View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5554_low_6 (Length: 566)
Name: NF5554_low_6
Description: NF5554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5554_low_6 |
 |  |
|
| [»] scaffold0043 (2 HSPs) |
 |  |  |
|
| [»] scaffold0257 (1 HSPs) |
 |  |  |
|
| [»] scaffold0978 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 464; Significance: 0; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 19 - 559
Target Start/End: Complemental strand, 27392228 - 27391691
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27392228 |
aaagtcaatattccaaatctgaaatttgtagcatttgtcaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
27392129 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctctctgacttcagcaataacaaaagatgtcagtagttacactctttttagcgattattggaaggaaggtacacactatat |
218 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
27392128 |
tacaaagttgtcgagaactctctctgacttcagcaataacaaaagatgtcagtagttacactctttttaacgattattgggaggaaggtacacactatat |
27392029 |
T |
 |
| Q |
219 |
atatatcatacagtaatggactagatttttggatgtttttaaccctttttcttaccatgaactacacaagagttatacacatttctgtcaatatctaata |
318 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27392028 |
at----catacagtaatggactagatttttggatgtttttaaccctttttcttaccatgaactacacaagagttatacacatttctgtcaatatctaata |
27391933 |
T |
 |
| Q |
319 |
aattataccgtttggttaaaggatataaacaattgaggcttctaaattagtggtatgcatgcatgagtacggcaaaactaaaatgtactatctaattgaa |
418 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27391932 |
aattataccctttggttaaaggatataaacaattgaggcttctaaattagtggtatgcatgcatgagtacggcaaaactaaaatgtactatctaattgaa |
27391833 |
T |
 |
| Q |
419 |
gctttaattttatattaagtataaaagtact-nnnnnnnttattaggcatataacattgttgtacatataaacttgtaaatgattatttaccgttgaaag |
517 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27391832 |
gctttaattttatataaagtataaaagtactaaaaaaaattattaggtatataacattgttgtacatataaacttgtaaatgattatttaccgttgaaag |
27391733 |
T |
 |
| Q |
518 |
tggacatttagttttattactatgcttactatatgatgatgt |
559 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27391732 |
tggacatttagttttattactatgcttactatataatgatgt |
27391691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 18026461 - 18026326
Alignment:
| Q |
20 |
aagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgttttat |
119 |
Q |
| |
|
||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||| ||||||||||||| |||| || | |||||| ||| |
|
|
| T |
18026461 |
aagtcaatattccaaatctgagatatgtagcatttctcaacctaccaagcctcagccagacccaaagaattcattttcaggcagtacaaaatcgttctat |
18026362 |
T |
 |
| Q |
120 |
acaaagttgtcaagaactctctctgacttcagcaat |
155 |
Q |
| |
|
|| | |||||||||||||||||||||| |||||||| |
|
|
| T |
18026361 |
actacgttgtcaagaactctctctgacatcagcaat |
18026326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 12146286 - 12146414
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| || | || | ||||| ||| |
|
|
| T |
12146286 |
aaagtcaatattccaaaactggaatttgtagcatttgtcaacctaccaagtctctgccagactcaaggaattcattttcaggctgtacaaaatcgtatta |
12146385 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctctctgact |
147 |
Q |
| |
|
| |||| |||||||||||||||||||||| |
|
|
| T |
12146386 |
tccaaaattgtcaagaactctctctgact |
12146414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 27347673 - 27347801
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||| || | || | ||||| || |
|
|
| T |
27347673 |
aaagtcaatattccaaaactgaaatttgcagcatttgtcaaccttccaagcctctaccagacccaaggaattcattttcaggctgtacaaaatcgtattg |
27347772 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctctctgact |
147 |
Q |
| |
|
| |||| |||||||||||||||||||||| |
|
|
| T |
27347773 |
tccaaaattgtcaagaactctctctgact |
27347801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 27376469 - 27376591
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| || | || | ||||| || |
|
|
| T |
27376469 |
aaagtcaatatgccaaatctaaaacttgtagcatttgtcaacctaccaagtctctgccagactcaaggaattcattttcaggctgtacaaaatcgtattg |
27376568 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctct |
141 |
Q |
| |
|
| ||| |||||||||||||||| |
|
|
| T |
27376569 |
tcaaaaattgtcaagaactctct |
27376591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 296 - 368
Target Start/End: Original strand, 27347963 - 27348035
Alignment:
| Q |
296 |
cacatttctgtcaatatctaataaattataccgtttggttaaaggatataaacaattgaggcttctaaattag |
368 |
Q |
| |
|
||||||| | |||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27347963 |
cacatttatctcaagatctaataaattattccctttggttaaaggatataaacaattgaagcttctaaattag |
27348035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 27975979 - 27976066
Alignment:
| Q |
292 |
tatacacatttctgtcaatatctaataaattataccgtttggttaaaggatataaacaattgaggcttctaaattagtggtatgcatg |
379 |
Q |
| |
|
|||||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||| | |||||| ||| |||||||||| |
|
|
| T |
27975979 |
tatacacaattctctcaagatctaataaattatactatttggttaaaggatataaacaattgaagaatctaaagtagaggtatgcatg |
27976066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 17746165 - 17746025
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
|||||||||||||| || |||||| |||| |||||||| |||||||||||||| | || | ||||||||||| |||||||| | | | ||||||| | |
|
|
| T |
17746165 |
aaagtcaatattccgaaactgaaagttgtggcatttgtcaacctaccaagcctttgtcaagctcaaggaattcaatttcaagctgtaaaacatcgtttca |
17746066 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctctctgacttcagcaataaca |
159 |
Q |
| |
|
||| | ||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
17746065 |
tacggaattgtcaaaaactctctctggcttcagcaacaaca |
17746025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 19047485 - 19047345
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
|||||||||||||| || |||||| |||| |||||||| |||||||||||||| | || | ||||||||||| |||||||| | | | ||||||| | |
|
|
| T |
19047485 |
aaagtcaatattccgaaactgaaagttgtggcatttgtcaacctaccaagcctttgtcaagctcaaggaattcaatttcaagctgtaaaacatcgtttca |
19047386 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctctctgacttcagcaataaca |
159 |
Q |
| |
|
||| | ||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
19047385 |
tacggaattgtcaaaaactctctctggcttcagcaacaaca |
19047345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 12146748 - 12146807
Alignment:
| Q |
486 |
taaacttgtaaatgattatttaccgttgaaagtggacatttagttttattactatgctta |
545 |
Q |
| |
|
|||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
12146748 |
taaatttgaaaatgatgatttacagttgaaagtggacatttagttttattactatgctta |
12146807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 27376824 - 27376907
Alignment:
| Q |
296 |
cacatttctgtcaatatctaataaattataccgtttggttaaaggatataaacaattgaggcttctaaattagtggtatgcatg |
379 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||| | |||||||| |
|
|
| T |
27376824 |
cacatttctcacaagatctaataaattataccagttggttaaagggtataaacaattaaagcttctaaattagagctatgcatg |
27376907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 28132221 - 28132351
Alignment:
| Q |
28 |
attccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgttttatacaaagtt |
127 |
Q |
| |
|
||||||||||||||| ||||| ||||| || ||||||||||||| || |||| |||||||| ||||||| | | | ||||||| ||||| | || |
|
|
| T |
28132221 |
attccaaatctgaaagttgtaatatttgaaaatctaccaagcctcaatcatgcccagggaattcaatttcaagatgtaaaacatcgtttcatacagaatt |
28132320 |
T |
 |
| Q |
128 |
gtcaagaactctctctgacttcagcaataac |
158 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |
|
|
| T |
28132321 |
gtcaaaaactctctctgacttcagcaataac |
28132351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 26142257 - 26142187
Alignment:
| Q |
28 |
attccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttca |
98 |
Q |
| |
|
||||||||||||| | ||||||||||||| ||||||||||| ||| |||| |||| |||||||||||||| |
|
|
| T |
26142257 |
attccaaatctgagagttgtagcatttgtcaacctaccaaggctctgccatgcccagggaattcattttca |
26142187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 28082028 - 28082140
Alignment:
| Q |
42 |
atttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgttttatacaaagttgtcaagaactctct |
141 |
Q |
| |
|
|||||||| ||||| || || ||||||||| | || ||||||||||||| ||| |||| | | |||||||||| ||||| | ||||||| |||||||| |
|
|
| T |
28082028 |
atttgtagtatttgaaaatcttccaagcctctgtcatgcccaaggaattcaatttgaagctgtaacatatcgtttcatacagaattgtcaaaaactctct |
28082127 |
T |
 |
| Q |
142 |
ctgacttcagcaa |
154 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
28082128 |
ctggcttcagcaa |
28082140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 543
Target Start/End: Complemental strand, 18025834 - 18025788
Alignment:
| Q |
497 |
atgattatttaccgttgaaagtggacatttagttttattactatgct |
543 |
Q |
| |
|
||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
18025834 |
atgatgatttacggttgaaagtggacattttgttttattactatgct |
18025788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 11419370 - 11419423
Alignment:
| Q |
311 |
atctaataaattataccgtttggttaaaggatataaacaattgaggcttctaaa |
364 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| |||||||||||| | ||||||| |
|
|
| T |
11419370 |
atctgataaattataccatttggttaaaggacataaacaattgaagtttctaaa |
11419423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 28053746 - 28053871
Alignment:
| Q |
28 |
attccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgttttatacaaagtt |
127 |
Q |
| |
|
||||||||||| ||| |||||| ||||| || |||||||||||||| || ||| |||||||| |||||||| | | | ||||||| |||| | || |
|
|
| T |
28053746 |
attccaaatctaaaacttgtagtatttgaaaatctaccaagcctcagtcatgaccagggaattcaatttcaagctgtaaaacatcgtttcatactgaatt |
28053845 |
T |
 |
| Q |
128 |
gtcaagaactctctctgacttcagca |
153 |
Q |
| |
|
||||| |||| ||||||||||||||| |
|
|
| T |
28053846 |
gtcaaaaactatctctgacttcagca |
28053871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 28064171 - 28064296
Alignment:
| Q |
28 |
attccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgttttatacaaagtt |
127 |
Q |
| |
|
||||||||||| ||| |||||| ||||| || |||||||||||||| || ||| |||||||| |||||||| | | | ||||||| |||| | || |
|
|
| T |
28064171 |
attccaaatctaaaacttgtagtatttgaaaatctaccaagcctcagtcatgaccagggaattcaatttcaagctgtaaaacatcgtttcatactgaatt |
28064270 |
T |
 |
| Q |
128 |
gtcaagaactctctctgacttcagca |
153 |
Q |
| |
|
||||| |||| ||||||||||||||| |
|
|
| T |
28064271 |
gtcaaaaactatctctgacttcagca |
28064296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 54716 - 54588
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| || | || | |||||||| |
|
|
| T |
54716 |
aaagtcaatcttccaaatctgaaagttgtagcatttaccaaccttccaagcctctaccagacccaaggaattcattttcaggctgtacaaaatcgttttg |
54617 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctctctgact |
147 |
Q |
| |
|
| |||| |||||||||||||||||||||| |
|
|
| T |
54616 |
tccaaaattgtcaagaactctctctgact |
54588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 54417 - 54340
Alignment:
| Q |
296 |
cacatttctgtcaatatctaataaattataccgtttggttaaaggatataaacaattgaggcttctaaattagtggta |
373 |
Q |
| |
|
||||||| | |||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
54417 |
cacatttatctcaagatctaataaattattcccgttggttaaaggatataaacaattgaagcttctaaattagaggta |
54340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 22391391 - 22391522
Alignment:
| Q |
19 |
aaagtcaatattccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgtttta |
118 |
Q |
| |
|
||||||||||| |||||||| ||| ||||| ||||||| ||||||||||||||| |||||||||| |||||||||||| || | || | || ||||| |
|
|
| T |
22391391 |
aaagtcaatatgccaaatctaaaagttgtatcatttgtcaacctaccaagcctctatcagacccaagaaattcattttcaggctgtacaaaattgttttg |
22391490 |
T |
 |
| Q |
119 |
tacaaagttgtcaagaactctctctgacttca |
150 |
Q |
| |
|
|||||| |||| || |||||||||| |||||| |
|
|
| T |
22391491 |
tacaaaattgtaaaaaactctctctaacttca |
22391522 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 22391757 - 22391812
Alignment:
| Q |
297 |
acatttctgtcaatatctaataaattataccgtttggttaaaggatataaacaatt |
352 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22391757 |
acatttctctcaagatctaataaattatattctttggttaaaggatataaacaatt |
22391812 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 545
Target Start/End: Original strand, 22391978 - 22392020
Alignment:
| Q |
503 |
atttaccgttgaaagtggacatttagttttattactatgctta |
545 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22391978 |
atttacagttgaaagtggacattttgttttattactatgctta |
22392020 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 17600 - 17725
Alignment:
| Q |
28 |
attccaaatctgaaatttgtagcatttgttaacctaccaagcctcagccagacccaaggaattcattttcaagcagcaccatatcgttttatacaaagtt |
127 |
Q |
| |
|
||||||||||| |||||||||| ||||| || |||||||| ||||| || |||| |||||||| |||||||| | | ||| ||||| ||||| | || |
|
|
| T |
17600 |
attccaaatctaaaatttgtagtatttgaaaatctaccaagactcagtcatgcccagggaattcaatttcaagctgtaaaataccgtttcatacagaatt |
17699 |
T |
 |
| Q |
128 |
gtcaagaactctctctgacttcagca |
153 |
Q |
| |
|
||||| |||| |||||| |||||||| |
|
|
| T |
17700 |
gtcaaaaactatctctggcttcagca |
17725 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0978 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0978
Description:
Target: scaffold0978; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 3593 - 3643
Alignment:
| Q |
495 |
aaatgattatttaccgttgaaagtggacatttagttttattactatgctta |
545 |
Q |
| |
|
||||||| |||||| |||||||||| | ||||||||||||||||||||||| |
|
|
| T |
3593 |
aaatgatgatttacagttgaaagtgaatatttagttttattactatgctta |
3643 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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