View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5555-Insertion-1 (Length: 194)

Name: NF5555-Insertion-1
Description: NF5555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5555-Insertion-1
NF5555-Insertion-1
[»] chr5 (47 HSPs)
chr5 (21-194)||(18183346-18183519)
chr5 (24-194)||(2865132-2865302)
chr5 (26-194)||(8647438-8647606)
chr5 (26-194)||(5819306-5819474)
chr5 (26-194)||(19359136-19359304)
chr5 (21-193)||(15372251-15372423)
chr5 (22-194)||(15708967-15709138)
chr5 (24-188)||(24362219-24362383)
chr5 (25-193)||(29455120-29455288)
chr5 (24-194)||(8460928-8461098)
chr5 (23-194)||(14215620-14215791)
chr5 (21-186)||(8647822-8647988)
chr5 (21-194)||(164568-164741)
chr5 (24-186)||(5818927-5819090)
chr5 (24-186)||(18182968-18183131)
chr5 (24-186)||(19359520-19359683)
chr5 (24-191)||(14463901-14464067)
chr5 (25-186)||(8461315-8461477)
chr5 (28-186)||(2864756-2864915)
chr5 (26-185)||(164191-164350)
chr5 (22-186)||(24331555-24331722)
chr5 (28-186)||(14215243-14215402)
chr5 (32-186)||(24361843-24361997)
chr5 (25-188)||(25000471-25000635)
chr5 (32-186)||(24325218-24325372)
chr5 (25-186)||(29454739-29454901)
chr5 (25-194)||(16018588-16018755)
chr5 (28-191)||(24331940-24332107)
chr5 (24-188)||(16018969-16019134)
chr5 (26-168)||(7349420-7349562)
chr5 (48-193)||(25000112-25000257)
chr5 (21-186)||(15709353-15709518)
chr5 (28-151)||(15371873-15371995)
chr5 (27-152)||(4222142-4222266)
chr5 (26-166)||(4623148-4623286)
chr5 (26-152)||(7348559-7348685)
chr5 (32-164)||(6019177-6019309)
chr5 (26-164)||(4219663-4219800)
chr5 (27-143)||(6018315-6018430)
chr5 (39-165)||(4624631-4624757)
chr5 (77-168)||(13814131-13814226)
chr5 (25-188)||(41834443-41834606)
chr5 (108-152)||(14462686-14462730)
chr5 (24-77)||(15029804-15029857)
chr5 (24-101)||(22651782-22651859)
chr5 (23-79)||(15115585-15115641)
chr5 (125-193)||(28495220-28495288)
[»] scaffold0295 (2 HSPs)
scaffold0295 (23-194)||(4790-4961)
scaffold0295 (28-140)||(5222-5334)
[»] chr3 (68 HSPs)
chr3 (26-194)||(39555954-39556122)
chr3 (24-194)||(31779029-31779199)
chr3 (23-194)||(20840557-20840728)
chr3 (24-194)||(5136978-5137148)
chr3 (25-194)||(23644461-23644630)
chr3 (21-194)||(24300933-24301106)
chr3 (29-194)||(41046703-41046868)
chr3 (25-194)||(37726928-37727097)
chr3 (26-194)||(43973441-43973609)
chr3 (23-181)||(48452986-48453144)
chr3 (25-194)||(27393954-27394123)
chr3 (21-191)||(32535339-32535513)
chr3 (28-194)||(25853604-25853770)
chr3 (21-194)||(30104477-30104649)
chr3 (21-186)||(43973824-43973990)
chr3 (21-186)||(37727314-37727480)
chr3 (21-194)||(26837733-26837905)
chr3 (30-194)||(22425190-22425354)
chr3 (25-186)||(20840945-20841107)
chr3 (25-186)||(39555577-39555739)
chr3 (26-186)||(25853234-25853395)
chr3 (24-186)||(4275748-4275911)
chr3 (22-188)||(29801798-29801965)
chr3 (25-186)||(31778652-31778814)
chr3 (23-186)||(17464488-17464652)
chr3 (22-194)||(26274944-26275115)
chr3 (25-191)||(17464871-17465038)
chr3 (25-186)||(27393660-27393822)
chr3 (23-186)||(5137365-5137529)
chr3 (21-186)||(22424809-22424975)
chr3 (25-186)||(30098147-30098309)
chr3 (29-152)||(32534962-32535085)
chr3 (21-186)||(23644849-23645015)
chr3 (29-167)||(25612381-25612519)
chr3 (24-186)||(26837358-26837521)
chr3 (26-165)||(23228414-23228552)
chr3 (29-186)||(26274570-26274728)
chr3 (26-143)||(29801356-29801473)
chr3 (29-186)||(24300560-24300717)
chr3 (26-168)||(50116812-50116954)
chr3 (27-166)||(32697106-32697244)
chr3 (21-167)||(51474737-51474884)
chr3 (29-186)||(41047083-41047239)
chr3 (24-167)||(37220555-37220698)
chr3 (27-140)||(51473429-51473542)
chr3 (24-164)||(45965936-45966076)
chr3 (28-170)||(25420542-25420684)
chr3 (24-112)||(37222030-37222118)
chr3 (21-122)||(25419139-25419241)
chr3 (45-154)||(18010162-18010271)
chr3 (25-168)||(23227261-23227398)
chr3 (22-194)||(49407792-49407963)
chr3 (23-194)||(27200070-27200240)
chr3 (29-140)||(32695706-32695817)
chr3 (22-194)||(50900906-50901077)
chr3 (23-79)||(52375824-52375880)
chr3 (131-194)||(55192222-55192285)
chr3 (16-194)||(37075676-37075856)
chr3 (29-101)||(22370599-22370671)
chr3 (145-193)||(29801535-29801583)
chr3 (25-186)||(51827956-51828117)
chr3 (25-79)||(330329-330383)
chr3 (21-79)||(55390090-55390148)
chr3 (26-79)||(40275093-40275146)
chr3 (23-79)||(2051292-2051348)
chr3 (25-57)||(25611497-25611529)
chr3 (25-77)||(49720856-49720908)
chr3 (23-79)||(52237310-52237366)
[»] chr1 (46 HSPs)
chr1 (25-194)||(50970655-50970824)
chr1 (25-194)||(5540195-5540364)
chr1 (24-191)||(18984117-18984284)
chr1 (25-194)||(15646572-15646741)
chr1 (26-194)||(29306953-29307121)
chr1 (28-194)||(33144296-33144462)
chr1 (25-194)||(29869619-29869788)
chr1 (29-194)||(15173099-15173264)
chr1 (26-194)||(8678919-8679086)
chr1 (29-194)||(5962955-5963120)
chr1 (22-194)||(9018969-9019141)
chr1 (26-194)||(21856420-21856588)
chr1 (24-193)||(26859438-26859606)
chr1 (26-194)||(29307318-29307487)
chr1 (26-191)||(17433216-17433381)
chr1 (22-190)||(9019343-9019512)
chr1 (28-188)||(17433597-17433758)
chr1 (28-189)||(39154021-39154182)
chr1 (24-184)||(50970276-50970437)
chr1 (21-186)||(29870003-29870169)
chr1 (19-152)||(18984538-18984671)
chr1 (22-186)||(21856038-21856203)
chr1 (27-186)||(5539817-5539977)
chr1 (27-186)||(8678542-8678702)
chr1 (27-185)||(4636356-4636515)
chr1 (24-186)||(15173478-15173640)
chr1 (21-186)||(26859054-26859220)
chr1 (25-186)||(39154404-39154566)
chr1 (34-186)||(33143925-33144078)
chr1 (24-186)||(15646190-15646353)
chr1 (25-166)||(52268289-52268430)
chr1 (27-186)||(5962579-5962739)
chr1 (86-194)||(4636033-4636140)
chr1 (21-112)||(2733416-2733507)
chr1 (28-142)||(52269177-52269291)
chr1 (26-186)||(17112282-17112442)
chr1 (28-101)||(47826966-47827039)
chr1 (34-122)||(47827037-47827125)
chr1 (15-188)||(44802555-44802728)
chr1 (26-107)||(50419725-50419806)
chr1 (23-194)||(17088518-17088688)
chr1 (24-87)||(52235153-52235216)
chr1 (25-79)||(29438929-29438983)
chr1 (125-194)||(45048253-45048322)
chr1 (28-77)||(50304441-50304490)
chr1 (29-77)||(17641864-17641912)
[»] chr8 (37 HSPs)
chr8 (22-193)||(19176668-19176839)
chr8 (24-194)||(41681132-41681301)
chr8 (22-194)||(12571859-12572032)
chr8 (21-194)||(11656450-11656624)
chr8 (25-194)||(9930034-9930203)
chr8 (24-193)||(31133218-31133387)
chr8 (23-194)||(44831622-44831793)
chr8 (29-194)||(33328161-33328326)
chr8 (30-194)||(13224645-13224808)
chr8 (25-186)||(13225023-13225185)
chr8 (21-193)||(9178014-9178185)
chr8 (23-186)||(19176287-19176451)
chr8 (25-186)||(11656841-11657003)
chr8 (25-186)||(44831246-44831408)
chr8 (21-152)||(34540967-34541098)
chr8 (29-186)||(9928912-9929070)
chr8 (26-175)||(41681529-41681679)
chr8 (22-186)||(33742918-33743082)
chr8 (27-185)||(31133605-31133764)
chr8 (29-186)||(12572235-12572393)
chr8 (28-186)||(33328524-33328683)
chr8 (73-192)||(33743298-33743417)
chr8 (29-194)||(4630169-4630328)
chr8 (24-134)||(11336959-11337069)
chr8 (24-180)||(4629795-4629952)
chr8 (21-164)||(10918121-10918264)
chr8 (25-167)||(8073956-8074097)
chr8 (105-167)||(43958264-43958326)
chr8 (24-59)||(9177665-9177700)
chr8 (23-101)||(35427283-35427361)
chr8 (25-66)||(10919691-10919732)
chr8 (23-79)||(15255850-15255906)
chr8 (21-79)||(6115604-6115662)
chr8 (118-186)||(9177724-9177793)
chr8 (22-71)||(43958205-43958254)
chr8 (12-48)||(14055145-14055181)
chr8 (27-79)||(28254919-28254971)
[»] chr7 (37 HSPs)
chr7 (24-194)||(19830418-19830588)
chr7 (25-194)||(37786766-37786935)
chr7 (26-194)||(19590525-19590693)
chr7 (24-194)||(35289278-35289448)
chr7 (29-194)||(29100228-29100393)
chr7 (25-194)||(38858642-38858811)
chr7 (24-193)||(34534169-34534338)
chr7 (26-194)||(32004991-32005159)
chr7 (23-194)||(2659217-2659388)
chr7 (21-186)||(19590909-19591075)
chr7 (32-194)||(23953106-23953268)
chr7 (24-194)||(4478077-4478247)
chr7 (21-186)||(38859025-38859191)
chr7 (29-190)||(4641443-4641604)
chr7 (16-184)||(37787153-37787322)
chr7 (24-186)||(2658837-2659000)
chr7 (24-185)||(32004612-32004774)
chr7 (24-186)||(34533789-34533952)
chr7 (26-185)||(35288903-35289063)
chr7 (25-186)||(19830804-19830965)
chr7 (22-168)||(38160947-38161093)
chr7 (23-186)||(23952727-23952892)
chr7 (39-152)||(29099863-29099976)
chr7 (29-186)||(4641828-4641983)
chr7 (24-164)||(28583437-28583577)
chr7 (27-167)||(28584326-28584466)
chr7 (25-90)||(39137014-39137080)
chr7 (125-194)||(35579264-35579333)
chr7 (25-81)||(34595263-34595319)
chr7 (25-101)||(49064033-49064109)
chr7 (24-79)||(787279-787334)
chr7 (16-79)||(27245194-27245256)
chr7 (131-194)||(32427398-32427461)
chr7 (26-79)||(26048439-26048492)
chr7 (22-79)||(48247583-48247640)
chr7 (16-186)||(7732478-7732648)
chr7 (21-77)||(16917708-16917764)
[»] chr6 (37 HSPs)
chr6 (24-194)||(18257135-18257305)
chr6 (24-194)||(20741098-20741268)
chr6 (21-194)||(10900307-10900480)
chr6 (25-194)||(15828018-15828187)
chr6 (26-194)||(11276959-11277127)
chr6 (22-194)||(28472633-28472804)
chr6 (22-194)||(29859822-29859993)
chr6 (22-194)||(31470693-31470865)
chr6 (23-186)||(2319669-2319832)
chr6 (24-194)||(12935534-12935704)
chr6 (21-194)||(11444982-11445155)
chr6 (23-186)||(12935154-12935318)
chr6 (29-194)||(10899942-10900108)
chr6 (26-194)||(1149808-1149977)
chr6 (22-186)||(11445371-11445536)
chr6 (22-186)||(22219737-22219902)
chr6 (24-186)||(23075512-23075675)
chr6 (25-193)||(23073998-23074155)
chr6 (27-185)||(18505305-18505463)
chr6 (29-190)||(2322600-2322760)
chr6 (26-189)||(4811372-4811535)
chr6 (29-152)||(18504922-18505045)
chr6 (25-186)||(20741485-20741650)
chr6 (25-186)||(31470314-31470476)
chr6 (26-145)||(18257563-18257682)
chr6 (25-194)||(11276589-11276759)
chr6 (28-168)||(29033436-29033577)
chr6 (27-152)||(15827639-15827766)
chr6 (16-167)||(18296135-18296285)
chr6 (24-114)||(1149463-1149553)
chr6 (26-152)||(4811675-4811801)
chr6 (29-162)||(3835135-3835268)
chr6 (28-168)||(29035040-29035180)
chr6 (26-82)||(22534214-22534270)
chr6 (25-194)||(35163564-35163734)
chr6 (21-194)||(32836375-32836547)
chr6 (7-71)||(5120970-5121034)
[»] chr2 (52 HSPs)
chr2 (24-194)||(11090519-11090689)
chr2 (21-194)||(40815722-40815895)
chr2 (23-191)||(239350-239517)
chr2 (24-191)||(22374318-22374485)
chr2 (25-191)||(26538096-26538262)
chr2 (21-194)||(18451208-18451381)
chr2 (25-194)||(40027139-40027308)
chr2 (24-194)||(1978106-1978276)
chr2 (21-194)||(28616608-28616782)
chr2 (21-194)||(26538455-26538629)
chr2 (26-194)||(43058333-43058501)
chr2 (29-194)||(14432145-14432310)
chr2 (23-194)||(3025463-3025633)
chr2 (21-186)||(7446730-7446896)
chr2 (29-194)||(8425737-8425902)
chr2 (25-186)||(18450829-18450991)
chr2 (25-167)||(20444748-20444890)
chr2 (24-186)||(22374709-22374872)
chr2 (28-186)||(40815347-40815506)
chr2 (25-186)||(28616998-28617160)
chr2 (25-182)||(7446341-7446497)
chr2 (22-186)||(43058717-43058881)
chr2 (16-167)||(20440436-20440586)
chr2 (29-186)||(40027524-40027682)
chr2 (24-186)||(11090904-11091067)
chr2 (27-186)||(239736-239896)
chr2 (24-152)||(1978528-1978656)
chr2 (27-167)||(35781067-35781207)
chr2 (26-167)||(35779708-35779849)
chr2 (24-144)||(28847122-28847242)
chr2 (21-185)||(3025848-3026011)
chr2 (20-186)||(14432525-14432692)
chr2 (29-185)||(8425358-8425514)
chr2 (28-167)||(8972239-8972378)
chr2 (28-168)||(15551501-15551641)
chr2 (28-166)||(15552459-15552596)
chr2 (23-194)||(28143408-28143578)
chr2 (25-184)||(31797166-31797324)
chr2 (24-191)||(14942225-14942394)
chr2 (21-79)||(38007945-38008003)
chr2 (25-79)||(42192736-42192790)
chr2 (21-101)||(62952-63032)
chr2 (23-79)||(25336093-25336149)
chr2 (29-100)||(3822924-3822995)
chr2 (26-77)||(4355755-4355806)
chr2 (16-79)||(43216202-43216265)
chr2 (21-79)||(20128230-20128288)
chr2 (21-79)||(42192235-42192293)
chr2 (26-79)||(6949937-6949990)
chr2 (22-79)||(33921105-33921162)
chr2 (23-79)||(24140167-24140223)
chr2 (25-77)||(44220140-44220192)
[»] scaffold0951 (2 HSPs)
scaffold0951 (24-194)||(1665-1835)
scaffold0951 (23-186)||(2051-2215)
[»] chr4 (68 HSPs)
chr4 (24-194)||(25447613-25447783)
chr4 (21-194)||(11153524-11153697)
chr4 (23-194)||(12234326-12234497)
chr4 (15-194)||(25937659-25937838)
chr4 (28-194)||(33109686-33109852)
chr4 (28-194)||(46193782-46193948)
chr4 (28-194)||(38962196-38962362)
chr4 (25-194)||(15523611-15523780)
chr4 (28-193)||(23494445-23494610)
chr4 (22-194)||(22434555-22434725)
chr4 (28-191)||(4219559-4219722)
chr4 (25-194)||(48526195-48526363)
chr4 (21-194)||(51020792-51020965)
chr4 (26-188)||(46193405-46193568)
chr4 (21-186)||(22434174-22434340)
chr4 (29-194)||(2118673-2118837)
chr4 (25-194)||(22170314-22170482)
chr4 (26-186)||(25447247-25447408)
chr4 (21-186)||(4219943-4220109)
chr4 (24-185)||(15523233-15523395)
chr4 (26-186)||(45082808-45082969)
chr4 (24-193)||(54995446-54995614)
chr4 (23-142)||(23494872-23494991)
chr4 (23-186)||(20470895-20471059)
chr4 (23-194)||(45082429-45082598)
chr4 (26-186)||(12234713-12234874)
chr4 (24-186)||(54995067-54995230)
chr4 (29-186)||(48526565-48526723)
chr4 (24-152)||(33109883-33110011)
chr4 (24-175)||(51021191-51021342)
chr4 (25-152)||(25938090-25938217)
chr4 (25-186)||(11153145-11153307)
chr4 (28-186)||(2118295-2118454)
chr4 (29-186)||(18751602-18751760)
chr4 (22-168)||(20958264-20958408)
chr4 (23-140)||(18763951-18764068)
chr4 (43-186)||(12503453-12503597)
chr4 (27-167)||(44892552-44892692)
chr4 (44-167)||(43243685-43243807)
chr4 (24-167)||(48293592-48293735)
chr4 (94-194)||(12503813-12503913)
chr4 (24-168)||(48713749-48713893)
chr4 (26-143)||(35363028-35363146)
chr4 (24-162)||(48708293-48708431)
chr4 (29-162)||(16690939-16691072)
chr4 (44-164)||(43281198-43281317)
chr4 (26-167)||(48294946-48295088)
chr4 (26-162)||(16691481-16691616)
chr4 (27-167)||(44890518-44890658)
chr4 (25-152)||(10258306-10258433)
chr4 (33-164)||(20957196-20957327)
chr4 (25-96)||(16318251-16318322)
chr4 (84-167)||(43242328-43242411)
chr4 (135-194)||(18751979-18752038)
chr4 (25-194)||(17503973-17504141)
chr4 (87-167)||(44220781-44220861)
chr4 (26-122)||(55189528-55189624)
chr4 (26-167)||(30597925-30598065)
chr4 (25-79)||(55677451-55677505)
chr4 (21-77)||(12593518-12593574)
chr4 (28-79)||(44219377-44219428)
chr4 (16-79)||(45838537-45838600)
chr4 (24-79)||(46737148-46737203)
chr4 (22-79)||(33689825-33689882)
chr4 (125-194)||(35193406-35193475)
chr4 (162-194)||(17504337-17504369)
chr4 (23-79)||(34789876-34789932)
chr4 (23-79)||(41608908-41608964)
[»] scaffold1223 (2 HSPs)
scaffold1223 (28-194)||(755-920)
scaffold1223 (16-194)||(1117-1296)
[»] scaffold0273 (2 HSPs)
scaffold0273 (24-194)||(4584-4754)
scaffold0273 (65-186)||(4242-4364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (22-194)||(134050-134222)
[»] scaffold0007 (4 HSPs)
scaffold0007 (25-194)||(64301-64470)
scaffold0007 (29-186)||(64689-64847)
scaffold0007 (28-194)||(205746-205911)
scaffold0007 (25-122)||(210787-210884)
[»] scaffold0027 (2 HSPs)
scaffold0027 (22-194)||(42536-42707)
scaffold0027 (29-194)||(42172-42338)
[»] scaffold0176 (2 HSPs)
scaffold0176 (25-193)||(18834-19001)
scaffold0176 (21-122)||(19070-19171)
[»] scaffold0432 (2 HSPs)
scaffold0432 (29-194)||(10250-10414)
scaffold0432 (29-152)||(9935-10057)
[»] scaffold0417 (2 HSPs)
scaffold0417 (45-194)||(10640-10789)
scaffold0417 (26-186)||(11007-11168)
[»] scaffold1585 (1 HSPs)
scaffold1585 (27-168)||(568-709)
[»] scaffold0113 (1 HSPs)
scaffold0113 (25-152)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (43-186)||(16880-17024)
scaffold0157 (94-194)||(16564-16664)
[»] scaffold0057 (2 HSPs)
scaffold0057 (29-167)||(61862-62000)
scaffold0057 (24-100)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (30-167)||(454-589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (29-129)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (75-168)||(7691-7784)
[»] scaffold0097 (1 HSPs)
scaffold0097 (21-79)||(46761-46819)
[»] scaffold1339 (1 HSPs)
scaffold1339 (23-51)||(30-58)
[»] scaffold0830 (1 HSPs)
scaffold0830 (23-51)||(5352-5380)


Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 18183519 - 18183346
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183519 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 18183420  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183419 tttgttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 18183346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 2865302 - 2865132
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||| |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 2865132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 6e-79
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 8647438 - 8647606
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 5819474 - 5819306
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccc 5819306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 19359136 - 19359304
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccc 19359304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 15372423 - 15372251
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15372423 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatt 15372324  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    || ||||||||||| || |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15372323 tttgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacc 15372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 15708967 - 15709138
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  15708967 tttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcattt 15709066  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15709067 ttgttgcatatttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15709138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 24362383 - 24362219
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||     
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 188  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 24362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 29455288 - 29455120
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  29455188 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacc 29455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 8460928 - 8461098
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8461098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 14215791 - 14215620
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     ||||||||||||||| || | |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 14215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 8647988 - 8647822
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8647988 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 8647889  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||| ||||| | ||||| |  ||||| |||||||||||||| ||||||||||    
T  8647888 tttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 164741 - 164568
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||| | ||||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  164741 ttttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatt 164642  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || ||||||||||| |||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  164641 tttgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccc 164568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 5818927 - 5819090
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 18182968 - 18183131
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  124 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||||| | |||||| | ||| |||||||||||||| ||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 19359683 - 19359520
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||| |||||||||||||||||| ||||| |  ||||| ||||| ||||||||  |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |  || |||||||||| ||||||||||| ||||||||||||||||||     
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
     ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 8461477 - 8461315
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     ||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  128 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 24331555 - 24331722
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc--at 119  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatt 24331654  T
Q  120 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||| |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24331655 ttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  128 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  32 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 131  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  132 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 25000635 - 25000471
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| |||| ||||||||||||||| |    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 188  Q
    ||||||||||||||| |||||| ||||| |  |||||||||||||||||||| ||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  32 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 131  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| || |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  132 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 29454739 - 29454901
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 16018588 - 16018755
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||| |||||||||||||||||||||||| |||||      
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||| ||||||||| ||||||||||||||||||||   ||| |||| ||||||||||||||||||    
T  16018687 ttgcattttccgtcctacc-cccattttattctccaaaaatatagaaaaatgacagttttagacctaccc 16018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 191
Target Start/End: Complemental strand, 24332107 - 24331940
Alignment:
Q  28 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttc-g 124  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||  |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  125 ttgcattttt-cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagaccta 24331940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 16019134 - 16018969
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||| |||| ||| ||||||||||||||||     
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  124 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttagac 188  Q
    |||| |||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 168
Target Start/End: Complemental strand, 7349562 - 7349420
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| |||||||||| ||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    |||| ||||| ||||||| |||||||| | |||||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 25000112 - 25000257
Alignment:
Q  48 tcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctccc 147  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||| |||| ||||||| ||||||||||||  |||||||||| |||||||| |||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  148 attttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacc 25000257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 15709518 - 15709353
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||| | ||||||||    
T  15709518 tttttggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatt 15709420  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |  ||||||||||||||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||    
T  15709419 tctgttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 15371873 - 15371995
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  128 catttttcgtcctacctcccattt 151  Q
    |||||||||||| |||||| ||||    
T  15371972 catttttcgtcccacctcctattt 15371995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 4222266 - 4222142
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||  ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  127 gcatttttcgtcctacctcccatttt 152  Q
    ||||||||||||||||| ||||||||    
T  4222166 gcatttttcgtcctacc-cccatttt 4222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 4623148 - 4623286
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||||||||  |||||||||||||||||||  |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacg 166  Q
     ||||||| ||||||||  |||||||||| |||||||||||    
T  4623248 ggcattttccgtcctac--cccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  ||||||  |||||||||| ||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  126 tgcatttttcgtcctacctcccatttt 152  Q
    |||| ||||||||||||| ||||||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 164
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  32 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcat- 130  Q
    |||||| |||||||| || ||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||||| |||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  131 ttttcgtcctacctcccattttattctccaaaaa 164  Q
    |||||||||||||||||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   |||||| | |||||||||| ||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaa 164  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  4219763 tgcatttttcgtcctacc-cccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 6018315 - 6018430
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||||| || ||||||||||||||||||||   | |||||||||||||||| |||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  127 gcatttttcgtcctacc 143  Q
    ||| |||| ||||||||    
T  6018414 gcagttttagtcctacc 6018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 165
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  39 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 138  Q
    |||| |||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  || ||||||||||||||  |||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  139 ctacctcccattttattctccaaaaac 165  Q
    ||||| |||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 168
Target Start/End: Complemental strand, 13814226 - 13814131
Alignment:
Q  77 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    |||||||||||||| ||||||||||| ||| |     |||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctacc-cccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 41834606 - 41834443
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttc 123  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| |||| | || |||||| |||     
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtttt 41834508  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 188  Q
     ||||| |||| ||||||||||| |||||   |||   |||||||||||||| ||||||||||||    
T  41834507 tttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  108 ttcaattatcattttcgttgcatttttcgtcctacctcccatttt 152  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 15029857 - 15029804
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| |||||    
T  15029857 taggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtc 15029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 22651859 - 22651782
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 101  Q
    ||||||||||||||||||| |||||||  ||||| ||  ||||||||| |||| ||||| |||| |||  ||||||||    
T  22651859 taggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaa 22651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 15115641 - 15115585
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||| |||||   ||||| || |||||||||| |||||||    
T  15115641 ttaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcct 15115585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 28495288 - 28495220
Alignment:
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    ||||| |||| ||||||||||| |||||   ||||| || ||||||||||| | |||||||||||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaactccagaaccgcagagaaatgatagttttagacctacc 28495220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 160; Significance: 2e-85; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 4790 - 4961
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4890 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 4961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  128 catttttcgtcct 140  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 39556122 - 39555954
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 39555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 31779199 - 31779029
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccc 31779029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 20840557 - 20840728
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttt 20840656  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     |||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  20840657 tgttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccc 20840728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 5136978 - 5137148
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5137148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 9e-75
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 23644461 - 23644630
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23644561 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccc 23644630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 9e-75
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 24301106 - 24300933
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| | |||||||    
T  24301106 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatt 24301007  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24301006 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 24300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 9e-75
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 41046703 - 41046868
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 41046868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 37726928 - 37727097
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37727097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 43973441 - 43973609
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctaccc 43973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagt 181  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  48453086 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 27394123 - 27393954
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  27394023 ttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccc 27393954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 32535513 - 32535339
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32535513 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 32535414  T
Q  121 -----ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
         || |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  32535413 aaatttttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgatagttttagaccta 32535339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 3e-68
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 25853770 - 25853604
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||| ||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 25853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 30104477 - 30104649
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  30104477 ttttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatt 30104576  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  30104577 tttgttgcatttttcgtcctacc-cccattttattatctaaaaacgcagagaaatgacagttttagacctaccc 30104649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 127; E-Value: 8e-66
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 43973990 - 43973824
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  43973990 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatt 43973891  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  43973890 tttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 37727480 - 37727314
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37727480 tttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatt 37727381  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  37727380 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 26837905 - 26837733
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||| |||||||    
T  26837905 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatt 26837807  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || ||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  26837806 tttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccc 26837733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 22425354 - 22425190
Alignment:
Q  30 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 129  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  130 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccc 22425190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 20841107 - 20840945
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 39555577 - 39555739
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||| |||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||| |||||||| ||||| |  ||||| |||||||||||||||||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 4275911 - 4275748
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||     
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 29801965 - 29801798
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29801965 tttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 29801866  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 188  Q
    | |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||||    
T  29801865 ttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 31778652 - 31778814
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 17464488 - 17464652
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  123 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     ||||||||||||||||||||||| ||||| |  ||||| ||||| | |||||| ||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 26275115 - 26274944
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||| ||||||| | |||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  26275115 tttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcattt 26275016  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  26275015 ttgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccc 26274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 17465038 - 17464871
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  125 ttgcat-ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    |||||| |||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||    
T  17464938 ttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagaccta 17464871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 27393660 - 27393822
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||| || ||||| |  | ||| |||||||||||||| ||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 5137529 - 5137365
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  123 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     ||||||||||| |||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 107; E-Value: 7e-54
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 22424809 - 22424975
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  22424809 ttttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatt 22424908  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| ||||||||||    
T  22424909 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 107; E-Value: 7e-54
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 30098309 - 30098147
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  || || ||||||||||| || ||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 32534962 - 32535085
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  129 atttttcgtcctacctcccatttt 152  Q
    |||||||||||||||||| |||||    
T  32535062 atttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 23645015 - 23644849
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  23645015 ttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatt 23644916  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || |||||||||||| |||||||||| ||||| |  ||| |  ||||||||||||| ||||||||||    
T  23644915 tttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 25612519 - 25612381
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| || |||||||||||| |||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 26837358 - 26837521
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||     
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  |||||||||||||||||||  |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaac 165  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||| ||||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||| ||||||| ||||| |  ||||| ||||||||  |||| ||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  126 tgcatttttcgtcctacc 143  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | ||||||||| |||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 26 - 168
Target Start/End: Complemental strand, 50116954 - 50116812
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||||||||| ||| |||||||||||||| |||| |||||||||| ||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    |||| ||||||||||||| |||||||| | |||||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 32697244 - 32697106
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| | |||  ||||||||||||||||||||||  || |||||||||||||||| |||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  127 gcatttttcgtcctacctcccattttattctccaaaaacg 166  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  32697144 gcatttttcgtcctacc-cccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 51474884 - 51474737
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  |||||| | ||||||||    
T  51474884 ttttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatt 51474785  T
Q  121 ttcgttgcatttttcgtcctacctccca-ttttattctccaaaaacgc 167  Q
    || |||||||||||||||||||| || | |||||| ||||||||||||    
T  51474784 tttgttgcatttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||| | || || |||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||||| |||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 37220555 - 37220698
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |  | || ||| |||||||||||||| ||||  |||||||| ||||||||||     
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    |||||| |||||||||||||  ||||||||| ||||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||  |||||||  |||||||||| |||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  127 gcatttttcgtcct 140  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 45965936 - 45966076
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  |  |||||| ||||||||||| |||||||  ||||||| ||||||||||      
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaa 164  Q
    |||||||||||||| ||| | |||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 25420684 - 25420542
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||| || |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||||||||||||| ||||| ||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcaga 170  Q
    ||||||||||| |||| |||||||||| || |||||| |||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 8e-29
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 37222118 - 37222030
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 112  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||  ||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 25419139 - 25419241
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatcat 119  Q
    ||||| |||| |||| |||||||||| ||||||||| || ||||||||||| | || ||||||||||||||||||||||||| |||| ||||||||||||    
T  25419139 ttttaagcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcat 25419238  T
Q  120 ttt 122  Q
    |||    
T  25419239 ttt 25419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  45 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 144  Q
    ||||| |||||| | |||||||||||| |||| | ||||||||||||||||||||||  ||  ||||||||||||||| ||||||||||||||||| ||     
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  145 cccattttat 154  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 23227261 - 23227398
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||| ||||| ||||||||||   |||||||||| ||||||||||| |||||||       | ||||||||||||   ||||| ||||| ||||||| |    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    |||||||||||||||| |  |||||||||| |||||||||||||    
T  23227355 ttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 49407792 - 49407963
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | | || |    
T  49407792 tttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact-ttatgt 49407890  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |   | || |||| ||| ||||||| |||||   |||||||||||||||||||| ||| ||||||||||||||    
T  49407891 tttgtacagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccc 49407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 27200240 - 27200070
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||||| |  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || |||||  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
      ||||| |||| ||| ||||||| |||||   ||||| |||||||||||||| |||| |||||||||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccc 27200070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||| ||||||||||| | |||||||||||| |||||| || |  || | ||||||||||||||||||  ||||| | ||||| ||||| |||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  129 atttttcgtcct 140  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 50901077 - 50900906
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||||||||||  ||||| ||  ||||| ||| ||| ||||||  ||  |||  ||||||||| |||| | || ||| || |    
T  50901077 tttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgt 50900979  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |  ||||| |||| ||||||||||| |||||   ||||| ||||||| ||||||  |||||||||| ||||||    
T  50900978 tttttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccc 50900906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 52375880 - 52375824
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 55192222 - 55192285
Alignment:
Q  131 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||| ||||||||||| |||||   ||||| |||||||||||||| ||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccc 55192285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 37075676 - 37075856
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaa-- 112  Q
    |||| ||||| ||||||||||||||||||||  ||  ||||| || |||||||||| |||||||||| |||| ||| || |||||| | |||| | ||      
T  37075676 attttttttatgcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatca-aacaaacccgtccctaaact 37075774  T
Q  113 ttatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     |||  ||||  ||||| |||| ||||||||||  |||||   ||||| |||||||||||||| || |||||||||||||||    
T  37075775 atatgtttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccc 37075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 22370599 - 22370671
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 101  Q
    ||||||||||||||||||||||  ||||| || |||||||||| ||||||| || |||| ||||  |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaa 22370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 29801535 - 29801583
Alignment:
Q  145 cccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    ||||||||||||| |||||| |||||||||| |||||||||||| ||||    
T  29801535 cccattttattcttcaaaaatgcagagaaatgacagttttagacatacc 29801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 51827956 - 51828117
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct-gcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | || ||| || ||     
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  124 gttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttag 186  Q
     |||||||||| |||||| ||||| |||||   ||||| ||||||| | |||| ||||||||||    
T  51828054 tttgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 330383 - 330329
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||| |||||||||||  ||||| || |||||||||| |||||||    
T  330383 aggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcct 330329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 55390148 - 55390090
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||||||  ||||  || | |||||||| |||||||    
T  55390148 ttttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcct 55390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 40275093 - 40275146
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 40275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 2051292 - 2051348
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  2051292 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 2051348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 25611497 - 25611529
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttg 57  Q
    ||||||||||||||||||| |||||||||||||    
T  25611497 aggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 49720908 - 49720856
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  49720908 aggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 49720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 52237366 - 52237310
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||| ||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  52237366 ttagccttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 52237310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 6e-82; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 6e-82
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 50970824 - 50970655
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 50970655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 5540364 - 5540195
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5540195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 2e-78
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 18984117 - 18984284
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagaccta 18984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 15646741 - 15646572
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15646572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 29306953 - 29307121
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29307121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 33144462 - 33144296
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33144296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 9e-75
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 29869619 - 29869788
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 15173099 - 15173264
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| |||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15173264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 8679086 - 8678919
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  8678986 tgcatttttcgtcctacct-ccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8678919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 5963120 - 5962955
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||| ||||||||||||||| |||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 9018969 - 9019141
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  9018969 tttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattt 9019068  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||    
T  9019069 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccc 9019141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 21856588 - 21856420
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 21856420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 26859606 - 26859438
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||     
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacc 26859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 29307487 - 29307318
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctaccc 29307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 17433216 - 17433381
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 17433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 9019512 - 9019343
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  9019512 tttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattt 9019413  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacct 190  Q
    | ||||||||||||||||||||||| ||||| |  | ||| |||||||||||||||||||||||||||||    
T  9019412 ttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacct 9019343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  128 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 188  Q
    ||||||||||||||||||| ||||| |  || || |||||||||||||| ||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 39154021 - 39154182
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacc 189  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||| |||||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacc 39154182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 50970276 - 50970437
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 184  Q
    ||||||||||||||||||||| | ||||| |  ||||| |||||||||||||| ||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 29870169 - 29870003
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29870169 tttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatt 29870070  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| |  ||  | |||||||||||||| ||||||||||    
T  29870069 tttgttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 18984671 - 18984538
Alignment:
Q  19 tcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 118  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18984671 tctttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 18984572  T
Q  119 ttttcgttgcatttttcgtcctacctcccatttt 152  Q
    |||| ||||||||||||||||||||||| |||||    
T  18984571 tttttgttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 21856038 - 21856203
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 21856137  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  21856138 ttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  127 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | |||||||||||||||||| ||||| |  ||||| ||||||| ||||||  |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 8678542 - 8678702
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  127 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||| | ||||| |  || || ||||||| |||||| ||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 27 - 185
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  127 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
    ||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 15173640 - 15173478
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||     
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 26859054 - 26859220
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26859054 tttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatt 26859153  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||  ||||| |  ||||| |||||||||||| ||| ||||||||    
T  26859154 tttgttgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttag 26859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 39154566 - 39154404
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  || || |||||||||||||| ||| ||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  34 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttt 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  134 tcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 15646190 - 15646353
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||     
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||||  ||||| |  ||||| ||| |||||||||| ||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 52268289 - 52268430
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||| |    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacg 166  Q
    ||||| ||||||||||||| |||||||| | |||||||||||    
T  52268389 ttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  127 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||| |||||||| ||||| |  ||||| |||| ||||| ||| ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 4636033 - 4636140
Alignment:
Q  86 ttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttta 185  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  186 gacctaccc 194  Q
    |||||||||    
T  4636132 gacctaccc 4636140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 2733507 - 2733416
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 112  Q
    ||||||||||||||| |||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2733507 ttttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  ||| |||| |||||||||| ||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  128 catttttcgtcctac 142  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  |||||||||||||||||||  |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||| ||||| |  ||||| ||||||||| |||| | ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 101  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 47827125 - 47827037
Alignment:
Q  34 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||| ||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttt 47827037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 44802728 - 44802555
Alignment:
Q  15 catttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 114  Q
    ||||| |||||||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||| | || |    
T  44802728 cattttttttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaact 44802629  T
Q  115 atcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 188  Q
    ||||| ||  ||||| |||| || |||||||| |||||   ||||| |||| |||| |||| ||| ||||||||    
T  44802628 atcatgttttttgcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 107  Q
    ||||||||| ||||||||||| |||  ||| | || |||||||||| |||||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 17088688 - 17088518
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||||||||   |||||  |  ||||||||| ||||| |||| |||| ||| || |||||||| |||| | || ||| || |    
T  17088688 ttaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatca-aacaaaaccgtccctaaactat-atat 17088591  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |  ||||| |||| || |||||||| |||||    || | |||||||||||||| ||||||||||||||||||    
T  17088590 tttttgcagttttagttctacctcctattttcaaatctagaaacgcagagaaatgacagttttagacctaccc 17088518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 52235216 - 52235153
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt 87  Q
    |||||||||||||||||||| |||||   ||||  || ||||||||||||| ||||||||||||    
T  52235216 taggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgccctttt 52235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 29438929 - 29438983
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  29438929 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 29438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 45048253 - 45048322
Alignment:
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||| |||| ||||||||||  |||||   ||||| ||||||| ||||||||||||||||||| |||||    
T  45048253 ttgcagttttagtcctacctcatattttcaactccagaaacgcatagaaataacagttttagacttaccc 45048322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 50304441 - 50304490
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 17641912 - 17641864
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 22 - 193
Target Start/End: Complemental strand, 19176839 - 19176668
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176839 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19176740  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  19176739 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctacc 19176668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 41681132 - 41681301
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  41681232 gttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttaaacataccc 41681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 9e-75
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 12571859 - 12572032
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  12571859 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcattt 12571958  T
Q  122 tcgttgcatttttcgtcct-acctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12571959 ttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 12572032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 11656450 - 11656624
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  11656450 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatt 11656549  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  11656550 tttgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccc 11656624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 9930203 - 9930034
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  9930103 ttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccc 9930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 31133218 - 31133387
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||     
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  31133318 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 31133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 44831793 - 44831622
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttt 44831694  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     ||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  44831693 tgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 44831622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 33328161 - 33328326
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 33328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 5e-67
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 13224645 - 13224808
Alignment:
Q  30 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 129  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  130 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 13224808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 13225185 - 13225023
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 9178185 - 9178014
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||    
T  9178185 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatt 9178086  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    || |||||||||||| || |||| |||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  9178085 tttgttgcatttttcatcttacc-cccattttattctcaaaaaacgcagagaaatgacaattttagacctacc 9178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 19176287 - 19176451
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  123 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 11657003 - 11656841
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| |    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 44831246 - 44831408
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 34541098 - 34540967
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  34541098 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatt 34540999  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt 152  Q
    || ||||||||||||||||||||||| |||||    
T  34540998 tttgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||  |||| |  ||||| ||||||||||||||  |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 41681679 - 41681529
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 175  Q
    ||||||||||||||||||| | ||||| |  ||||| ||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaat 41681529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 33742918 - 33743082
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcattt 33743016  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | | ||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  33743017 ttgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 27 - 185
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  127 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
    |||||||||||| ||||||| ||||| |  ||||| ||| |||||||||| || ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 107; E-Value: 7e-54
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  128 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||| |||||||||||| |  ||||| ||||||||||||||  |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 33743417 - 33743298
Alignment:
Q  73 tggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagaga 172  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  173 aataacagttttagacctac 192  Q
    ||||||||||||||||||||    
T  33743317 aataacagttttagacctac 33743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 4630328 - 4630169
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||||||  ||||||||||||| | ||||||||||||||||      | |||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccc 4630169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||     
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  124 gttgcattttt 134  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||| |||||||  | ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||     
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacag 180  Q
     |||||||||||||| ||||||| ||||| |  ||||| ||||||| |||||| ||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 10918121 - 10918264
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||| ||||||||| |||| ||||||||||||||  |||||||||||| ||||| ||||   |||||||||| |||||  ||||||||| |||||||    
T  10918121 ttttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatt 10918220  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaa 164  Q
    || |||||||||||| || |||| |||||||||| |||||||||    
T  10918221 tttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 25 - 167
Target Start/End: Complemental strand, 8074097 - 8073956
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   |||||||||||||||||| |    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatcatttt-g 8073999  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||| ||||  | | |||||||||  ||||||||||||    
T  8073998 ttgcattttacgtcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 43958264 - 43958326
Alignment:
Q  105 tccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    |||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggc 59  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 35427361 - 35427283
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 101  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||| || ||  ||| |||| ||||||||    
T  35427361 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaa 35427283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactca 66  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 15255850 - 15255906
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  15255850 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 15255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 6115662 - 6115604
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||| |||||||||||| || ||||| || |||| ||||| |||||||    
T  6115662 ttttaggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcct 6115604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  118 attttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||| |||||||||||| ||| |||||||||||| |  ||||| ||||| |||||||| ||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 43958205 - 43958254
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 71  Q
    ||||| |||||||| |||||||||| ||||||||||  ||||||||||||    
T  43958205 tttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 14055181 - 14055145
Alignment:
Q  12 taacatttcttttaggcttaattacacttttggtcct 48  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  14055181 taacatttctttttggcttaattactcttttggtcct 14055145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 28254971 - 28254919
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 28254919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 4e-80; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 19830418 - 19830588
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 19830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 37786766 - 37786935
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37786935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 6e-79
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 19590525 - 19590693
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccc 19590693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 35289448 - 35289278
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccc 35289278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 29100393 - 29100228
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 29100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 38858642 - 38858811
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38858742 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 38858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 34534338 - 34534169
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||     
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctacc 34534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 32005159 - 32004991
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 32004991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 2659388 - 2659217
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 2659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 3e-68
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 19591075 - 19590909
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591075 ttttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19590976  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  19590975 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 127; E-Value: 8e-66
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 23953268 - 23953106
Alignment:
Q  32 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 131  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  132 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 23953106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 4478247 - 4478077
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||     
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4478147 gttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 4478077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 38859191 - 38859025
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  38859191 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatt 38859092  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  38859091 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 4641443 - 4641604
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||| |||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacct 190  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacct 4641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 37787322 - 37787153
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 115  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  37787322 atttattttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaatta 37787223  T
Q  116 tcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 184  Q
    ||||||| ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||    
T  37787222 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 2658837 - 2659000
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||| ||||||| ||||| |  ||||||||||||||||||||  |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 32004612 - 32004774
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||     
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
    ||||||||||||| ||||||||| ||||| |  ||||| |||||||||||||| |||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 34533789 - 34533952
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||| |||||||||||||||     
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||| |||||||||||| ||||| |  |||||||||||||||||||| ||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 35288903 - 35289063
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
    ||||||||||||||||| ||  ||||| |  ||||| |||| ||||||||| |||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 19830965 - 19830804
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 38160947 - 38161093
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||| ||||    
T  38160947 tttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattattt 38161046  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    | |||||||||||||||||||  |||||||||| |||||||||||||    
T  38161047 ttgttgcatttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 23952727 - 23952892
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | ||||||||||||||||||||| | ||||| |  | ||| |||||||||||||| | ||||||||    
T  23952827 tggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  39 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 138  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  139 ctacctcccatttt 152  Q
    |||||||| |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||| ||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 28583437 - 28583577
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||| || ||||| |||||||||||||||||||     
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaa 164  Q
     ||||||||||||||||||| |||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 28584466 - 28584326
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  ||||||||||||||||||| |||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  127 gcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    | |||||||||| |||| |||||||||| ||||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 39137080 - 39137014
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaa 90  Q
    ||||||||||||||||||| ||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137080 aggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 35579333 - 35579264
Alignment:
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||| |||| ||| ||||||| |||||   ||| |||||||||| ||||||||||||||||||||||||    
T  35579333 ttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccc 35579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 34595319 - 34595263
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 81  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| |||||||||    
T  34595319 aggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgc 34595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 49064033 - 49064109
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 101  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||||| ||||  ||||  ||| ||| |||||||||    
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaa 49064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 787334 - 787279
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||| ||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  787334 taggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcct 787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 27245194 - 27245256
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||| ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  27245194 atttctttt-ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 32427461 - 32427398
Alignment:
Q  131 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||| ||||| ||||| |||||   ||| |||||||||||||||| ||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaactctaaaaacgcagagaaatgacagttttagacctaccc 32427398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||| |||| | |||||| || |||||||||| |||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 48247583 - 48247640
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||| |  |||||  | |||||||||| |||||||    
T  48247583 tttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcct 48247640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 7732478 - 7732648
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaatt 114  Q
    |||| ||||||||||||||||| |||||||||| |  |||||  | |||||||||| ||||||| || |||||||| | ||||||||  |||||| || |    
T  7732478 attttttttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccttaaact 7732576  T
Q  115 atcattttcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttag 186  Q
    || || ||  ||||| |||| |||||| ||||| |||||   ||||| ||||||| | |||| ||||||||||    
T  7732577 at-atgttttttgcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttag 7732648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 16917708 - 16917764
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||| |||||    
T  16917708 ttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtc 16917764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 4e-80; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 18257135 - 18257305
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 20741098 - 20741268
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||     
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 20741268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 10900480 - 10900307
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10900480 tttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 10900381  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900380 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 10900307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 15828187 - 15828018
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||| |    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828087 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 15828018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 11277127 - 11276959
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccc 11276959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 28472633 - 28472804
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  28472633 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 28472732  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28472733 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 28472804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 29859822 - 29859993
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  29859822 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 29859921  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29859922 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29859993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 31470865 - 31470693
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  31470765 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccc 31470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 2319669 - 2319832
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 186  Q
     |||||||||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 12935704 - 12935534
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||     
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||| |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccc 12935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 11444982 - 11445155
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  11444982 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatt 11445081  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || ||||||||||||||||||||  ||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  11445082 tttgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccc 11445155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 12935154 - 12935318
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  123 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 131; E-Value: 3e-68
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 10899942 - 10900108
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctaccc 10900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 1149977 - 1149808
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  126 tgcatttttcgtcctacctcccattttattctcca-aaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccc 1149808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 11445536 - 11445371
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11445536 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 11445437  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  11445436 ttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 22219902 - 22219737
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 22219803  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | |||||||||||||| |||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  22219802 ttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 23075675 - 23075512
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  124 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||| |||||||| | |||||  ||||||||| |||||||||| ||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 23073998 - 23074155
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23074090 ---catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacc 23074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 27 - 185
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  127 gcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttta 185  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 2322760 - 2322600
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacct 190  Q
    ||||||||||||||| | ||||||||||||| ||||| ||||||||| ||||||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagacct 2322600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||  || |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacc 189  Q
    | ||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 18504922 - 18505045
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  129 atttttcgtcctacctcccatttt 152  Q
    |||||||||||||||||| |||||    
T  18505022 atttttcgtcctacctcctatttt 18505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 20741650 - 20741485
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca---ttt 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |  |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 31470314 - 31470476
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||| ||||| |    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 18257682 - 18257563
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  126 tgcatttttcgtcctacctc 145  Q
    | ||||||||||||||||||    
T  18257582 tacatttttcgtcctacctc 18257563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 11276589 - 11276759
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||| ||| |||| |||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||| |    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || ||||||||||||||||||| ||||| |  |||||||||||||||||||| |||||||||| |||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctaccc 11276759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 29033436 - 29033577
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  128 catttttcgtcctacctcccattttatt-ctccaaaaacgca 168  Q
    ||  |||| ||||||| |||||||| || |||||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa--acggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||  |||||||||||| ||||||||| |    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  125 ttgcatttttcgtcctacctcccatttt 152  Q
    |||||||||||||||||||||| |||||    
T  15827739 ttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 18296135 - 18296285
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 115  Q
    |||| ||||||||||||||| | |||| |||||||||||||| | ||||||| ||| || |  |||||||||||||||||||||||| |||||||| |||    
T  18296135 attttttttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcattta 18296234  T
Q  116 tcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  18296235 tcatttttgttgcatttttcgtcctacc-cccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 114  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  126 tgcatttttcgtcctacctcccatttt 152  Q
    |||||||||| || ||||||| |||||    
T  4811701 tgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  |||||| |||||||||||| || ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  129 atttttcgtcctacctcccattttattctccaaa 162  Q
    ||||||||||||||| |||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 29035180 - 29035040
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    |||||||||||| |||  ||||||| | |||||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 82  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 35163734 - 35163564
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca-tttt 122  Q
    ||||||||||||||||||||||| ||  ||||| ||  ||||||||| |||| ||||| |||| ||| || |||||||  |||| | || |||   ||||    
T  35163734 aggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatca-aacaaaatcgtccctaaactatatgtttt 35163636  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
      ||||| |||| ||||||||||| |||||   |||||||||| ||||||||| |||||||||| |||||||    
T  35163635 ttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccc 35163564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 32836547 - 32836375
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| ||||||||||||||||| ||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| || ||| || | | ||     
T  32836547 tttttggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atg 32836449  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||  ||||| |||| ||||||||| | |||||   || || ||||| |||||||||||||||||||||||||||    
T  32836448 ttttttgcagttttagtcctaccttctattttcaacttcagaaacgaagagaaataacagttttagacctaccc 32836375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 5121034 - 5120970
Alignment:
Q  7 agttctaacatttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 71  Q
    ||||||| ||||  |||||||||||||||||||||||||||| |  ||||| || ||||||||||    
T  5121034 agttctaccattcattttaggcttaattacacttttggtccttgcattttgaccaactcacgaaa 5120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 4e-80; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 11090519 - 11090689
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 11090689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 40815895 - 40815722
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  40815895 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatt 40815796  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40815795 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 239350 - 239517
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  239449 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 239517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 22374318 - 22374485
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 26538096 - 26538262
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  26538196 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 9e-75
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 18451381 - 18451208
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  18451381 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatt 18451282  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18451281 tttgttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 9e-75
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 40027139 - 40027308
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 1978106 - 1978276
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1978276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 28616608 - 28616782
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28616608 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatt 28616707  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  28616708 tttgttgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccc 28616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 26538629 - 26538455
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26538629 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatt 26538530  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| |||||||| |  | ||| |||||||||||||| ||||||||||||||||||    
T  26538529 tttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctaccc 26538455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 43058333 - 43058501
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 43058501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 14432145 - 14432310
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||| ||||||||| |||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 14432310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 3025463 - 3025633
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     |||||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  3025563 tgttgcatttttcgtcctacc-cccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccc 3025633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 7446896 - 7446730
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446896 ttttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 7446797  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| |  |||||||||||||||||||| ||||||||||    
T  7446796 tttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 8425902 - 8425737
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 18450829 - 18450991
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||      
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 20444748 - 20444890
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  20444848 ttgcagttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 22374872 - 22374709
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||||| ||||| |  ||| | ||| |||||||||| ||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  128 catttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 28617160 - 28616998
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||| ||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||      
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtt 182  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  7446441 ttgcatttttcgtcatacc-cccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 43058881 - 43058717
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  43058881 tttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcattt 43058782  T
Q  122 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    | ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  43058781 t-gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 20440586 - 20440436
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  20440586 atttcttttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagtta 20440487  T
Q  116 tcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||| |||||| ||||||||||| | |||| ||||| ||||||||||||    
T  20440486 tcatttttgttgcagttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||| ||||| |  ||||| |||||||| |||||  |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 11091067 - 11090904
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |     
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||| ||||||||||||| |||| ||||| |  ||||| ||||||||| |||| ||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  127 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||| ||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 1978656 - 1978528
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||     
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  124 gttgcatttttcgtcctacctcccatttt 152  Q
    ||||||||||| ||||||||||| |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 35781207 - 35781067
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||| |||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  127 gcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 35779708 - 35779849
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||| ||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||     
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  124 gttgcatttttcgtcctacct 144  Q
    |||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 3026011 - 3025848
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |||    
T  3026011 tttttggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatt 3025914  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
    || ||||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  3025913 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 92; E-Value: 6e-45
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 14432692 - 14432525
Alignment:
Q  20 cttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 119  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||| ||| |||||||||| ||    
T  14432692 cttttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattat 14432593  T
Q  120 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||| |||||||||||| |||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  14432592 ttttgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| | || |||||||||||||||||||||| |||||||||||||||  |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
    |||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 8972239 - 8972378
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||| ||||||||||||||| ||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    |||||||||| ||||| || ||||||| ||||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 15551501 - 15551641
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  |||||||| |||||||||| ||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    |||||||||||| |||  ||||||||| |||||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 15552596 - 15552459
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||| ||||||||||||||| ||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacg 166  Q
     |||||||||||||||  |||||||   |||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 28143578 - 28143408
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||| |||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||| | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
      ||||| |||| ||||||| ||| |||||   ||||| |||||||||||||| ||||||||||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccc 28143408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||   ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || ||| || ||      
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttt 184  Q
    ||||| |||| ||||||||||| |||||   ||| | |||||||||||||| ||||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 14942394 - 14942225
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--ttt 121  Q
    ||||||||||||||||||||||| |||  ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||  |||| | ||||||||  |||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    |  ||||| |||| ||||||| ||| |||||   ||||| ||| ||||||||||  ||||||||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttcaactccagaaatgcagagaaatcgcagttttagaccta 14942225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 38007945 - 38008003
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  38007945 ttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 38008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 42192790 - 42192736
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 62952 - 63032
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 101  Q
    |||||||||||||||||||| |||||||    ||||| || |||||||||| ||||||| || ||||||||  ||||||||    
T  62952 ttttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaa 63032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 25336149 - 25336093
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  25336149 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 25336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 100  Q
    ||||||||||||||||||||||  ||||  || ||||| |||| || |||||||||||| |||| |||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||| |||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 43216265 - 43216202
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||| ||| |||||||||||||||||| ||||| | |||||| || |||||||||| |||||||    
T  43216265 atttatttcaggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 20128288 - 20128230
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||||||| |  ||||  || |||||||||| |||||||    
T  20128288 ttttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcct 20128230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 42192235 - 42192293
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||| ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  42192235 tttttggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 6949990 - 6949937
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 33921162 - 33921105
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  33921162 tttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 33921105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 24140223 - 24140167
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||| ||||||  | ||| || |||||||||| |||||||    
T  24140223 ttaggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcct 24140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 44220192 - 44220140
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    |||||||||||||||||| |||||||  ||||| || |||||||||| |||||    
T  44220192 aggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtc 44220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 1665 - 1835
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||     
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 2215 - 2051
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  123 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 25447783 - 25447613
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccc 25447613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 11153697 - 11153524
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  11153697 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatt 11153598  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11153597 tttgttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccc 11153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 12234326 - 12234497
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12234426 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccc 12234497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 25937659 - 25937838
Alignment:
Q  15 catttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 114  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937659 catttattttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 25937758  T
Q  115 atcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||| ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25937759 atcatttttgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 25937838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 33109686 - 33109852
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 46193948 - 46193782
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccc 46193782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 38962362 - 38962196
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctaccc 38962196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 15523780 - 15523611
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| |    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 15523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 23494445 - 23494610
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||  |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacc 23494610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 22434725 - 22434555
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  22434725 tttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatcattt 22434627  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22434626 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 22434555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 28 - 191
Target Start/End: Original strand, 4219559 - 4219722
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||| ||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 191  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaaccta 4219722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 48526195 - 48526363
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  48526295 ttgcatttttcgtcctacc-cccattttattctccaaaaatgcagagaaatgacagttttagatctaccc 48526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 51020792 - 51020965
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||||||||||||||||||| ||||| |||||||||  | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51020792 ttttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatt 51020891  T
Q  121 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  51020892 tttgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccc 51020965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 188  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 22434174 - 22434340
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434174 tttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 22434273  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || |||| |||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  22434274 tttgttgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 2118837 - 2118673
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||| |||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2118737 atttttcgtcctacc-cccattttattctccaaaaacgcagagaaataatagttttagacctaccc 2118673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 22170482 - 22170314
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||| ||||||||||||||| |    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  22170383 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccc 22170314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 4220109 - 4219943
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||||||    
T  4220109 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatt 4220010  T
Q  121 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    || ||||||||||||||||||||||| ||||| |  || ||||||||||||||||||||||||||||    
T  4220009 tttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 15523233 - 15523395
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 185  Q
     |||||||||||||||||||||| ||||| |  ||| | |||||||||||||| |||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 45082969 - 45082808
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 54995614 - 54995446
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||||     
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatcatttt- 54995516  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    |||||||||||||||||| | |||||||||||||| ||||||||| |||||| | |||||||||||||||    
T  54995515 gttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctacc 54995446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  123 cgttgcatttttcgtcctac 142  Q
     |||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 20471059 - 20470895
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  123 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 45082429 - 45082598
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    ||||| |||||||| ||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  123 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  45082528 tgttgcatttttcgtcctacc-cccattttattctccaaaaacacagagaaatgacaattttagacctaccc 45082598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||| ||||| |  | ||| ||| |||||||||| ||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 54995067 - 54995230
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||     
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||| | |||||||| ||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 107; E-Value: 7e-54
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  124 gttgcatttttcgtcctacctcccatttt 152  Q
    ||||||||||||||||||||||| |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 51021342 - 51021191
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  124 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 175  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 51021191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 25938217 - 25938090
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  125 ttgcatttttcgtcctacctcccatttt 152  Q
    |||||||||| ||||||||||| |||||    
T  25938117 ttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 11153145 - 11153307
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||| |    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  125 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||||||||||||||||||||| ||||| |  | ||| |||||||||||||| ||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 2118295 - 2118454
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  128 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||| ||||| |  || || ||||||||||||||  |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||| |||||| ||||| |  ||||| ||||||||| ||||  |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 20958408 - 20958264
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  20958408 tttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcattt 20958309  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    | ||||||||||| |||||||| |||||||||| |||||||||||||    
T  20958308 ttgttgcattttt-gtcctacc-cccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  123 cgttgcatttttcgtcct 140  Q
     |||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  43 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 142  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  143 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 44892692 - 44892552
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  |||| |||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  127 gcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 43243807 - 43243685
Alignment:
Q  44 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 143  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T
Q  144 tcccattttattctccaaaaacgc 167  Q
     |||||||||| ||||||||||||    
T  43243707 -cccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 48293592 - 48293735
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |  ||||||||| |||||||  || ||||||||||||||||     
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    |||||||||||| |||| ||  ||||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 12503913 - 12503813
Alignment:
Q  94 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  194 c 194  Q
    |    
T  12503813 c 12503813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 48713893 - 48713749
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    |||| ||||||||||||||  | |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||||||     
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||    
T  48713793 gttgcatttttcgtcctcccctccattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||||||||| ||||||||||||||| |    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  125 ttgcatttttcgtcctacc 143  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 48708293 - 48708431
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||     
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaa 162  Q
    ||||||||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||| |||||||||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   |||||||||||||||||| |||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  129 atttttcgtcctacctcccattttattctccaaa 162  Q
    ||||||||||||||| || ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  44 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 143  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||| ||||| ||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  144 tcccattttattctccaaaaa 164  Q
     |||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 26 - 167
Target Start/End: Complemental strand, 48295088 - 48294946
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||  ||| ||||||||||||||| ||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  126 tgcattttt-cgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||| ||||||||| ||||||||||  |||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| ||||||||||  |||||| || |||||||  |||||| |||||| ||||| ||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  126 tgcatttttcgtcctacctcccattttattctccaaa 162  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 44890518 - 44890658
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   ||||| ||||||  |||| |||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  127 gcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||| || |||| |||||||||| ||| ||||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 10258433 - 10258306
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||  ||||  ||  ||||||||||||||| |    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  125 ttgcatttttcgtcctacctcccatttt 152  Q
    ||||| |||| ||| |||| || |||||    
T  10258333 ttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  33 ttacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcattt 132  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| ||| |||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  133 ttcgtcctacctcccattttattctccaaaaa 164  Q
    |||||| |||  |||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  84 ttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 18752038 - 18751979
Alignment:
Q  135 cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccc 18751979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 17503973 - 17504141
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||| ||| ||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| |||||  || |||||| ||      
T  17503973 aggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtttt 17504071  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||| |||| ||||||||||| |||||   ||||| ||||| |||||||| ||||||||||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccc 17504141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 44220861 - 44220781
Alignment:
Q  87 taaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    |||||||||||||||  |||||||| |||||||||| ||| |||||||||| ||||| |  ||||||| ||||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 55189528 - 55189624
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttt 55189624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 167
Target Start/End: Complemental strand, 30598065 - 30597925
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctg-cccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||| |||||||||||||||||||||||||| || ||||||| || |||| ||| | |||||||| | ||||||||  |||| | |||||| ||||| |    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||| |||| |||||| | || ||||||   |||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacgc 30597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 55677505 - 55677451
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||| || ||||| || |||||||||| |||||||    
T  55677505 aggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 12593574 - 12593518
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 77  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  12593574 ttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 44219377 - 44219428
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||||||||||||||||||||||| ||||  || |||||||||| |||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 45838537 - 45838600
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||| ||||||||||| |||||||||||||||| || ||||| || ||||||| || |||||||    
T  45838537 attttttttaggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcct 45838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 46737203 - 46737148
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  46737203 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 46737148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 33689825 - 33689882
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||| |  ||||| || |||||| ||| |||||||    
T  33689825 tttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 33689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 35193406 - 35193475
Alignment:
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||| |||| |||||| |||| |||||   || || |||||||||||||| ||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaacttcagaaacgcagagaaatgacagttttagacctaccc 35193475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 17504369 - 17504337
Alignment:
Q  162 aaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||| ||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccc 17504337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 34789932 - 34789876
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    |||| ||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  34789932 ttagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 34789876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 41608964 - 41608908
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  41608964 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcct 41608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 143; Significance: 2e-75; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 755 - 920
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt-gttg 853  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 1296 - 1117
Alignment:
Q  16 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 115  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1296 atttcattttggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 1197  T
Q  116 tcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||| ||||||| ||||||||||||||| ||||| |  | ||| ||||||||| ||||  |||||||||||| ||||    
T  1196 tcatttttgttgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccaccc 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 143; Significance: 2e-75; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 4754 - 4584
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 123  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  124 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  65 cacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaa 163  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  164 acgcagagaaataacagttttag 186  Q
    | |||||||||| ||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 134222 - 134050
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||| |||||    
T  134222 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacattt 134123  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  134122 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 134050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 138; Significance: 2e-72; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 64301 - 64470
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 64470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 64847 - 64689
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||| || | ||||| |  ||||| ||||| ||| |||||||||||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttag 64689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 205911 - 205746
Alignment:
Q  28 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 127  Q
    ||||||||||||||| ||||||   ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||| ||  |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  128 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    || |||| ||||||| ||| |||||   ||||||||||||||||||||  |||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccc 205746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 210884 - 210787
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 122  Q
    |||||||||||||||||||||||||   ||||| || ||||| |||| ||||||||||  ||| |||  ||||||||| |||| | || |||||||||    
T  210884 aggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttt 210787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 126; Significance: 3e-65; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 42707 - 42536
Alignment:
Q  22 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 121  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  42707 tttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcattt 42608  T
Q  122 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    | ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42607 ttgtttcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 42536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 42172 - 42338
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  129 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    |||||| ||| ||||||| ||||| |  || || |||||||||||||| ||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctaccc 42338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 125; Significance: 1e-64; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| |    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  125 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18934 ttgcatttttcatcctacc-cccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 19171 - 19070
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19171 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19072  T
Q  121 tt 122  Q
    ||    
T  19071 tt 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 8e-63; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 10414 - 10250
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||| ||||||||    
T  10314 atttttcgtcctacc-cccattttattctccaaaaattcagagaaatgacagttttaaacctaccc 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 9935 - 10057
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||||||| | ||||||||| |||||||||||||||| ||| ||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  129 atttttcgtcctacctcccatttt 152  Q
    | ||||| |||||||||| |||||    
T  10035 a-ttttcatcctacctcctatttt 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 122; Significance: 8e-63; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 10640 - 10789
Alignment:
Q  45 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 144  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  145 cccattttattctccaaaaacgcagagaaataacagttttagacctaccc 194  Q
     ||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccc 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 11168 - 11007
Alignment:
Q  26 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 125  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  126 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    ||||||||||||||||||||| ||||| |  ||| | ||||||||||||||  |||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 568 - 709
Alignment:
Q  27 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||| |||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  127 gcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    | ||||||||||  ||||||||||| || |||||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 92; Significance: 6e-45; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 92; E-Value: 6e-45
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  25 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 124  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  125 ttgcatttttcgtcctacctcccatttt 152  Q
    ||||| |||||||||| || ||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  43 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 142  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  143 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 186  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

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Target: scaffold0157; HSP #2
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 16564 - 16664
Alignment:
Q  94 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 193  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  194 c 194  Q
    |    
T  16664 c 16664  T

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Target: scaffold0057 (Bit Score: 75; Significance: 9e-35; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 62000 - 61862
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   || ||||| ||||||||| |||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  129 atttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    ||||||||||||||| |||||||| | ||||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

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Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  24 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 100  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold1696 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 454 - 589
Alignment:
Q  30 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 129  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  ||||||||||||||||||| ||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  130 tttttcgtcctacctcccattttattctccaaaaacgc 167  Q
    |||||||||||| | |||||||||| ||| ||||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacgc 589  T

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Target: scaffold0076 (Bit Score: 69; Significance: 3e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  29 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 128  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  129 a 129  Q
    |    
T  8451 a 8451  T

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Target: scaffold0168 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  75 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 168  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 46819 - 46761
Alignment:
Q  21 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 79  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  46819 ttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 46761  T

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Target: scaffold1339 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 58 - 30
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgt 51  Q
    |||||||||||||||||||||||||||||    
T  58 ttaggcttaattacacttttggtcctcgt 30  T

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Target: scaffold0830 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 5380 - 5352
Alignment:
Q  23 ttaggcttaattacacttttggtcctcgt 51  Q
    |||||||||||||||||||||||||||||    
T  5380 ttaggcttaattacacttttggtcctcgt 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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