||| | |||||| || |||||| |||||||||||| |||||||||| ||||||||||    
T  46348325 atgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 46348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 51410142 - 51410074
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||| | |||||||||| ||||||||||    
T  51410142 atgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgaca 51410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 571 - 658
Target Start/End: Complemental strand, 9709854 - 9709767
Alignment:
Q  571 gaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttca 658  Q
    |||| ||||||||||||| ||||||||||||||| |   ||||||| |||||||| |||| | ||||| ||| |||||| ||||||||    
T  9709854 gaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatgtctgtatccgtgcttca 9709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 640
Target Start/End: Original strand, 10572572 - 10572683
Alignment:
Q  529 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 628  Q
    |||| |||||||| |||  |||| |||| ||  ||||| || |||| ||||||||||||| ||||||||| |||||||  |||||||| | | |||| ||    
T  10572572 cgtgcctgacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtg 10572671  T
Q  629 tccggtgtccgt 640  Q
    ||||||||||||    
T  10572672 tccggtgtccgt 10572683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 477 - 632
Target Start/End: Complemental strand, 36906124 - 36905970
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||||| | |||||  ||||||| ||||| |||  | |||||||| ||||| ||||  || |  ||| ||| |||||  |||||| |    
T  36906124 atgaagcacggacactctt-gcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacacaacgccaacacatataattactctgaatta 36906026  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||||||||||||  |||||||||||||| | ||||||||| ||| || ||||||||    
T  36906025 tgtgattttctcagattattagcggtgttggtgtgtcagtgtccttgacatgtccg 36905970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 640
Target Start/End: Complemental strand, 1262927 - 1262849
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||| ||||| ||||||||||||| |||||||||| ||||||  ||||| || | |||||| |||||||| |||||    
T  1262927 aattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgt 1262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 519
Target Start/End: Original strand, 22881569 - 22881611
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcg 519  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  22881569 atgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 587
Target Start/End: Complemental strand, 25934744 - 25934634
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | |||| || ||| |||| ||||| |||| |||||||||| |||||||||| || || |||| ||| ||||| |||| ||      
T  25934744 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattt 25934645  T
Q  577 tgtgattttct 587  Q
    |||||||||||    
T  25934644 tgtgattttct 25934634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 29144322 - 29144368
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||    
T  29144322 atgaagcacggacactcttcggattaggcgtgttccggtgtcggaca 29144368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 36878504 - 36878450
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||||||    
T  36878504 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 46940750 - 46940796
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  46940750 atgaagcacgaacactcctcggattaggcgtgttccggtgtcggaca 46940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 623
Target Start/End: Original strand, 12443476 - 12443537
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 623  Q
    ||||| ||||||| ||||||||||||| |||||||||| ||||||  ||||| |||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 16297299 - 16297396
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| |||||||  ||||||||| ||  |||||| || ||||||| |||||||||||||| || |||||| ||||| |||  ||||| |||||||||    
T  16297299 aattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgcttcat 16297396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 629
Target Start/End: Complemental strand, 16812580 - 16812519
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgt 629  Q
    ||||||| |||||||||| || ||||||||  ||||||| ||||||||| ||||||||||||    
T  16812580 actgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtcatgt 16812519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 530
Target Start/End: Complemental strand, 17778670 - 17778617
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg 530  Q
    ||||||||||||||||  ||||||||| | ||||||||||||||||| ||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg 17778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 18190061 - 18190118
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||| |||||||||  |||||||||||||||||| |||| |||||||||| |||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgaca 18190118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 34741963 - 34741899
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatg-tgtcgtgtctgacacc 541  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||| | ||||||||| ||||||    
T  34741963 atgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagacacc 34741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 633
Target Start/End: Original strand, 5376483 - 5376587
Alignment:
Q  529 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 628  Q
    |||||| |||| ||||| ||||| ||||  |  ||||| ||||||| |||| |||||||  |||||||||||||||||  |||| ||| |||||||| ||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtg 5376582  T
Q  629 tccgg 633  Q
    |||||    
T  5376583 tccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 556
Target Start/End: Complemental strand, 15765875 - 15765795
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgaca 556  Q
    |||||||||| |||||||||||||||| |||||||| ||||| ||||   ||| |  ||||||||||||| ||||||||||    
T  15765875 atgaagcacggacactcttcggattaggcgtgtcccagtgtcagacacacgtcggcatctgacaccgacaagacactgaca 15765795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 541  Q
    |||||||||| |||||| ||||||||| ||||||| |||||||||||   |||||||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 33203020 - 33202956
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 541  Q
    |||||||||  | |||| ||||||||| |||||| |||||||||| |||| ||||||||||||||    
T  33203020 atgaagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 623
Target Start/End: Complemental strand, 40181976 - 40181855
Alignment:
Q  489 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctc 588  Q
    ||||| ||||||||| ||||||||||||| ||||| |||| ||||| |||||||| |         |||||||  ||| ||||||| |||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgata---------catataa--ttacactgaattatgtgattttctc 40181888  T
Q  589 gaattattagcggtgtcgatgtgtcagtatccgtg 623  Q
     |||||||||| |||||  |||||| |||||||||    
T  40181887 aaattattagcagtgtc--tgtgtccgtatccgtg 40181855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 619
Target Start/End: Original strand, 48147967 - 48148111
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    |||||||||| | |||||||  |||||| ||||||||||||||  ||||  |||||||  || | | ||| ||||| |||||||| ||||| |||||||     
T  48147967 aatgaagcacaaccactctttagattaggcgtgtcccggtgtcatacatacgtcgtgttcgatatcaacacgacaccgacatatataattacactgaatt 48148066  T
Q  576 atgtga-ttttctcgaattattagcggtgtcgatgtgtcagtatc 619  Q
    || ||| |||| |  |||||||||||||||| |  ||||||||||    
T  48148067 atatgatttttttaaaattattagcggtgtcaacatgtcagtatc 48148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 602
Target Start/End: Complemental strand, 21038161 - 21038086
Alignment:
Q  527 gtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggt 602  Q
    |||||||| |||||||||| |||||||||  |||  |||| ||||||| |||| |||||||  |||||||||||||    
T  21038161 gtcgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagcggt 21038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 632
Target Start/End: Complemental strand, 6427385 - 6427323
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||||| ||||||||||||| ||||||||||||||| |  |||||||| |||||| | ||||||    
T  6427385 tgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 659
Target Start/End: Original strand, 10577766 - 10577848
Alignment:
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||  ||  |||||| ||||||  ||||| || |||||||| ||||||||||||||||  ||||| |||||||||    
T  10577766 tgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 10577848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 13011231 - 13011329
Alignment:
Q  562 aattatactgaatcatgtgattttct-cgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||| ||| |||||||||| | | |||||||||| ||||||   ||||||| | |||||| ||| |||||||||||| ||||||||| ||||||    
T  13011231 aattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgtgtctgtatctgttcttcat 13011329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 554 - 604
Target Start/End: Complemental strand, 28674851 - 28674801
Alignment:
Q  554 acatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    ||||||| ||||||||||||| |||| |||||||| |||||||| ||||||    
T  28674851 acatatataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 52903363 - 52903317
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||| |||||||||| || || |||||||||||||||||||    
T  52903363 atgaagcacggacactcttcgaataagccgtgtcccggtgtcggaca 52903317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 625
Target Start/End: Complemental strand, 2851058 - 2851002
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||||| |||| ||||| || ||||||||||||||| || |||||||||||||||||    
T  2851058 actgaattatgtaattttatcaaattattagcggtgt-gacgtgtcagtatccgtgtc 2851002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 12919062 - 12919005
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 534  Q
    ||||||||||||||||  |||||| || |||||||| ||||| |||| ||||||||||    
T  12919062 atgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtc 12919005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 566
Target Start/End: Complemental strand, 17408819 - 17408730
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatta 566  Q
    |||||||||  ||||||||| ||||||  || ||  ||||||||||| ||||||||||||| ||| |||  |||| |||||||| |||||    
T  17408819 atgaagcacagacactcttcagattaggtgtatcttggtgtcggacacgtgtcgtgtctgataccaacacaacaccgacatatataatta 17408730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 545
Target Start/End: Complemental strand, 19637890 - 19637817
Alignment:
Q  472 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||| |||| |||| || |||| |||||||||  | |||||||||||||| |||| ||||||| ||||||||||    
T  19637890 tatctatgatgcacaaatactcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgaca 19637817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 27965942 - 27966011
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    |||||||| | |||||| ||||||||| |||||||||||||| | || | | |||||||||||| |||||    
T  27965942 atgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacggacat 27966011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 4e-37; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 477 - 616
Target Start/End: Complemental strand, 32308248 - 32308109
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||| |||||||| |||||||||  ||||| |||||||||||||||||||||||  ||||||||| |||||||||| ||| ||||| ||||||| |    
T  32308248 atgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaatta 32308149  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||||||||||| |||||||||||||||||  ||||||||    
T  32308148 tgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 477 - 640
Target Start/End: Complemental strand, 24339770 - 24339607
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||  ||||| ||||||||| ||||||||||||||||| | |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  24339770 atgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 24339671  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||||| || |||||||||| ||||||  |||||| | ||| |||| ||||||||||||||    
T  24339670 tgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgt 24339607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 477 - 642
Target Start/End: Complemental strand, 598325 - 598171
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||     || |||      |||| | | ||| |    
T  598325 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgaca-----cttaca------attacatttaatta 598237  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
     ||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  598236 cgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgtgt 598171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 548 - 659
Target Start/End: Complemental strand, 17851488 - 17851377
Alignment:
Q  548 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgta 647  Q
    |||| |||| ||| ||||| ||||||| ||||||||||||  ||||||||||||| |||||||||| |||||| |||| |||||||||||||||| ||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgta 17851389  T
Q  648 tctgtgcttcat 659  Q
    || |||||||||    
T  17851388 tccgtgcttcat 17851377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 1433576 - 1433400
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||  |||| |||| |||||      ||||| |||| ||| ||||| ||  ||| |    
T  1433576 atgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac------gacaccgacacatataattacaccaaatga 1433483  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||| |||||||| ||||||||  |||||| | |||||||| ||| |||||||||||   ||||| |||||||||    
T  1433482 tgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcat 1433400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 659
Target Start/End: Original strand, 26329354 - 26329495
Alignment:
Q  518 cggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagta 617  Q
    |||||| ||||||||||||||||||||| ||| | |||| ||| ||||| |||||||  |||| ||||||| |||||||| || |||||  ||||||||     
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtg 26329453  T
Q  618 tccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    || ||||| ||||| |||||||||| |||||  |||||||||    
T  26329454 tctgtgtcgtgtccagtgtccgtgtctgtattcgtgcttcat 26329495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 5409773 - 5409949
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||      |||||| ||||| ||||  |  ||||  ||||||| |    
T  5409773 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttgtaattgcactgaatta 5409866  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||| || ||   |||||||| ||| |||| | ||||||||| |||| |||||| |||||||||    
T  5409867 tgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatccgtgcttcat 5409949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 641
Target Start/End: Complemental strand, 19206157 - 19206014
Alignment:
Q  498 gattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatta 597  Q
    |||||| ||| | |||||||| || ||||||| | ||||||||| ||| ||||| |||| ||| ||||||| ||||| ||||||||||||| ||||||||    
T  19206157 gattagccgtattccggtgtcagatatgtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattatta 19206058  T
Q  598 gcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||||||||  ||||  || |||||||| |||| ||| ||||||    
T  19206057 gcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtg 19206014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 639
Target Start/End: Original strand, 43027406 - 43027562
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||      ||||| ||||  |  | ||| |||| || |    
T  43027406 atgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac------gacaccgacacttgtatttacactgcatta 43027499  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccg 639  Q
    ||||||||| || |||||||||| | ||||  |||||||| |||||||| ||||| |||||||    
T  43027500 tgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccg 43027562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 9778622 - 9778454
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | ||||||| ||||||||||||||||||| |||| ||||      |||||| ||||| ||||  |  ||||||||||||| |    
T  9778622 atgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt------ccgacacgacaccgacacttgtaattatactgaatta 9778529  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||| |||        ||||||||| |||||||| ||||||||||||||||  ||||| |||||||||    
T  9778528 tgtgattttttcaaattatcagc--------tgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 9778454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 606
Target Start/End: Complemental strand, 7438834 - 7438705
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | | ||||| |||||||  |||||| ||||||||||||| ||||||||||||||||| ||||  |  ||||| | ||||| |    
T  7438834 atgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaatta 7438735  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||||| || |||||||| | ||||||    
T  7438734 tgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 598
Target Start/End: Original strand, 11665371 - 11665492
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| ||| || ||| |||||| ||||  |||||||||||| |||||||||  |||||||||||||||  ||||  || ||||| ||||||| |    
T  11665371 atgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatta 11665470  T
Q  577 tgtgattttctcgaattattag 598  Q
    ||||||||| || |||||||||    
T  11665471 tgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 474 - 599
Target Start/End: Original strand, 26033389 - 26033514
Alignment:
Q  474 tcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaa 573  Q
    |||||||| |||| |||||| |||||||||  ||||| |||| ||||||| ||||| ||||||||||||||| || || ||||  |  ||||| ||||||    
T  26033389 tcaatgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaa 26033488  T
Q  574 tcatgtgattttctcgaattattagc 599  Q
    | |||||||||| || ||||||||||    
T  26033489 ttatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 15680926 - 15680858
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| ||| |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  15680926 atgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 15680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 21880269 - 21880201
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  21880269 atgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgaca 21880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 33994329 - 33994261
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||| ||||||||||| | ||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  33994329 atgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgaca 33994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 552
Target Start/End: Complemental strand, 21831903 - 21831828
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacact 552  Q
    |||||||| ||||||||||  |||||||| |||| || ||||| ||||||||||||| ||||||||||||||||||    
T  21831903 atgaagcatgaacactcttaagattagacttgtctcgatgtcgcacatgtgtcgtgtttgacaccgacatgacact 21831828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 637
Target Start/End: Complemental strand, 26733347 - 26733272
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||| |||||||| |||||||| |||| ||||||    
T  26733347 aattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtc 26733272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 640
Target Start/End: Complemental strand, 27945084 - 27945006
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||| ||||||| |||| |||||||| ||||||||| |||||||  |||||||| |||||||| ||||||||||||||    
T  27945084 aattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 27945006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 659
Target Start/End: Complemental strand, 5236049 - 5235932
Alignment:
Q  542 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||| ||||| || ||||| ||||| ||| ||| || | |||||||  |||||||||||||||||| |||||||| || ||||| |||||  |||||||     
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgta 5235950  T
Q  642 tatgtatctgtgcttcat 659  Q
    | ||||||||||||||||    
T  5235949 tttgtatctgtgcttcat 5235932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 476 - 616
Target Start/End: Original strand, 9408264 - 9408404
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    ||||||||||| ||| |||||||||||| |||||   ||||||||| || | |||||||||||||||| | ||||| ||||  |  ||||| ||| |||     
T  9408264 aatgaagcacggacattcttcggattaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaatt 9408363  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||||||||| || ||||||||   |||||| |||||||||    
T  9408364 atgtgattttttcaaattattaattgtgtcggtgtgtcagt 9408404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 569 - 641
Target Start/End: Original strand, 11722121 - 11722193
Alignment:
Q  569 ctgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||||| ||||||||||||| |||| ||||||||||||  |||||||| |||||||| |||||||| ||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 11722193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 616
Target Start/End: Complemental strand, 20549908 - 20549780
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||  ||||| ||||||||| |||||| |  |||||||||||||| ||||| ||||||||||         |||||||  ||| ||||||| |    
T  20549908 atgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgaca---------catataa--ttacactgaatta 20549820  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
     ||||||||||| ||||||||||||||||| |||||||||    
T  20549819 cgtgattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 21864925 - 21864857
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||  |||||| ||| ||||||||||||||||||||||||| |||||||||| |||| |||||    
T  21864925 atgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgaca 21864857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 540
Target Start/End: Original strand, 32093956 - 32094020
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgt-cccggtgtcggacatgtgtcgtgtctgacac 540  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||| |||||    
T  32093956 atgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 659
Target Start/End: Complemental strand, 1885577 - 1885519
Alignment:
Q  601 gtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| |||||| |||||||||    
T  1885577 gtgtcgatgtgtccgtatcagtgtcgtgtccggtgtccgtgtctgtatccgtgcttcat 1885519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 568 - 661
Target Start/End: Original strand, 21141004 - 21141097
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcatta 661  Q
    ||||||| || |||||||||  ||||||||| |||||||| ||||| |  |||||||| ||| ||||||||||||  ||||| |||||||||||    
T  21141004 actgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcatta 21141097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 625
Target Start/End: Complemental strand, 22484142 - 22484005
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||  |||||| |||| |||| || ||||||||||||||| ||||||||||||||         ||||||  ||||||||||||| |    
T  22484142 atgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgac---------acatat--aattatactgaatta 22484054  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||  |||||||  |||||||||||||||||  |||||||| || |||||    
T  22484053 tgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 659
Target Start/End: Complemental strand, 30731080 - 30730983
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||| ||||||||||||| ||||||| |||||||||  ||| || | |  ||||| |||| |||||||||||  |||||||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcat 30730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 585
Target Start/End: Complemental strand, 2334377 - 2334270
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||| |||| |||||| |||||||||||||||  | ||||||||||||||||||||| |||| ||||| ||||| ||||  |  ||||| ||| ||| |    
T  2334377 atgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaatta 2334279  T
Q  577 tgtgatttt 585  Q
    |||||||||    
T  2334278 tgtgatttt 2334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 540
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| |||| ||||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 32287405 - 32287473
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||  |||| |||| ||||||||||    
T  32287405 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgaca 32287473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 499 - 546
Target Start/End: Original strand, 7973087 - 7973134
Alignment:
Q  499 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  7973087 attagacgtgtcccgatgtcggacatgtgtcgtgtctcacaccaacat 7973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 656
Target Start/End: Complemental strand, 9933364 - 9933224
Alignment:
Q  514 gtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 613  Q
    ||||| ||||||||||||||| |||||||||| |||||||||| ||  || | |||||||  |||||||||| || |||||||||   ||| || |||||    
T  9933364 gtgtcagacatgtgtcgtgtccgacaccgacacgacactgacacat--aagtttactgaaatatgtgattttttcaaattattagtaatgttgacgtgtc 9933267  T
Q  614 agtatccgtgtcatgtccggtgtccgtgtatgtatctgtgctt 656  Q
    | | |||| ||| |||| | | ||||||| ||||||| |||||    
T  9933266 aatttccgcgtcgtgtctgatatccgtgtctgtatctatgctt 9933224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 505 - 632
Target Start/End: Complemental strand, 15902922 - 15902795
Alignment:
Q  505 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    ||||||| ||| |||| ||||||||||||| || |||||||  |||| |||| ||| ||||| ||| ||| |||||||||| || ||||||||  |||||    
T  15902922 cgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgt 15902823  T
Q  605 cgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||   ||||||| || ||||| ||||||    
T  15902822 cggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 562 - 641
Target Start/End: Complemental strand, 43250036 - 43249957
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    ||||| |||| || |||| |||||||| |||||||| | ||||||  |||||||| |||||||| |||||||||||||||    
T  43250036 aattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgtg 43249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 531
Target Start/End: Complemental strand, 10043041 - 10043007
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgt 531  Q
    |||||||||||||||||||||||||||||||||||    
T  10043041 ggattagacgtgtcccggtgtcggacatgtgtcgt 10043007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 529
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 529  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 3554448 - 3554517
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    |||||||||  |||||||||| |||||||||||| | ||||  || |||||||||||| |||||||||||    
T  3554448 atgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacat 3554517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 542
Target Start/End: Complemental strand, 8234243 - 8234198
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccg 542  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 631
Target Start/End: Original strand, 8842318 - 8842420
Alignment:
Q  525 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgt 624  Q
    ||||||||||  ||||||||| |||||||||| |||    || || |||||||||||||||||| |||| ||||| |||||| ||| | ||| |||||||    
T  8842318 gtgtcgtgtccaacaccgacaagacactgacacata----tacacagaatcatgtgattttctcaaattcttagcagtgtcggtgtattagtgtccgtgt 8842413  T
Q  625 catgtcc 631  Q
    | |||||    
T  8842414 cgtgtcc 8842420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 20545186 - 20545242
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||||||||  |||||| ||| |||| ||||||||| ||||||||||||||||||||    
T  20545186 atgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgt 20545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 606
Target Start/End: Original strand, 29787385 - 29787429
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 606  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  29787385 aattacactgaattatgtgattttctcaaattattagcggtgtcg 29787429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 638
Target Start/End: Original strand, 36297369 - 36297436
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    ||||| ||||||||||||  |||||||||| ||||||| |||||| | |||||||| ||||||||||||    
T  36297369 tgaattatgtgattttcttaaattattagccgtgtcga-gtgtcaatgtccgtgtcgtgtccggtgtcc 36297436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 3294257 - 3294300
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgt 531  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||    
T  3294257 acactcttcggattaggcgtgtcccggtgttggacacgtgtcgt 3294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 622
Target Start/End: Complemental strand, 9482992 - 9482917
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 622  Q
    ||||| |||| ||| ||||| |||||||  |||||||||||| |||||| |||| ||||| ||||||||| |||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 540
Target Start/End: Original strand, 2533761 - 2533823
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    |||||||||||||||| ||||||||  |||||||||| |||||| | |||| |||||| ||||    
T  2533761 tgaagcacgaacactcctcggattacgcgtgtcccggcgtcggatacgtgttgtgtcttacac 2533823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 625
Target Start/End: Complemental strand, 3721151 - 3721074
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||| |||| ||| ||||||||| ||| ||||||||||||| ||||||||||  ||||||  ||||||| ||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttctcaaattattagc-atgtcgaaatgtcagtgtccgtgtc 3721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 6490833 - 6490787
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||| |||||| ||||||||  |||||||||||||||||||    
T  6490833 atgaagcacggacactcctcggattaagcgtgtcccggtgtcggaca 6490787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 10359716 - 10359670
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  10359716 atgaagcacggacacctttcggattagacgtgtctcggtgtcggaca 10359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 550 - 616
Target Start/End: Complemental strand, 22868097 - 22868031
Alignment:
Q  550 actgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    ||||||| ||| ||||| ||||||| |||||||||||||  |||||||| |||||||  ||||||||    
T  22868097 actgacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 632
Target Start/End: Complemental strand, 24105721 - 24105651
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||||| |||||||||||  ||||| || |||||||||| ||||||  |||||||| |||||||| ||||||    
T  24105721 aattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 24105795 - 24105749
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  24105795 atgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggaca 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 40131941 - 40131987
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||  |||||| |||||||||||||||||| ||||||||||    
T  40131941 atgaagcacagacactcctcggattagacgtgtccctgtgtcggaca 40131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 640
Target Start/End: Original strand, 48246773 - 48246907
Alignment:
Q  506 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 605  Q
    |||||||  |||||||||||||||||||| ||||  |||||||||| |   |||| ||||| | ||| |  |||||||||||| ||||| || | |||||    
T  48246773 gtgtcccaatgtcggacatgtgtcgtgtccgacattgacatgacaccggtttatataattacattgagttgtgtgattttctcaaattaataacagtgtc 48246872  T
Q  606 gatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    || |||||| | || ||||| ||| | ||||||||    
T  48246873 gacgtgtcattgtctgtgtcgtgttctgtgtccgt 48246907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 637
Target Start/End: Original strand, 2425763 - 2425824
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    ||||||||||||| |||||||| ||||| ||  ||||||||||| ||||| ||||| |||||    
T  2425763 atgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtc 2425824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 581 - 638
Target Start/End: Original strand, 31808544 - 31808600
Alignment:
Q  581 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    |||||||| |||||||| ||||| ||| |||||||| | |||||||||||||||||||    
T  31808544 attttctcaaattattatcggtg-cgacgtgtcagtgttcgtgtcatgtccggtgtcc 31808600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 42720891 - 42720960
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||||||||| ||| ||||| | | ||| |||||||||| || |||||||||||||||| | ||||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagt 42720960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 582 - 631
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  582 ttttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtcc 631  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||| |||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 477 - 661
Target Start/End: Original strand, 30982809 - 30982990
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||  || ||||| ||||||  |    
T  30982809 atgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaata 30982908  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcatta 661  Q
    |||||||||||| ||| |||||||||| |   ||||| || |||||||| | |||||||||| |||  ||||| |||||||||||    
T  30982909 tgtgattttctcaaatcattagcggtggc---gtgtctgtgtccgtgtcgtatccggtgtccatgttcgtatccgtgcttcatta 30982990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 23292928 - 23293099
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||||         | | |||  ||||||||||| |    
T  23292928 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca---------cttgtaa--ttatactgaatta 23293016  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||| || |||||||||| ||||||  |||||| | |||||||| ||||||||||||||||  |||||||||||||||    
T  23293017 tgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcat 23293099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 642
Target Start/End: Complemental strand, 36635447 - 36635287
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||  ||||||||||||||||     | ||||  ||| ||| ||||| ||||||| |    
T  36635447 atgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac-----tcacacgaacacatataattacactgaatta 36635353  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    |||||||||||| ||||||||| ||||| |  |||||||| |||| ||| ||||||||||| ||||    
T  36635352 tgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgt 36635287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 477 - 613
Target Start/End: Original strand, 24613632 - 24613768
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||  |  | ||| | ||||| |    
T  24613632 atgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaatta 24613731  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtc 613  Q
    |||||||||||| |||||||||  ||||||| |||||    
T  24613732 tgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 22234821 - 22234951
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||  |||||||||  |||||| ||||||||||| |||||||||| |||||||||| ||||| |||| ||| ||||| ||||||| |    
T  22234821 atgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaatta 22234920  T
Q  577 tgtga-ttttctcgaattattagcggtgtcg 606  Q
    ||||| |||| || |||| ||||||||||||    
T  22234921 tgtgatttttttcaaatttttagcggtgtcg 22234951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 497 - 659
Target Start/End: Complemental strand, 904030 - 903868
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 596  Q
    |||||||| ||||||| ||||||||||  |||||||||  ||||||| | || ||||| | ||| ||||| ||||||| ||||||||||||| |||||||    
T  904030 ggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattatt 903931  T
Q  597 agcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    | ||||| || ||||||||| ||||| | ||||| || | ||||||  ||||| |||||||||    
T  903930 aacggtgccggtgtgtcagtgtccgttttatgtctggcgcccgtgtccgtatccgtgcttcat 903868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 19482796 - 19482614
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||| |||||||||  ||||||| |||||||||| ||||||||||  | ||||||| |||||  |||  |  ||||| || |||| |    
T  19482796 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaatta 19482697  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||| || || |||||||||  ||||||  |||||||| || ||||| |||| |||||| ||||  ||||| |||||||||    
T  19482696 tgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccgtgcttcat 19482614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 614
Target Start/End: Complemental strand, 47264114 - 47263977
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  || ||||||||||||| ||||||| |||||| |||||||||||| ||||||||| ||||||||  ||||| |  ||||| || |||| |    
T  47264114 atgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaatta 47264015  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtca 614  Q
    |||||||||  | ||||||||||  |||||| ||||||    
T  47264014 tgtgatttttacaaattattagctatgtcgacgtgtca 47263977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 24343630 - 24343453
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    |||||||||| |||||| || || ||| ||||||||||||||||||| | |||| |||| |||||||||| |||||       || ||||| |||||||     
T  24343630 atgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacc------tataattacactgaatt 24343537  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||| |||||||| |||||||| | ||||||  ||||| |  |||||||| |||||||||||||||| ||| || |||||||||    
T  24343536 atgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcat 24343453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 29205591 - 29205528
Alignment:
Q  471 ttatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 534  Q
    ||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  29205591 ttatctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 44081509 - 44081690
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||||||||||||| |||||||| |||| | |||||| ||| ||||||||| ||| |  |||| | |||||||| ||| ||||| | | ||| |    
T  44081509 atgaagcacgaacactcttcagattagacatgtctcagtgtcgaacacgtgtcgtgtttgata-tgacacggcactgacacatataattacattaaatta 44081607  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    | ||||||| || |||||||| || | ||| ||||||||| ||| |||| |||||| ||| |||||  ||||| |||||||||    
T  44081608 tatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggtgcttcat 44081690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 658
Target Start/End: Complemental strand, 848079 - 847898
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||| |||| |||||| | |||||||  ||||||||||||  |||| || ||||||| |||||| ||| ||||| ||||  |  ||||||| ||||| |    
T  848079 atgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatta 847980  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttca 658  Q
    ||| |||||||| ||||||||||||  |||  |||||||| || ||||| ||||||| |||| |||  ||||| ||||||||    
T  847979 tgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgtatccgtgcttca 847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 12797282 - 12797348
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||| || ||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgaca 12797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 477 - 615
Target Start/End: Original strand, 23861371 - 23861500
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||||| | ||||| ||||||  |||| | |||||||||||| ||||||||||||         ||||||| ||||| | |||||||    
T  23861371 atgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgac---------acatatataattacattgaatca 23861461  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcag 615  Q
    ||||||||| || | ||||||||||||||| ||| ||||    
T  23861462 tgtgattttatcaatttattagcggtgtcggtgtttcag 23861500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 638
Target Start/End: Original strand, 5414103 - 5414264
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | |||| ||  ||||||| ||||| |||| |||||||||| ||||| |||| ||||| || | ||| ||||| |||| ||      
T  5414103 atgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattt 5414202  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    |||||||||||  ||  |||||| ||||||  ||||| || |||||||| ||||||||||||    
T  5414203 tgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtcc 5414264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 625
Target Start/End: Original strand, 30522858 - 30522994
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 587  Q
    |||||||| |||||||||||||| ||||||| || ||||||||||| |||| ||||   ||| |  ||||||| | ||| ||||||| ||||||||||||    
T  30522858 acactctttggattagacgtgtctcggtgtcagatatgtgtcgtgtttgacgccgatccgac-ccaacatatatagttacactgaattatgtgattttct 30522956  T
Q  588 cgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    | ||| |||||||||||    || ||||||||||||||    
T  30522957 caaataattagcggtgtgagcgtatcagtatccgtgtc 30522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 629
Target Start/End: Original strand, 38148656 - 38148808
Alignment:
Q  477 atgaagcacgaacact-cttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    |||||| ||||||||| ||||| || || ||||| || ||||| || | ||||||||||  ||||| ||| ||||  ||||| |||||||| |||||||     
T  38148656 atgaagtacgaacacttcttcgaat-aggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaatt 38148754  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgt 629  Q
    ||||||||||||| || |||||||||||||||  ||||| | |||| |||||||    
T  38148755 atgtgattttctcaaactattagcggtgtcgaaatgtcattgtccgcgtcatgt 38148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 715547 - 715603
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  715547 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 752873 - 752929
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  752873 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 12895216 - 12895284
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||| |  ||||||||| ||||||||||    
T  12895216 atgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgaca 12895284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 585
Target Start/End: Complemental strand, 19312463 - 19312355
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||| |||| |||||  || ||||||||||||| |||||||||||| ||||||| || |||| ||||| ||||| || |  || ||||| |||||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  577 tgtgatttt 585  Q
    |||||||||    
T  19312363 tgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 34306746 - 34306814
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||||| || || |||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  34306746 atgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 34306814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 540
Target Start/End: Original strand, 14465007 - 14465070
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    |||||||||| |||||| || ||||||||||||||| |||||| ||| ||||||||||||||||    
T  14465007 atgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 3947703 - 3947826
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||||||  |||||| ||||||||||| |||||||||      |||||| ||||||||||  |  ||||| ||||||| |    
T  3947703 atgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgt------ccgacacgacactgacacttgtaattacactgaatta 3947796  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    || |||||| || |||||||||| ||||||    
T  3947797 tgcgattttttcaaattattagctgtgtcg 3947826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 612
Target Start/End: Original strand, 5832638 - 5832760
Alignment:
Q  490 actcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcg 589  Q
    |||| ||||||||||||||||   |||||||||  |||||||||||||| | ||||  ||||  ||| | | || |||||| |||||| ||||||||||     
T  5832638 actcatcggattagacgtgtcttagtgtcggactcgtgtcgtgtctgacgcagacactacaccaacacaaataactatactaaatcatatgattttctca 5832737  T
Q  590 aattattagcggtgtcgatgtgt 612  Q
    |||||||||| ||||||| ||||    
T  5832738 aattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 525 - 622
Target Start/End: Complemental strand, 4383447 - 4383351
Alignment:
Q  525 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 622  Q
    ||||||||| ||||||||||| ||||||||||| |  ||||| ||||||| |||||||||| || |||||||||  || |||| |||||||| |||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 655
Target Start/End: Complemental strand, 13783324 - 13783231
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 655  Q
    ||||| |||||||  |||||| ||||| ||| ||||||||||||| ||||||||| |||||||||| |  | ||||||||| |||||| |||||    
T  13783324 aattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtcatttgagatgtccgtgtctgtatccgtgct 13783231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 590 - 659
Target Start/End: Complemental strand, 20633500 - 20633431
Alignment:
Q  590 aattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||||||||| |||||||| ||||| || |||| |||||||||||  ||||| |||||||||    
T  20633500 aattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcat 20633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 630
Target Start/End: Original strand, 22440616 - 22440684
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 630  Q
    ||||| ||||||| ||||||||||||| |||||||| |||||||||||| ||||| ||| |||| ||||    
T  22440616 aattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtc 22440684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 655
Target Start/End: Original strand, 27706110 - 27706286
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 578  Q
    |||||||| ||| || || |||||| ||||||||||| ||||| | |||||||||| ||||   ||| |||||| |||  |  ||||| ||| ||| |||    
T  27706110 gaagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatg 27706209  T
Q  579 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 655  Q
    ||||||| |  ||||||||   ||||||| |||||||| ||| |||| |||| |||||||||||  ||||| |||||    
T  27706210 tgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 28964190 - 28964258
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||| | |||||| ||||||||| |||||||| |||||||| |||||||||||| ||||| ||||    
T  28964190 atgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagaca 28964258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 35157927 - 35157995
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||  ||||||||  ||||| ||||||| |||||||||||||||| ||||||||||    
T  35157927 atgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgaca 35157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 606
Target Start/End: Original strand, 8423719 - 8423778
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 606  Q
    ||||| ||||| || ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  8423719 gacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 20743210 - 20743277
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 545  Q
    |||||||| |||||| |||||||||| |||| ||||||||||||| ||||| |||||||||| |||||    
T  20743210 gaagcacggacactcatcggattagatgtgttccggtgtcggacacgtgtcggtgtctgacatcgaca 20743277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 562 - 641
Target Start/End: Complemental strand, 21945546 - 21945467
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    ||||| ||||||| |||| ||||| || |||||||||| ||||||   ||||||| || |||||||||||||||||||||    
T  21945546 aattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtg 21945467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 576 - 659
Target Start/End: Complemental strand, 33950165 - 33950082
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||||||| |||||||||||| || || |||||||| | ||||| ||||| |||||||||||  ||| | |||||||||    
T  33950165 atgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgtctggtgtccgtgttcgtacccgtgcttcat 33950082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 545
Target Start/End: Complemental strand, 4157268 - 4157198
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||  |||||| ||| |||||  || || ||||||||||||||||||||||| ||||||||||    
T  4157268 caatgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 545
Target Start/End: Complemental strand, 4157555 - 4157485
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||   |||||| ||| ||||| ||| || ||||||||||||||||||||||| ||||||||||    
T  4157555 caatgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 638
Target Start/End: Original strand, 5775353 - 5775452
Alignment:
Q  541 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagta---tccgtgtcatgtccggtgtc 637  Q
    ||||||||||| |||| ||| ||||| ||| ||| ||||||||||||| ||||||||  ||||||| ||||||||||   |||||||| ||||| |||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg-tgtgtcagtagtgtccgtgtcgtgtcctgtgtc 5775451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 8423660 - 8423729
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    |||| ||||| |||||  || |||||| |||||||||||||||||||  ||||||||| |||||||||||    
T  8423660 atgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacat 8423729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 545
Target Start/End: Complemental strand, 21945609 - 21945552
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||| ||||||||| |||||  |||||||||||||||||| |||| ||||||||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgaca 21945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 35161153 - 35161096
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 534  Q
    |||||||||| ||||| ||||||||||  |||| ||||||||||||| ||||||||||    
T  35161153 atgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtc 35161096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 616
Target Start/End: Original strand, 35723374 - 35723455
Alignment:
Q  536 gacaccgacatgacactgacatataaaattatactgaatcatgtg-attttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||||||| | |||||||||| ||| ||||| | ||||| ||||| |||||||| |||||||||||||||||  ||||||||    
T  35723374 gacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 522
Target Start/End: Complemental strand, 37203369 - 37203324
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggac 522  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||    
T  37203369 atgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 523
Target Start/End: Original strand, 46715416 - 46715461
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggaca 46715461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 545
Target Start/End: Complemental strand, 49431132 - 49431075
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||| |||||| || ||||||||||||| ||||| |||||||||| ||||||||||    
T  49431132 acactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgaca 49431075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 3064870 - 3064926
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||||||||| |||||| ||||||||| |||||| | | ||||||||||||||||||    
T  3064870 atgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 16073511 - 16073443
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||| | |||||| ||||||||| ||||||   ||||||||||||| ||||||| ||||||||||    
T  16073511 atgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgaca 16073443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 29205533 - 29205493
Alignment:
Q  505 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgaca 29205493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 532
Target Start/End: Original strand, 7214468 - 7214523
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtg 532  Q
    ||||||||| |||| || ||||||||| | | ||||||||||||||||||||||||    
T  7214468 atgaagcacaaacaatcatcggattaggcatttcccggtgtcggacatgtgtcgtg 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 604
Target Start/End: Original strand, 21658797 - 21658872
Alignment:
Q  529 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    |||||| ||||| ||||||| || ||||  |||||||||| | ||| ||||||||||||| ||||||||| |||||    
T  21658797 cgtgtccgacactgacatgaaaccgacacttaaaattatagtaaattatgtgattttctcaaattattagtggtgt 21658872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 529
Target Start/End: Original strand, 21873309 - 21873356
Alignment:
Q  482 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 529  Q
    |||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21873309 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtc 21873356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 529
Target Start/End: Original strand, 21929170 - 21929217
Alignment:
Q  482 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 529  Q
    |||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21929170 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtc 21929217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 623
Target Start/End: Complemental strand, 30838335 - 30838192
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 579  Q
    ||||||| |||||| |||| |||| ||||||  ||||||||||| |||||| ||| ||||| |||| ||||| || |  || ||||| ||| ||| || |    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatat 30838236  T
Q  580 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 623  Q
     ||||| || |||||||||| || |||| || ||||| ||||||    
T  30838235 aattttatcaaattattagcagtatcgacgtatcagtgtccgtg 30838192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 637
Target Start/End: Original strand, 40179652 - 40179727
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    ||||| ||||||| |||||||||| || || |||||  |||||| | |||||||| |||||||||||| |||||||    
T  40179652 aattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtc 40179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 606
Target Start/End: Complemental strand, 11931408 - 11931279
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    |||||||||| ||||||   |||||||  |||||| ||||||||||||| ||| ||||| || ||||||||||||  |||| ||| | ||| ||| |||     
T  11931408 atgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgtc-gataccgacatgacatcgacacatatatttacactaaatt 11931310  T
Q  576 atgtgattttctcgaattattagcggtgtcg 606  Q
    |||||||||| ||  ||||||| ||||||||    
T  11931309 atgtgattttttcatattattaacggtgtcg 11931279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 481 - 523
Target Start/End: Complemental strand, 30094126 - 30094084
Alignment:
Q  481 agcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||| |||||||||||||||| |||||||||||||| ||||    
T  30094126 agcacggacactcttcggattaggcgtgtcccggtgtccgaca 30094084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 482180 - 482237
Alignment:
Q  472 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 529  Q
    ||||||||||||| | |||||| ||||||||||||||| | |||||| |||| |||||    
T  482180 tatcaatgaagcatggacactcatcggattagacgtgttcaggtgtcagacacgtgtc 482237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 21345475 - 21345544
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    |||||||||  | |||| ||||||||| | ||| ||||||| ||| |||| |||||||||||||||||||    
T  21345475 atgaagcacacatactcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgacat 21345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 30103310 - 30103367
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||| |||||||||| |||||| | |||| ||||| |||||||| |||||||||||    
T  30103310 acactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgaca 30103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 514
Target Start/End: Complemental strand, 30299046 - 30299009
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccgg 514  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30299046 atgaagcacggacactcctcggattagacgtgtcccgg 30299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 514
Target Start/End: Complemental strand, 30327914 - 30327877
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccgg 514  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30327914 atgaagcacggacactcctcggattagacgtgtcccgg 30327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 533
Target Start/End: Original strand, 36409469 - 36409502
Alignment:
Q  500 ttagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||||||||||||||||| |||||||||||||||    
T  36409469 ttagacgtgtcccggtgtaggacatgtgtcgtgt 36409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 533
Target Start/End: Original strand, 36423635 - 36423668
Alignment:
Q  500 ttagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||||||||||||||||| |||||||||||||||    
T  36423635 ttagacgtgtcccggtgtaggacatgtgtcgtgt 36423668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 544
Target Start/End: Original strand, 40179596 - 40179645
Alignment:
Q  495 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgac 544  Q
    ||||||||| ||||||  ||||||| |||||||||||||| |||||||||    
T  40179596 tcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgac 40179645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 40613502 - 40613449
Alignment:
Q  553 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 606  Q
    |||| ||| ||||| ||||||| ||||||||||||| || ||||||||||||||    
T  40613502 gacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcg 40613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 53381532 - 53381601
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 545  Q
    |||||||||| |||||| |||||||||  |||||||||||||||| | | ||| ||||| ||||||||||    
T  53381532 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgaca 53381601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 9e-32; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 21522878 - 21522696
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||| ||||| |||||||| ||||||| |||||||||||| |||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  21522878 atgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaatta 21522779  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||| ||||| |  |||||||||| ||||||  |||||||| |||||||| ||||||||| ||||||  ||||| |||||||||    
T  21522778 tgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcat 21522696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 21533444 - 21533262
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||| ||||| |||||||| ||||||| |||||||||||| |||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  21533444 atgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaatta 21533345  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||| ||||| |  |||||||||| ||||||  |||||||| |||||||| ||||||||| ||||||  ||||| |||||||||    
T  21533344 tgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcat 21533262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 475 - 659
Target Start/End: Complemental strand, 19579831 - 19579647
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 574  Q
    ||||||| |||| |||||| ||||||||| |||||||||||||  ||||| ||||||||| ||||| |||| ||||| ||||  |  ||||  ||| |||    
T  19579831 caatgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaat 19579732  T
Q  575 catgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
     ||||||||||||| |||||||||| ||||||  || ||||| |||||||  | ||||||||| ||||| ||||| |||||||||    
T  19579731 tatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgcttcat 19579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 477 - 606
Target Start/End: Complemental strand, 3966631 - 3966502
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||||||||||||  ||| |||||  ||| ||||| ||||| |||| ||||| |||| ||| ||||| |||||||      
T  3966631 atgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattg 3966532  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    |||||||||||| |||||||||||||||||    
T  3966531 tgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 659
Target Start/End: Complemental strand, 15382591 - 15382423
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtga--tttt 585  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||  |||||     ||||| ||||  |  ||||||||||||| || |||  ||||    
T  15382591 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacacc-----gacaccgacacttgtaattatactgaattatatgatttttt 15382497  T
Q  586 ctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
     || |||||||||| ||||||  |||||| | |||||||| ||||||||||||||||  ||||| |||||||||    
T  15382496 ttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 15382423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 606
Target Start/End: Complemental strand, 7677833 - 7677704
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  || ||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||| ||||  |  ||||  ||||||| |    
T  7677833 atgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaatta 7677734  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||||| || |||||||||| ||||||    
T  7677733 tgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 630
Target Start/End: Original strand, 15410382 - 15410532
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 579  Q
    |||||||||||||| |||| |||||||||||||||||| |||||  |||||| ||  ||| |||||  ||||  ||| |||  |||| |||||||||| |    
T  15410382 aagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgtcgtatcgaacatcgacacaacaccaacacatatgattacactgaatcatat 15410481  T
Q  580 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 630  Q
     |||||||  |||||||||||||||||  |||||||| |||||||| ||||    
T  15410482 aattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 32766874 - 32767003
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || |||||||||| ||| ||||||||||| ||||||| |  |||||||||| |||||  ||| ||| ||||| | |||||      
T  32766874 atgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaattg 32766973  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    || ||||||||| |||||||||||||||||    
T  32766974 tgcgattttctcaaattattagcggtgtcg 32767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 546 - 653
Target Start/End: Complemental strand, 12927713 - 12927606
Alignment:
Q  546 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatg 645  Q
    ||||||||||||||| ||||| ||| ||| || |||||||||| ||||||||||| ||||| |||||| || || || |||||||| ||||| ||||||     
T  12927713 tgacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtctgtatcatgtccagtgtctgtgtata 12927614  T
Q  646 tatctgtg 653  Q
    ||||||||    
T  12927613 tatctgtg 12927606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 6401626 - 6401444
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| | |||| || ||| |||| ||||| |||| |||||||||| ||||| |||| ||||| |||| ||| ||||| |||| ||      
T  6401626 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattt 6401527  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||  ||   ||||  ||||||  ||||| || ||||||||  ||||||||||||||| |||||| |||||||||    
T  6401526 tgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtccgtgtctgtatccgtgcttcat 6401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 536 - 638
Target Start/End: Original strand, 22423802 - 22423904
Alignment:
Q  536 gacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtg 635  Q
    |||||||||| ||||| |||||||| ||||||| ||||| ||||||||||||| |||||||||  |||||   ||||||||||||||||| ||| || ||    
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgttcgatg 22423901  T
Q  636 tcc 638  Q
    |||    
T  22423902 tcc 22423904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 477 - 642
Target Start/End: Original strand, 37328777 - 37328940
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||  ||| ||||||| ||||||  |  ||||||| |||||||||| ||||| |||| ||  ||||| |||||||      
T  37328777 atgaagcacggacactcctcggattaagcgtatcccggtatcggac--gcatcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattt 37328874  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    |||||||||  | ||||||| || |||||| ||| ||||| |||||||| ||| ||||||||||||    
T  37328875 tgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtccgtgt 37328940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 480 - 625
Target Start/End: Original strand, 7174954 - 7175098
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 579  Q
    |||||||||||||  ||  ||||| ||||||||  | ||||||| |||| |||| ||||| ||||| ||  |||||| ||| |||||| |  ||| ||||    
T  7174954 aagcacgaacacttctcaaattaggcgtgtccccttatcggacacgtgttgtgt-tgacatcgacacgatgctgacacatataattatgccaaattatgt 7175052  T
Q  580 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||    
T  7175053 gattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 17123164 - 17122995
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| ||||||||| |||||||||||| |||||||  ||||||||||           ||| |||| ||||  || |    
T  17123164 atgaagcacggacactcctcggattaggcgtgtcccg-tgtcggacatgtttcgtgtccaacaccgacat-----------atataattgtacttgatta 17123077  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||| ||||||||||||||| |  |||||||| ||| ||| ||||||| |||||||||   ||||||||||||||    
T  17123076 tgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgt-cctatctgtgcttcat 17122995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 478 - 606
Target Start/End: Complemental strand, 18592200 - 18592072
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 577  Q
    ||||||||| |||||| ||| ||||| ||||||||| |||| |||| |||| ||||| |||||||||| ||||| | || ||| ||||| | ||||| ||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T
Q  578 gtgattttctcgaattattagcggtgtcg 606  Q
    || |||||||  || ||||||||||||||    
T  18592100 gtaattttcttaaaatattagcggtgtcg 18592072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 30098454 - 30098310
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| ||| || |||||||||  |||||| |||||| |||| |||||||||| ||||| |||  || || ||||| || ||||| | ||||| |    
T  30098454 atgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaatta 30098355  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccg 621  Q
    |||||||||||| |||||||| |||| |||  |||||||| ||||    
T  30098354 tgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 642
Target Start/End: Original strand, 21190997 - 21191152
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    ||||||||||| |||||| ||||||||| |||||||||| |||||||| |||| ||||| ||||||     ||||||      |  ||||| |||||||     
T  21190997 aatgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacacc-----gacact------tgtaattacactgaatt 21191085  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    |||||||||| || |||||||||| ||||||   ||||||| |||||||| ||||||||||| ||||    
T  21191086 atgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgt 21191152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 477 - 640
Target Start/End: Original strand, 19820330 - 19820488
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || |||||| |||||||||||||||||||   |||||||| ||||       ||||| ||||  || |||| |||| ||| |    
T  19820330 atgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca---gtcgtgtccgacaggtgtccgacaccgacacttataattgtacttaatta 19820426  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||  |||||||| |||||||||||||||||  |||||||| |||||||| ||||||||||||||    
T  19820427 tg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgt 19820488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 477 - 658
Target Start/End: Original strand, 30502330 - 30502500
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||||||| || | ||||||| | |||||| ||||||||||||||||||||| |||||||||         ||||||  ||||| ||||||| |    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgac---------acatat--aattacactgaatta 30502418  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttca 658  Q
     ||||||||||| |||||||||||||||    || ||||  |  ||| | |||||||||||||||| |||||| ||||||||    
T  30502419 agtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggtgtccgtgtttgtatccgtgcttca 30502500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 477 - 658
Target Start/End: Original strand, 30542673 - 30542843
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||||||| || | ||||||| | |||||| ||||||||||||||||||||| |||||||||         ||||||  ||||| ||||||| |    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgac---------acatat--aattacactgaatta 30542761  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttca 658  Q
     ||||||||||| |||||||||||||||    || ||||  |  ||| | |||||||||||||||| |||||| ||||||||    
T  30542762 agtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggtgtccgtgtttgtatccgtgcttca 30542843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 604
Target Start/End: Original strand, 12264810 - 12264887
Alignment:
Q  527 gtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    ||||| ||||||||||| |||||| ||||| ||| ||||| |||||||||||| |||||||| ||| |||||||||||    
T  12264810 gtcgtatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 656
Target Start/End: Original strand, 13287421 - 13287509
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgctt 656  Q
    ||||||| |||||||||| || |||||||| | ||||||| |||| ||| |||||||| ||||||||||||||||  ||||| ||||||    
T  13287421 actgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 22299497 - 22299572
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    |||||||||||||||||||||||| |  |||||||||| |||||| ||||||| |||||||||| | ||||||||||    
T  22299497 aattatactgaatcatgtgatttt-ttaaattattagctgtgtcggtgtgtcaatatccgtgtcgtatccggtgtcc 22299572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 525 - 605
Target Start/End: Complemental strand, 25817575 - 25817495
Alignment:
Q  525 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 605  Q
    ||||| |||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||| |  |||||||||| |||||    
T  25817575 gtgtcatgtctgacaccgacatgatactgacacatataatcatactgaatcatatgatttttttaaattattagcagtgtc 25817495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 659
Target Start/End: Complemental strand, 6770580 - 6770489
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||| ||||||||||||  |||||||||  |||||  ||||||||| |||||||||||| |||||||||| |  ||||| |||||||||    
T  6770580 actgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcat 6770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 587
Target Start/End: Complemental strand, 21814389 - 21814279
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||||||| || | |||| || |||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| ||| ||||| |||| ||      
T  21814389 atgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattt 21814290  T
Q  577 tgtgattttct 587  Q
    |||||||||||    
T  21814289 tgtgattttct 21814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 637
Target Start/End: Original strand, 36642716 - 36642853
Alignment:
Q  499 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 598  Q
    ||||| ||||||||| ||||||||| |||||||||| |||||| ||||||||| ||||  || | ||| ||| ||  |||| | ||| || ||||||||     
T  36642716 attaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaa 36642814  T
Q  599 cggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    | ||||||  |||||||| |||||||| |||||||||||    
T  36642815 ctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 36642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 606
Target Start/End: Complemental strand, 11686066 - 11685938
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || |||||| |||| |  ||| | ||||| |||||||||| |||||||| | ||||| |||| ||| ||||| ||| ||| |    
T  11686066 atgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaatta 11685968  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    || || |||||| |||||||||||||||||    
T  11685967 tgcgactttctcaaattattagcggtgtcg 11685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 642
Target Start/End: Complemental strand, 21542130 - 21541993
Alignment:
Q  505 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |||| || || |  |||||||||  ||||    
T  21542130 cgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgt 21542031  T
Q  605 cgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||   ||||| | || ||||| |||| |||||||||||    
T  21542030 cggcatgtcaatgtctgtgtcgtgtctggtgtccgtgt 21541993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 616
Target Start/End: Complemental strand, 19438388 - 19438332
Alignment:
Q  560 aaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    ||||||| ||||||| ||||||||||||| |||||| |||| |||||||||||||||    
T  19438388 aaaattacactgaattatgtgattttctcaaattatcagcgatgtcgatgtgtcagt 19438332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 659
Target Start/End: Original strand, 26205777 - 26205873
Alignment:
Q  563 attatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||| ||||||| |||| |||||||| || | ||| |||| |||| |||||||| ||| ||||||||||||||||||||| ||| ||  ||||||||    
T  26205777 attacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgtgtctgtgtccatgcttcat 26205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 28588616 - 28588684
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||| | |||||||||||||||  ||||||| |||||| || |||||||||||| ||||||||||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgaca 28588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 605
Target Start/End: Original strand, 41091188 - 41091316
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||| || ||||||||||| |  |||||  ||||  ||||| ||| ||||  |||| ||||  |||| ||| ||||| ||||||| |    
T  41091188 atgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaatta 41091287  T
Q  577 tgtgattttctcgaattattagcggtgtc 605  Q
    |||||||||||| ||| |||||| |||||    
T  41091288 tgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 499 - 614
Target Start/End: Complemental strand, 12641780 - 12641665
Alignment:
Q  499 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 598  Q
    |||||||||||| | |||||| ||| |||| |||||||||||| ||| ||||||||||  |  ||||||||| ||| |||||||||| |  ||||||||     
T  12641780 attagacgtgtctccgtgtcgaacacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaa 12641681  T
Q  599 cggtgtcgatgtgtca 614  Q
    |  |||||| ||||||    
T  12641680 ctatgtcgacgtgtca 12641665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 477 - 595
Target Start/End: Complemental strand, 14873639 - 14873527
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| ||||||||||||| ||||| |||| | ||      |||||||||||| |||| ||| ||||| ||| ||| |    
T  14873639 atgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgt------ccgacatgacaccgacacatataattacactaaatta 14873546  T
Q  577 tgtgattttctcgaattat 595  Q
    |||| ||||||| ||||||    
T  14873545 tgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 547 - 650
Target Start/End: Original strand, 16203796 - 16203899
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgt 646  Q
    ||||| |||| ||| ||||| ||| ||| ||| ||||||||| |||||||||| ||||||   ||| ||| |||||||||||| ||||||| |||| |||    
T  16203796 gacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtgtctgt 16203895  T
Q  647 atct 650  Q
    ||||    
T  16203896 atct 16203899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 534
Target Start/End: Original strand, 21194068 - 21194122
Alignment:
Q  480 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 534  Q
    ||||||| |||||| ||||||||| |||| ||||||||| |||||||||||||||    
T  21194068 aagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtc 21194122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 21351852 - 21351898
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||    
T  21351852 atgaagcacggacactcttcggattagacgtgttccagtgtcggaca 21351898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 660
Target Start/End: Complemental strand, 41995506 - 41995416
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcatt 660  Q
    ||||| |||||||||| ||||||||||||  ||||||  |||||||| || ||||| | ||| ||||||||||  ||||| ||||||||||    
T  41995506 tgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcatt 41995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 16304368 - 16304425
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 534  Q
    |||||||||| ||| || |||||||||||||||| ||||||||| || ||||||||||    
T  16304368 atgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtc 16304425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 598
Target Start/End: Complemental strand, 40131749 - 40131628
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||| |||| |||||| | ||| ||||||||||||  |||| ||||   ||||||||||||| ||| | ||||| || || || ||||| ||||||| |    
T  40131749 atgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactgaatta 40131650  T
Q  577 tgtgattttctcgaattattag 598  Q
    ||||||||| || |||||||||    
T  40131649 tgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 540
Target Start/End: Complemental strand, 43001924 - 43001859
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    |||||||||||| |||||| ||||||||| ||||||| |||||  |||| |||||||||| |||||    
T  43001924 caatgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 545
Target Start/End: Original strand, 18421778 - 18421851
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtc----ccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||  |||||| ||||||||||||||||    |||||| ||||||||||||||||| ||| ||||||    
T  18421778 aatgaagcacagacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgaca 18421851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 642
Target Start/End: Original strand, 41558707 - 41558779
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||||| |||| |||||||| ||||||||   ||||| |||||||||| |||||||| | ||||||||||||||    
T  41558707 tgaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccggtgtccgtgt 41558779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 42893477 - 42893409
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||| | |||||| ||  ||||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  42893477 atgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgaca 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 6035558 - 6035472
Alignment:
Q  529 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||||||| |||||||| ||||| |||| ||| ||||| ||||||| || | |||| ||| |||||||||||||||||  ||||||||    
T  6035558 cgtgtctgtcaccgacacgacaccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 30183655 - 30183556
Alignment:
Q  499 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 598  Q
    ||||| |||||||| |||||||||| ||||||||||||| ||| ||| ||||| ||||  |  ||||| || |||| ||||||| || || |||||||||    
T  30183655 attaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattag 30183556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 623
Target Start/End: Original strand, 38816729 - 38816772
Alignment:
Q  580 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 623  Q
    ||||||||| |||||||||||||||||  |||||||||||||||    
T  38816729 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 38816772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 2437028 - 2436982
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||||||| ||||||||| ||||||  |||||||||||    
T  2437028 atgaagcacgaacactcctcggattaggcgtgtcttggtgtcggaca 2436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 641
Target Start/End: Complemental strand, 4105302 - 4105221
Alignment:
Q  562 aattatactgaatcatgtgat--tttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    ||||| ||||||| |||||||  ||| || |||||||||   |||||  |||||||||||||||||||||||||| ||||||    
T  4105302 aattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggtatccgtg 4105221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 616
Target Start/End: Original strand, 21351889 - 21351975
Alignment:
Q  530 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    ||||| |||||||||||||||| ||||  |  ||||| ||||||| |||||| ||| || |||||||||  |||||| |||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagt 21351975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 640
Target Start/End: Complemental strand, 22013429 - 22013379
Alignment:
Q  590 aattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    |||||||||| ||||||  |||||||| |||||||| ||||||||||||||    
T  22013429 aattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 22013379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 30098982 - 30099048
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||||||| | |||| || |||||||| ||||| |||| ||||||| || ||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgaca 30099048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 563 - 637
Target Start/End: Complemental strand, 34879392 - 34879318
Alignment:
Q  563 attatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    |||| ||||||| || |||||||||| |||| ||||||||| ||  ||||| |||||||||||| ||||| ||||    
T  34879392 attacactgaattatatgattttctcaaatttttagcggtgccggcgtgtccgtatccgtgtcaagtccgatgtc 34879318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 527
Target Start/End: Original strand, 38464315 - 38464365
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtg 527  Q
    |||||||||  |||||| |||||||||  ||||||||||||||||||||||    
T  38464315 atgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgtg 38464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 576 - 642
Target Start/End: Complemental strand, 42469250 - 42469184
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    |||| |||||||| |||||||| | ||||||  |||||| |||||||||| ||| ||||||||||||    
T  42469250 atgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgt 42469184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 639
Target Start/End: Complemental strand, 6247665 - 6247588
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccg 639  Q
    ||||| ||||||| |||||||||| || |||||||||  ||||||  |||||||| | ||| || |||||||||||||    
T  6247665 aattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccg 6247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 659
Target Start/End: Original strand, 25888339 - 25888408
Alignment:
Q  590 aattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||  |||| | |||||| ||||||||||| ||||| |||||||||| || ||| |||||||||    
T  25888339 aattattagtagtgttggtgtgtctgtatccgtgtcgtgtcctgtgtccgtgtctggatccgtgcttcat 25888408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 477 - 653
Target Start/End: Original strand, 263303 - 263479
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||| |||| |||||| ||||||||| ||||||  ||| ||| ||| ||||||||||||||||||||| ||||||||||  || ||||| ||||||| |    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtg 653  Q
    |||| ||||||| |||||||||| |||| ||  ||||||| |||||||| | ||| ||||||||||  |||||||||    
T  263403 tgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccgtatctgtg 263479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 477 - 641
Target Start/End: Complemental strand, 241722 - 241558
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||| ||||   | ||||| ||| ||| |    
T  241722 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaatta 241623  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||||||||  | |||||||||| ||||||  |||||||| |||||||| |||||||||||||||    
T  241622 tgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 5e-27; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 15796225 - 15796407
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| ||||| |||| ||||| |||||| ||| ||||| ||||  |  ||||| ||||||| |    
T  15796225 atgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaatta 15796324  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    | ||||||| || |||||||| | ||||||  |||||| | |||||||| ||||||||||||||||   |||| |||||||||    
T  15796325 tatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcat 15796407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 477 - 604
Target Start/End: Original strand, 8039766 - 8039893
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  | |||||||||||||  |||||||||||||||||||||| || |||| |||||||||| ||||| |||| ||| ||||| ||||||| |    
T  8039766 atgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaatta 8039865  T
Q  577 tgtgattttctcgaattattagcggtgt 604  Q
    | | |||||||| |||||||||||||||    
T  8039866 tataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 476 - 616
Target Start/End: Original strand, 4987221 - 4987361
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    ||||||| ||| |||||| ||||||||| ||||||||||||||||||| ||||||||||  ||||||||| | |||  |||  |  ||||| |||||||     
T  4987221 aatgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatt 4987320  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||||||||| || |||||||||| ||||||  ||||||||    
T  4987321 atgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 477 - 641
Target Start/End: Original strand, 41961581 - 41961745
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||  ||||||||| |||||||| |||||||||| |||||||||| || ||||||| ||||| ||||  |  ||||| || |||| |    
T  41961581 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataa 41961680  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    |||||| || || |||||||||  ||| ||  |||||||| || ||||| |||||||||||||||    
T  41961681 tgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtccgtg 41961745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 40993277 - 40993345
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40993277 atgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 40993345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 568 - 659
Target Start/End: Original strand, 3164047 - 3164138
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||| |||||||||| || |||||||||| ||||||| ||| || | |||||||| |||||||||||||||| |||||| |||||||||    
T  3164047 actgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcat 3164138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 475 - 614
Target Start/End: Complemental strand, 29508569 - 29508435
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 574  Q
    |||||||||||| |||||  | |||||||||||||||||||||||||| ||||||||||| |||||| ||||      |||| ||| ||||| |||||||    
T  29508569 caatgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacat-----cgacacatataattacactgaat 29508475  T
Q  575 catgtgattttctcgaattattagcggtgtcgatgtgtca 614  Q
     || ||||||| || ||||||||| ||| ||| |||||||    
T  29508474 tatatgattttttcaaattattagtggtatcggtgtgtca 29508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 524 - 638
Target Start/End: Original strand, 16192728 - 16192842
Alignment:
Q  524 tgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 623  Q
    |||||||||||||||||||||| ||||   ||| ||| ||||| ||||||| |||| |||||||| |||||||| |||||||| |||||| | ||| | |    
T  16192728 tgtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtcggcatctgag 16192827  T
Q  624 tcatgtccggtgtcc 638  Q
    ||||||||| |||||    
T  16192828 tcatgtccgatgtcc 16192842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 637
Target Start/End: Complemental strand, 25065031 - 25064877
Alignment:
Q  481 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtg 580  Q
    ||||||||||||| |||||| |  |||||||||||||| |||| |||||||||| |||||| ||| || ||  ||| ||  ||||| ||| ||| |||||    
T  25065031 agcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacacat--aattacactaaattatgtg 25064934  T
Q  581 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    ||||| || ||| |||||||||||||  |||||| | || ||||| |||||||||||    
T  25064933 attttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtc 25064877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 499 - 623
Target Start/End: Complemental strand, 14832205 - 14832081
Alignment:
Q  499 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 598  Q
    ||||| ||||||||||||||||||| |||||||||| || ||||||| ||||||||||  |  ||||| | ||| | |||||||||| || |||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T
Q  599 cggtgtcgatgtgtcagtatccgtg 623  Q
    | || |||  ||||| |||||||||    
T  14832105 ctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 20503582 - 20503514
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  20503582 atgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgaca 20503514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 55401192 - 55401124
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  55401192 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 55401124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 494 - 632
Target Start/End: Original strand, 2620003 - 2620139
Alignment:
Q  494 ttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatt 593  Q
    |||||||||| ||||||||| || |||||||||||||||||| |||||| || |||||  ||| ||  | ||| ||| ||| ||||||||||||| |||     
T  2620003 ttcggattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacacat--agttacacttaattatgtgattttctcaaatg 2620100  T
Q  594 attagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||||| |||||||  |||||||| |||| ||| ||||||    
T  2620101 attagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 604
Target Start/End: Original strand, 17005550 - 17005677
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||||||| ||||||| |||||||||| |||||| |||||| |||| ||||  ||||||||||| |||  |||| ||||  || ||||| ||||||| |    
T  17005550 atgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaatta 17005649  T
Q  577 tgtgattttctcgaattattagcggtgt 604  Q
    | ||||||| || ||||||||| |||||    
T  17005650 tatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 24205057 - 24205154
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| |||| || |||| |||||||| |||||||| | ||||||  |||||||| |||||||| |||||||||||||||| ||| || |||||||||    
T  24205057 aattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcat 24205154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 34185054 - 34185183
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||  |||| |||| ||||  |||| ||||| ||||  |  ||||| |||||||      
T  34185054 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattg 34185153  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||||| |  |||||||||| ||||||    
T  34185154 tgtgattttttgaaattattagccgtgtcg 34185183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 562 - 642
Target Start/End: Original strand, 4990983 - 4991063
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||||| ||||||| |||| |||||||| || ||||||||||||||  |||||||| |||||||| ||| ||||||||||||    
T  4990983 aattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgt 4991063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 562 - 642
Target Start/End: Complemental strand, 8383300 - 8383220
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||||| ||||||| || |||||||||| |||||||||||||||||  |||||| | |||||||| ||||| ||||||||||    
T  8383300 aattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgt 8383220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 641
Target Start/End: Complemental strand, 28918120 - 28917965
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||| | |||||| | ||||||| |||||||| |||||||||| ||||||||||         || ||||| ||||  |  ||||| ||||||| |    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc---------cacgacaccgacacttgtaattacactgaatta 28918030  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 641  Q
    ||||||||| || ||||||||||  |||||  |||||||| |||||||| |||||||||||||||    
T  28918029 tgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtg 28917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 540
Target Start/End: Complemental strand, 27505368 - 27505305
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    |||||||||| |||||| ||||||||| | ||||||||||||||||| |||||||||| |||||    
T  27505368 atgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 637
Target Start/End: Complemental strand, 11666070 - 11665912
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 578  Q
    |||||||| |||||| | | ||||| ||||| ||| | || |||| ||||||||||| ||| | ||| ||||| |||| ||| ||||| ||| |||  ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  579 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    ||||||| || ||||||||||| ||||| ||||| ||| |  ||||| |||||||||||    
T  11665970 tgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtc 11665912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 616
Target Start/End: Complemental strand, 26290470 - 26290360
Alignment:
Q  506 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 605  Q
    |||||| ||||||||||||||| ||| || |||||||  | |||||||||| ||| ||||| || |||  ||||||||||||| ||||||||  ||||||    
T  26290470 gtgtcctggtgtcggacatgtgccgtttccgacaccggaacgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtc 26290371  T
Q  606 gatgtgtcagt 616  Q
    |  ||||||||    
T  26290370 ggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 488 - 598
Target Start/End: Complemental strand, 28812632 - 28812522
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 587  Q
    |||||| ||||||||| ||||||| | |||||||||||| |||||||||||||| ||| ||||| ||||  |  || || ||||||| |||||||||  |    
T  28812632 acactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttctt 28812533  T
Q  588 cgaattattag 598  Q
    | |||||||||    
T  28812532 caaattattag 28812522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 40052429 - 40052383
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  40052429 atgaagcacgaacactcctcggattaggcgtgtcccggtgtcggaca 40052383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 659
Target Start/End: Complemental strand, 25093617 - 25093448
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 578  Q
    |||||||||||||||||| ||||||| |||   | ||||||||||||||| ||||| |||||||||         ||||||  ||||| |||||||  ||    
T  25093617 gaagcacgaacactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgac---------acatat--aattacactgaattgtg 25093529  T
Q  579 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||| ||| |||| | ||||||  |||| ||| || ||||| ||||||||||| |||| |||||| || ||||||    
T  25093528 tgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgtgtttgtatccgtacttcat 25093448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 625
Target Start/End: Complemental strand, 37077487 - 37077338
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    |||||||||| ||| || | |||||||  ||||||| |||||||||||| ||| ||||  ||||||||||||||| ||||| |||  |||  | |||||     
T  37077487 atgaagcacggacattccttggattaggtgtgtccccgtgtcggacatgcgtccgtgtacgacaccgacatgacaatgacacatatgattccattgaatt 37077388  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    |||| || ||||| |||||||| ||||||||  |||||| | ||||||||    
T  37077387 atgttatattctcaaattattatcggtgtcggcgtgtcactgtccgtgtc 37077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 49651718 - 49651846
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||  |||||||||  |||||||||||||||| |||||||||||| |   |||||| ||||| ||||  |  ||||| | ||||| |    
T  49651718 atgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattacagtgaatta 49651816  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||||| || |||||||||| ||||||    
T  49651817 tgtgattttttcaaattattagccgtgtcg 49651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 4466622 - 4466694
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||| || |||||||||  |||||||| ||||||||  |||||||| | |||||||||||||||||||||    
T  4466622 actgaattatatgattttcttaaattattaccggtgtcggagtgtcagtgttcgtgtcatgtccggtgtccgt 4466694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 638
Target Start/End: Complemental strand, 14829816 - 14829657
Alignment:
Q  479 gaagcacgaacactcttcggattagacgtgtcccggtgtcggac-atgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 577  Q
    |||||||| ||| || || |||||| ||||||||||||||| || |  | |||||||  ||||||||| ||||| ||||  |  |||||   ||||| ||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattat 14829717  T
Q  578 gtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    |||||||| || |||||||||| ||||||  |||||||| || ||||||||||||||||||    
T  14829716 gtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtcc 14829657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 523
Target Start/End: Complemental strand, 25775626 - 25775578
Alignment:
Q  475 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  25775626 caatgaagcacgaacactcctcggattaggcgtgtcctggtgtcggaca 25775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 8789490 - 8789560
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtg--tcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| ||||||||| |||||| ||||||| ||||||||  ||||||| ||||||||||    
T  8789490 atgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgaca 8789560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 576 - 659
Target Start/End: Original strand, 10335316 - 10335399
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||| ||| || |||||||||  ||||||  |||||||| |||||||| ||||||||||||||||  ||||| |||||||||    
T  10335316 atgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcat 10335399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 606
Target Start/End: Original strand, 11313737 - 11313860
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac-----cgacatgacactgacatataaaattatactgaatcatgtgat 582  Q
    |||||||| |||||||  ||||||| |||||  ||| ||| ||||||||||||     ||||| |||||| ||| ||| ||||| ||| ||| |||||||    
T  11313737 acactcttaggattaggagtgtcccagtgtcaaacacgtgacgtgtctgacactaacacgacacgacactaacacatataattacactaaattatgtgat 11313836  T
Q  583 tttctcgaattattagcggtgtcg 606  Q
    |||||| |||||||||| ||||||    
T  11313837 tttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 619
Target Start/End: Original strand, 13620786 - 13620837
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatc 619  Q
    ||||||||||||||||||||| ||||| ||||||||||||  ||||||||||    
T  13620786 actgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtatc 13620837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 525 - 659
Target Start/End: Original strand, 34307765 - 34307893
Alignment:
Q  525 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgt 624  Q
    |||||||||| |||||||||| ||||||      || ||||| ||||||  ||||||||||||| ||||||||||||||||   ||||  || || ||||    
T  34307765 gtgtcgtgtccgacaccgacacgacact------tataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgt 34307858  T
Q  625 catgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||| |||||  |||||  ||||||||    
T  34307859 catgtccggtgttcgtgtccgtatccatgcttcat 34307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 1438847 - 1438793
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    ||||||||||||| ||||||||||||| |||| |||||| ||||| |||||||||    
T  1438847 aattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagt 1438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 540
Target Start/End: Complemental strand, 3631796 - 3631738
Alignment:
Q  482 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    ||||| |||||| ||||| ||| ||||||| |||||||||||||||||||||| |||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 640
Target Start/End: Original strand, 8587037 - 8587115
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||| ||| ||| |||||||||| || ||||| |||  ||||||  |||||||| |||||||||||||||||||||||    
T  8587037 aattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgt 8587115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 546
Target Start/End: Complemental strand, 8842451 - 8842377
Alignment:
Q  472 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    |||| |||||||||| |||||| ||||||||| |||||| |  | ||  ||||||||||||||||||||||||||    
T  8842451 tatctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacat 8842377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 543
Target Start/End: Original strand, 26492147 - 26492213
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 543  Q
    ||||||| || ||| || ||||||||||||||||  |||||| ||||||||||||||| ||||||||    
T  26492147 atgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccga 26492213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 34910434 - 34910393
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtc 518  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  34910434 atgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 540
Target Start/End: Original strand, 5440969 - 5441033
Alignment:
Q  477 atgaagcacgaacactcttcggattagac-gtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    |||||||||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||    
T  5440969 atgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgtctgacac 5441033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 11252093 - 11252025
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||  |||||| ||||||||| ||||| ||| || |||||| |||| ||||||||||||||||    
T  11252093 atgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgaca 11252025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 15999952 - 16000008
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||| ||||| |||||| | ||||||| ||||||||||||||||||| |||||||||    
T  15999952 atgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 637
Target Start/End: Complemental strand, 16789139 - 16788980
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||  |||||  |||||||| ||| ||||||||||| |||| ||||| |||| |||||  |||  || ||||| ||||||| |    
T  16789139 atgaagcacggacactcctcaaattaggtgtgtcccg-tgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaatta 16789041  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    | ||||||| |  |||||||| |  | ||| ||| |||||||||||||||| || ||||||    
T  16789040 tatgatttttttaaattattaactatatcggtgtatcagtatccgtgtcatatctggtgtc 16788980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 641
Target Start/End: Complemental strand, 39002100 - 39001996
Alignment:
Q  537 acaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgt 636  Q
    ||||| ||| |||||||||||||| ||||| | ||||| |||||||||| || ||||  || |  ||||| ||||||||| | |||||| ||| ||||||    
T  39002100 acaccaacacgacactgacatatataattacattgaattatgtgattttttcaaattcctatccatgtcggtgtgtcagtgtacgtgtcgtgttcggtgt 39002001  T
Q  637 ccgtg 641  Q
    |||||    
T  39002000 ccgtg 39001996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 604
Target Start/End: Complemental strand, 1550220 - 1550141
Alignment:
Q  525 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    ||||||||||  |||| |||| ||||||||||  || ||||| |||||||  ||||||||| || |||||||||||||||    
T  1550220 gtgtcgtgtcgaacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgt 1550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 606
Target Start/End: Original strand, 7614416 - 7614475
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 606  Q
    ||||| |||||||| ||||||||||||| ||||||||||||  |||||||| | ||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcg 7614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 606
Target Start/End: Complemental strand, 7928508 - 7928449
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 606  Q
    ||||| |||| ||| ||||| ||||||| |||||||||| || |||||||||||||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Original strand, 11493377 - 11493440
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||| ||||||| |||||||||||||  |||||||| |||||||| |||||| | ||||||||    
T  11493377 aattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtc 11493440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 523
Target Start/End: Complemental strand, 21720878 - 21720843
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggaca 523  Q
    |||||| |||||||||||||||||||||||||||||    
T  21720878 acactcatcggattagacgtgtcccggtgtcggaca 21720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 640
Target Start/End: Original strand, 32429375 - 32429474
Alignment:
Q  541 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||||||| || || || ||||  ||||||| ||||||||||||  ||||||||||| |||||  |||||| | | |||||  ||||||||||||||    
T  32429375 cgacatgacaccgatatttataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgt 32429474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 545
Target Start/End: Complemental strand, 45451641 - 45451602
Alignment:
Q  506 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  45451641 gtgtctcggtgtcggacatgtgtcgtgtccgacaccgaca 45451602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 602
Target Start/End: Original strand, 49505155 - 49505210
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggt 602  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||| |||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 659
Target Start/End: Original strand, 750590 - 750732
Alignment:
Q  518 cggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtca-gt 616  Q
    |||||| |||||||||| || ||||||| ||||| ||||  |  ||||  |  |||| ||||||| || || |||||||||  ||||||  |||||| ||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagt 750689  T
Q  617 atccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
     |||||||| ||||||||||||||||  ||||| |||||||||    
T  750690 gtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 15544736 - 15544682
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||||||| |||| |||||||||| || |||||||||||||||| | ||||||||    
T  15544736 aattatacagaattatgtgattttatcaaattattagcggtgtcaacgtgtcagt 15544682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 25074912 - 25074866
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||||||| |||||||||  ||||||| ||||||||||    
T  25074912 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggaca 25074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 623
Target Start/End: Original strand, 5407271 - 5407324
Alignment:
Q  570 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 623  Q
    ||||| ||||||||||||| |||| ||||||||||||  ||||| |||||||||    
T  5407271 tgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtg 5407324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 659
Target Start/End: Complemental strand, 7171497 - 7171448
Alignment:
Q  610 tgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||||||||| ||||||||||| ||||  ||||| |||||||||    
T  7171497 tgtcagtatccgtgtcgtgtccggtgtctgtgtccgtatccgtgcttcat 7171448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 7171607 - 7171554
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 541  Q
    |||||| | ||||||| |||||| |||||||||||| |||||||||| ||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacacc 7171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 546
Target Start/End: Complemental strand, 18427066 - 18426997
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 546  Q
    ||||| |||| |||||| || ||||||  ||||||||||| |||||| ||||||| || |||||||||||    
T  18427066 atgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacat 18426997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 523
Target Start/End: Original strand, 24204980 - 24205029
Alignment:
Q  474 tcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||| |||||| ||| ||||| ||||||| |||||||||||    
T  24204980 tcaatgaagcacggacactcctcgaattaggcgtgtcctggtgtcggaca 24205029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 599
Target Start/End: Complemental strand, 28678378 - 28678309
Alignment:
Q  530 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagc 599  Q
    |||||||||||| ||| ||||| |||| ||| ||||||||| ||| |||||||||| |  ||||||||||    
T  28678378 gtgtctgacaccaacacgacaccgacacatacaattatactaaattatgtgattttattaaattattagc 28678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 35994754 - 35994850
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||| |||||||||| || |||||||||| ||||||   ||||| | ||| |||| |||||||||||| |||  ||||| |||||||||    
T  35994754 aattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccgtgcttcat 35994850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 598
Target Start/End: Original strand, 9678 - 9799
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||||| |||||||||| |||| |||| ||||||||||||||||| ||| ||||| |||| ||| ||||| ||||||| |    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  577 tgtgattttctcgaattattag 598  Q
     ||||||||||| |||||||||    
T  9778 agtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 472 - 659
Target Start/End: Original strand, 34784908 - 34785095
Alignment:
Q  472 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactg 571  Q
    |||| |||||||||  |||||| ||| || || |||||||| ||||| |||| |||||||||| || ||||||| ||||| |||| ||| ||||| |||     
T  34784908 tatctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacacta 34785007  T
Q  572 aatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||| ||||||||||||  ||  |||||  |||||| ||||||||| |||||||| |||| || ||||||||  |||||||||||||||    
T  34785008 aattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatctgtgcttcat 34785095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 545
Target Start/End: Original strand, 2438660 - 2438729
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  2438660 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 2438729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 27286223 - 27286352
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||  ||||||||  |||||||  |||||||||||||||||||||||||||| |||| |||||||||| |||||  || ||||| ||| ||| |    
T  27286223 atgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaatta 27286322  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    |||||| || || ||||||||||| |||||    
T  27286323 tgtgatcttatcaaattattagcgttgtcg 27286352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 18840955 - 18841023
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  18840955 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 18841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 477 - 605
Target Start/End: Complemental strand, 44860448 - 44860320
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||| |||||  |||||||| |||||||||  |||||||||  ||||| ||| ||||| |||| ||| ||||| ||||||| |    
T  44860448 atgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatta 44860349  T
Q  577 tgtgattttctcgaattattagcggtgtc 605  Q
    || ||||||||| ||||||||||||||||    
T  44860348 tgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 477 - 623
Target Start/End: Original strand, 22084758 - 22084909
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtg---tcggacatgtgtcgtgtctgacaccgacatgacactg--acatataaaattatactg 571  Q
    |||||||||  |||||| ||||||||| ||||||||||||   || |||| |||| ||||| ||||| |||| || || |  ||||||||||||| ||||    
T  22084758 atgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacactg 22084857  T
Q  572 aatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 623  Q
    ||| || |||||||||| |||||||| |||||| |||||||| |||||||||    
T  22084858 aattatatgattttctcaaattattaacggtgttgatgtgtccgtatccgtg 22084909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 553 - 632
Target Start/End: Complemental strand, 23718078 - 23717999
Alignment:
Q  553 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    |||| ||| ||||| ||||||| |||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  23718078 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 23717999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 553 - 632
Target Start/End: Complemental strand, 24105750 - 24105671
Alignment:
Q  553 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    |||| ||| ||||| ||||||| |||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  24105750 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 24105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 477 - 556
Target Start/End: Complemental strand, 26769639 - 26769560
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 556  Q
    |||||||||| |||||| ||||||||| |||||||| |||||||||| |||||||||| || ||||||||||||| ||||    
T  26769639 atgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgaca 26769560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 630
Target Start/End: Original strand, 11223795 - 11223947
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || |||||| |||||||||||||| |||| |||||||||| |||||| ||||||||| ||||  |  ||||| ||||||| |    
T  11223795 atgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaatta 11223893  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 630  Q
    ||| ||||| || || ||||||| |||||   ||||| || ||| |||||||||    
T  11223894 tgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtcatgtc 11223947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 478 - 642
Target Start/End: Complemental strand, 17776714 - 17776551
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 577  Q
    ||||||||| |||||| ||||||||| | |||||||  ||||||||   ||||||||  |||||||| ||||||||||| ||| ||||| ||||| | ||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactgacttat 17776615  T
Q  578 gtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc--atgtccggtgtccgtgt 642  Q
    ||| ||||||  ||||||||  ||| ||| |||||||||   ||||||  |||||||||||||||||    
T  17776614 gtggttttcttaaattattattggtatcggtgtgtcagt---cgtgtctgatgtccggtgtccgtgt 17776551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 659
Target Start/End: Original strand, 24975257 - 24975429
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| || |||||||  |||||| ||||||||||  ||| ||||||||||| |||| ||||| |||  ||| | ||| ||||||| |    
T  24975257 atgaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaatta 24975355  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |  ||||||||| ||||||||||||||||   ||||||      ||||| |||||||||||||||  ||||||||||||||||    
T  24975356 tacgattttctcaaattattagcggtgtc---gtgtca------gtgtcgtgtccggtgtccgtgcctgtatctgtgcttcat 24975429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 37419871 - 37419727
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |  ||||||| |||||||||| ||||| | ||  |  ||||| |||||||      
T  37419871 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattt 37419772  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccg 621  Q
    ||||||||| || ||||||| ||  |||||  |||||||| ||||    
T  37419771 tgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 637
Target Start/End: Original strand, 21782746 - 21782909
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca----tataaaattatactga 572  Q
    |||||||||| ||||||  | |||||||||||||||||||| ||||| |||||||| |||||||| |||  |||| ||||     | | ||||| |||||    
T  21782746 atgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacacaacac-gacaccggcacataattacactga 21782844  T
Q  573 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    || ||||||||||||| |||||||||| ||||||  |||||||| |  ||||| ||||| |||||    
T  21782845 attatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtc 21782909  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 576 - 659
Target Start/End: Complemental strand, 31284077 - 31283994
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||||||||||| |||||||||| ||||||  |||| ||| | ||||| |||||||||||||||||  |||||||||||||||    
T  31284077 atgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcat 31283994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 660
Target Start/End: Complemental strand, 21616805 - 21616707
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcatt 660  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||| || |||||||| ||||  ||||| ||||  ||||| ||||||||||    
T  21616805 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcatt 21616707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 659
Target Start/End: Complemental strand, 18276564 - 18276467
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||   | ||||| || || || |||||||||||||||| |||||| |||||||||    
T  18276564 aattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatccgtgcttcat 18276467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 605
Target Start/End: Complemental strand, 4207984 - 4207857
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    ||||| || ||||||||||||||||| ||||||  |||||||| ||| |||||||||| |||||||||| || || |||| ||| ||||| ||| ||| |    
T  4207984 atgaaacatgaacactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaatta 4207886  T
Q  577 tgtgattttctcgaattattagcggtgtc 605  Q
    || | |||| || ||||||||| ||||||    
T  4207885 tgcgcttttttcaaattattagtggtgtc 4207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 15972990 - 15972922
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| ||| ||||||||||||  ||||||||| |||||||| |||||||||| ||||||||||    
T  15972990 atgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgaca 15972922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 505 - 659
Target Start/End: Complemental strand, 28678003 - 28677854
Alignment:
Q  505 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    |||||||| ||||||||||  |||||||| |||||||||||     |  ||||||||  ||| ||||||| |||||||||| || |||||||||||||||    
T  28678003 cgtgtccctgtgtcggacacttgtcgtgtttgacaccgacac----cgaacatataa--ttacactgaattatgtgattttttcaaattattagcggtgt 28677910  T
Q  605 cgatgtgtcagtatccgtgtca-tgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||  ||  |||| || |||||| |||||| ||| |||||| |||||||||||||||    
T  28677909 cggcgttccagtgtcagtgtcagtgtccgttgtacgtgtacgtatctgtgcttcat 28677854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 33519805 - 33519751
Alignment:
Q  586 ctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    |||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  33519805 ctcggattattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgt 33519751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 587
Target Start/End: Original strand, 36096306 - 36096416
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||||| || | || |||||||| ||||| |||| |||||||||| |||| ||||| ||||| |||| ||| ||||| |||| ||      
T  36096306 atgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattt 36096405  T
Q  577 tgtgattttct 587  Q
    |||||||||||    
T  36096406 tgtgattttct 36096416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 642
Target Start/End: Original strand, 36756274 - 36756440
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 575  Q
    ||||||||||  |||||| | ||||||| |||||  ||||||||||||||||| ||||  |||||  ||| ||||| ||||  || ||||| |||||||     
T  36756274 aatgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatt 36756373  T
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    |||| ||||  || |||||||||  ||||||| |||||||| || ||||| | |||| ||| |||||    
T  36756374 atgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgttcgtgt 36756440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 642
Target Start/End: Complemental strand, 28412393 - 28412313
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
    ||||| ||||||| |||||||||| || |||||||| |||||| || |||| ||| |||||||| |||| |||||||||||    
T  28412393 aattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgt 28412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 616
Target Start/End: Complemental strand, 31808134 - 31808066
Alignment:
Q  548 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    ||||||||| ||| ||||| ||||||| |||||||||| |  ||||||||||||||||| |||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagt 31808066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 38117101 - 38117165
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 541  Q
    |||||||||| |||| | ||||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  38117101 atgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacc 38117165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 477 - 536
Target Start/End: Original strand, 15907853 - 15907912
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctg 536  Q
    |||||||||| |||||| || |||| | ||||||||||||||||| ||||||||||||||    
T  15907853 atgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtctg 15907912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 15909572 - 15909618
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  15909572 atgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggaca 15909618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 632
Target Start/End: Original strand, 30404866 - 30404936
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    ||||| ||||||| |||||||||| || |||||||| | ||||||  |||||||| |||||||||||||||    
T  30404866 aattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 540
Target Start/End: Complemental strand, 35449626 - 35449561
Alignment:
Q  477 atgaagcacgaacactcttcggattaga--cgtgtcccggtgtcggacatgtgtcgtgtctgacac 540  Q
    |||||||||  |||||| ||||||||||  ||||| | ||||||||||||||||||||||||||||    
T  35449626 atgaagcacagacactcctcggattagagacgtgttctggtgtcggacatgtgtcgtgtctgacac 35449561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 606
Target Start/End: Original strand, 18889550 - 18889651
Alignment:
Q  506 gtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 604  Q
    |||||| ||||||||||||| |||| |||| |||||  ||| ||||| |||| |||  |||| ||||||| ||||||||||||| | |||||||||| ||    
T  18889550 gtgtccgggtgtcggacatgcgtcggtgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttctcaatttattagcggcgt 18889649  T
Q  605 cg 606  Q
    ||    
T  18889650 cg 18889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 545
Target Start/End: Complemental strand, 19942383 - 19942314
Alignment:
Q  476 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||| | |||||| ||||||||| |||||||||||||| ||||  || |||||| ||||||||||    
T  19942383 aatgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 624
Target Start/End: Original strand, 4882670 - 4882774
Alignment:
Q  520 gacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatc 619  Q
    ||||||| |||||||||||||||||| ||||  ||||  |  ||||| ||||||| || | ||||| || ||| ||||||||| |||| |||||||||||    
T  4882670 gacatgtatcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagtatc 4882769  T
Q  620 cgtgt 624  Q
     ||||    
T  4882770 tgtgt 4882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 5367289 - 5367241
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgaca 5367241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 654
Target Start/End: Original strand, 18054852 - 18054912
Alignment:
Q  594 attagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgc 654  Q
    |||||| ||||||| ||||| || ||| |||| |||||||||||||||| |||||||||||    
T  18054852 attagctgtgtcgacgtgtcggtgtccctgtcgtgtccggtgtccgtgtctgtatctgtgc 18054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 548
Target Start/End: Complemental strand, 27084375 - 27084315
Alignment:
Q  488 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatga 548  Q
    |||||| || |||||| |||||| |||||| ||||| |||||||||| |||||||||||||    
T  27084375 acactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatga 27084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 31018633 - 31018557
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 638  Q
    ||||| ||| ||||||||||||||||  ||||||||||||||| |  |||||||| ||| |||| | ||||||||||    
T  31018633 aattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 37559094 - 37559026
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||| |||||| ||||||||  ||||| ||||||||||||| |||||  ||| ||||||||||    
T  37559094 atgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgaca 37559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 21091839 - 21091772
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    ||||||||| |||||||||||| |||  ||||||||||||| |||| ||| | |||||||||| ||||    
T  21091839 tgaagcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgaca 21091772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 625
Target Start/End: Complemental strand, 39323307 - 39323244
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 625  Q
    ||||| ||||||| |||| ||||| || |||||||||||||||||| || ||||| ||||||||    
T  39323307 aattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 10535687 - 10535733
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 523  Q
    ||||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  10535687 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcagaca 10535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 632
Target Start/End: Complemental strand, 18589254 - 18589171
Alignment:
Q  547 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 632  Q
    |||||||||| ||| | ||| |||||||  ||| |||||||  |||||||||| ||||||  |||| |||||||||||||||||||    
T  18589254 gacactgacacatatagttagactgaattgtgtaattttct--aattattagcagtgtcggcgtgttagtatccgtgtcatgtccg 18589171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 659
Target Start/End: Original strand, 18631462 - 18631512
Alignment:
Q  609 gtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||| ||| |||||||| ||||||||||||||||  |||||||||||||||    
T  18631462 gtgttagtgtccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcat 18631512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 539
Target Start/End: Complemental strand, 19959943 - 19959881
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgaca 539  Q
    |||||||||  | |||||| |||||||||| ||| ||||||||||||  ||||||||||||||    
T  19959943 atgaagcaccgatactctttggattagacgcgtctcggtgtcggacacttgtcgtgtctgaca 19959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 630
Target Start/End: Original strand, 36409612 - 36409711
Alignment:
Q  529 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 628  Q
    |||||| |||||| ||||||||| |||| ||||  ||| ||| ||| |||||||||| || |||||| ||||||||||   ||| |||||||||||| ||    
T  36409612 cgtgtcagacaccaacatgacaccgacacataa--ttacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtg 36409709  T

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Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 606
Target Start/End: Original strand, 37411266 - 37411304
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  37411266 actgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 597
Target Start/End: Complemental strand, 2331900 - 2331802
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 596  Q
    ||||||| ||||||| |||||| |||| |||  ||| | ||||| |||| ||||| |||| |||||  || ||||||| ||||||||||||| |||||||    
T  2331900 ggattaggcgtgtcctggtgtcagacacgtgctgtgcccgacactgacacgacaccgacacataaa--tacactgaattatgtgattttctcaaattatt 2331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Complemental strand, 25846784 - 25846743
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtg 603  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||    
T  25846784 aattacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 29970566 - 29970619
Alignment:
Q  563 attatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 616  Q
    |||| ||||||  ||| ||||||||| |||||||||||||||| ||||||||||    
T  29970566 attacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagt 29970619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 497 - 642
Target Start/End: Complemental strand, 53288 - 53147
Alignment:
Q  497 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 596  Q
    |||||| |||||||||||||||||||| ||||| |||| |||||||||| | ||| ||||  || ||||| ||||||| ||||||||||||| |||||||    
T  53288 ggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T
Q  597 agcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 642  Q
     ||||| |||  |||||||    |||||| |||||||||| |||||    
T  53188 ggcggtatcggcgtgtcag----cgtgtcgtgtccggtgttcgtgt 53147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 606
Target Start/End: Original strand, 3780 - 3909
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||| | |||||| ||||||||| |||||| || |||||||||||||||||||| |||||| ||| ||||||||||  |  ||||| ||||||| |    
T  3780 atgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaatta 3879  T
Q  577 tgtgattttctcgaattattagcggtgtcg 606  Q
    ||||||||| |  |||||||| | ||||||    
T  3880 tgtgatttttttaaattattaaccgtgtcg 3909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 622
Target Start/End: Complemental strand, 92939 - 92790
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctga----caccgacatgacactgacatataaaattatactga 572  Q
    |||||||||| |||||| ||||||||| ||||||| |||||| ||||||||||||||| ||    |||| |||  | |||||||  |  ||||| |||||    
T  92939 atgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactga 92840  T
Q  573 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 622  Q
    || |||| |||||||| |||||||||||||||||  |||||||| |||||    
T  92839 attatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 477 - 556
Target Start/End: Complemental strand, 71853 - 71774
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 556  Q
    |||||||||  |||||| ||||||||| ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||    
T  71853 atgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgaca 71774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 529 - 658
Target Start/End: Complemental strand, 21119 - 20990
Alignment:
Q  529 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 628  Q
    ||||||||||||||||| || || |||| ||| |||||||| || | ||||||||||||| |||||||| | |||||    ||||||| |||||||| ||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtg 21020  T
Q  629 tccggtgtccgtgtatgtatctgtgcttca 658  Q
    || |||||||||||  ||||||||| ||||    
T  21019 tctggtgtccgtgttcgtatctgtgtttca 20990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 70394 - 70327
Alignment:
Q  478 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||| |||||||||| ||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgaca 70327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 538 - 640
Target Start/End: Complemental strand, 20239 - 20137
Alignment:
Q  538 caccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    |||||||| ||||||||||  |  ||||| ||||||| |||||||||| || |||||||||| ||||||  |||||| | |||||||| |||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 20140  T
Q  638 cgt 640  Q
    |||    
T  20139 cgt 20137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 507 - 605
Target Start/End: Original strand, 44486 - 44584
Alignment:
Q  507 tgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 605  Q
    |||||| |||||||||| |||| |||||  ||||||||| || || |||| ||| ||||| ||||||| ||||||||||||| |||| |||||||||||    
T  44486 tgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 661
Target Start/End: Original strand, 404 - 577
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||| | |||||||| ||||||     ||||||      |  ||||| |||||||      
T  404 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacacc-----gacact------tgtaattacactgaattt 492  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcatta 661  Q
    ||||||||| || |||||||||| ||||||  || ||||| |||||| | ||| ||||||||||||  ||||| |||||||||||    
T  493 tgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcatta 577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 3052 - 2979
Alignment:
Q  481 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactga 554  Q
    |||||| |||||| ||||||||| ||||| ||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactga 2979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 4823 - 4879
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 533  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  4823 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 13437 - 13365
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||| ||||||||||||| |||||||||  ||||||  |||||||| |||||||||| ||||||||||||    
T  13437 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgt 13365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 21890 - 21962
Alignment:
Q  568 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 640  Q
    ||||||| ||||||||||||| |||||||||  ||||||  |||||||| |||||||||| ||||||||||||    
T  21890 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgt 21962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 8915 - 8744
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 576  Q
    |||||||||| | |||| || |||||| |||||| |||||||||||| |||||||||| ||||||||||         | | |||  ||| ||| ||| |    
T  8915 atgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca---------cttgtaa--ttacactaaataa 8827  T
Q  577 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    | ||||||| || |||||||||| ||||||  |||||||| |||||||| ||||||||||||||||  |||||  ||||||||    
T  8826 tatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcat 8744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 659
Target Start/End: Complemental strand, 3340 - 3262
Alignment:
Q  581 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||  |||| |||||  |||||| ||||||||||||||||| |||||||||||||||| | |||| |||||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgtgtctatatccgtgcttcat 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 642
Target Start/End: Complemental strand, 8739 - 8629
Alignment:
Q  532 gtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtcc 631  Q
    ||||||||  |||| ||||| ||||  || ||||||||||||  |||||||||||   |||||||||  ||||||| |||||||| ||| |||| |||||    
T  8739 gtctgacatagacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtcc 8640  T
Q  632 ggtgtccgtgt 642  Q
    |||||||||||    
T  8639 ggtgtccgtgt 8629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 520 - 653
Target Start/End: Complemental strand, 1120 - 987
Alignment:
Q  520 gacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatc 619  Q
    ||||| ||| |||||  |||||||||  ||||||||| ||| | ||| ||||||| |||| ||||| || ||||||||||||||||| ||||||||  ||    
T  1120 gacatttgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtc 1021  T
Q  620 cgtgtcatgtccggtgtccgtgtatgtatctgtg 653  Q
     ||||| | | |||||| | ||| ||||||||||    
T  1020 tgtgtcgtatacggtgttcatgtttgtatctgtg 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 606
Target Start/End: Original strand, 84921 - 85033
Alignment:
Q  494 ttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatt 593  Q
    |||||||||| ||||||| | ||||||||| |||| ||||  |||| ||||||||||| |||||||| ||||| ||  ||| || |||||||||  ||||    
T  84921 ttcggattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaatt 85020  T
Q  594 attagcggtgtcg 606  Q
    | ||| |||||||    
T  85021 agtagtggtgtcg 85033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 576 - 659
Target Start/End: Original strand, 225298 - 225381
Alignment:
Q  576 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||| |||||||| |||||||| | ||||||  |||||||| |||||||| |||||||||||||||| ||| || ||| |||||    
T  225298 atgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgtttcat 225381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 659
Target Start/End: Original strand, 68210 - 68355
Alignment:
Q  514 gtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 613  Q
    |||||| |||| ||| ||||  |||||||| | ||||||||||  || ||||||||| ||| || |||||||||| |||||||| |||||   |||||||    
T  68210 gtgtcgaacatatgttgtgttcgacaccgatacgacactgacacctataattatactaaattatatgattttctcaaattattaacggtgctaatgtgtc 68309  T
Q  614 agtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| | |||  |||  |||||| || | ||||| ||||||||||    
T  68310 agtattcatgttgtgtttggtgtctgtttttgtatttgtgcttcat 68355  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 637
Target Start/End: Original strand, 178813 - 178910
Alignment:
Q  541 cgacatgacactgacatataaaattatactgaatcatg-tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 637  Q
    ||||||||||||||||  |  ||||| ||||||| ||| ||||||| || |||||||||  ||||||  |||||||| |||||||| |||||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 178910  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 14644 - 14580
Alignment:
Q  477 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 541  Q
    |||||||||| |||||| |  |||||| |||||| |||||||||||| |||||||||| ||||||    
T  14644 atgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

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Target: scaffold0188 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 659
Target Start/End: Complemental strand, 9565 - 9486
Alignment:
Q  580 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    |||||||||  ||||||||||||||   ||| ||||| ||| |||  |||||||||||||| | ||||||||||||||||    
T  9565 gattttctcatattattagcggtgtgagtgtctcagtgtccatgttgtgtccggtgtccgtttctgtatctgtgcttcat 9486  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 542 - 612
Target Start/End: Original strand, 135308 - 135378
Alignment:
Q  542 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 612  Q
    |||| ||||| |||| ||| ||||| || |||| ||||||||||||| |||||||||| |||||| |||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgt 135378  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 659
Target Start/End: Complemental strand, 130525 - 130428
Alignment:
Q  562 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgcttcat 659  Q
    ||||| ||||||| |||||||||| || || ||||| | ||||||   ||||| | |||||||| ||||||||||||||||  |||||  ||||||||    
T  130525 aattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcat 130428  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 545
Target Start/End: Original strand, 17539 - 17612
Alignment:
Q  472 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 545  Q
    |||| |||||||||| | ||||  | |||||| |||||||||||||||||||| | | |||||| |||||||||    
T  17539 tatctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggacatatattgtgtctaacaccgaca 17612  T

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