View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5554_low_17 (Length: 317)

Name: NF5554_low_17
Description: NF5554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5554_low_17
NF5554_low_17
[»] chr5 (30 HSPs)
chr5 (177-252)||(27814731-27814806)
chr5 (1-78)||(43348742-43348817)
chr5 (1-78)||(16823239-16823314)
chr5 (1-78)||(26525204-26525279)
chr5 (1-78)||(29390377-29390452)
chr5 (1-78)||(30772987-30773062)
chr5 (1-78)||(43358518-43358593)
chr5 (1-78)||(32304627-32304702)
chr5 (1-78)||(3631367-3631442)
chr5 (38-78)||(7440490-7440530)
chr5 (1-78)||(9737681-9737756)
chr5 (1-78)||(25701395-25701470)
chr5 (1-78)||(26296982-26297058)
chr5 (1-78)||(9596140-9596215)
chr5 (1-78)||(15374223-15374298)
chr5 (1-79)||(41084555-41084632)
chr5 (1-78)||(7440341-7440417)
chr5 (1-78)||(15374448-15374524)
chr5 (141-176)||(16823130-16823165)
chr5 (131-173)||(3631261-3631303)
chr5 (131-173)||(9737820-9737862)
chr5 (131-173)||(13013368-13013410)
chr5 (131-173)||(19577293-19577335)
chr5 (141-179)||(25701544-25701582)
chr5 (131-173)||(26525343-26525385)
chr5 (269-299)||(27814712-27814742)
chr5 (131-168)||(6229072-6229109)
chr5 (141-173)||(8074363-8074395)
chr5 (38-78)||(10925617-10925657)
chr5 (1-67)||(43358642-43358707)
[»] chr8 (38 HSPs)
chr8 (1-79)||(3886756-3886832)
chr8 (1-78)||(24797029-24797104)
chr8 (1-78)||(43117457-43117533)
chr8 (1-78)||(4697915-4697990)
chr8 (1-78)||(5590149-5590224)
chr8 (1-79)||(6316984-6317060)
chr8 (38-79)||(9830715-9830756)
chr8 (1-78)||(1098166-1098241)
chr8 (1-78)||(2317170-2317245)
chr8 (1-78)||(4231328-4231403)
chr8 (38-78)||(7012446-7012486)
chr8 (38-78)||(21434948-21434988)
chr8 (1-78)||(22658322-22658397)
chr8 (1-78)||(42556069-42556144)
chr8 (1-78)||(7413140-7413216)
chr8 (38-81)||(36060463-36060506)
chr8 (141-173)||(11635761-11635793)
chr8 (38-78)||(28564993-28565033)
chr8 (38-78)||(28572616-28572656)
chr8 (1-78)||(41388114-41388189)
chr8 (38-78)||(41837965-41838005)
chr8 (1-78)||(197311-197387)
chr8 (1-78)||(312148-312224)
chr8 (38-77)||(3659833-3659872)
chr8 (1-78)||(21435061-21435137)
chr8 (1-78)||(41169806-41169882)
chr8 (131-173)||(3659937-3659979)
chr8 (131-173)||(4231223-4231265)
chr8 (131-177)||(5590288-5590334)
chr8 (131-173)||(9830610-9830652)
chr8 (131-173)||(34934370-34934412)
chr8 (41-78)||(7242648-7242685)
chr8 (143-172)||(8994984-8995013)
chr8 (38-79)||(38567237-38567278)
chr8 (141-173)||(1183825-1183857)
chr8 (141-173)||(7012340-7012372)
chr8 (141-173)||(24797178-24797210)
chr8 (141-173)||(41838079-41838111)
[»] chr7 (34 HSPs)
chr7 (1-78)||(17166974-17167050)
chr7 (1-78)||(39976429-39976504)
chr7 (1-78)||(22723751-22723826)
chr7 (1-78)||(26873811-26873886)
chr7 (1-78)||(36358285-36358360)
chr7 (1-78)||(42241904-42241979)
chr7 (1-78)||(44467996-44468071)
chr7 (131-172)||(29502246-29502287)
chr7 (1-78)||(16834252-16834327)
chr7 (1-78)||(29075160-29075235)
chr7 (1-78)||(36675462-36675537)
chr7 (38-78)||(43859199-43859239)
chr7 (1-78)||(45350159-45350234)
chr7 (1-78)||(44724038-44724113)
chr7 (1-78)||(9624104-9624179)
chr7 (38-78)||(23469406-23469446)
chr7 (38-78)||(31065633-31065673)
chr7 (38-78)||(31428845-31428885)
chr7 (133-173)||(36358426-36358466)
chr7 (141-173)||(43859093-43859125)
chr7 (38-78)||(46027788-46027828)
chr7 (141-172)||(8727725-8727756)
chr7 (131-173)||(26873705-26873747)
chr7 (131-173)||(29662935-29662977)
chr7 (131-173)||(44724177-44724219)
chr7 (131-173)||(45350054-45350095)
chr7 (131-173)||(46027682-46027724)
chr7 (38-79)||(41367766-41367807)
chr7 (132-172)||(17166869-17166909)
chr7 (133-173)||(19692470-19692510)
chr7 (141-173)||(36675611-36675643)
chr7 (177-249)||(38058198-38058270)
chr7 (38-78)||(44142870-44142910)
chr7 (75-115)||(44724121-44724161)
[»] chr1 (38 HSPs)
chr1 (1-79)||(29170049-29170125)
chr1 (179-249)||(3743778-3743848)
chr1 (1-78)||(8086338-8086413)
chr1 (1-78)||(16692923-16692998)
chr1 (1-78)||(17285268-17285343)
chr1 (1-78)||(33012031-33012106)
chr1 (1-78)||(44052433-44052508)
chr1 (1-78)||(47561835-47561910)
chr1 (38-79)||(9042428-9042469)
chr1 (1-79)||(23177449-23177525)
chr1 (1-79)||(46224734-46224810)
chr1 (38-78)||(919719-919759)
chr1 (38-78)||(24790543-24790583)
chr1 (38-78)||(25299097-25299137)
chr1 (38-78)||(40428790-40428830)
chr1 (1-78)||(51139794-51139869)
chr1 (131-173)||(29169944-29169986)
chr1 (131-177)||(33012170-33012216)
chr1 (2-78)||(42372191-42372266)
chr1 (38-79)||(48708426-48708467)
chr1 (1-78)||(6849861-6849936)
chr1 (38-78)||(24544727-24544767)
chr1 (1-78)||(29981681-29981756)
chr1 (1-78)||(37125801-37125876)
chr1 (38-78)||(40567074-40567114)
chr1 (38-78)||(42372078-42372118)
chr1 (38-78)||(45836952-45836992)
chr1 (1-78)||(8086451-8086527)
chr1 (1-62)||(29055907-29055967)
chr1 (131-173)||(6849755-6849797)
chr1 (131-173)||(8530085-8530127)
chr1 (131-173)||(16693062-16693104)
chr1 (131-173)||(17285407-17285449)
chr1 (131-173)||(46224874-46224916)
chr1 (38-79)||(8530190-8530231)
chr1 (38-79)||(44317674-44317715)
chr1 (141-173)||(29981830-29981862)
chr1 (141-173)||(44052582-44052614)
[»] chr4 (39 HSPs)
chr4 (1-78)||(13233338-13233413)
chr4 (1-78)||(2654885-2654960)
chr4 (1-78)||(36584531-36584606)
chr4 (1-78)||(43564526-43564601)
chr4 (1-78)||(44134601-44134676)
chr4 (1-78)||(45670068-45670143)
chr4 (1-81)||(38141532-38141610)
chr4 (1-78)||(41832484-41832560)
chr4 (38-79)||(12700578-12700619)
chr4 (1-78)||(6755937-6756012)
chr4 (38-78)||(16925214-16925254)
chr4 (38-78)||(18491295-18491335)
chr4 (1-78)||(31664142-31664217)
chr4 (1-78)||(36954985-36955060)
chr4 (131-173)||(27270356-27270398)
chr4 (131-173)||(44134496-44134538)
chr4 (40-78)||(44745602-44745640)
chr4 (38-78)||(11650976-11651016)
chr4 (1-78)||(13613067-13613142)
chr4 (1-78)||(22647219-22647294)
chr4 (1-74)||(52581568-52581639)
chr4 (1-71)||(54795703-54795772)
chr4 (1-78)||(38141418-38141494)
chr4 (131-173)||(2655024-2655066)
chr4 (131-173)||(6755831-6755873)
chr4 (134-172)||(9046198-9046236)
chr4 (131-173)||(36584426-36584468)
chr4 (131-173)||(40228545-40228587)
chr4 (131-173)||(44817663-44817705)
chr4 (131-173)||(51001478-51001520)
chr4 (132-173)||(31581865-31581906)
chr4 (41-78)||(44817562-44817599)
chr4 (141-173)||(11651090-11651122)
chr4 (141-173)||(13857615-13857647)
chr4 (141-173)||(13869145-13869177)
chr4 (141-173)||(18491189-18491221)
chr4 (141-173)||(19653768-19653800)
chr4 (38-78)||(31581760-31581800)
chr4 (38-78)||(40228440-40228480)
[»] chr3 (31 HSPs)
chr3 (1-78)||(52202090-52202165)
chr3 (1-79)||(12251483-12251559)
chr3 (1-78)||(16908794-16908869)
chr3 (1-78)||(22729328-22729403)
chr3 (1-78)||(52571400-52571475)
chr3 (1-79)||(36633594-36633670)
chr3 (1-78)||(18163826-18163901)
chr3 (203-249)||(20195889-20195935)
chr3 (1-79)||(21259410-21259486)
chr3 (1-78)||(1092853-1092928)
chr3 (1-78)||(11232130-11232205)
chr3 (1-78)||(29126019-29126094)
chr3 (1-78)||(32270895-32270970)
chr3 (1-78)||(44254576-44254651)
chr3 (38-78)||(49657222-49657262)
chr3 (38-78)||(50527644-50527684)
chr3 (1-78)||(32270780-32270857)
chr3 (1-78)||(13594735-13594811)
chr3 (1-78)||(13594849-13594924)
chr3 (38-78)||(27742594-27742634)
chr3 (131-183)||(29126158-29126210)
chr3 (38-78)||(35083901-35083941)
chr3 (131-174)||(32271032-32271075)
chr3 (2-78)||(49169901-49169975)
chr3 (131-173)||(18163720-18163762)
chr3 (131-177)||(22729218-22729264)
chr3 (2-78)||(28952254-28952329)
chr3 (131-173)||(50527748-50527790)
chr3 (131-173)||(52571539-52571581)
chr3 (141-173)||(28952516-28952548)
chr3 (141-173)||(36633489-36633521)
[»] chr2 (36 HSPs)
chr2 (1-78)||(34983384-34983459)
chr2 (1-78)||(26293268-26293343)
chr2 (1-78)||(26860637-26860712)
chr2 (1-78)||(38763822-38763897)
chr2 (1-78)||(38527282-38527357)
chr2 (1-78)||(31392655-31392729)
chr2 (1-78)||(1021043-1021118)
chr2 (1-78)||(2249689-2249764)
chr2 (1-78)||(7366259-7366334)
chr2 (1-78)||(12995074-12995149)
chr2 (1-78)||(16194360-16194435)
chr2 (1-78)||(19283905-19283980)
chr2 (1-78)||(34494450-34494525)
chr2 (1-78)||(36436157-36436232)
chr2 (1-78)||(11764902-11764977)
chr2 (1-78)||(34983497-34983573)
chr2 (1-78)||(6749981-6750056)
chr2 (38-78)||(13615973-13616013)
chr2 (1-78)||(23869771-23869846)
chr2 (1-78)||(42016611-42016686)
chr2 (134-173)||(1115155-1115194)
chr2 (141-175)||(2076932-2076966)
chr2 (131-173)||(6750120-6750162)
chr2 (131-169)||(32099935-32099973)
chr2 (135-173)||(34494593-34494631)
chr2 (131-173)||(34983278-34983320)
chr2 (131-173)||(38527176-38527218)
chr2 (131-173)||(44545843-44545885)
chr2 (38-79)||(28745503-28745543)
chr2 (132-173)||(28745609-28745650)
chr2 (132-173)||(36436297-36436338)
chr2 (141-173)||(1021194-1021226)
chr2 (38-78)||(1115048-1115088)
chr2 (141-173)||(2249583-2249615)
chr2 (1-71)||(11935350-11935419)
chr2 (38-78)||(44545739-44545779)
[»] chr6 (17 HSPs)
chr6 (1-78)||(34127606-34127681)
chr6 (1-78)||(8560534-8560609)
chr6 (1-78)||(9079030-9079105)
chr6 (2-78)||(11450480-11450554)
chr6 (2-78)||(12698603-12698677)
chr6 (1-78)||(2660813-2660888)
chr6 (1-78)||(7021926-7022001)
chr6 (38-78)||(24130254-24130294)
chr6 (38-78)||(24635480-24635520)
chr6 (1-78)||(34023517-34023592)
chr6 (38-78)||(15469198-15469238)
chr6 (38-78)||(16461419-16461459)
chr6 (142-173)||(10290460-10290491)
chr6 (131-173)||(24130353-24130395)
chr6 (141-173)||(12698496-12698528)
chr6 (1-78)||(23259043-23259118)
chr6 (132-164)||(31969097-31969129)
[»] scaffold0978 (1 HSPs)
scaffold0978 (1-79)||(1211-1287)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-78)||(65042-65117)
scaffold0014 (131-173)||(64936-64978)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-78)||(331880-331955)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-78)||(11286-11361)
scaffold0131 (132-173)||(11169-11210)
[»] scaffold0050 (2 HSPs)
scaffold0050 (1-78)||(19154-19229)
scaffold0050 (131-178)||(19043-19090)


Alignment Details
Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 27814806 - 27814731
Alignment:
Q  177 gctatatctcgcgagagatattctcacgaattttcacaattgccgttttactttgtatttaacacgctagatagtt 252  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  27814806 gctatatctcgcgagagatattctcacgaattttcacgattgccgttttactttttatttaacacgctagatagtt 27814731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43348817 - 43348742
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  43348817 tataattgaattatttaaatttttggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 43348742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16823314 - 16823239
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  16823314 tataattgaattatttaaattttcggg---tgggtcactacaccactttgcaggaatttagatcaaccaaaacataaaa 16823239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26525204 - 26525279
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  26525204 tataattgaattatttaaattttcgga---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 26525279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29390452 - 29390377
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  29390452 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 29390377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30773062 - 30772987
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| ||||||||| ||||||||||||||||||    
T  30773062 tataattgaattatttaaatttttggg---tgggccactacaccactttgcaggaatttgaatcaaccaaaacataaaa 30772987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43358593 - 43358518
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  43358593 tataattgaattatttaaattttcggg---tgggtcactacactactttgcaggaatttggatcaaccaaaacataaaa 43358518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32304627 - 32304702
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||| |||||||||  || ||   ||||||||||||| ||||||||||||||||||||| ||||||    
T  32304627 tataattgaattatttcaatttttgg--gtgggccaatacaccactttgcaggaatttggatcaaccaaaatataaaa 32304702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3631442 - 3631367
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||| |||||||||||    
T  3631442 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaactaaaacataaaa 3631367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 7440490 - 7440530
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7440490 tacaccactttgcaggaatttggatcaaccaaaacataaaa 7440530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9737681 - 9737756
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||| |||||||||||    
T  9737681 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaacaaaaacataaaa 9737756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25701395 - 25701470
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||| |||||||||||||||||||    
T  25701395 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttagatcaaccaaaacataaaa 25701470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26296982 - 26297058
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||| |||  ||| |||| || ||||||||||||  ||||||||||||||||||||| |||||    
T  26296982 tataattgaattatttaaatattt--tggatgggccactacaccactttgcgggaatttggatcaaccaaaacctaaaa 26297058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9596140 - 9596215
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| || ||||||||||||| |||| ||||||    
T  9596140 tataattgaattatttaaatttttggg---tgggccactacaccactttgcagaaatttggatcaactaaaatataaaa 9596215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15374298 - 15374223
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcat-acaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||   |||| |||  ||| ||||||||||| | |||||| |||||||||||||||||||    
T  15374298 tataattgaattatttaaattt---gtgggtggaccattacaccactttgcaagaatttcgatcaaccaaaacataaaa 15374223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41084555 - 41084632
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||||  ||| |||| || ||||||||||||  | |||||||||||| |||||| ||||||    
T  41084555 tataattgaattatttaaattttt--tggatgggccactacaccactttgcggaaatttggatcaatcaaaacctaaaat 41084632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7440341 - 7440417
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||| |||| | |  |||| || ||||||| |||| |||||||||||||||||||||| |||||    
T  7440341 tataattgaattatttaaaattttcggg--tgggccactacaccaatttgcaggaatttggatcaaccaaaacctaaaa 7440417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15374524 - 15374448
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||    ||||||||| ||||||| ||||  |||||||||||||||| |||| |||||    
T  15374524 tataattgaattatttaaattttt--cagttgggtcactacaccaatttgcgggaatttggatcaaccgaaacctaaaa 15374448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 16823165 - 16823130
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgccattg 176  Q
    ||||||||||| ||||||||||||||||||||||||    
T  16823165 gtggcccaccccagcccatgaagggctccgccattg 16823130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 3631303 - 3631261
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  3631303 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 3631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 9737820 - 9737862
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  9737820 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 9737862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 13013368 - 13013410
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  13013368 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 13013410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 19577293 - 19577335
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | |||||||||| ||||||||||||||||||||||    
T  19577293 cgggtgggccgtggcccaccttagcccatgaagggctccgcca 19577335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 25701544 - 25701582
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgccattggct 179  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  25701544 gtggcccaccccagcccatgaagggctccgccactggct 25701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 26525343 - 26525385
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  26525343 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 26525385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 27814742 - 27814712
Alignment:
Q  269 cgctagatagttaacacactacctgcaacat 299  Q
    |||||||||||||||||||||||||||||||    
T  27814742 cgctagatagttaacacactacctgcaacat 27814712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 6229072 - 6229109
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctc 168  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  6229072 cgggtgggctgtggcccaccccagcccatgaagggctc 6229109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 8074363 - 8074395
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  8074363 gtggcccaccccagcccatgaagggctccgcca 8074395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 10925657 - 10925617
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||| |||||| |||||||||||    
T  10925657 tacaccactttgtaggaatttgaatcaactaaaacataaaa 10925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43358707 - 43358642
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaacc 67  Q
    ||||||||||||||||||||||||  ||| |||| || ||||||| ||||  ||||||||||||||||    
T  43358707 tataattgaattatttaaattttt--tgggtgggccactacaccaatttgcgggaatttggatcaacc 43358642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3886756 - 3886832
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||||||||||||||||||   |||| || |||||||||||| |||||||||||||||||||||||||||||    
T  3886756 tataattgaattatttaaatttttggt---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaat 3886832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24797029 - 24797104
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  24797029 tataattgaattatttaaatttttggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 24797104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43117533 - 43117457
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcat-acaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||| |  | |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  43117533 tataattgaattatttaaatttttcg--gatgggccattacaccactttgcaggaatttggatcaaccaaaacataaaa 43117457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4697990 - 4697915
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  4697990 tataattgaattatttaaattttcgga---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 4697915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5590149 - 5590224
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  5590149 tataattgaattatttaaattttgggg---tgggccactacaccactttgtaggaatttggatcaaccaaaacataaaa 5590224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6317060 - 6316984
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| | |||||||||||||||||||||||||||    
T  6317060 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaagaatttggatcaaccaaaacataaaat 6316984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 9830756 - 9830715
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  9830756 tacaccactttgcaggaatttggatcaaccaaaacataaaat 9830715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1098241 - 1098166
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||  ||||||||||||||||||||||||||||    
T  1098241 tataattgaattatttaaattttcggg---tgggccactacaccactttataggaatttggatcaaccaaaacataaaa 1098166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2317245 - 2317170
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcat-acaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| ||| ||||||||||| | ||||||||||||||||||||||||||    
T  2317245 tataattgaattatttaaattttcggg---tgggccattacaccactttgcatgaatttggatcaaccaaaacataaaa 2317170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4231403 - 4231328
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||| |||||||||||||||||||    
T  4231403 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttagatcaaccaaaacataaaa 4231328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 7012486 - 7012446
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7012486 tacaccactttgcaggaatttggatcaaccaaaacataaaa 7012446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 21434988 - 21434948
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  21434988 tacaccactttgcaggaatttggatcaaccaaaacataaaa 21434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22658322 - 22658397
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||| ||||||||||||    
T  22658322 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaatcaaaacataaaa 22658397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42556069 - 42556144
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || | |||||||||| ||||||||||||||||||||||||||||    
T  42556069 tataattgaattatttaaattttcggg---tgggccactgcaccactttgcaggaatttggatcaaccaaaacataaaa 42556144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7413216 - 7413140
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||  ||| |||| || ||||||||||||  |||||||||||||| |||||| |||||    
T  7413216 tataattgaattatttaaattttt--tgggtgggccactacaccactttgcgggaatttggatcaatcaaaacctaaaa 7413140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 36060506 - 36060463
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaattg 81  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  36060506 tacaccactttccaggaatttggatcaaccaaaacataaaattg 36060463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 11635793 - 11635761
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    |||||||||||||||||||||||||||||||||    
T  11635793 gtggcccaccctagcccatgaagggctccgcca 11635761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 28565033 - 28564993
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  28565033 tacaccactttgcaagaatttggatcaaccaaaacataaaa 28564993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 28572656 - 28572616
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  28572656 tacaccactttgcaagaatttggatcaaccaaaacataaaa 28572616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41388189 - 41388114
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||| ||| |||||||||||| |||||||||||| ||||||| |||||||    
T  41388189 tataattgaattatttaaattttcggg---tggatcactacaccactttgcaggaatttggataaaccaaatcataaaa 41388114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 41837965 - 41838005
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  41837965 tacaccactttgcatgaatttggatcaaccaaaacataaaa 41838005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 197387 - 197311
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||  ||| |||| || ||||||| |||| || |||||||||||||| |||| |||||    
T  197387 tataattgaattatttaaattttt--tggatgggccattacaccaatttgcagaaatttggatcaaccgaaacttaaaa 197311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 312224 - 312148
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||  ||| |||| || ||||||| |||| || |||||||||||||| |||| |||||    
T  312224 tataattgaattatttaaattttt--tggatgggccattacaccaatttgcagaaatttggatcaaccgaaacttaaaa 312148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 3659833 - 3659872
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaa 77  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  3659833 tacaccactttgcaggaatttggatcaaccaaaacgtaaa 3659872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21435137 - 21435061
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||| ||||  ||| |||| || ||||||| ||||  ||||||||||||||||||||| |||||    
T  21435137 tataattgaattatttaaactttt--tgggtgggccactacaccaatttgcgggaatttggatcaaccaaaacctaaaa 21435061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41169882 - 41169806
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||  ||| ||||||| ||||||||||||   |||||| |||||||| |||| |||||    
T  41169882 tataattgaattatttaaattttt--tggatgggtcactacaccactttgcgtgaatttagatcaacctaaacctaaaa 41169806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 3659937 - 3659979
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| |||||||||| || |||||||||||||||||||||    
T  3659937 cgggtgggctgtggcccatcccagcccatgaagggctccgcca 3659979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 4231265 - 4231223
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||||||||||||||||| |||||||    
T  4231265 cgggtgggccgtggcccaccctagcccatgaaggggtccgcca 4231223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 5590288 - 5590334
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgccattgg 177  Q
    ||||||| | ||||||||||| ||||||| |||||||||||||||||    
T  5590288 cgggtgggccgtggcccaccccagcccattaagggctccgccattgg 5590334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 9830652 - 9830610
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  9830652 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 9830610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 34934370 - 34934412
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  34934370 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 34934412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 7242648 - 7242685
Alignment:
Q  41 accactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  7242648 accattttgcaggaatttggatcaaccaaaacataaaa 7242685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 172
Target Start/End: Complemental strand, 8995013 - 8994984
Alignment:
Q  143 ggcccaccctagcccatgaagggctccgcc 172  Q
    ||||||||||||||||||||||||||||||    
T  8995013 ggcccaccctagcccatgaagggctccgcc 8994984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 38567278 - 38567237
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||| |||||| |||||||||||||||| ||||||||||||    
T  38567278 tacacaactttgcaggaatttggatcaacaaaaacataaaat 38567237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 1183857 - 1183825
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  1183857 gtggcccaccccagcccatgaagggctccgcca 1183825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 7012372 - 7012340
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  7012372 gtggcccaccccagcccatgaagggctccgcca 7012340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 24797178 - 24797210
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  24797178 gtggcccaccccagcccatgaagggctccgcca 24797210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 41838079 - 41838111
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  41838079 gtggcccaccccagcccatgaagggctccgcca 41838111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17167050 - 17166974
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||  ||| |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  17167050 tataattgaattatttaaattttt--tgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 17166974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39976504 - 39976429
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  39976504 tataattgaattatttaaattttcggg---tgggtcactacaccactttgtaggaatttggatcaaccaaaacataaaa 39976429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22723751 - 22723826
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  22723751 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 22723826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26873886 - 26873811
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  26873886 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 26873811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36358285 - 36358360
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||  || |||||||||||| ||||||||||||||||||||||||||||    
T  36358285 tataattgaattatttaaatttttggg---tggaccactacaccactttgcaggaatttggatcaaccaaaacataaaa 36358360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42241904 - 42241979
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    || |||| |||||||||||| ||||||||||||||||||||||||||||    
T  42241904 tataattgaattatttaaattttcggg---tgagtcactacaccactttgcaggaatttggatcaaccaaaacataaaa 42241979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44467996 - 44468071
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  44467996 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 44468071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 29502246 - 29502287
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcc 172  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  29502246 cgggtgggctgtggcccaccctagcccatgaagggctccgcc 29502287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16834252 - 16834327
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| || |||||||||||||||||||||||||    
T  16834252 tataattgaattatttaaattttcgga---tgggccactacaccactttgcagaaatttggatcaaccaaaacataaaa 16834327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29075160 - 29075235
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| | ||||||||||||||||||||||||||    
T  29075160 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaagaatttggatcaaccaaaacataaaa 29075235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36675462 - 36675537
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||| ||||||| ||||||||||||||||||||||||||||    
T  36675462 tataattgaattatttaaattttcggg---tgggccactacatcactttgcaggaatttggatcaaccaaaacataaaa 36675537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 43859239 - 43859199
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  43859239 tacaccactttgcaggaatttggatcaaccaaaacataaaa 43859199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45350234 - 45350159
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcat-acaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| ||| ||||||||||| || |||||||||||||||||||||||||    
T  45350234 tataattgaattatttaaattttcgga---tgggccattacaccactttgcagaaatttggatcaaccaaaacataaaa 45350159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44724038 - 44724113
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||  || ||    |||||||||||| |||||||| |||||||||||||||||||    
T  44724038 tataattgaattatttaaattttcgg--gtgggcctctacaccactttgcaggaatttagatcaaccaaaacataaaa 44724113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9624179 - 9624104
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcata-caccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||| ||||||||||||||||||    |||| || | |||||||||| ||||||||||||||||||||| ||||||    
T  9624179 tataattaaattatttaaatttttggg---tgggccacaacaccactttgtaggaatttggatcaaccaaaatataaaa 9624104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 23469406 - 23469446
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  23469406 tacaccactttgcaggaatttggatcaaccaaaatataaaa 23469446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 31065633 - 31065673
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  31065633 tacaccactttgcaggaatttggattaaccaaaacataaaa 31065673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 31428885 - 31428845
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  31428885 tacaccactttgcaggaatttggatcaatcaaaacataaaa 31428845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 36358426 - 36358466
Alignment:
Q  133 ggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  36358426 ggtggaccgtggcccaccccagcccatgaagggctccgcca 36358466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 43859125 - 43859093
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    |||||||||||||||||||||||||||||||||    
T  43859125 gtggcccaccctagcccatgaagggctccgcca 43859093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 46027828 - 46027788
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  46027828 tacaccactttgcaagaatttggatcaaccaaaacataaaa 46027788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 172
Target Start/End: Complemental strand, 8727756 - 8727725
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcc 172  Q
    ||||||||||||||||||||||||||||||||    
T  8727756 gtggcccaccctagcccatgaagggctccgcc 8727725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 26873747 - 26873705
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  26873747 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 26873705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 29662977 - 29662935
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | || ||||||||||||||||||||||||||||||    
T  29662977 cgggtgggccgtagcccaccctagcccatgaagggctccgcca 29662935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 44724177 - 44724219
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  44724177 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 44724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 45350095 - 45350054
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  45350095 cgggtggaccgtggcccaccc-agcccatgaagggctccgcca 45350054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 46027724 - 46027682
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||    
T  46027724 cgggtggaccgtggcccaccccagcccacgaagggctccgcca 46027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 41367807 - 41367766
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  41367807 tacaccactttgtagaaatttggatcaaccaaaatataaaat 41367766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 17166909 - 17166869
Alignment:
Q  132 gggtggactgtggcccaccctagcccatgaagggctccgcc 172  Q
    |||||| | ||||||||||| ||||||||||||||||||||    
T  17166909 gggtgggccgtggcccaccccagcccatgaagggctccgcc 17166869  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 19692510 - 19692470
Alignment:
Q  133 ggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| |||| |||||| |||||||||||||||||||||    
T  19692510 ggtggaccgtggtccaccccagcccatgaagggctccgcca 19692470  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 36675611 - 36675643
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  36675611 gtggcccaccccagcccatgaagggctccgcca 36675643  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 38058198 - 38058270
Alignment:
Q  177 gctatatctcgcgagagatattctcacgaattttcacaattgccgttttactttgtatttaacacgctagata 249  Q
    ||||||||||||||||| | ||||||| |||||| || |||||| |||| || | |||| |||||||| ||||    
T  38058198 gctatatctcgcgagaggttttctcacaaatttttacgattgcctttttcctatatattcaacacgctggata 38058270  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 44142910 - 44142870
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| |||||||||||||||  |||||||||||    
T  44142910 tacaccactttgcaggaatttggatcaaagaaaacataaaa 44142870  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 44724121 - 44724161
Alignment:
Q  75 aaaattgtataaaatatcacaaaataaacttataatagttg 115  Q
    ||||||||||||||| || |||||||||| |||||||||||    
T  44724121 aaaattgtataaaatctctcaaaataaacctataatagttg 44724161  T

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Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29170125 - 29170049
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||||||  || || |  |||||||||||| |||||||||||||||||||||||||||||    
T  29170125 tataattgaattatttaaatttttgg--gtgggctactacaccactttgtaggaatttggatcaaccaaaacataaaat 29170049  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 3743778 - 3743848
Alignment:
Q  179 tatatctcgcgagagatattctcacgaattttcacaattgccgttttactttgtatttaacacgctagata 249  Q
    ||||||||| || |||| || |||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  3743778 tatatctcgtgaaagattttttcacgaattttcacgattgccattttactatgtatttaacacgctagata 3743848  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8086413 - 8086338
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  8086413 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 8086338  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16692923 - 16692998
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  16692923 tataattgaattatttaaattttcggg---tgggccactacaccactttgtaggaatttggatcaaccaaaacataaaa 16692998  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17285268 - 17285343
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  17285268 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 17285343  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33012031 - 33012106
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  33012031 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 33012106  T

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Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44052433 - 44052508
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  44052433 tataattgaattatttaaattttcggg---tgggtcactacaccactttgtaggaatttggatcaatcaaaacataaaa 44052508  T

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Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47561910 - 47561835
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||||||   ||| ||| |||| ||||||| || |||||||||||||||||||||||||    
T  47561910 tataattgaattatttaaatttttggt---tggttcactacatcactttgcagtaatttggatcaaccaaaacataaaa 47561835  T

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Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 9042428 - 9042469
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  9042428 tacaccactttgtaggaatttggatcaaccaaaacataaaat 9042469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23177525 - 23177449
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| || |||||||||||||||||| |||||||    
T  23177525 tataattgaattatttaaatttttggg---tgggccactacaccactttgcagaaatttggatcaaccaaaatataaaat 23177449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 46224734 - 46224810
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||| ||||||||||||    
T  46224734 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaacaaaaacataaaat 46224810  T

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Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 919719 - 919759
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  919719 tacaccactttgcaggaatttggatcaaccaaaacataaaa 919759  T

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Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 24790583 - 24790543
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  24790583 tacaccactttgcaggaatttggatcaaccaaaacataaaa 24790543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 25299097 - 25299137
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  25299097 tacaccactttgcaggaatttggatcaaccaaaacataaaa 25299137  T

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Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 40428790 - 40428830
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  40428790 tacaccactttgcaggaatttggatcaaccaaaacataaaa 40428830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51139869 - 51139794
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| | ||||||||||||||||||||||||||    
T  51139869 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaagaatttggatcaaccaaaacataaaa 51139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 29169986 - 29169944
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  29169986 cgggtgggctgtggcccaccccagcccatgaagggctccgcca 29169944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 33012170 - 33012216
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgccattgg 177  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||    
T  33012170 cgggtgggccgtggcccaccccagcccatgaagggctccgccattgg 33012216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 42372266 - 42372191
Alignment:
Q  2 ataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||  ||| |||| || ||||||| |||| ||||||||||||||||| |||| |||||    
T  42372266 ataattgaattatttaaattttt--tgggtgggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaa 42372191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 48708426 - 48708467
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  48708426 tacaccactttgcaggaatttggatcaacaaaaacataaaat 48708467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6849936 - 6849861
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| || |||||| ||||||||||||||||||    
T  6849936 tataattgaattatttaaattttcggg---tgggccactacaccactttgtagaaatttgaatcaaccaaaacataaaa 6849861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 24544727 - 24544767
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  24544727 tacaccactttgcaggaatttggatcaaccaaagcataaaa 24544767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29981681 - 29981756
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||| ||||||||| |||||    
T  29981681 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggataaaccaaaacttaaaa 29981756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37125876 - 37125801
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||||||| |  ||||||||| |||||||||||||||||||||| |||||    
T  37125876 tataattgaattatttaaattttcggg---tgggtcactgtaccactttgcaggaatttggatcaaccaaaacgtaaaa 37125801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 40567114 - 40567074
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  40567114 tacaccactttgcaggaatttggatcaactaaaacataaaa 40567074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 42372118 - 42372078
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  42372118 tacaccactttgcaggaatttagatcaaccaaaacataaaa 42372078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 45836992 - 45836952
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  45836992 tacaccactttgcaggaatttagatcaaccaaaacataaaa 45836952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8086527 - 8086451
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||| |||  |||| || ||||||| ||||  |||||||||||||||| |||| |||||    
T  8086527 tataattgaattatttaaatttttcgtg--tgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaa 8086451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29055907 - 29055967
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtc-atacaccactttggaggaatttggat 62  Q
    ||||||||||||||||||||||||  |||||||| | ||||||||||||| || |||||||||    
T  29055907 tataattgaattatttaaattttt--tggttgggccaatacaccactttgcagaaatttggat 29055967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 6849797 - 6849755
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  6849797 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 6849755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 8530127 - 8530085
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  8530127 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 8530085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 16693062 - 16693104
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  16693062 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 16693104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 17285407 - 17285449
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  17285407 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 17285449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 46224874 - 46224916
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  46224874 cgggtggaccgtggcccaccccaacccatgaagggctccgcca 46224916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 8530231 - 8530190
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||| | |||||||||||||||| ||||||||||    
T  8530231 tacaccactttgcaagaatttggatcaaccagaacataaaat 8530190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 44317715 - 44317674
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  44317715 tacaccactttacaggaatttagatcaaccaaaacataaaat 44317674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 29981830 - 29981862
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  29981830 gtggcccaccccagcccatgaagggctccgcca 29981862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 44052582 - 44052614
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  44052582 gtggcccaccccagcccatgaagggctccgcca 44052614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13233413 - 13233338
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  13233413 tataattgaattatttaaatttttggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 13233338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2654885 - 2654960
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||| |||||||||||| ||    ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2654885 tataattgaactatttaaattttcgga---tgggtcactacaccactttgcaggaatttggatcaaccaaaacataaaa 2654960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36584606 - 36584531
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  36584606 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 36584531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43564601 - 43564526
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||| ||||||| ||||||||||||||||||||||||||||    
T  43564601 tataattgaattatttaaatttttgga---tggggcactacaacactttgcaggaatttggatcaaccaaaacataaaa 43564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44134676 - 44134601
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  44134676 tataattgaattatttaaattttcggg---tggatcactacaccactttgcaggaatttggatcaaccaaaacataaaa 44134601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45670143 - 45670068
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  45670143 tataattgaattatttaaattttcggg---tgggccactacaccactttgtaggaatttggatcaaccaaaacataaaa 45670068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38141532 - 38141610
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaattg 81  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||| ||||||||||||||    
T  38141532 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaacaaaaacataaaattg 38141610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41832560 - 41832484
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||  |||  ||| |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  41832560 tataattgaattatttaaaagttt--tgggtgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 41832484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 12700578 - 12700619
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  12700578 tacaccactttgcaggaatttggatcaaccaaaacataaaat 12700619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6756012 - 6755937
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||| |||||||||||    
T  6756012 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaacaaaaacataaaa 6755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 16925254 - 16925214
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  16925254 tacaccactttgtaggaatttggatcaaccaaaacataaaa 16925214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 18491335 - 18491295
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  18491335 tacaccactttgcaggaatttggatcaaccaaaacataaaa 18491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31664142 - 31664217
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||||||| |||||||    
T  31664142 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaatcataaaa 31664217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36954985 - 36955060
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| | ||||||||||||||||||||||||||    
T  36954985 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaagaatttggatcaaccaaaacataaaa 36955060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 27270398 - 27270356
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  27270398 cgggtgggctgtggcccaccccagcccatgaagggctccgcca 27270356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 44134538 - 44134496
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  44134538 cgggtggaccgtggcccaccccagcccatgaagggctccgcca 44134496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 44745602 - 44745640
Alignment:
Q  40 caccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44745602 caccactttgcaggaatttggatcaaccaaaacataaaa 44745640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 11650976 - 11651016
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  11650976 tacaccactttgcatgaatttggatcaaccaaaacataaaa 11651016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13613067 - 13613142
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcata-caccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||| ||||||||||||||||||    |||| || | |||||||||| ||||||||||||||||||||| ||||||    
T  13613067 tataattaaattatttaaatttttggg---tgggccacaacaccactttgtaggaatttggatcaaccaaaatataaaa 13613142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22647294 - 22647219
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| | |||||||||||||| |||| ||||||    
T  22647294 tataattgaattatttaaatttttggg---tgggccactacaccactttgcatgaatttggatcaacaaaaatataaaa 22647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52581639 - 52581568
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacat 74  Q
    ||||||||||||||||||||||||||    ||||  | |||||||||||| |||||||||||||||| |||||||    
T  52581639 tataattgaattatttaaatttttgga---tgggcgactacaccactttgcaggaatttggatcaactaaaacat 52581568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 54795703 - 54795772
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaa 71  Q
    ||||||||||||||||||||||||  ||| |||| || ||||||||||||  |||||||||||||| |||||    
T  54795703 tataattgaattatttaaattttt--tgggtgggccactacaccactttgcgggaatttggatcaatcaaaa 54795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38141418 - 38141494
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||   ||||||| || ||||||| ||||  |||||||||||||||| |||| |||||    
T  38141418 tataattgaattatttaaattttt--cggttgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaa 38141494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 2655024 - 2655066
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  2655024 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 2655066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 6755873 - 6755831
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  6755873 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 6755831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 9046198 - 9046236
Alignment:
Q  134 gtggactgtggcccaccctagcccatgaagggctccgcc 172  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  9046198 gtggattgtggcccaccctagcccatgaaggactccgcc 9046236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 36584468 - 36584426
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  36584468 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 36584426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 40228545 - 40228587
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  40228545 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 40228587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 44817663 - 44817705
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  44817663 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 44817705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 51001520 - 51001478
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  51001520 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 51001478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 31581865 - 31581906
Alignment:
Q  132 gggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  31581865 gggtggaccgtggcccaccccagcccatgaagggcttcgcca 31581906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 44817562 - 44817599
Alignment:
Q  41 accactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||| || |||||||||||||||||||||||||    
T  44817562 accactttgcagaaatttggatcaaccaaaacataaaa 44817599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 11651090 - 11651122
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  11651090 gtggcccaccccagcccatgaagggctccgcca 11651122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 13857647 - 13857615
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||||||||||||||||||| |||||    
T  13857647 gtggcccaccctagcccatgaagggcttcgcca 13857615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 13869177 - 13869145
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||||| |||||||||||||||||||    
T  13869177 gtggcccaccctaacccatgaagggctccgcca 13869145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 18491221 - 18491189
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  18491221 gtggcccaccccagcccatgaagggctccgcca 18491189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 19653768 - 19653800
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  19653768 gtggcccaccccagcccatgaagggctccgcca 19653800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 31581760 - 31581800
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||| |||||  ||||||||||||||||||||||||||||    
T  31581760 tacactactttacaggaatttggatcaaccaaaacataaaa 31581800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 40228440 - 40228480
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  40228440 tacaacactttgcaggaatttggatcaaccaaagcataaaa 40228480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 52202165 - 52202090
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    ||||||| |||||||||||| || |||||||||||||||||||||||||    
T  52202165 tataattgaattatttaaatttttggg---tgggtcactacaccactttgcagaaatttggatcaaccaaaacataaaa 52202090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12251483 - 12251559
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||||||||||||||||    
T  12251483 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaat 12251559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16908794 - 16908869
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || ||||||||||||  |||||||||||||||||||||||||||    
T  16908794 tataattgaattatttaaatttttggg---tgggccactacaccactttgctggaatttggatcaaccaaaacataaaa 16908869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22729403 - 22729328
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  22729403 tataattgaattatttaaattttgggg---tgggccactacaccactttgtaggaatttggatcaaccaaaacataaaa 22729328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 52571400 - 52571475
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||||     |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  52571400 tataattgaattatttaaatttttgag---tgggccactacaccactttgtaggaatttggatcaaccaaaacataaaa 52571475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36633670 - 36633594
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||| ||  || ||    |||||||||||| |||||||||||||||||||||||||||||    
T  36633670 tataattgaattatttaaattttcgg--gtgggccgctacaccactttgcaggaatttggatcaaccaaaacataaaat 36633594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18163901 - 18163826
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||  || |  |  |||||||||||| ||||||||||||||||||||||||||||    
T  18163901 tataattgaattatttaaattttcgg--gtggactactacaccactttgcaggaatttggatcaaccaaaacataaaa 18163826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 20195889 - 20195935
Alignment:
Q  203 cgaattttcacaattgccgttttactttgtatttaacacgctagata 249  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  20195889 cgaattttcacgattgccgttttactatgtatttaacacgctagata 20195935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21259410 - 21259486
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||| ||    ||| ||| |||||||||||| ||||||||| |||||||||||||||||||    
T  21259410 tataattgaattatttaaattttcggg---tggatcactacaccactttgcaggaatttgaatcaaccaaaacataaaat 21259486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1092853 - 1092928
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||  ||||||||||||||||||||||||||||    
T  1092853 tataattgaattatttaaattttcggg---tgggccactacaccactttacaggaatttggatcaaccaaaacataaaa 1092928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11232130 - 11232205
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| | ||||||||||||||||||||||||||    
T  11232130 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaagaatttggatcaaccaaaacataaaa 11232205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29126019 - 29126094
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||| |||||||||||||||||||    
T  29126019 tataattgaattatttaaattttcgga---tgggccactacaccactttgcaggaatttagatcaaccaaaacataaaa 29126094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32270895 - 32270970
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||| ||||||    
T  32270895 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaatataaaa 32270970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44254576 - 44254651
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||| ||||||||||||||||||    
T  44254576 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttgaatcaaccaaaacataaaa 44254651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 49657222 - 49657262
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  49657222 tacaccactttgcaggaatttggatcaaccaaaacataaaa 49657262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 50527644 - 50527684
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  50527644 tacaccactttgcaggaatttggatcaaccaaaacataaaa 50527684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32270780 - 32270857
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||| | ||| ||| || ||||||| |||| ||||||||||||||||| |||| |||||    
T  32270780 tataattgaattatttaaatttttcggggt-gggccactacaccaatttgcaggaatttggatcaaccgaaacctaaaa 32270857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13594735 - 13594811
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||| | ||||||    ||||||| ||||  |||||||||||||||| ||||||||||    
T  13594735 tataattgaattatttaaatttttcg-ggttggccactacaccaatttgcgggaatttggatcaaccgaaacataaaa 13594811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13594849 - 13594924
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||| |||| |||||||||||||    
T  13594849 tataattgaattatttaaattttcggg---tgggccactacaccactttgtaggaatttgaatcagccaaaacataaaa 13594924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 27742634 - 27742594
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  27742634 tacaccactttgcagaaatttggatcaaccaaaacataaaa 27742594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 29126158 - 29126210
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgccattggctatat 183  Q
    ||||||| | ||||||||||| ||||||||||||||||||||| || ||||||    
T  29126158 cgggtgggccgtggcccaccccagcccatgaagggctccgccactgtctatat 29126210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 35083941 - 35083901
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  35083941 tacaccactttacaggaatttggatcaaccaaaacataaaa 35083901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 32271032 - 32271075
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgccat 174  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||    
T  32271032 cgggtgggctgtggcccaccccagcccatgaaaggctccgccat 32271075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 49169975 - 49169901
Alignment:
Q  2 ataattgaattatttaaatttttggtggttgggtcat-acaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||| ||    |||| ||| ||||||||||| || |||| ||||||||||||||||||||    
T  49169975 ataattgaattatttaaattttcggg---tgggccattacaccactttgcagaaattcggatcaaccaaaacataaaa 49169901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 18163762 - 18163720
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  18163762 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 18163720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 22729264 - 22729218
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgccattgg 177  Q
    ||||||| | ||||||||||| ||||||| |||||||||||||||||    
T  22729264 cgggtgggccgtggcccaccccagcccattaagggctccgccattgg 22729218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 28952254 - 28952329
Alignment:
Q  2 ataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||||  ||| |||| || ||||||| ||||  |||||||||||||||| |||| |||||    
T  28952254 ataattgaattatttaaattttt--tgggtgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaa 28952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 50527748 - 50527790
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  50527748 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 50527790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 52571539 - 52571581
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  52571539 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 52571581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 28952516 - 28952548
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  28952516 gtggcccaccccagcccatgaagggctccgcca 28952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 36633521 - 36633489
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  36633521 gtggcccaccccagcccatgaagggctccgcca 36633489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34983459 - 34983384
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  34983459 tataattgaattatttaaatttttgga---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 34983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26293343 - 26293268
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  26293343 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 26293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26860637 - 26860712
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| || |||||||||||||||||||||||||    
T  26860637 tataattgaattatttaaatttttggg---tgggccactacaccactttgtagaaatttggatcaaccaaaacataaaa 26860712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38763897 - 38763822
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  38763897 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 38763822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38527357 - 38527282
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||  || || |  |||||||||||| ||||||||||||||||||| ||||||||    
T  38527357 tataattgaattatttaaattttcgg--gtgggctactacaccactttgcaggaatttggatcaaccaagacataaaa 38527282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31392729 - 31392655
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||| ||||||||| |||||    | || |||||||||||| ||||||||||||||||||||||||||||    
T  31392729 tataattgaattacttaaattttgggtgg----gccactacaccactttgcaggaatttggatcaaccaaaacataaaa 31392655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1021043 - 1021118
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||||||| |||||||    
T  1021043 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaatcataaaa 1021118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2249764 - 2249689
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||| |||||||||||||||||||    
T  2249764 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttagatcaaccaaaacataaaa 2249689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7366334 - 7366259
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||| ||||||||||||    
T  7366334 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaagcaaaacataaaa 7366259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12995149 - 12995074
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || ||||||| |||| ||||||||||||||||||||||||||||    
T  12995149 tataattgaattatttaaattttcggg---tgggccactacaccaatttgtaggaatttggatcaaccaaaacataaaa 12995074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16194435 - 16194360
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || ||||||||| || ||||||||||||||||||||||||||||    
T  16194435 tataattgaattatttaaattttcggg---tgggccactacaccactctgcaggaatttggatcaaccaaaacataaaa 16194360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19283905 - 19283980
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||| |||||||||||||||||||    
T  19283905 tataattgaattatttaaattttcggg---tgggacactacaccactttgcaggaatttagatcaaccaaaacataaaa 19283980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34494450 - 34494525
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||| |||||||||||    
T  34494450 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaacaaaaacataaaa 34494525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36436157 - 36436232
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||| ||||||||||||    
T  36436157 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaagcaaaacataaaa 36436232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11764977 - 11764902
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||| ||  |||  || |||||||||||| ||||||||| ||||||||||||||||||    
T  11764977 tataattgaattatttaaatttttg-tg--tggaccactacaccactttgcaggaatttgaatcaaccaaaacataaaa 11764902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34983573 - 34983497
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||  ||| ||||||| ||||||| ||||  |||||||||||||||| |||| |||||    
T  34983573 tataattgaattatttaaattttt--tgggtgggtcactacaccaatttgctggaatttggatcaaccgaaacctaaaa 34983497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6749981 - 6750056
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    ||| ||| |||||||||||| || |||||||||||| ||||||||||||    
T  6749981 tataattgaattatttaaattttcggg---tggatcactacaccactttgcagaaatttggatcaatcaaaacataaaa 6750056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 13615973 - 13616013
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  13615973 tacaccattttgcaggaatttggatcaaccaaaacataaaa 13616013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23869846 - 23869771
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || ||||| |||||| | ||||||||||||||||||||||||||    
T  23869846 tataattgaattatttaaattttcggg---tgggccactacactactttgcaagaatttggatcaaccaaaacataaaa 23869771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42016686 - 42016611
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || | || || |||| ||||||||||||||||||||||||||||    
T  42016686 tataattgaattatttaaatttttggg---tgggccactgcatcaatttgcaggaatttggatcaaccaaaacataaaa 42016611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 1115155 - 1115194
Alignment:
Q  134 gtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  1115155 gtggaccgtggcccaccccagcccatgaagggctccgcca 1115194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 2076966 - 2076932
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgccatt 175  Q
    |||||||||||||||| ||||||||||||||||||    
T  2076966 gtggcccaccctagccaatgaagggctccgccatt 2076932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 6750120 - 6750162
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  6750120 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 6750162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 32099973 - 32099935
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctcc 169  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  32099973 cgggtgggttgtggcccaccctagcccatgaagggctcc 32099935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 34494593 - 34494631
Alignment:
Q  135 tggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  34494593 tggaccgtggcccaccctagcccatgatgggctccgcca 34494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 34983320 - 34983278
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  34983320 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 34983278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 38527218 - 38527176
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  38527218 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 38527176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 44545843 - 44545885
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  44545843 cgggtggaccgtggcccaccccaacccatgaagggctccgcca 44545885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 28745503 - 28745543
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    |||||||||||| |||||||||||| ||||||||||||||||    
T  28745503 tacaccactttgcaggaatttggat-aaccaaaacataaaat 28745543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 28745609 - 28745650
Alignment:
Q  132 gggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    |||||| | ||||||||||| |||||||||||||||||||||    
T  28745609 gggtgggccgtggcccaccccagcccatgaagggctccgcca 28745650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 36436297 - 36436338
Alignment:
Q  132 gggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    |||||| | ||||||||||| |||||||||||||||||||||    
T  36436297 gggtgggccgtggcccaccccagcccatgaagggctccgcca 36436338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 1021194 - 1021226
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  1021194 gtggcccaccccagcccatgaagggctccgcca 1021226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 1115048 - 1115088
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| || ||||||||||||||||| |||||||    
T  1115048 tacaccactttgcagaaatttggatcaaccaaatcataaaa 1115088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 2249615 - 2249583
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  2249615 gtggcccaccccagcccatgaagggctccgcca 2249583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11935350 - 11935419
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaa 71  Q
    ||||||||||||||||||||||||  ||| |||| || |||||||||||    |||||||||||||||||||    
T  11935350 tataattgaattatttaaattttt--tgggtgggccactacaccactttacgagaatttggatcaaccaaaa 11935419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 44545739 - 44545779
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| | ||||||||||||||||||| ||||||    
T  44545739 tacaccactttgcaagaatttggatcaaccaaaatataaaa 44545779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34127681 - 34127606
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||  || |||   |||||||||||| |||||||||||||||||||| |||||||    
T  34127681 tataattgaattatttaaatttttgg--gtggggcattacaccactttgcaggaatttggatcaaccaaatcataaaa 34127606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8560609 - 8560534
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  8560609 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 8560534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9079030 - 9079105
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  9079030 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 9079105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 11450480 - 11450554
Alignment:
Q  2 ataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  11450480 ataattgaattatttaaattttcgga---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 11450554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 12698677 - 12698603
Alignment:
Q  2 ataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  12698677 ataattgaattatttaaattttcgga---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 12698603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2660813 - 2660888
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||| |||||||||||||    
T  2660813 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcatccaaaacataaaa 2660888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7022001 - 7021926
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||| ||||||| ||||||||||||||||||||||||||||    
T  7022001 tataattgaattatttaaattttcggg---tgggccactacatcactttgcaggaatttggatcaaccaaaacataaaa 7021926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 24130254 - 24130294
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  24130254 tacaccactttgcaggaatttggatcaaccaaaacataaaa 24130294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 24635480 - 24635520
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  24635480 tacaccactttgcaggaatttggatcaaccaaaacataaaa 24635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34023517 - 34023592
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||||||||||| || ||||| |||||||||||||||||||    
T  34023517 tataattgaattatttaaatttttggg---tgggacactacaccactttgcagaaatttagatcaaccaaaacataaaa 34023592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 15469238 - 15469198
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  15469238 tacaccactttgcaggaatttggatcaatcaaaacataaaa 15469198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 16461419 - 16461459
Alignment:
Q  38 tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  16461419 tacacaactttgaaggaatttggatcaaccaaaacataaaa 16461459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 173
Target Start/End: Complemental strand, 10290491 - 10290460
Alignment:
Q  142 tggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||||||||||||||||||||||||    
T  10290491 tggcccaccctagcccatgaagggctccgcca 10290460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 24130353 - 24130395
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  24130353 cgggtgggcagtggcccaccccagcccatgaagggctccgcca 24130395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 12698528 - 12698496
Alignment:
Q  141 gtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||||||| |||||||||||||||||||||    
T  12698528 gtggcccaccccagcccatgaagggctccgcca 12698496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23259043 - 23259118
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || |||| || |||| || |||||| ||||||||||||||||||    
T  23259043 tataattgaattatttaaatttttggg---tgggccactacaacattttgcagaaatttgaatcaaccaaaacataaaa 23259118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 31969097 - 31969129
Alignment:
Q  132 gggtggactgtggcccaccctagcccatgaagg 164  Q
    |||||| ||||||||||||||||||||||||||    
T  31969097 gggtgggctgtggcccaccctagcccatgaagg 31969129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1287 - 1211
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaat 79  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||||||||||||||||||||    
T  1287 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaat 1211  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 65117 - 65042
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| ||||||||||||||||||||||||||||    
T  65117 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggatcaaccaaaacataaaa 65042  T

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Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 64978 - 64936
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  64978 cgggtgggccgtggcccaccccagcccatgaagggctccgcca 64936  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 331955 - 331880
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtcatacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||  || |  |  |||||||||||| ||||||||||||||||||||||||||||    
T  331955 tataattgaattatttaaattttcgg--gtggactactacaccactttgcaggaatttggatcaaccaaaacataaaa 331880  T

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Target: scaffold0131 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11361 - 11286
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||||||    |||| || || ||||||||| | ||||||||||||||||||||||||||    
T  11361 tataattgaattatttaaatttttgga---tgggccactataccactttgcacgaatttggatcaaccaaaacataaaa 11286  T

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Target: scaffold0131; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 11210 - 11169
Alignment:
Q  132 gggtggactgtggcccaccctagcccatgaagggctccgcca 173  Q
    |||||| | ||||||||||| |||||||||||||||||||||    
T  11210 gggtgggccgtggcccaccccagcccatgaagggctccgcca 11169  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19229 - 19154
Alignment:
Q  1 tataattgaattatttaaatttttggtggttgggtca-tacaccactttggaggaatttggatcaaccaaaacataaaa 78  Q
    ||||||||||||||||||||||| ||    |||| || |||||||||||| |||||||||||| |||||||||||||||    
T  19229 tataattgaattatttaaattttcggg---tgggccactacaccactttgcaggaatttggataaaccaaaacataaaa 19154  T

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Target: scaffold0050; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 19090 - 19043
Alignment:
Q  131 cgggtggactgtggcccaccctagcccatgaagggctccgccattggc 178  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  19090 cgggtgggccgtggcccaccccagcccatgaagggctccgccattggc 19043  T

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