View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5556_low_24 (Length: 241)

Name: NF5556_low_24
Description: NF5556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5556_low_24
NF5556_low_24
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-223)||(81425-81651)
[»] chr8 (44 HSPs)
chr8 (12-126)||(12988428-12988542)
chr8 (12-126)||(33017214-33017328)
chr8 (14-126)||(8794307-8794419)
chr8 (10-126)||(18540296-18540413)
chr8 (10-125)||(6569733-6569849)
chr8 (12-87)||(19703488-19703563)
chr8 (30-104)||(6536538-6536612)
chr8 (12-105)||(20994440-20994534)
chr8 (12-104)||(16852340-16852432)
chr8 (12-104)||(18897166-18897258)
chr8 (14-105)||(2203494-2203585)
chr8 (10-104)||(968360-968454)
chr8 (14-92)||(3624582-3624660)
chr8 (12-104)||(23361633-23361725)
chr8 (24-104)||(35690048-35690128)
chr8 (12-107)||(29431011-29431106)
chr8 (27-105)||(1157074-1157152)
chr8 (55-105)||(13129711-13129761)
chr8 (13-87)||(29858050-29858124)
chr8 (12-96)||(31381356-31381437)
chr8 (12-105)||(44780097-44780190)
chr8 (12-104)||(8484999-8485091)
chr8 (15-87)||(18546363-18546435)
chr8 (12-79)||(5264544-5264611)
chr8 (12-107)||(8059632-8059727)
chr8 (12-83)||(26688865-26688936)
chr8 (11-94)||(28898483-28898566)
chr8 (60-126)||(29915881-29915948)
chr8 (54-105)||(33727856-33727907)
chr8 (59-105)||(3174788-3174834)
chr8 (58-104)||(3305172-3305218)
chr8 (12-102)||(6530807-6530896)
chr8 (55-105)||(11819819-11819869)
chr8 (55-105)||(27750773-27750823)
chr8 (55-105)||(35287759-35287809)
chr8 (65-98)||(27572253-27572286)
chr8 (12-105)||(28783060-28783153)
chr8 (24-105)||(43594301-43594382)
chr8 (11-87)||(6436556-6436632)
chr8 (32-92)||(12281514-12281574)
chr8 (12-104)||(28566105-28566196)
chr8 (12-104)||(28573728-28573819)
chr8 (53-125)||(33507577-33507649)
chr8 (32-104)||(40791879-40791951)
[»] chr3 (60 HSPs)
chr3 (11-125)||(37788428-37788542)
chr3 (12-126)||(27093323-27093437)
chr3 (12-126)||(16354855-16354968)
chr3 (57-125)||(15048023-15048092)
chr3 (15-118)||(53412948-53413052)
chr3 (24-126)||(30311318-30311421)
chr3 (55-126)||(20501739-20501810)
chr3 (55-125)||(28703366-28703437)
chr3 (12-126)||(46518628-46518743)
chr3 (12-104)||(14186648-14186739)
chr3 (55-126)||(3427515-3427586)
chr3 (12-122)||(32651403-32651513)
chr3 (61-126)||(34062509-34062575)
chr3 (24-105)||(8170684-8170765)
chr3 (12-126)||(40063619-40063735)
chr3 (12-104)||(5499391-5499483)
chr3 (12-107)||(10445120-10445216)
chr3 (11-125)||(4222140-4222255)
chr3 (12-126)||(11642170-11642285)
chr3 (61-107)||(34622522-34622568)
chr3 (70-126)||(10969878-10969935)
chr3 (24-104)||(11612311-11612391)
chr3 (32-104)||(12761532-12761604)
chr3 (11-87)||(27923044-27923120)
chr3 (59-110)||(10828711-10828762)
chr3 (24-118)||(19154643-19154738)
chr3 (8-93)||(203086-203171)
chr3 (32-105)||(4844494-4844567)
chr3 (32-105)||(4870190-4870263)
chr3 (55-126)||(37051255-37051327)
chr3 (55-126)||(44743816-44743888)
chr3 (24-87)||(8368800-8368863)
chr3 (12-103)||(14339610-14339701)
chr3 (12-126)||(26505322-26505437)
chr3 (55-102)||(39253740-39253787)
chr3 (72-107)||(42358017-42358052)
chr3 (55-90)||(47279402-47279437)
chr3 (32-106)||(33270454-33270528)
chr3 (55-105)||(33899657-33899707)
chr3 (12-90)||(35111180-35111258)
chr3 (24-125)||(45699890-45699992)
chr3 (93-126)||(468113-468146)
chr3 (12-105)||(10499092-10499185)
chr3 (71-104)||(26174164-26174197)
chr3 (15-68)||(28928899-28928952)
chr3 (55-104)||(31766727-31766775)
chr3 (29-125)||(34928903-34929000)
chr3 (55-100)||(36010785-36010830)
chr3 (55-104)||(44069801-44069850)
chr3 (64-105)||(51222174-51222215)
chr3 (55-104)||(52769967-52770016)
chr3 (24-104)||(2667874-2667954)
chr3 (19-126)||(2709384-2709492)
chr3 (12-104)||(8051214-8051306)
chr3 (59-126)||(8853760-8853828)
chr3 (55-103)||(9345245-9345293)
chr3 (32-92)||(21960571-21960631)
chr3 (55-126)||(27259204-27259276)
chr3 (57-105)||(30232375-30232423)
chr3 (55-107)||(51903859-51903911)
[»] chr2 (46 HSPs)
chr2 (12-118)||(40416359-40416466)
chr2 (11-125)||(42922413-42922529)
chr2 (12-126)||(34041549-34041664)
chr2 (30-126)||(30410510-30410607)
chr2 (12-126)||(4060175-4060290)
chr2 (12-107)||(19244109-19244204)
chr2 (12-126)||(11062360-11062474)
chr2 (11-105)||(42327378-42327472)
chr2 (12-124)||(45026743-45026856)
chr2 (12-104)||(11251087-11251179)
chr2 (12-126)||(4438940-4439055)
chr2 (55-125)||(13803538-13803609)
chr2 (12-105)||(37480075-37480168)
chr2 (24-100)||(3001391-3001467)
chr2 (12-126)||(19322768-19322883)
chr2 (12-117)||(29996430-29996536)
chr2 (12-105)||(42602554-42602647)
chr2 (55-126)||(2750587-2750659)
chr2 (24-87)||(12994377-12994440)
chr2 (55-110)||(14500320-14500375)
chr2 (12-87)||(29503271-29503346)
chr2 (12-126)||(5147641-5147755)
chr2 (14-104)||(12086113-12086203)
chr2 (13-126)||(16918539-16918653)
chr2 (12-105)||(23052506-23052599)
chr2 (59-126)||(21303955-21304023)
chr2 (62-126)||(40755644-40755708)
chr2 (12-87)||(28846691-28846766)
chr2 (12-87)||(39714992-39715067)
chr2 (28-105)||(21195659-21195736)
chr2 (10-87)||(26482091-26482167)
chr2 (55-104)||(28194246-28194294)
chr2 (12-104)||(1729816-1729908)
chr2 (32-104)||(21213789-21213861)
chr2 (55-126)||(41908599-41908671)
chr2 (70-104)||(3943790-3943824)
chr2 (54-104)||(33569842-33569892)
chr2 (55-93)||(33582016-33582054)
chr2 (55-105)||(33839243-33839293)
chr2 (70-104)||(36390681-36390715)
chr2 (12-105)||(727623-727716)
chr2 (55-92)||(4262298-4262335)
chr2 (55-104)||(17737608-17737657)
chr2 (9-89)||(24144673-24144751)
chr2 (12-104)||(29197360-29197452)
chr2 (12-104)||(32106566-32106658)
[»] chr5 (37 HSPs)
chr5 (12-126)||(21549099-21549213)
chr5 (12-126)||(25627057-25627171)
chr5 (12-126)||(7918430-7918545)
chr5 (12-110)||(14285161-14285259)
chr5 (12-110)||(34984806-34984904)
chr5 (12-125)||(30700580-30700692)
chr5 (12-126)||(19043458-19043572)
chr5 (14-118)||(18595970-18596075)
chr5 (25-125)||(37258328-37258429)
chr5 (8-104)||(18437081-18437177)
chr5 (10-105)||(16457808-16457903)
chr5 (11-104)||(16773806-16773899)
chr5 (12-87)||(87424-87499)
chr5 (32-118)||(18973985-18974067)
chr5 (12-110)||(26078029-26078127)
chr5 (12-104)||(29075781-29075873)
chr5 (24-83)||(892479-892538)
chr5 (12-104)||(26598524-26598614)
chr5 (55-125)||(31074275-31074346)
chr5 (55-105)||(43442239-43442289)
chr5 (58-126)||(17155868-17155937)
chr5 (11-104)||(21589287-21589380)
chr5 (12-125)||(43230736-43230852)
chr5 (12-104)||(6844729-6844821)
chr5 (12-87)||(22737082-22737157)
chr5 (55-125)||(25979213-25979284)
chr5 (12-87)||(30109309-30109384)
chr5 (12-125)||(30735029-30735146)
chr5 (12-83)||(30883203-30883274)
chr5 (24-107)||(41730554-41730637)
chr5 (24-90)||(16436630-16436695)
chr5 (55-104)||(3315258-3315307)
chr5 (55-104)||(21086757-21086806)
chr5 (71-104)||(25586983-25587016)
chr5 (55-104)||(29173533-29173582)
chr5 (55-87)||(3584686-3584718)
chr5 (71-126)||(30000175-30000231)
[»] chr7 (65 HSPs)
chr7 (12-126)||(26459371-26459486)
chr7 (12-126)||(39631844-39631959)
chr7 (12-125)||(43215184-43215298)
chr7 (35-104)||(21558151-21558220)
chr7 (24-126)||(2962471-2962574)
chr7 (55-126)||(18363739-18363810)
chr7 (29-118)||(33222387-33222477)
chr7 (12-110)||(33869423-33869521)
chr7 (30-126)||(25655189-25655286)
chr7 (55-122)||(21569997-21570065)
chr7 (12-104)||(23552118-23552210)
chr7 (54-125)||(29785263-29785335)
chr7 (12-104)||(30579335-30579427)
chr7 (11-125)||(5273552-5273667)
chr7 (12-126)||(17113795-17113910)
chr7 (12-107)||(22760863-22760958)
chr7 (24-125)||(21877820-21877922)
chr7 (12-105)||(15137553-15137646)
chr7 (12-105)||(17040995-17041088)
chr7 (24-92)||(14058265-14058333)
chr7 (24-92)||(14368293-14368361)
chr7 (55-125)||(37162312-37162383)
chr7 (24-94)||(41519258-41519328)
chr7 (15-104)||(4566412-4566501)
chr7 (12-85)||(7801180-7801253)
chr7 (55-104)||(31835235-31835284)
chr7 (32-125)||(47824563-47824656)
chr7 (14-110)||(7744090-7744186)
chr7 (11-87)||(25132379-25132455)
chr7 (12-104)||(38374583-38374675)
chr7 (11-87)||(39499720-39499796)
chr7 (12-107)||(23301583-23301678)
chr7 (55-105)||(279937-279987)
chr7 (12-125)||(5672531-5672645)
chr7 (12-125)||(5697583-5697697)
chr7 (55-105)||(9183174-9183224)
chr7 (12-86)||(23945861-23945935)
chr7 (55-105)||(29385726-29385776)
chr7 (55-104)||(2882993-2883042)
chr7 (26-107)||(11700179-11700259)
chr7 (12-124)||(27255333-27255446)
chr7 (55-126)||(9608590-9608662)
chr7 (55-126)||(9836162-9836234)
chr7 (55-107)||(13106763-13106815)
chr7 (24-92)||(45709704-45709772)
chr7 (24-103)||(43590919-43590998)
chr7 (15-125)||(45976885-45976996)
chr7 (12-87)||(48771938-48772013)
chr7 (55-105)||(18056758-18056808)
chr7 (81-122)||(21570076-21570118)
chr7 (12-78)||(25021345-25021411)
chr7 (37-87)||(29916809-29916859)
chr7 (15-105)||(41519093-41519183)
chr7 (10-104)||(48125159-48125252)
chr7 (12-78)||(48716280-48716346)
chr7 (12-105)||(5579217-5579310)
chr7 (24-105)||(11720943-11721024)
chr7 (13-86)||(22927477-22927550)
chr7 (12-124)||(27266759-27266872)
chr7 (71-104)||(41907626-41907659)
chr7 (38-126)||(42262056-42262145)
chr7 (12-81)||(42836008-42836077)
chr7 (55-104)||(49050475-49050524)
chr7 (15-87)||(15905675-15905746)
chr7 (55-107)||(25590654-25590706)
[»] chr1 (59 HSPs)
chr1 (14-125)||(33700735-33700847)
chr1 (12-125)||(36371470-36371584)
chr1 (12-126)||(4566548-4566662)
chr1 (12-123)||(8904414-8904526)
chr1 (30-125)||(50919972-50920068)
chr1 (12-126)||(2799862-2799977)
chr1 (24-126)||(8177143-8177246)
chr1 (12-110)||(9165173-9165271)
chr1 (29-126)||(11063573-11063671)
chr1 (55-122)||(15786286-15786353)
chr1 (36-118)||(3265948-3266030)
chr1 (8-105)||(37400270-37400367)
chr1 (12-105)||(51814494-51814587)
chr1 (24-105)||(52336757-52336838)
chr1 (12-104)||(12993895-12993987)
chr1 (24-104)||(34460893-34460973)
chr1 (55-126)||(40810510-40810582)
chr1 (24-125)||(1247125-1247227)
chr1 (24-126)||(17745218-17745320)
chr1 (12-125)||(30420310-30420423)
chr1 (24-110)||(35699964-35700052)
chr1 (63-126)||(29753700-29753764)
chr1 (12-87)||(19528328-19528403)
chr1 (11-92)||(2219971-2220052)
chr1 (55-104)||(19940856-19940905)
chr1 (36-93)||(27567117-27567174)
chr1 (12-105)||(31605831-31605924)
chr1 (12-104)||(6650595-6650687)
chr1 (24-126)||(21547441-21547544)
chr1 (25-104)||(28411343-28411422)
chr1 (6-105)||(31794247-31794346)
chr1 (55-105)||(1600275-1600325)
chr1 (12-106)||(42787208-42787302)
chr1 (43-105)||(51281382-51281444)
chr1 (55-104)||(27127337-27127386)
chr1 (32-105)||(31383781-31383854)
chr1 (55-107)||(16893437-16893489)
chr1 (59-118)||(32524378-32524438)
chr1 (55-107)||(43446006-43446058)
chr1 (24-96)||(51703791-51703863)
chr1 (33-104)||(1094546-1094617)
chr1 (79-125)||(3679276-3679323)
chr1 (28-126)||(14787297-14787396)
chr1 (12-87)||(16169979-16170054)
chr1 (24-71)||(35187931-35187978)
chr1 (13-104)||(44126396-44126487)
chr1 (32-87)||(52029938-52029993)
chr1 (55-105)||(6122837-6122887)
chr1 (32-78)||(36124853-36124899)
chr1 (55-105)||(44961808-44961858)
chr1 (59-105)||(45266881-45266927)
chr1 (71-104)||(8077698-8077731)
chr1 (54-87)||(9117161-9117194)
chr1 (71-104)||(9500468-9500501)
chr1 (71-104)||(15059515-15059548)
chr1 (71-104)||(18646904-18646937)
chr1 (41-86)||(21392866-21392911)
chr1 (12-104)||(7219902-7219994)
chr1 (55-87)||(38947473-38947505)
[»] chr4 (52 HSPs)
chr4 (12-118)||(37109320-37109427)
chr4 (15-126)||(7292759-7292871)
chr4 (12-126)||(15180741-15180853)
chr4 (30-126)||(16581711-16581808)
chr4 (10-126)||(7539588-7539704)
chr4 (27-126)||(38869783-38869883)
chr4 (12-126)||(4249177-4249292)
chr4 (12-125)||(19680750-19680864)
chr4 (12-126)||(1730450-1730565)
chr4 (24-125)||(2184994-2185096)
chr4 (30-126)||(23377974-23378071)
chr4 (12-104)||(7949438-7949530)
chr4 (59-126)||(24991574-24991642)
chr4 (12-104)||(46545711-46545803)
chr4 (12-126)||(31759619-31759734)
chr4 (59-125)||(33632098-33632165)
chr4 (31-125)||(44194946-44195041)
chr4 (12-87)||(47044717-47044792)
chr4 (29-114)||(10047997-10048083)
chr4 (32-125)||(11592115-11592209)
chr4 (57-126)||(27372618-27372688)
chr4 (55-105)||(51622528-51622578)
chr4 (62-126)||(6666387-6666452)
chr4 (24-125)||(13265071-13265172)
chr4 (12-105)||(28635696-28635789)
chr4 (12-104)||(37274443-37274536)
chr4 (7-107)||(4923545-4923645)
chr4 (12-104)||(2622379-2622475)
chr4 (10-105)||(8030187-8030282)
chr4 (55-125)||(46295140-46295211)
chr4 (56-125)||(20770955-20771025)
chr4 (33-104)||(19531986-19532057)
chr4 (59-125)||(32662801-32662868)
chr4 (61-126)||(2732043-2732109)
chr4 (55-105)||(51969060-51969110)
chr4 (24-93)||(306305-306374)
chr4 (12-105)||(5795392-5795485)
chr4 (71-104)||(9517754-9517787)
chr4 (24-105)||(19229191-19229271)
chr4 (12-105)||(19238560-19238653)
chr4 (71-104)||(34844871-34844904)
chr4 (71-104)||(40058965-40058998)
chr4 (15-104)||(41683752-41683841)
chr4 (71-104)||(49287909-49287942)
chr4 (55-92)||(49576890-49576927)
chr4 (12-105)||(51250505-51250598)
chr4 (12-105)||(55427183-55427276)
chr4 (12-40)||(2606436-2606464)
chr4 (72-104)||(5609315-5609347)
chr4 (54-98)||(24273257-24273300)
chr4 (55-107)||(32992655-32992707)
chr4 (55-87)||(56440444-56440476)
[»] scaffold0180 (1 HSPs)
scaffold0180 (24-118)||(19932-20026)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-125)||(94935-95044)
[»] chr6 (24 HSPs)
chr6 (12-126)||(12188264-12188379)
chr6 (36-106)||(4105075-4105145)
chr6 (12-125)||(13330087-13330201)
chr6 (16-118)||(27989627-27989729)
chr6 (32-105)||(6385882-6385955)
chr6 (70-126)||(11306135-11306192)
chr6 (55-126)||(23910074-23910144)
chr6 (55-125)||(15951264-15951335)
chr6 (24-87)||(34444815-34444878)
chr6 (55-104)||(11103419-11103468)
chr6 (12-92)||(12234503-12234583)
chr6 (12-104)||(33549104-33549196)
chr6 (32-87)||(10338175-10338230)
chr6 (55-105)||(14278094-14278144)
chr6 (55-105)||(28363980-28364030)
chr6 (9-125)||(3925741-3925858)
chr6 (55-126)||(7320764-7320835)
chr6 (30-126)||(21836768-21836864)
chr6 (55-123)||(2092495-2092564)
chr6 (55-104)||(6691535-6691583)
chr6 (71-104)||(11448922-11448955)
chr6 (55-104)||(28841457-28841506)
chr6 (11-87)||(14557961-14558037)
chr6 (35-126)||(31847046-31847138)
[»] scaffold0070 (2 HSPs)
scaffold0070 (11-126)||(42482-42597)
scaffold0070 (10-106)||(38884-38980)
[»] scaffold0517 (1 HSPs)
scaffold0517 (8-105)||(7709-7806)
[»] scaffold0211 (1 HSPs)
scaffold0211 (12-126)||(24053-24168)
[»] scaffold0063 (1 HSPs)
scaffold0063 (12-110)||(35367-35465)
[»] scaffold0318 (1 HSPs)
scaffold0318 (57-125)||(10615-10683)
[»] scaffold0238 (1 HSPs)
scaffold0238 (59-106)||(2693-2740)
[»] scaffold0074 (1 HSPs)
scaffold0074 (35-125)||(45721-45812)
[»] scaffold0006 (2 HSPs)
scaffold0006 (57-126)||(18344-18413)
scaffold0006 (24-104)||(162993-163073)
[»] scaffold0258 (1 HSPs)
scaffold0258 (12-104)||(15307-15399)
[»] scaffold0187 (2 HSPs)
scaffold0187 (24-125)||(12383-12486)
scaffold0187 (24-125)||(22711-22814)
[»] scaffold0126 (1 HSPs)
scaffold0126 (55-106)||(25329-25380)
[»] scaffold0118 (1 HSPs)
scaffold0118 (12-105)||(41616-41709)
[»] scaffold0299 (1 HSPs)
scaffold0299 (25-97)||(11541-11613)
[»] scaffold0032 (1 HSPs)
scaffold0032 (12-104)||(112282-112374)
[»] scaffold0194 (1 HSPs)
scaffold0194 (55-105)||(13029-13079)
[»] scaffold0199 (1 HSPs)
scaffold0199 (71-104)||(8520-8553)
[»] scaffold0003 (1 HSPs)
scaffold0003 (43-104)||(320073-320134)
[»] scaffold0955 (1 HSPs)
scaffold0955 (10-106)||(3461-3556)
[»] scaffold0291 (1 HSPs)
scaffold0291 (55-87)||(2471-2503)
[»] scaffold0221 (1 HSPs)
scaffold0221 (11-87)||(2910-2986)


Alignment Details
Target: scaffold0004 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 81651 - 81425
Alignment:
Q  1 ttggacctttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgcca 100  Q
    |||||||||||||| ||||| | |||| |||||| |||||  |||||| ||  ||||||||||||||| |||||||||| ||||||| || ||| |||||    
T  81651 ttggacctttgaactcactttggttggtctagtgatattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgattctccctgatgcca 81552  T
Q  101 atttgaggg-gttagtttaacttcttcnnnnnnnnnca---tcttgaatctttggtcggtgtttagcatttgatgatgaaaaatcaccttcaataccgat 196  Q
    ||||||||| ||||||||||||||||           |   |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||     
T  81551 atttgagggagttagtttaacttcttaaaaaaaaaaaaaaatcttgaatctttggtcagtgtttagcgtttgatgatgaaaaatcaccttcaataccgac 81452  T
Q  197 ttacaatctattttgtagttgccacat 223  Q
    |||||| ||||||||||||||||||||    
T  81451 ttacaacctattttgtagttgccacat 81425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 12988428 - 12988542
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||    
T  12988428 aacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaatttgaggggt 12988527  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  12988528 tagtttagcttcttc 12988542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 33017214 - 33017328
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||| ||  ||||| ||||||||||  ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  33017214 aacccacttgggttggccttgtcatattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaggggt 33017313  T
Q  112 tagtttaacttcttc 126  Q
    |||||||||||||||    
T  33017314 tagtttaacttcttc 33017328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 8794419 - 8794307
Alignment:
Q  14 cccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggtta 113  Q
    ||||||| ||||||| ||||||||||| ||||||||||  ||||||||||||||| | |||||||||||||||| |||||||| ||||||| ||||||||    
T  8794419 cccacttggattggcatagtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaatttaaggggtta 8794320  T
Q  114 gtttaacttcttc 126  Q
     |||| |||||||    
T  8794319 atttagcttcttc 8794307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 18540296 - 18540413
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-g 108  Q
    ||||||||||| | ||||||||||||||||| ||||| ||||   ||||| || ||||| |||||||||||||||||| ||||||||||||||||||| |    
T  18540296 tgaacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagag 18540395  T
Q  109 ggttagtttaacttcttc 126  Q
    ||||| |||| |||||||    
T  18540396 ggttaatttagcttcttc 18540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 6569849 - 6569733
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gg 108  Q
    ||||||||||||| ||||||||||| ||||| ||||| | ||   ||||||||||||||| |||| ||| |||||||| ||| ||||| |||||||| ||    
T  6569849 tgaacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaatttgaggg 6569750  T
Q  109 ggttagtttaacttctt 125  Q
    |||||||||| ||||||    
T  6569749 ggttagtttagcttctt 6569733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 19703563 - 19703488
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | ||||||||||||||||| ||||| |||| | |||||||||||||| ||||||||||||||||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 19703488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 6536538 - 6536612
Alignment:
Q  30 tagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||| ||||| |||||  |||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaattt 6536612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 20994534 - 20994440
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcct-ccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||||||||||||||||||| ||||   ||||||||||| ||| || |||||||| |||||| |||||||| ||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctggtaccaatttg 20994440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 16852340 - 16852432
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   ||||||||||||||  ||||||||||||||||| ||  | ||||||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaattt 16852432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 18897166 - 18897258
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||||||||| |||  |||| |||| | |||||||||||||| ||||||||| |||||||| |  |||||||||||||    
T  18897166 aacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaattt 18897258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 2203494 - 2203585
Alignment:
Q  14 cccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||| | ||||||||||||||||| ||||| ||||   |||||||||||||| ||||||||||| || ||| || | ||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttg 2203585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 968360 - 968454
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||   ||||||| ||||||||| ||||| ||||   ||||||||||||||  ||||||||||||||||| |||| | |||||||||    
T  968360 tgaacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaattt 968454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 3624582 - 3624660
Alignment:
Q  14 cccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    ||||||| | ||||||||||||||||| ||||| ||||   |||||||||||| | |||||||||||||||||| ||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 23361725 - 23361633
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||| ||| ||||||||||||||| |  |   |||||||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaattt 23361633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 35690128 - 35690048
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||| | ||    || |||||||||| |||||||||||||||||| ||||||||| ||||||    
T  35690128 ttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 35690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 29431011 - 29431106
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||| | ||||||| | ||||||| ||||| || |   ||||||||||||||| ||| ||||||||||||| ||| |||||| ||||||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgag 29431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 1157074 - 1157152
Alignment:
Q  27 gcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||| |||||||||||||||||||| ||||||||||||| ||| | |||||| |||| ||| |||| | | ||||||||    
T  1157074 gcctcgtggtattgacttggaacctgaaagtgtgctccttcttgatgtctcaagttcaattctctccgataccaatttg 1157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 13129711 - 13129761
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||| ||||||||| ||||| |||||||||||| |||||||||||||||||    
T  13129711 agtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttg 13129761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 29858124 - 29858050
Alignment:
Q  13 acccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||| ||||||||| ||||||||| ||||| |||    ||||||||||||||  |||||||||||||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgatt 29858050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 31381356 - 31381437
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggt 96  Q
    ||||||| | ||||| | ||||||||||||||||||| ||  |||||||||||||||   | |||||||||||||| ||||||||    
T  31381356 aacccacctggattgacatagtggtattgacttggaatctggaagtgtgctcctcct---gatctcaggttcgattctctctggt 31381437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 44780190 - 44780097
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | |||||||||||| |||| ||||| || |   |||||||||||||| ||||||||||||| ||||  |||| ||| |||||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttg 44780097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 8484999 - 8485091
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||| ||||||||  ||||| ||||   |||||||||||| || ||||||||  ||||||| |||| |||||||||||    
T  8484999 aacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaattt 8485091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 18546435 - 18546363
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||| |||| ||||||||||||| |||| |||| | ||  ||||||||||  |||||||||||||||||    
T  18546435 ccacttaggttggtctagtggtattgatttgggacctgagagcatgctcctcctcgaggtctcaggttcgatt 18546363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 5264544 - 5264611
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcag 79  Q
    ||||||||| | ||||||||||||||||| ||||||||||   | ||||||||||||  |||||||||    
T  5264544 aacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 8059632 - 8059727
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||| | |||||||  |||||||||||||| |  | | |||||| ||||||| |||||||||||||| ||| || ||| || |||||||||    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaatttgag 8059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 26688865 - 26688936
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttc 83  Q
    ||||||||| | ||||||| ||||| ||| ||||| ||||   |||||||||||||| ||||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttc 26688936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 28898566 - 28898483
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctg 94  Q
    |||||||||||| ||| ||||||| ||||| ||||||| || | ||||||| |||||| ||  | |||||||||||||| ||||    
T  28898566 gaacccacttaggttgacctagtgatattggcttggaatctgagagtgtgcccctcctcaatatttcaggttcgattttttctg 28898483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 29915948 - 29915881
Alignment:
Q  60 gctcctccttaaggtctcaggttcgattttctctggtgccaatttgagg-ggttagtttaacttcttc 126  Q
    ||||||||| |||||||||  ||||||||||||| |||||||||| ||| | |||||||| |||||||    
T  29915948 gctcctcctcaaggtctcatattcgattttctctagtgccaatttaaggtgtttagtttagcttcttc 29915881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 33727907 - 33727856
Alignment:
Q  54 aagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||| ||||||||||||||||||  |||| ||| |||||||    
T  33727907 aagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttg 33727856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 3174834 - 3174788
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||| |||| |||||||||||||||||| ||||||||| |||||||    
T  3174834 tgctcatcctcaaggtctcaggttcgattctctctggtgtcaatttg 3174788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 3305218 - 3305172
Alignment:
Q  58 gtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||| |||||||||  ||||||| ||||||||||||||||    
T  3305218 gtgctcctcctcaaggtctcaaattcgattatctctggtgccaattt 3305172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 6530807 - 6530896
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaat 102  Q
    ||||||||| | ||||||| ||||| ||| ||||| |||||  ||||||||||| || || ||||||||||||||| || | |||||||||    
T  6530807 aacccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcct-ctcaatgtctcaggttcgattctccccggtgccaat 6530896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 11819819 - 11819869
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| ||||||||||||||||||  |||| ||| |||||||    
T  11819819 agtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttg 11819869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 27750773 - 27750823
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| ||||||||||||||||||  |||| ||| |||||||    
T  27750773 agtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttg 27750823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 35287759 - 35287809
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| ||||| ||| |||||||| |||| ||||||||||||    
T  35287759 agtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttg 35287809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 27572286 - 27572253
Alignment:
Q  65 tccttaaggtctcaggttcgattttctctggtgc 98  Q
    |||| |||||||||||||||||||||||||||||    
T  27572286 tcctcaaggtctcaggttcgattttctctggtgc 27572253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 28783060 - 28783153
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||| | ||||||||| ||||  ||||   |||||||||||||| ||||||||| |||||||| ||   ||||||||||||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttg 28783153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 43594382 - 43594301
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||| ||||| ||| | | |||  | |||| ||||||| |||||||||||||||||| ||||| ||| |||||||    
T  43594382 ttggcctagtgatattggcttaggatctaggaatgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttg 43594301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 6436632 - 6436556
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||| | ||| ||| ||||||||| ||||| || ||  |||||||||||||  |||||||||| |||||||    
T  6436632 gaacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgatt 6436556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 12281514 - 12281574
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    ||||||||| ||||| |||| | ||||||| ||||||  ||||||||| ||||||||||||    
T  12281514 gtggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattttctc 12281574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 28566105 - 28566196
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||| |||||||||||||  |||| |||| | ||||||||||| || |||| |||| |||||||| ||| |||||| |||||    
T  28566105 aacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattctctttggtgctaattt 28566196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 28573728 - 28573819
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||| |||||||||||||  |||| |||| | ||||||||||| || |||| |||| |||||||| ||| |||||| |||||    
T  28573728 aacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattctctttggtgctaattt 28573819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 33507577 - 33507649
Alignment:
Q  53 aaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttctt 125  Q
    ||||||| |||||||| ||| |||||  |||||||||||||| || || ||||| || ||| |||||||||||    
T  33507577 aaagtgtactcctcctcaagatctcaaattcgattttctctgatgtcagtttgaaggattaatttaacttctt 33507649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 40791951 - 40791879
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||| |||| | | ||||||||||||| | |||| |||||||||||||||| ||| ||||||    
T  40791951 gtggtattggcctgggacctcagaatgtgctcctccttgaagtcttaggttcgattttctctagtgtcaattt 40791879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 37788542 - 37788428
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    |||||||||| | |||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  37788542 gaacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggg 37788443  T
Q  111 ttagtttaacttctt 125  Q
    ||| |||| ||||||    
T  37788442 ttaatttagcttctt 37788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 27093437 - 27093323
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||||||||||||| |||||||| |   |||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgaagggt 27093338  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  27093337 tagtttatcttcttc 27093323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 16354968 - 16354855
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||||||||||||| ||||||||||   |||||||||||||| | |||||||||||||||| ||||||||||||| || |||||     
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctggtgccaaattaagggg- 16354870  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  16354869 tagtttagcttcttc 16354855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 15048092 - 15048023
Alignment:
Q  57 tgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  15048092 tgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgagggggttagtttaacttctt 15048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 53412948 - 53413052
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggtta 113  Q
    |||||| | |||| |||||||||||| |||| |||||   |||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagggggtta 53413047  T
Q  114 gttta 118  Q
    |||||    
T  53413048 gttta 53413052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 30311318 - 30311421
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaactt 122  Q
    ||||||||||||||| | ||||| | ||   |||||||||||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||| |||    
T  30311318 ttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgagggggttagtttagctt 30311417  T
Q  123 cttc 126  Q
    ||||    
T  30311418 cttc 30311421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 20501739 - 20501810
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttcttc 126  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| || |||| |||||||    
T  20501739 agtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttgaggggctaatttagcttcttc 20501810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 28703437 - 28703366
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagg-ggttagtttaacttctt 125  Q
    |||||||||||| | |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  28703437 agtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttgaggaggttagtttagcttctt 28703366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 46518628 - 46518743
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||| ||||||||||| ||||| | ||   |||||||||||||| ||||| ||||||| |||| |||||| ||||||||||| ||||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgaggggg 46518727  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  46518728 ttagtttagcttcttc 46518743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 14186648 - 14186739
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||||||||||||| ||||| ||||  | ||||||||||||| |||||||||||||||||| |||| |||| ||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctgga-gtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaattt 14186739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 3427586 - 3427515
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttcttc 126  Q
    |||||||||||||| |||||||||| ||||||| ||||| |||||||||||||  ||||||||| |||||||    
T  3427586 agtgtgctcctcctcaaggtctcagattcgattctctctagtgccaatttgagcagttagtttagcttcttc 3427515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 32651513 - 32651403
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt-gagggg 110  Q
    ||||||||||| ||||||||||||||||| ||||| ||||   |||||||||||||| ||| |||||| ||||||| ||||| ||| |||||| || |||    
T  32651513 aacccacttag-ttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttagatggg 32651415  T
Q  111 ttagtttaactt 122  Q
     |||||||||||    
T  32651414 ctagtttaactt 32651403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 34062575 - 34062509
Alignment:
Q  61 ctcctccttaaggtctcaggttcgattttctctggtgccaatttgagg-ggttagtttaacttcttc 126  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||    
T  34062575 ctcctcctcaaggtctcaggttcaattctctctggtgccaatttgaggatgttagtttaacttcttc 34062509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 8170684 - 8170765
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||||| |||| ||| |   ||||||||||| || ||||||||||||||||||| |||||||| |||||||    
T  8170684 ttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttg 8170765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 40063619 - 40063735
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg- 110  Q
    ||||||||| | ||| | |||| |||||| ||||| | || | ||| |||||||||||||||||||| |||||||| ||||  ||||||||||||||||     
T  40063619 aacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaatttgaggggg 40063718  T
Q  111 -ttagtttaacttcttc 126  Q
     |||||||| |||||||    
T  40063719 tttagtttagcttcttc 40063735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 5499483 - 5499391
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||| ||||||||||||||  | || | |||||||||||||||||||||| |||||| ||| || | |||||||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtctaaggttctattctccccggtgccaattt 5499391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 10445216 - 10445120
Alignment:
Q  12 aacccacttagattggcctagtggta-ttgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||| | |||||||||||| | ||| ||||| ||||   ||||||||||||||  ||||||||||||||||| |||||||||| ||||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgag 10445120  T

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Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 4222140 - 4222255
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt-gaggg 109  Q
    |||||||||| | ||||| ||||||||||| ||||| | ||   |||||||||||||| || |||| |||||||||| ||||||||| |||||| |  |     
T  4222140 gaacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtga 4222239  T
Q  110 gttagtttaacttctt 125  Q
    ||||||||||||||||    
T  4222240 gttagtttaacttctt 4222255  T

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Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 11642285 - 11642170
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-ggg 110  Q
    ||||||||| |||||||||| ||||||  |||||| | || | | |||| ||||||| |||||||||||||||||| ||| | ||| |||||| || |||    
T  11642285 aacccacttggattggcctactggtataaacttgggatctgagattgtgatcctcctcaaggtctcaggttcgattatctttagtgtcaatttaagaggg 11642186  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  11642185 ttagtttagcttcttc 11642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 34622568 - 34622522
Alignment:
Q  61 ctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  34622568 ctcctcctcaaggtctcaggttcgattttctctggtgtcaatttgag 34622522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 10969935 - 10969878
Alignment:
Q  70 aaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||    
T  10969935 aaggtctcaggttcgattctctctggtgccaatttaagggggttagtttagcttcttc 10969878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 11612311 - 11612391
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||| |||||||| |||||| | ||   ||||||||||||||||||||||||||||||||  || | |||||||||||    
T  11612311 ttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgatgctccccggtgccaattt 11612391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 12761532 - 12761604
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||| ||||   |||||| |||||||| || ||||||||||||||||| | |||||||||||    
T  12761532 gtggtattgacttgggacctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgccaattt 12761604  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 27923120 - 27923044
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||||| ||||||| ||||||||| ||||| || |  ||||||||||||||| |  |||||||||||||||    
T  27923120 gaacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgatt 27923044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 10828762 - 10828711
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  10828762 tgctcctacttaaggtctcaggttcgattatctatgatgccaatttgagggg 10828711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 19154643 - 19154738
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagttta 118  Q
    |||||||||| |||||| ||||   ||| | |||||||||||||| |||||||||||||||||| ||| || || ||||||| | |||||||||||    
T  19154643 ttggcctagttgtattggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgattctctttgatgtcaatttgggtgggttagttta 19154738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 203086 - 203171
Alignment:
Q  8 tttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctct 93  Q
    ||||||||||||| | ||||||||||||||||||||||| | |    ||||||||  |||||||||| | |||||||||| |||||    
T  203086 tttgaacccacttgggttggcctagtggtattgacttgggatcagggagtgtgcttttccttaaggtttgaggttcgattatctct 203171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 4844567 - 4844494
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||| | ||   ||||||||||||||  |||||||||| |||||| |||| ||||||||||||    
T  4844567 gtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttg 4844494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 4870263 - 4870190
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||| | ||   ||||||||||||||  |||||||||| |||||| |||| ||||||||||||    
T  4870263 gtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttg 4870190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 37051327 - 37051255
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    |||||| |||||||||| ||||||||||||||| ||||| |  || |||||| |||||||||||| |||||||    
T  37051327 agtgtgttcctccttaaagtctcaggttcgattctctcttgcaccgatttgagggggttagtttagcttcttc 37051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 44743888 - 44743816
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    ||||||||||||||  ||||||||||||||||| ||||  ||||||||||| | |||||| |||| |||||||    
T  44743888 agtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 8368863 - 8368800
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||||||||||||||| |||||   ||||||||| ||||  |||||||||||| ||||    
T  8368863 ttggcctagtggtattgacttgaaacctggtagtgtgctcatcctcgaggtctcaggtttgatt 8368800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 14339610 - 14339701
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatt 103  Q
    |||||| || ||||||||| ||||||||| ||||| |  |   |||||||||||||| || ||||||||||||||| || || |||||||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 14339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 26505437 - 26505322
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| |||||| | |||||||| | ||||| |  |  ||||||||||||| | ||| ||| |||||  ||| |||||||| ||||||| | ||||    
T  26505437 aacccacttggattggtccagtggtataggcttgggatatggaagtgtgctcctcttcaagatctgaggttgaattctctctggtaccaatttcaggggg 26505338  T
Q  111 ttagtttaacttcttc 126  Q
    ||||||||||||||||    
T  26505337 ttagtttaacttcttc 26505322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 39253740 - 39253787
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaat 102  Q
    |||||||||||| | |||||||||||||||||| |||||| |||||||    
T  39253740 agtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 42358017 - 42358052
Alignment:
Q  72 ggtctcaggttcgattttctctggtgccaatttgag 107  Q
    |||||||||||||||||||||||| |||||||||||    
T  42358017 ggtctcaggttcgattttctctggcgccaatttgag 42358052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 47279437 - 47279402
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttc 90  Q
    |||||||||||||||||||||||| |||||||||||    
T  47279437 agtgtgctcctccttaaggtctcatgttcgattttc 47279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 33270528 - 33270454
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    ||||||||||||||| ||||  ||||||| ||| ||| |||||||||||||  ||| |||| |||| ||||||||    
T  33270528 gtggtattgacttgggacctctaagtgtgttccacctaaaggtctcaggtttcattctctccggtggcaatttga 33270454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 33899657 - 33899707
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||  ||||||||||||||||| ||| ||||| |||||||    
T  33899657 agtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaatttg 33899707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 35111180 - 35111258
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttc 90  Q
    ||||||||| |||||||||||||| ||||| |||  ||||   ||||||||| ||||  |||||||| |||||||||||    
T  35111180 aacccacttggattggcctagtggcattgatttgagacctgggagtgtgctcatcctcgaggtctcatgttcgattttc 35111258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 45699992 - 45699890
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaactt 122  Q
    |||||||| ||||||||| |||| || | | ||||||||||||||||| || | || ||||||| ||||  |||||||||| || ||| || ||||||||    
T  45699992 ttggcctattggtattgatttgggacttgagagtgtgctcctccttaaagtttgagattcgattctctcgtgtgccaatttaagtgggctaatttaactt 45699893  T
Q  123 ctt 125  Q
    |||    
T  45699892 ctt 45699890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 468113 - 468146
Alignment:
Q  93 tggtgccaatttgaggggttagtttaacttcttc 126  Q
    |||||||||||||||||||||||||| |||||||    
T  468113 tggtgccaatttgaggggttagtttagcttcttc 468146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 10499185 - 10499092
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||| ||||||||| ||||| | ||   ||| ||||| ||||| ||||||||||||||||| |||| | || |||||||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttg 10499092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 26174164 - 26174197
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||||||| |||||||||||||||    
T  26174164 aggtctcaggttcgatttcctctggtgccaattt 26174197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 28928952 - 28928899
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctcct 68  Q
    |||||| ||||||||||||||||||| ||||| | || | ||||||||||||||    
T  28928952 ccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctcct 28928899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 31766727 - 31766775
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||| ||||||||||||||||||||| ||||| || ||||||    
T  31766727 agtgtgctcctc-ttaaggtctcaggttcgatttcctctgatgtcaattt 31766775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 34929000 - 34928903
Alignment:
Q  29 ctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttctt 125  Q
    |||||| ||| ||||| | |||| | ||| ||||||||||||||||||||| ||||||| |||||  ||| ||||| || | |||| |||||||||||    
T  34929000 ctagtgatatggacttaggacctgagagtatgctcctccttaaggtctcagattcgattctctctaatgctaatttaagagagttaatttaacttctt 34928903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 36010785 - 36010830
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgcca 100  Q
    |||||||||||||| || |||||| |||||||| ||||||||||||    
T  36010785 agtgtgctcctcctcaaagtctcaagttcgattctctctggtgcca 36010830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 44069801 - 44069850
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||| ||||||||||||| |||| | || |||||||||||    
T  44069801 agtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaattt 44069850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 51222174 - 51222215
Alignment:
Q  64 ctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||| ||||||||||||||| ||||| |||||||||||    
T  51222174 ctccttaaagtctcaggttcgattctctctcgtgccaatttg 51222215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 52770016 - 52769967
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||| ||||||||||||||||| ||| | ||| ||||||    
T  52770016 agtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaattt 52769967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 2667874 - 2667954
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||| ||||||||| ||||| | ||   ||||||||| ||||  ||||||||||||||||| ||||| ||| ||||||    
T  2667874 ttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaattt 2667954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 2709384 - 2709492
Alignment:
Q  19 ttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagttt 117  Q
    |||| |||||||||||||||||  |||| | ||  |||| ||||||||||  |||| | ||||| |||| |||||| |||||||||| | | ||||||||    
T  2709384 ttaggttggcctagtggtattgtgttgggatctggaagtatgctcctcctcgaggttttaggtttgattctctctgatgccaatttgggtgagttagttt 2709483  T
Q  118 aacttcttc 126  Q
    | |||||||    
T  2709484 agcttcttc 2709492  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 8051214 - 8051306
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||| ||||||||| ||||| ||||   ||| |||| |||||  |||||||| ||||||||  ||| |||||||||||    
T  8051214 aacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaattt 8051306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 8853828 - 8853760
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    ||||||||||| |||||||| |||||||  ||  ||||||||||||| | |||||| ||||||||||||    
T  8853828 tgctcctccttgaggtctcatgttcgatcctccttggtgccaatttgggtgggttaatttaacttcttc 8853760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 9345293 - 9345245
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatt 103  Q
    |||||||||||||| ||||||| |||||||||| || |||||| |||||    
T  9345293 agtgtgctcctcctaaaggtcttaggttcgattctccctggtgtcaatt 9345245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 21960571 - 21960631
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    ||||||||| ||||| |||| | ||||||||||||||  ||||||||| ||||||| ||||    
T  21960571 gtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 27259204 - 27259276
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    ||||||||||||||  |||| ||||||| |||| |||||| || |||||||| |||||||||||  |||||||    
T  27259204 agtgtgctcctcctcgaggtttcaggtttgattctctctgatgtcaatttgagggggttagttttgcttcttc 27259276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 30232375 - 30232423
Alignment:
Q  57 tgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||| | |||||||||||| ||| |||| ||||||||||||    
T  30232375 tgtgctcctcctcatggtctcaggttccattctctccggtgccaatttg 30232423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 51903911 - 51903859
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||||||||   |||||||||||||||| |||| |||| |||||||||    
T  51903911 agtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgag 51903859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 40416466 - 40416359
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-agggg 110  Q
    ||||||||| | ||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaatttgaagggg 40416367  T
Q  111 ttagttta 118  Q
    ||||||||    
T  40416366 ttagttta 40416359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 42922413 - 42922529
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctcct-taaggtctcaggttcgattttctctggtgccaatttga-gg 108  Q
    |||||||||| | ||||||||||||||||| ||||||||||   ||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||    
T  42922413 gaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaatttgatgg 42922512  T
Q  109 ggttagtttaacttctt 125  Q
    |||||||||| ||||||    
T  42922513 ggttagtttagcttctt 42922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 34041664 - 34041549
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||||||||||||||||||| | | || | |||||||||||||| ||||||||||||| ||||  ||||||||||||||||| ||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaatttgaggggg 34041565  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  34041564 ttagtttagcttcttc 34041549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 30410607 - 30410510
Alignment:
Q  30 tagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    ||||||||||| ||||| |||||  |||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  30410607 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctggtgccaatttgagggggttagtttagcttcttc 30410510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 4060290 - 4060175
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | |||||||||||||||||  ||| ||||| | |||||||| ||||| ||| |||||||||||||| ||||||||| |||||||| ||||    
T  4060290 aacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaatttgaggggg 4060191  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  4060190 ttagtttagcttcttc 4060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 19244109 - 19244204
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||| | |||| ||| |||||||||||||| |||| | |||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgag 19244204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 11062360 - 11062474
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||||||| ||||| |||||||| |   |||||||| ||||| ||||||||||||| |||| ||||| ||| |||||||||| ||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaatttgaggagt 11062459  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  11062460 tagtttagcttcttc 11062474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 42327472 - 42327378
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||| | ||||||||||||||||| ||||| ||||   |||||||||||||| |||||||||||||||||| |||  ||||||||||||    
T  42327472 gaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttg 42327378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 45026743 - 45026856
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | |||| ||| | ||| ||||||||||| ||  |||||||||||||| ||||||||| ||| |||| |||||||||||||||||| ||||    
T  45026743 aacccacttggtttggtctattagtaatgacttggaacttaggagtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaatttgaggggg 45026842  T
Q  111 ttagtttaacttct 124  Q
    |||||||| |||||    
T  45026843 ttagtttagcttct 45026856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 11251087 - 11251179
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||| ||||| ||||||||||| ||||| || |  ||||||||||||||| ||||||||||||| |||| ||||||||| ||||||    
T  11251087 aacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaattt 11251179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 4439055 - 4438940
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-ggg 110  Q
    ||||||||| | |||||||| ||||||| |||||| | || | |||||||||||||| |||||| || |||||||| | |||||| |||||||||| |||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgattctttctggtaccaatttgagaggg 4438956  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  4438955 ttagtttagcttcttc 4438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 13803538 - 13803609
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||    
T  13803538 agtgtgctcctcctcaaggtctcaggttcgattatctctgatgccaatttgagggggttagtttaccttctt 13803609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 37480075 - 37480168
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||| ||||||||| ||||| |||| | |||||||||||||| |||||||||||||||||| || | ||| ||||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttg 37480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 3001391 - 3001467
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgcca 100  Q
    ||||||||||||||||||||||  | |||  ||||||||||||||| || |||||||||||||| ||||||||||||    
T  3001391 ttggcctagtggtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgattatctctggtgcca 3001467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 19322768 - 19322883
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagg-gg 110  Q
    ||||||||| | |||  ||||||||||||  |||| ||||   |||||||||||| | |||||||| |||| |||| ||||| |||||||||||||| ||    
T  19322768 aacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaatttgaggagg 19322867  T
Q  111 ttagtttaacttcttc 126  Q
    ||||||||||||||||    
T  19322868 ttagtttaacttcttc 19322883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 29996536 - 29996430
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt-gagggg 110  Q
    ||||||||||||||||||||||||||||  |||||||| |   | ||| |||| |||||||||||||||||||||| |||| | ||| ||||| ||| ||    
T  29996536 aacccacttagattggcctagtggtattagcttggaacatgtgaatgtactccgccttaaggtctcaggttcgattctctcggatgctaatttggagagg 29996437  T
Q  111 ttagttt 117  Q
    |||||||    
T  29996436 ttagttt 29996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 42602554 - 42602647
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   ||||||||||| || ||||||| ||||| |||| |||| ||||||||||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttg 42602647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 2750659 - 2750587
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    ||||||||| |||| ||||||||| |||||||| ||||| |||||||||||| |||||||||||| |||||||    
T  2750659 agtgtgctcttcctcaaggtctcatgttcgattctctctagtgccaatttgagggggttagtttagcttcttc 2750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 12994440 - 12994377
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||| |||||||||||||||||| ||||   |||||||||||||||||||||||| ||||||||    
T  12994440 ttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgatt 12994377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 14500320 - 14500375
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||    
T  14500320 agtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgagggg 14500375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 29503271 - 29503346
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | |||||||||||||||||  |||| ||||   |||||||||||||| ||||||||||||||||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 29503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 5147755 - 5147641
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | |||| |||||||||||||||||  | ||   ||| ||||||| || |||||||| | ||||||| ||||| |  ||||||||||||||    
T  5147755 aacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctcttgcaccaatttgaggggt 5147656  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  5147655 tagtttagcttcttc 5147641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 12086203 - 12086113
Alignment:
Q  14 cccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||  ||||||| ||||||||| ||||| ||||  ||||||||||||||| |||||||| |||||||||  ||| ||||| |||||    
T  12086203 cccacttaagttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaattt 12086113  T

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Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 16918653 - 16918539
Alignment:
Q  13 acccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt-gaggggt 111  Q
    |||||||| | |||||||||||||||||  |||| | ||   |||||||||||||| ||||||| ||||| |||| |||||||||||| ||| || || |    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctggtgccactttggatggtt 16918554  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  16918553 tagtttagcttcttc 16918539  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 23052599 - 23052506
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||| ||||||| ||||||||| ||||| || |   |||||||| ||||| |||||||||||||||||| || || |||||| ||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttg 23052506  T

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Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 21304023 - 21303955
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    |||||||||| ||||| |||||||||||| ||||||||| |||||||| ||||||| |||| |||||||    
T  21304023 tgctcctcctgaaggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttcttc 21303955  T

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Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 40755644 - 40755708
Alignment:
Q  62 tcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttcttc 126  Q
    ||||||| ||||||| |||||||||| |||||| || ||| |||||||||||||||| |||||||    
T  40755644 tcctcctcaaggtcttaggttcgattctctctgatgtcaacttgaggggttagtttaccttcttc 40755708  T

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Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 28846691 - 28846766
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||||| |||  |||||||||||||||||| ||||   ||||||||||||||  | |||||||||||||||    
T  28846691 aacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

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Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 39714992 - 39715067
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | ||||| | ||||||||||||||| ||||   ||||||||||||||  |||||||||||||||||    
T  39714992 aacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 39715067  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 21195736 - 21195659
Alignment:
Q  28 cctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||| | |||||||| |   |||||||||||||| ||||||||||||||||||  |||| ||| |||||||    
T  21195736 cctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttg 21195659  T

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Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 26482091 - 26482167
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||||||| |||||||  |||| ||| ||||| |||||  ||||||||||| || ||||||||||||||||||    
T  26482091 tgaacccacttaggttggcctgatggtgttggcttgggacctaggagtgtgctcct-ctcaaggtctcaggttcgatt 26482167  T

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Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 28194294 - 28194246
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  28194294 agtgtgctcctc-ttaaggtcttaggttcgattctctctggtgccaattt 28194246  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 1729816 - 1729908
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | |||| |||||||||||| ||||| || |   ||||||||||||||  |||||| || || |||| ||||||||||||||||    
T  1729816 aacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctggtgccaattt 1729908  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 21213789 - 21213861
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| ||||| ||||   |||||| |||||||| ||||||||||||||||| || | |||||||||||    
T  21213789 gtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaattt 21213861  T

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Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 41908671 - 41908599
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    |||||||||||||| ||||||||| |||||||| || | |||||||||||| | ||| ||||||| |||||||    
T  41908671 agtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagcttcttc 41908599  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 3943790 - 3943824
Alignment:
Q  70 aaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||| ||||||||||||||||||||||||    
T  3943790 aaggtctcagattcgattttctctggtgccaattt 3943824  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 33569892 - 33569842
Alignment:
Q  54 aagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||| ||||  ||||||||||||||||| |||||||||| |||||    
T  33569892 aagtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaattt 33569842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 33582016 - 33582054
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctct 93  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  33582016 agtgtgctcctccttgaggtctcaggttcgattctctct 33582054  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 33839293 - 33839243
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| |||||||||||||| ||| | |||||||| ||||||    
T  33839293 agtgtgctcctcctcaaggtctcaggttcaattctttctggtgctaatttg 33839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 36390715 - 36390681
Alignment:
Q  70 aaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||||| |||||||||||||||    
T  36390715 aaggtctcaggttcgatttcctctggtgccaattt 36390681  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 727716 - 727623
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| ||||||| ||||| ||||| ||||| ||| |  |||||| || |||| ||  | ||| |||||||| |||||||||||||||||    
T  727716 aacccacttggattggcttagtgttattggcttgggaccgaggagtgtgttcgtcctcaaaatttcatgttcgattctctctggtgccaatttg 727623  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 4262335 - 4262298
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  4262335 agtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 17737657 - 17737608
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||| ||||||||| |||||||| || || ||||||||||    
T  17737657 agtgtgctcctcctcaaggtctcatgttcgattatccctagtgccaattt 17737608  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 24144673 - 24144751
Alignment:
Q  9 ttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatttt 89  Q
    |||||||||||| |||||||||  |||||||||||||| ||||   ||||| |||||| |  || ||||||||||||||||    
T  24144673 ttgaacccacttggattggcctgatggtattgacttgggacct--gagtgtactcctcttcgagatctcaggttcgatttt 24144751  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 29197452 - 29197360
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||| | ||||||||||||||| || |   ||||||||||||||| | |||||| |||||||| |  | |||||||||||    
T  29197452 aacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaattt 29197360  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 32106566 - 32106658
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||| ||||| ||||||||| ||||   ||||||||||  || |||||||  || |||||| |||| |||||||||||    
T  32106566 aacccacttgggttggcctggtggtgttgacttgggaccttggagtgtgctccctctcaaggtcttgggctcgattctctccggtgccaattt 32106658  T

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Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 21549213 - 21549099
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaatttgaggggt 21549114  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  21549113 tagtttagcttcttc 21549099  T

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Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 25627057 - 25627171
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||||||||||||| |||||||| |   |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttgaggggt 25627156  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  25627157 tagtttagcttcttc 25627171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 7918545 - 7918430
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg- 110  Q
    ||||||||| | ||||||||||||||||| ||||||||||   ||||  |||||||| ||||||| |||||||||| ||||||||||||||||||||||     
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctggtgccaatttgaggggt 7918446  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  7918445 ttagtttagcttcttc 7918430  T

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Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 14285161 - 14285259
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||| | |||||| ||||| |||| ||||||||||   |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  14285161 aacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggg 14285259  T

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Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 34984806 - 34984904
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||| | |||| |||||||||||| ||||||||||   |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaatttgagggg 34984904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 30700692 - 30700580
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatt-tgagggg 110  Q
    ||||||||||| |||||||||| ||||||||||| ||||| | ||||  ||||| ||||||||||||||||| ||| ||||||||| |||||   |||||    
T  30700692 aacccacttaggttggcctagtcgtattgacttgtaacctgagagtg--ctccttcttaaggtctcaggttcaattatctctggtgtcaattgaaagggg 30700595  T
Q  111 ttagtttaacttctt 125  Q
    |||||||||||||||    
T  30700594 ttagtttaacttctt 30700580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 19043458 - 19043572
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||||||| |||||||||||||| |   |||||| |||| || || ||||||||||| ||  ||||| |||||||||||||||||    
T  19043458 aacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggttcaatcctctctagtgccaatttgaggggt 19043557  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  19043558 tagtttagcttcttc 19043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 18596075 - 18595970
Alignment:
Q  14 cccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggtt 112  Q
    ||||||| |||||  |||||||||||| ||||  ||||   | |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||    
T  18596075 cccacttggattgatctagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctggtgccaatttgagggggtt 18595976  T
Q  113 agttta 118  Q
    ||||||    
T  18595975 agttta 18595970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 37258429 - 37258328
Alignment:
Q  25 tggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttc 123  Q
    |||| ||||||||||  ||||| | |||  |||||||||||||| ||||| |||||||||||| ||||||||| |||||||| |||||||||||| ||||    
T  37258429 tggcttagtggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttc 37258330  T
Q  124 tt 125  Q
    ||    
T  37258329 tt 37258328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 18437081 - 18437177
Alignment:
Q  8 tttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||| |||||||| |||||||||||||||| |||||| || | | |||||||||||||| || || || ||||||||| ||||| ||||||||||    
T  18437081 tttgaatccacttaggttggcctagtggtattaacttgggacttgagagtgtgctcctcctcaaagtttcgggttcgattctctctagtgccaattt 18437177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 16457808 - 16457903
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||| ||||||| ||||||||| ||||| ||||   |||||||||||||| ||||||||| |||| ||| || | ||||||||||||    
T  16457808 tgaacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaatttg 16457903  T

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Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 16773806 - 16773899
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||   |||| || ||||||||||||||| ||||   ||||||||||||||  ||||||||||||||||| |||||| |||||||||    
T  16773806 gaacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaattt 16773899  T

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Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 87499 - 87424
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | ||||||||||||||||| ||||||| ||   |||||||||||||| ||||||||||||| ||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgatt 87424  T

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Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 18973985 - 18974067
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagttta 118  Q
    ||||||||||||||| ||||     |||||||||||| ||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  18973985 gtggtattgacttgggacct-----tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtgggttagttta 18974067  T

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Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 26078127 - 26078029
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||| | |||||||||||||||||  |||| || |   ||| |||| ||| | |||||||||||||||||| ||||| ||||||||||||||||    
T  26078127 aacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaatttgagggg 26078029  T

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Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 29075781 - 29075873
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | || |||||||||||||| ||||| | ||   ||||||||||||||  || ||||| |||||||| ||||||||||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaattt 29075873  T

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Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 892538 - 892479
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttc 83  Q
    ||||||||||||||||| ||||| |||| | ||||| |||||||| ||||||||||||||    
T  892538 ttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcaggttc 892479  T

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Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 26598524 - 26598614
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt-ttctctggtgccaattt 104  Q
    ||||||||| ||||||||||||||||||| ||||| | || | ||||||||||||   ||  | |||||||||||| |||||||||||||||||    
T  26598524 aacccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctc---aaattttcaggttcgattcttctctggtgccaattt 26598614  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 31074275 - 31074346
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttctt 125  Q
    |||||| ||||||| ||| |||||||||||||| |||||||||||||||| || || |||||||| ||||||    
T  31074275 agtgtgttcctcctcaagatctcaggttcgattctctctggtgccaatttaagaggattagtttagcttctt 31074346  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 43442239 - 43442289
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| |||||||||||||||||| |||||| || |||||||    
T  43442239 agtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttg 43442289  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 17155868 - 17155937
Alignment:
Q  58 gtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    ||||||||||| ||||||||||||| |||| ||| || |||||||||||| ||| || ||||||||||||    
T  17155868 gtgctcctcctcaaggtctcaggtttgattctctgtgctgccaatttgagtgggctaatttaacttcttc 17155937  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 21589287 - 21589380
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||| | ||||||| ||||||||| ||||| ||||   ||| |||| |||||  | |||||||||||||||  |||||||||||||||    
T  21589287 gaacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaattt 21589380  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 43230852 - 43230736
Alignment:
Q  12 aacccacttagattggcctagtggtat--tgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt-gagg 108  Q
    ||||||||| | |||||||||||||||  || |||||   || | |||||||||||||||||| |||||| ||| ||| ||||| ||| |||||| || |    
T  43230852 aacccacttgggttggcctagtggtatattggcttgggttctgagagtgtgctcctccttaagatctcagattcaattctctcttgtgtcaatttagatg 43230753  T
Q  109 ggttagtttaacttctt 125  Q
     ||||||||||||||||    
T  43230752 agttagtttaacttctt 43230736  T

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Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 6844729 - 6844821
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||  |||||||||||||||||  |   |||||| |||||||  |||||| |||||||||| ||||| ||||||||||    
T  6844729 aacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaattt 6844821  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 22737082 - 22737157
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | |||| |||||||||||| ||||| || |  ||||||||||||||  || |||||||||||||||    
T  22737082 aacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgatt 22737157  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 25979213 - 25979284
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    ||||| |||||||| |||||||||||||||||| |||||  || |||||||| ||||||| |||| ||||||    
T  25979213 agtgttctcctcctcaaggtctcaggttcgattctctcttatgtcaatttgatggggttaatttagcttctt 25979284  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 30109384 - 30109309
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | ||||| | ||||||||| ||||  ||||   ||||||||||||||| |||||||||||||||||    
T  30109384 aacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgatt 30109309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 30735146 - 30735029
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctcctt---aaggtctcaggttcgattttctctggtgccaatttga-g 107  Q
    ||||||||| | ||| |||||| ||||||||||| ||||| | ||||||||||||||    ||  ||||| ||||||||  ||||| || |||||||| |    
T  30735146 aacccacttgggttgacctagtcgtattgacttgtaacctgagagtgtgctcctcctcctcaaaatctcaagttcgattacctctgatgtcaatttgagg 30735047  T
Q  108 gggttagtttaacttctt 125  Q
    ||||||||||| ||||||    
T  30735046 gggttagtttagcttctt 30735029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 30883274 - 30883203
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttc 83  Q
    ||||||||| | |||| |||||||||||| ||||| ||||   |||||||||||||| ||||||||| ||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttc 30883203  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 41730554 - 41730637
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    |||||||||||||||||| ||||||| |   |||||||||| ||| ||||| ||| |||||||| ||||| |||  ||||||||    
T  41730554 ttggcctagtggtattgagttggaacattggagtgtgctccacctcaaggtatcatgttcgattctctctcgtgttaatttgag 41730637  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 16436630 - 16436695
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttc 90  Q
    ||||||||||||||||| ||||| | ||   |||||||||||||| ||||||||| |||||||||||    
T  16436630 ttggcctagtggtattggcttggga-cttggagtgtgctcctcctcaaggtctcatgttcgattttc 16436695  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 3315258 - 3315307
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||| ||||||||| |||||||||||||||||| || | |||||||||||    
T  3315258 agtgcgctcctcctcaaggtctcaggttcgattctcccaggtgccaattt 3315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 21086757 - 21086806
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||| ||| |||||| ||||||| ||||||||| ||||||    
T  21086757 agtgtgctcctcctcaagatctcagattcgattatctctggtgtcaattt 21086806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 25586983 - 25587016
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||||||| |||||||||||||||    
T  25586983 aggtctcaggttcgatttcctctggtgccaattt 25587016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 29173533 - 29173582
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||  |||| |||||||||||| ||||||||| ||||||    
T  29173533 agtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaattt 29173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 3584718 - 3584686
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||||||||||||||||||||| ||||    
T  3584718 agtgtgctcctccttaaggtctcaggtttgatt 3584686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30000175 - 30000231
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    ||||||||||||||| | |||||| ||||||||| || |||||| ||||||||||||    
T  30000175 aggtctcaggttcgactctctctgatgccaatttaagtgggttaatttaacttcttc 30000231  T

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Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 26459486 - 26459371
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-agggg 110  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaagggg 26459387  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  26459386 ttagtttagcttcttc 26459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 39631844 - 39631959
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   |||  ||||||||| |||||||||||||||||| ||||| |||||||||||| ||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgaggggg 39631943  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  39631944 ttagtttagcttcttc 39631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 43215184 - 43215298
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | |||| |||||||||||| ||||| ||||   |||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgaggggg 43215283  T
Q  111 ttagtttaacttctt 125  Q
    |||||||| ||||||    
T  43215284 ttagtttagcttctt 43215298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 21558151 - 21558220
Alignment:
Q  35 gtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  21558151 gtattgacttggaacctaagaatgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 21558220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 2962471 - 2962574
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggg-gttagtttaactt 122  Q
    |||| ||||||||||||  |||||||||   |||||||||||||| ||| |||||||||||||| |||||||  |||||||||||| |||||||||||||    
T  2962471 ttggtctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctggaaccaatttgagggagttagtttaactt 2962570  T
Q  123 cttc 126  Q
    ||||    
T  2962571 cttc 2962574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 18363739 - 18363810
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttcttc 126  Q
    |||||||||||||| ||||||||||||| |||| ||||| || ||||||||||||||||||||| |||||||    
T  18363739 agtgtgctcctcctcaaggtctcaggtttgattctctctagtaccaatttgaggggttagtttagcttcttc 18363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 33222387 - 33222477
Alignment:
Q  29 ctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagttta 118  Q
    |||||||||||| ||||| ||||  |||||| ||| |||| |||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  33222387 ctagtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaatttgagagggttagttta 33222477  T

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Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 33869521 - 33869423
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||| | |||||||||| |||||| ||||  ||||  |||||||||||| || |||||||| ||||||||| ||||||||| ||||||||||||    
T  33869521 aacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctggtgtcaatttgagggg 33869423  T

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Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 25655286 - 25655189
Alignment:
Q  30 tagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-aggggttagtttaacttcttc 126  Q
    ||||||||||||||||| | ||   |||||| ||||||| ||||| |||||||||||| ||||||||||||||||| ||||||| ||||| |||||||    
T  25655286 tagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaatttgaaggggttggtttagcttcttc 25655189  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 21570065 - 21569997
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaactt 122  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  21570065 agtgcgctcctcctcaaggtctcaagttcgattttctctggtgtcaatttgagggggttagtttaactt 21569997  T

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Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 23552118 - 23552210
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||||||| ||||||||||| ||||   |||||||||||||| ||||||||| |||||||| |||||  |||||||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaattt 23552210  T

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Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 29785335 - 29785263
Alignment:
Q  54 aagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    ||||||||||||||| ||||||||| |||||||| | |||||||||||||||| |||||||||||| ||||||    
T  29785335 aagtgtgctcctcctcaaggtctcatgttcgattctttctggtgccaatttgagggggttagtttagcttctt 29785263  T

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Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 30579335 - 30579427
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||| ||||||||| ||||  ||||   ||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaattt 30579427  T

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Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 5273667 - 5273552
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gg 109  Q
    |||||||||| | ||||||| ||||| ||| ||||| |||| | |||||||||||||| ||||||| ||||| |||| |||| |||||||||||| | ||    
T  5273667 gaacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaatttgggtgg 5273568  T
Q  110 gttagtttaacttctt 125  Q
    | ||||||| ||||||    
T  5273567 gctagtttagcttctt 5273552  T

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Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 17113795 - 17113910
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| |  ||||||||| |||||| ||| ||||||   |||||||| ||||| ||||||||| |||||||| |||||| ||| ||||||| ||||    
T  17113795 aacccacttggggtggcctagttgtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaatttgaggggg 17113894  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  17113895 ttagtttagcttcttc 17113910  T

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Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 22760863 - 22760958
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||| | |||| || ||||||||||||||| ||||   |||||||||||||| |||||||||||||||||| || | | ||||||||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaatttgag 22760958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 21877820 - 21877922
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaactt 122  Q
    ||||||||||||||||||||||| ||||   || ||||||||||||||||||||| |||||||| ||   |||||||| ||||| ||| || ||||||||    
T  21877820 ttggcctagtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgattctccacggtgccaaattgagtgggctaatttaactt 21877919  T
Q  123 ctt 125  Q
    |||    
T  21877920 ctt 21877922  T

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Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 15137553 - 15137646
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||| |||||| |||||||| |  ||  |||||||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttg 15137646  T

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Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 17041088 - 17040995
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | |||| ||||||| |||| ||||| | ||  ||||||||||||||| |||||||||||||||||| ||||  |||||||||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttg 17040995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 14058265 - 14058333
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    ||||||| ||||||||| |||||||||| | ||||||||| |||| |||||||||||||||||| ||||    
T  14058265 ttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

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Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 14368293 - 14368361
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    ||||||| ||||||||| |||||||||| | ||||||||| |||| |||||||||||||||||| ||||    
T  14368293 ttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

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Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 37162383 - 37162312
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg-ttagtttaacttctt 125  Q
    |||||||| || || ||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||    
T  37162383 agtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaatttgaggggattagtttagcttctt 37162312  T

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Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 41519328 - 41519258
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctg 94  Q
    ||||||||||||||||||||||| |  ||  |||||||||||||| ||||||||||||||| || ||||||    
T  41519328 ttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

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Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 4566501 - 4566412
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||| | ||||||||||||||||||||| | ||||   |||||  |||| || ||||||||||||| |||| ||||||||||||||||    
T  4566501 ccacttgggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctggtgccaattt 4566412  T

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Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 7801180 - 7801253
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcga 85  Q
    ||||||||| | ||||||| ||||||||||||||| ||||   |||||||||||| | ||||||||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 31835235 - 31835284
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||| |||||||||||||||||| || |||||||||||||    
T  31835235 agtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattt 31835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 47824656 - 47824563
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttctt 125  Q
    ||||||||||||||  |||   ||||||||||||||| || |||||| |||||||| |||| |||| ||||||||| ||||| |||| ||||||    
T  47824656 gtggtattgacttgagaccatgaagtgtgctcctcctcaaagtctcatgttcgattgtctccggtgtcaatttgagtggttaatttagcttctt 47824563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 7744186 - 7744090
Alignment:
Q  14 cccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||| ||||||||||||||| | ||| | | ||   | | |||||||||| ||||||||||||| |||| |||||||||| |||||||||||    
T  7744186 cccacttaggttggcctagtggtataggcttaggatctgggactatgctcctcctcaaggtctcaggtttgattctctctggtgcaaatttgagggg 7744090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 25132455 - 25132379
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||||  || |||  ||||||||||||| | |||||  ||||||||||| |||||||||||||||||||||    
T  25132455 gaacccacttaagttagcccggtggtattgacttaggacctaggagtgtgctccttcttaaggtctcaggttcgatt 25132379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 38374675 - 38374583
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||| | ||||| ||| ||||| |||| | |||||||||||||| ||||||| |||||||||| || | |||||||||||    
T  38374675 aacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaattt 38374583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 39499796 - 39499720
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||| | ||||||||||||||||| ||||| ||||   |||||| ||||| ||||||||||| ||||||||    
T  39499796 gaacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgatt 39499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 23301678 - 23301583
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||| | ||||||| ||||||||||||||| || |   ||||||||||||||| |||||||| ||| |||| ||| | |||| ||||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgag 23301583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 279987 - 279937
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||| ||||||||||||||||||||||| ||| |||| ||||||||||||    
T  279987 agtgtactcctccttaaggtctcaggttcaattctctccggtgccaatttg 279937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 5672645 - 5672531
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| |||||| ||||| ||||| | |||| ||||  ||||||| || |||| ||||||||| |||||||| ||| | ||  |||||||| ||||    
T  5672645 aacccacttggattggtctagttgtatttatttggtacctggaagtgtgttcttcctcaaggtctcaagttcgattctctttagtctcaatttgaggggg 5672546  T
Q  111 ttagtttaacttctt 125  Q
    || ||||||||||||    
T  5672545 ttggtttaacttctt 5672531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 5697697 - 5697583
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| |||||| ||||| ||||| | |||| ||||  ||||||| || |||| ||||||||| |||||||| ||| | ||  |||||||| ||||    
T  5697697 aacccacttggattggtctagttgtatttatttggtacctggaagtgtgttcttcctcaaggtctcaagttcgattctctttagtctcaatttgaggggg 5697598  T
Q  111 ttagtttaacttctt 125  Q
    || ||||||||||||    
T  5697597 ttggtttaacttctt 5697583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 9183224 - 9183174
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| || ||||||||||||||| ||||||||| |||||||    
T  9183224 agtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttg 9183174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 23945861 - 23945935
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgat 86  Q
    ||||||||| | ||| |||| |||||||||||| |||||| | | |||||||||| || ||||||||||||||||    
T  23945861 aacccacttgggttgacctaatggtattgacttagaacctgagaatgtgctcctcattgaggtctcaggttcgat 23945935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 29385776 - 29385726
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| ||||||||||||| |||| ||| |||||||||||||    
T  29385776 agtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttg 29385726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 2882993 - 2883042
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  2882993 agtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaattt 2883042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 11700179 - 11700259
Alignment:
Q  26 ggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    |||||||||| |||| ||||  || | | ||| |||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  11700179 ggcctagtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctctct-gtgccaatttgag 11700259  T

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Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 27255333 - 27255446
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| |||||||  | || |||||||||||||  |  |||| | ||||| || || |||||||||| ||||||||||| || ||| |||| ||||    
T  27255333 aacccacttggattggctcaatgatattgacttggaatttggaagtatactccttctcaaagtctcaggtttgattttctctgatgtcaaattgaggggg 27255432  T
Q  111 ttagtttaacttct 124  Q
    ||||||||||||||    
T  27255433 ttagtttaacttct 27255446  T

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Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 9608662 - 9608590
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagg-ggttagtttaacttcttc 126  Q
    ||||| |||||||| ||| |||||||||||||| ||||| ||| |||||||||| |||| ||||| |||||||    
T  9608662 agtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc 9608590  T

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Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 9836234 - 9836162
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagg-ggttagtttaacttcttc 126  Q
    ||||| |||||||| ||| |||||||||||||| ||||| ||| |||||||||| |||| ||||| |||||||    
T  9836234 agtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc 9836162  T

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Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 13106815 - 13106763
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||| |||||||| |||||||||||||||||| |||||| ||| ||||||||    
T  13106815 agtgtactcctcctcaaggtctcaggttcgattctctctgatgctaatttgag 13106763  T

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Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 45709772 - 45709704
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    ||||||||||||||||  ||||| | || | ||||||||||||||  ||||||||||||||||| ||||    
T  45709772 ttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctc 45709704  T

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Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 43590919 - 43590998
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatt 103  Q
    ||||||| ||||||||| ||||| || |   |||||||||||||| || ||||||||||||||| || || |||||||||    
T  43590919 ttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 43590998  T

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Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 45976996 - 45976885
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggtta 113  Q
    |||||| | ||||||||||||||||| ||||  ||||   |||||||||||||||||||| | | ||||  || |||||| ||||||||| ||  |||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggttttaagttcatttatctctgatgccaatttaagtaggtta 45976897  T
Q  114 gtttaacttctt 125  Q
     |||||||||||    
T  45976896 atttaacttctt 45976885  T

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Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 48771938 - 48772013
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | ||||| | ||||||||| ||||| | ||   ||||||||||||||| |||||||||||||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

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Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 18056808 - 18056758
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| |||||||||||||||||| || | ||||| ||||||    
T  18056808 agtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaatttg 18056758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 21570118 - 21570076
Alignment:
Q  81 ttcgattttctctggtgccaatttga-ggggttagtttaactt 122  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  21570118 ttcgattttctctggtgtcaatttgagggggttagtttaactt 21570076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 25021411 - 25021345
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctca 78  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   |||||||||||||| || ||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

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Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 29916859 - 29916809
Alignment:
Q  37 attgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||| ||| | |||| |||||||||||||| ||||||||||||||||||    
T  29916859 attgacgtgggatctaagagtgtgctcctcctcaaggtctcaggttcgatt 29916809  T

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Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 41519183 - 41519093
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||| | ||||||||||| || || ||||| |  ||| ||||||||||| || |||||||||| ||||||| |||| |||| |||||||    
T  41519183 ccactttggttggcctagtgatactggcttgggatttaagagtgtgctccttctcaaggtctcagattcgattatctccggtgtcaatttg 41519093  T

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Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 48125252 - 48125159
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||| | |||| || ||||| ||| ||||| ||||   |||||||||||||  |||||||||||||| |||||| | |||||||||||    
T  48125252 tgaacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctccg-aaggtctcaggttcaattttccccggtgccaattt 48125159  T

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Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 48716280 - 48716346
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctca 78  Q
    ||||||||||  ||||| |||| |||||||||||||| ||   |||||| |||||||||||||||||    
T  48716280 aacccacttaagttggcttagtagtattgacttggaatctgggagtgtgttcctccttaaggtctca 48716346  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 5579310 - 5579217
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||| ||| ||||| ||| ||||| ||||   |||||||||||||| ||||||||||||| || | || | ||||||||||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttg 5579217  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 11721024 - 11720943
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||| ||||||||| ||||| ||||   | |||||||||||||||||| |||| ||||||| || |  |||||||||||    
T  11721024 ttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttg 11720943  T

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Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 22927477 - 22927550
Alignment:
Q  13 acccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgat 86  Q
    |||||||| | |||||||||||||||| |||||| | |||  |||||||| ||||| ||||||||  |||||||    
T  22927477 acccacttgggttggcctagtggtattaacttgggatctaggagtgtgcttctcctaaaggtctccagttcgat 22927550  T

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Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 27266759 - 27266872
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| ||||| | ||||  |||||||||||||  | ||||| ||||| | || ||  ||||||||| |||| |||||| || ||| |||| ||||    
T  27266759 aacccacttggattgacttagtaatattgacttggaatttgaaagtatgctcattctcaaaatctcaggtttgattctctctgatgtcaaattgaggggg 27266858  T
Q  111 ttagtttaacttct 124  Q
    ||||||||||||||    
T  27266859 ttagtttaacttct 27266872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 41907659 - 41907626
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaattt 41907626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 42262145 - 42262056
Alignment:
Q  38 ttgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgcc-aatttgaggggttagtttaacttcttc 126  Q
    ||||||||| | || | |||||||||||||| |||||||||| ||| ||| ||||| ||||| |||| || |||||| |||| |||||||    
T  42262145 ttgacttgggatctgagagtgtgctcctcctaaaggtctcagattcaattctctcttgtgccaaattggatgggttaatttaccttcttc 42262056  T

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Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 42836077 - 42836008
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggt 81  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   ||||||||| |||| |||| |||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcaggt 42836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 49050524 - 49050475
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||| ||||||||| ||||||||||||||||| || | |||||||||||    
T  49050524 agtgtactcctccttgaggtctcaggttcgattctccccggtgccaattt 49050475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 15905746 - 15905675
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||| | ||||||| | ||||||| ||||| ||||   ||||||||||||||| |||||||||||||||||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctt-aggtctcaggttcgatt 15905675  T

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Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 25590654 - 25590706
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||||||||||||  ||||||| |||||||||||||  |||| |||||||||    
T  25590654 agtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgag 25590706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 33700847 - 33700735
Alignment:
Q  14 cccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggtt 112  Q
    ||||||| | ||||||||||||||||| ||||||| ||   |||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggtt 33700748  T
Q  113 agtttaacttctt 125  Q
    |||||||||||||    
T  33700747 agtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 36371470 - 36371584
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||||||||||||||| ||||||||||   |||||||||||||| ||||||| |||||||||| |||||| ||||||||||| ||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgaggggg 36371569  T
Q  111 ttagtttaacttctt 125  Q
    |||||||| ||||||    
T  36371570 ttagtttagcttctt 36371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 4566548 - 4566662
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||| | ||||||||||| ||||| ||||||||||   |||||||||||||| | |||||||||||||||| |||||| || |||||| ||||||    
T  4566548 aacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtcaatttaaggggt 4566647  T
Q  112 tagtttaacttcttc 126  Q
    ||||||| |||||||    
T  4566648 tagtttagcttcttc 4566662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 8904414 - 8904526
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | |||||||||| |||||||||||| |  |   |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgaggggg 8904513  T
Q  111 ttagtttaacttc 123  Q
    |||||||||||||    
T  8904514 ttagtttaacttc 8904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 50919972 - 50920068
Alignment:
Q  30 tagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-aggggttagtttaacttctt 125  Q
    |||||||||||||||| ||||| | ||||||||| |||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||| ||||||    
T  50919972 tagtggtattgacttgaaacctgagagtgtgctcatccttaaggtttcaggttcgattctctctggtgtcaatttgaaggggttagtttagcttctt 50920068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 2799862 - 2799977
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||||||||||||| | ||||  | ||   |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  2799862 aacccacttcgcttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaggggg 2799961  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  2799962 ttagtttagcttcttc 2799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 8177246 - 8177143
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaactt 122  Q
    ||||||||||||||||| ||||| | ||   |||||||||||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||| |||    
T  8177246 ttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagctt 8177147  T
Q  123 cttc 126  Q
    ||||    
T  8177146 cttc 8177143  T

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Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 9165271 - 9165173
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   |||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttgagggg 9165173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 11063573 - 11063671
Alignment:
Q  29 ctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-aggggttagtttaacttcttc 126  Q
    |||||||||||| ||||| |||| |||||||| ||||||| ||||||| |||||||||| ||||| ||||||||||| ||||||||||||| |||||||    
T  11063573 ctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctctagtgccaatttgaaggggttagtttagcttcttc 11063671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 15786353 - 15786286
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaactt 122  Q
    |||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  15786353 agtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaatttgaggggttagtttaactt 15786286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 3265948 - 3266030
Alignment:
Q  36 tattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagttta 118  Q
    |||||||||||||| |   |||||||||||||| |||||||||||||||||| |||||||| ||||||||||  |||||||||    
T  3265948 tattgacttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggttccaatttgagatgttagttta 3266030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 37400270 - 37400367
Alignment:
Q  8 tttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||| |||| | |||| || ||||||||| ||||  |||| |||||||||||||||||||||||||| |||||||| | || ||||||||||||    
T  37400270 tttgaaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttg 37400367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 51814494 - 51814587
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | |||||||  |||||||||||||  | || | |||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttg 51814587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 52336838 - 52336757
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||||| ||||| | ||   |||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  52336838 ttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttg 52336757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 12993895 - 12993987
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| |||||||||||||||||||  |  || |||||| || || || ||||||||||||||| |||||||||| |||||    
T  12993895 aacccacttagattggcttagtggtattgacttggaattttgaaatgtgcttcttctcaaagtctcaggttcgattatctctggtgctaattt 12993987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 34460973 - 34460893
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||| ||||||||||||||||  ||||||||||||| ||||||| |||||||||| ||| ||| |||||||| |||||||    
T  34460973 ttggcttagtggtattgacttgagacctaaaagtgtgttcctcctgaaggtctcagattcaattatctctggttccaattt 34460893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 40810510 - 40810582
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    |||||| ||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  40810510 agtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaatttgagagggttagtttagcttcttc 40810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 1247125 - 1247227
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-aggggttagtttaactt 122  Q
    ||||| |||||||| ||| ||| |||||   ||||| |||||||| |||||||||||||||||| |||||||| |||||||| |||||||| |||| |||    
T  1247125 ttggcttagtggtactgatttgaaacctgggagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaatttgaaggggttattttagctt 1247224  T
Q  123 ctt 125  Q
    |||    
T  1247225 ctt 1247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 17745320 - 17745218
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttc 123  Q
    ||||||||||||||||| ||||| |||| |  |||||||||||||  |||||||| |||||||| ||||||||| ||||||  | ||||| |||| ||||    
T  17745320 ttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttaggtggttaatttagcttc 17745221  T
Q  124 ttc 126  Q
    |||    
T  17745220 ttc 17745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 30420310 - 30420423
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggt 111  Q
    ||||||||||| |||||| |||||| ||| ||||| |  ||  |||||||||||||| ||  |||||||||||| | |||| | |||||||||||||||     
T  30420310 aacccacttaggttggccaagtggttttggcttgggatataggagtgtgctcctcctcaacatctcaggttcgaatctctcggttgccaatttgagggga 30420409  T
Q  112 tagtttaacttctt 125  Q
    ||||||| ||||||    
T  30420410 tagtttagcttctt 30420423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 35699964 - 35700052
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctca--ggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||||||||||||||||||| ||  ||||||||| || || |||||||||  ||||||||| ||||||||| |||||| |||||    
T  35699964 ttggcctagtggtattgacttggaaactggaagtgtgcttctgctcaaggtctcaggggttcgattctctctggtgtcaatttaagggg 35700052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 29753700 - 29753764
Alignment:
Q  63 cctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  29753700 cctcctcaaggtctcaggttcgattctctctggtgccaatttaagagggttagtttagcttcttc 29753764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 19528403 - 19528328
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | ||||||| ||||||||| ||||| | |||  |||||||||||||| ||||||||||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgatt 19528328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 2219971 - 2220052
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    |||||||||| | |||  || ||||||||| |||||||||| |||||||||| |||||  ||||||||||||||||| ||||    
T  2219971 gaacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctc 2220052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 19940905 - 19940856
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  19940905 agtgtgctcctccttaaggtctcaggtttgattctctccggtgccaattt 19940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 27567174 - 27567117
Alignment:
Q  36 tattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctct 93  Q
    |||||||||||||||| | |||||||||||| | |||||||||| |||||||||||||    
T  27567174 tattgacttggaacctgagagtgtgctcctcttcaaggtctcagattcgattttctct 27567117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 31605924 - 31605831
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||  |||||||  |||| ||| ||||| ||||  ||||||||||||||| ||||||||| |||||||| || | ||||||||||||    
T  31605924 aacccacttatgttggcctgatggtgttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttg 31605831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 6650595 - 6650687
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||| |||| ||||||||||||||||| ||||| | |    ||| |||||||||| || ||||||||||||||| ||||||||| ||||||    
T  6650595 aacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaattt 6650687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 21547544 - 21547441
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt-gaggggttagtttaactt 122  Q
    ||||||||||||||||| ||||| || |   || |||||||||||  |||| |||||||||||| |||||| ||||||||| |  ||| |||||||||||    
T  21547544 ttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtgggctagtttaactt 21547445  T
Q  123 cttc 126  Q
    ||||    
T  21547444 cttc 21547441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 28411343 - 28411422
Alignment:
Q  25 tggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||| ||||||||||||||| |  | | |||||||||||| || ||||||||| ||| ||| ||||||||||||||||    
T  28411343 tggcctggtggtattgacttgggatatgagagtgtgctcctctttgaggtctcagattcaattctctctggtgccaattt 28411422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 31794346 - 31794247
Alignment:
Q  6 cctttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||| |||||||||| | ||||||||||||||||| ||||| || |   |||||||||||||| |||||||   ||||||||  |||||||| |||||||    
T  31794346 ccttggaacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttg 31794247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 1600325 - 1600275
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||||| || |||||||||||| ||||||||| |||||||    
T  1600325 agtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttg 1600275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 42787208 - 42787302
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    |||||| |||| ||||||||||||||||||||||| || | | |||| | ||||||| || ||||||| ||||| | ||||| ||| ||||||||    
T  42787208 aacccagttaggttggcctagtggtattgacttgggacttgagagtgcgttcctcctcaaagtctcagattcgagtctctctagtgtcaatttga 42787302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 51281382 - 51281444
Alignment:
Q  43 ttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||| |||| |||||||||||||||| ||||||||||||| |||| |||| || |||||||||    
T  51281382 ttgggacctcaaagtgtgctcctcctcaaggtctcaggtttgattctctccggcgccaatttg 51281444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 27127386 - 27127337
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||| ||||||||||| |||||| ||||||||||||||||| ||||||    
T  27127386 agtgtgttcctccttaagctctcagattcgattttctctggtgtcaattt 27127337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 31383854 - 31383781
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| ||||| ||||   |||||||||||||||  |||||||||||||||| |||  ||||||||||||    
T  31383854 gtggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctcttaggtgccaatttg 31383781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 16893437 - 16893489
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    ||||| ||||||||  |||||||||||||||||||||| |||| |||||||||    
T  16893437 agtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgag 16893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 32524378 - 32524438
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagttta 118  Q
    |||||||| | ||| ||||| |||||||| |||||||||||||||||| ||||||||||||    
T  32524378 tgctcctcttcaagatctcaagttcgattctctctggtgccaatttgagggggttagttta 32524438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 43446006 - 43446058
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    |||||||||||||| ||||||||| |||||||| || | ||||||||||||||    
T  43446006 agtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgag 43446058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 51703791 - 51703863
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggt 96  Q
    |||| |||||||||||| ||||||| ||   |||||||||||||| || || |||||||||||| ||||||||    
T  51703791 ttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctggt 51703863  T

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Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 1094546 - 1094617
Alignment:
Q  33 tggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||||||||   |||||||||||||   ||||||||  ||||||| |||| |||||||||||    
T  1094546 tggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaattt 1094617  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 3679323 - 3679276
Alignment:
Q  79 ggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  3679323 ggttcgattctctctggtgccaatttgagggggttagtttagcttctt 3679276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 14787396 - 14787297
Alignment:
Q  28 cctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    ||||||||||||||||||  |||| | |||||| | ||||| ||||| |||||||||||| |||||  |  |||||| || ||||||||||| |||||||    
T  14787396 cctagtggtattgacttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctctaatatcaatttaagtgggttagtttagcttcttc 14787297  T

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Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 16170054 - 16169979
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| | || |||| ||||||||||||||| ||||   |||||| ||||||| ||||| ||||||||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgatt 16169979  T

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Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 35187931 - 35187978
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaa 71  Q
    |||||||||||||||||||||||||| | | ||||||||| |||||||    
T  35187931 ttggcctagtggtattgacttggaacttgagagtgtgctcttccttaa 35187978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 44126396 - 44126487
Alignment:
Q  13 acccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||| | ||||||| ||||||||||| ||| ||||   |||||||||||||   ||||||||| || |||| ||||| ||||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaattt 44126487  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 52029993 - 52029938
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||||||||  |||||  ||||||||||| || ||||||||||||||||||    
T  52029993 gtggtattgacttgagacctaggagtgtgctccttctcaaggtctcaggttcgatt 52029938  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 6122837 - 6122887
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| ||||||||||||||||||  |||| ||| |||||||    
T  6122837 agtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttg 6122887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 36124853 - 36124899
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctca 78  Q
    ||||||||||||||| |||| | ||||||||||||||| ||||||||    
T  36124853 gtggtattgacttgggacctgagagtgtgctcctccttgaggtctca 36124899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 44961808 - 44961858
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| | |||||||||||||||| ||||| ||| |||||||    
T  44961808 agtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttg 44961858  T

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Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 45266881 - 45266927
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||| |||||||||||||||||| || | ||||||||||||    
T  45266881 tgctcctcctcaaggtctcaggttcgattctccccggtgccaatttg 45266927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 8077698 - 8077731
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  8077698 aggtctcaggttcgattctctctggtgccaattt 8077731  T

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Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 9117161 - 9117194
Alignment:
Q  54 aagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||||||||| |||||||||||||||||    
T  9117161 aagtgtgctcctccttgaggtctcaggttcgatt 9117194  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 9500501 - 9500468
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  9500501 aggtctcaggttcgattctctctggtgccaattt 9500468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 15059548 - 15059515
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  15059548 aggtctcaggttcgattctctctggtgccaattt 15059515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 18646904 - 18646937
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  18646904 aggtctcaggttcgattctctctggtgccaattt 18646937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 21392866 - 21392911
Alignment:
Q  41 acttggaacctaaaagtgtgctcctccttaaggtctcaggttcgat 86  Q
    |||||| || ||| |||||||||||||| |||||||||||||||||    
T  21392866 acttgggacttaagagtgtgctcctcctcaaggtctcaggttcgat 21392911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 7219994 - 7219902
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||| |||| ||||| || |||||||||||| ||| || | | ||||||||||||||  | ||||||||||||||| ||| || | |||||||    
T  7219994 aacctactttgattgacccagtggtattgacctgggacatgagagtgtgctcctcctcgaagtctcaggttcgattctctttgataccaattt 7219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 38947505 - 38947473
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||||||| ||||||||||||||||||    
T  38947505 agtgtgctcctcctcaaggtctcaggttcgatt 38947473  T

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Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 37109427 - 37109320
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaggggg 37109328  T
Q  111 ttagttta 118  Q
    ||||||||    
T  37109327 ttagttta 37109320  T

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Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 7292871 - 7292759
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggtta 113  Q
    |||||| | |||| |||||||||||| ||||||||||   |||||||||||||| || ||||||||||||||| ||||| |||||||||||| |||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggtta 7292772  T
Q  114 gtttaacttcttc 126  Q
    ||||| |||||||    
T  7292771 gtttagcttcttc 7292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 15180741 - 15180853
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    |||||||||||||||| |||||||||||| ||||| ||||   ||||| ||||||   ||||||| |||||||||| |||||||||||||||||| ||||    
T  15180741 aacccacttagattggtctagtggtattggcttgggacctgggagtgtactcctc---aaggtcttaggttcgattctctctggtgccaatttgaggggg 15180837  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  15180838 ttagtttagcttcttc 15180853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 16581711 - 16581808
Alignment:
Q  30 tagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    ||||||||||| ||||||||||   ||| |||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||    
T  16581711 tagtggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaatttgagagggttagtttagcttcttc 16581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 7539588 - 7539704
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggg 109  Q
    |||||||| ||||||||| ||||||||||||| || | | ||   ||| ||||||| || |||||||||||||||||| |||||  || |||||||||||    
T  7539588 tgaacccatttagattggtctagtggtattgattttggatctgggagtatgctccttctcaaggtctcaggttcgattctctcttctgtcaatttgaggg 7539687  T
Q  110 gttagtttaacttcttc 126  Q
    |||||||||||||||||    
T  7539688 gttagtttaacttcttc 7539704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 38869783 - 38869883
Alignment:
Q  27 gcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    |||||||||||||| ||||| | ||   |||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttctt 38869882  T
Q  126 c 126  Q
    |    
T  38869883 c 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 4249177 - 4249292
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||||||||||||| | ||||| |  |   |||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||    
T  4249177 aacccacttcgcttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgaggggg 4249276  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  4249277 ttagtttagcttcttc 4249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 19680864 - 19680750
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagg-gg 110  Q
    ||||||||| ||||||||||||||||||  ||||| || |   ||||||||| |||| ||||||| |||||||||| |||||||||||||||| ||| ||    
T  19680864 aacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaatttaaggagg 19680765  T
Q  111 ttagtttaacttctt 125  Q
    |||||||| ||||||    
T  19680764 ttagtttagcttctt 19680750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 1730565 - 1730450
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg- 110  Q
    ||||||||| | ||| ||||||||||||| ||||| |||| | |||||||||||| | || ||||||| ||| ||| |||||||||| |||||||||||     
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctggtgctaatttgagggga 1730466  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  1730465 ttagtttagcttcttc 1730450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 2185096 - 2184994
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaactt 122  Q
    |||||||||||||| || ||||||||||   ||||||||||| || || ||||||||||||||| |||| | ||||||||||| |||||||||||| |||    
T  2185096 ttggcctagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggggttagtttagctt 2184997  T
Q  123 ctt 125  Q
    |||    
T  2184996 ctt 2184994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 23377974 - 23378071
Alignment:
Q  30 tagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    ||||| ||||| ||||| ||||   |||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||| ||||||| |||||||    
T  23377974 tagtgttattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 7949530 - 7949438
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| |  |||||||| ||||||| ||||| ||||   |||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 7949438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 24991574 - 24991642
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggg-gttagtttaacttcttc 126  Q
    |||||||||| |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||    
T  24991574 tgctcctcctcaaggtctcaggttcgattttctctagtactaatttgagggagttagtttaacttcttc 24991642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 46545711 - 46545803
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||||||||||||| ||||  |||| | |||||||||||||| ||| |||||| |||||||||||||| || ||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctgatgtcaattt 46545803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 31759734 - 31759619
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-agggg 110  Q
    ||||||||| | |||  |||||||||||| ||||| || |   |||||||||||||| |||||||||| ||||||| | |||||| |||||||| ||||     
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctggtaccaatttgaaggga 31759635  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  31759634 ttagtttagcttcttc 31759619  T

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Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 33632165 - 33632098
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    |||||||||| |||||| |||| |||||| ||||||||| |||||||| |||||||||||||||||||    
T  33632165 tgctcctcctcaaggtcccaggatcgattctctctggtgtcaatttgagggggttagtttaacttctt 33632098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 44195041 - 44194946
Alignment:
Q  31 agtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggg-gttagtttaacttctt 125  Q
    ||||||||||  |||||| ||  ||||||| | || || ||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  44195041 agtggtattggtttggaatctggaagtgtgtttcttctcaaggtctcatgttcaattctctctggtgccaatttgagggagttagtttaacttctt 44194946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 47044717 - 47044792
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| ||||||||| ||||||||||||||| | || | ||| ||||||||||  |||||||||||||||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgatt 47044792  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 10047997 - 10048083
Alignment:
Q  29 ctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-aggggttag 114  Q
    |||||||||||| ||||| |||||| ||| ||||||| || | |||||||||||||||| |||||| ||| |||||| |||||||||    
T  10047997 ctagtggtattggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctctctgatgctaatttgaaggggttag 10048083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 11592209 - 11592115
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttctt 125  Q
    ||||||||| ||||| |||| | ||||||||||||||  |||||| |||||||||| |||||||  ||||||||||  ||||| |||||||||||    
T  11592209 gtggtattgccttgggacctgagagtgtgctcctcctccaggtcttaggttcgattatctctggaaccaatttgagttggttaatttaacttctt 11592115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 27372688 - 27372618
Alignment:
Q  57 tgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-aggggttagtttaacttcttc 126  Q
    |||||||||| ||||||||| |||||||||| |||||| |||||||||| |||||||| |||| |||||||    
T  27372688 tgtgctcctctttaaggtcttaggttcgattatctctgatgccaatttgaaggggttaatttagcttcttc 27372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 51622528 - 51622578
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  51622528 agtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttg 51622578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 6666452 - 6666387
Alignment:
Q  62 tcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    ||||||| ||| |||||||||||||| ||||||||||| |||||| |||||||||||| |||||||    
T  6666452 tcctcctcaagatctcaggttcgattctctctggtgcccatttgagggggttagtttagcttcttc 6666387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 13265172 - 13265071
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttc 123  Q
    ||||||||| ||||||| ||||| ||||   | |||||||||||||| ||| |||| ||||||| ||||| | |||||||| |||| |||||||| ||||    
T  13265172 ttggcctagaggtattggcttgggacctgggaatgtgctcctccttatggtttcagattcgattctctcttgagccaatttaagggattagtttagcttc 13265073  T
Q  124 tt 125  Q
    ||    
T  13265072 tt 13265071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 28635696 - 28635789
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||| ||| |||||| |||||||| | ||   ||||||||||||||  |||||| |||||||||| |||||||||||||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttg 28635789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 37274536 - 37274443
Alignment:
Q  12 aacccacttagattggcctagtggta-ttgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | |||||||||| ||| ||| ||||| ||||   |||||||||||||| ||||||| |||||||||| |||||||||| |||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaattt 37274443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 4923545 - 4923645
Alignment:
Q  7 ctttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    |||| |||| |||| | ||||||||||| |||||  ||||||| | ||||||||||| || | |||||||||| ||| ||| ||||| ||||||||||||    
T  4923545 ctttaaacctacttgggttggcctagtgttattggtttggaacttgaaagtgtgctcatcgtcaaggtctcagattcaattctctcttgtgccaatttga 4923644  T
Q  107 g 107  Q
    |    
T  4923645 g 4923645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 2622475 - 2622379
Alignment:
Q  12 aacccacttagattggcctagtggtattga----cttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | |||||||||||||||| |    ||||| ||||   ||||||||||||||  | ||||||||||||||| ||||||||||||||||    
T  2622475 aacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaattt 2622379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 8030282 - 8030187
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||| ||||| ||||||||||| | ||||| || |   |||||||||||||| ||||||||| ||||||||  |||| ||| |||||||    
T  8030282 tgaacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttg 8030187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 46295140 - 46295211
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttctt 125  Q
    |||||||||||||| |||||||||||||||||| || | |||||||||||| | ||| ||||||| ||||||    
T  46295140 agtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 20770955 - 20771025
Alignment:
Q  56 gtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttctt 125  Q
    ||||| |||| || ||||||||| |||||||| |||| ||||||||||||| ||||||| |||||||||||    
T  20770955 gtgtgttccttctcaaggtctcaagttcgattctctcaggtgccaatttgagggggttaatttaacttctt 20771025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 19532057 - 19531986
Alignment:
Q  33 tggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||| ||||| || ||  || ||||||||||||||| | |||||||||||| |||||| |||||||||    
T  19532057 tggtattggcttgggacataggagcgtgctcctccttaagttttcaggttcgattctctctgatgccaattt 19531986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 32662801 - 32662868
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttctt 125  Q
    ||||||||||| |||||||||||||||||||||  |||| |||||| || ||| || |||||||||||    
T  32662801 tgctcctccttgaggtctcaggttcgattttcttcggtgtcaatttaagtgggctaatttaacttctt 32662868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 2732043 - 2732109
Alignment:
Q  61 ctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttcttc 126  Q
    |||||||| || ||||||||||||||| |||| |||||||||||| | ||| ||||||| |||||||    
T  2732043 ctcctcctcaaagtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 51969060 - 51969110
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| ||||| ||||||||  || |||||||||||||||||    
T  51969060 agtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttg 51969110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 306374 - 306305
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctct 93  Q
    |||| ||||||||||||| |||| | || | |||||| ||||| |||| ||||||| |||||||||||||    
T  306374 ttggtctagtggtattgatttgggatctgagagtgtgatcctctttaaagtctcagattcgattttctct 306305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 5795485 - 5795392
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | |||| || ||||| ||||||||| ||||   ||| |||||||||| ||||||||||||| |||| || |  |||||||||||    
T  5795485 aacccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcaggtttgattctccccagtgccaatttg 5795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 9517787 - 9517754
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  9517787 aggtctcaggttcgattctctctggtgccaattt 9517754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 19229271 - 19229191
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||| ||||||||| | ||| || || || ||||||||||||  ||||||||||||||||| || ||||| ||||||||    
T  19229271 ttggcctggtggtattggcctgggacttagaa-tgtgctcctcctcgaggtctcaggttcgattctccctggtaccaatttg 19229191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 19238653 - 19238560
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||| ||||||||| ||||| || |   ||||||||||||||  ||||||| ||||||||| || | ||| ||||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttg 19238560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 34844904 - 34844871
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  34844904 aggtctcaggttcgattctctctggtgccaattt 34844871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 40058998 - 40058965
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  40058998 aggtctcaggttcgattctctctggtgccaattt 40058965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 41683752 - 41683841
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||| | ||| ||||||||||||| |||||||||| | ||||||||||| || || || ||| |||| ||| | ||| ||||||||||    
T  41683752 ccacttgggttgacctagtggtattggcttggaacctgagagtgtgctccttctcaaagtttcacgttcaattctttctagtgccaattt 41683841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 49287909 - 49287942
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  49287909 aggtctcaggttcgattctctctggtgccaattt 49287942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 49576927 - 49576890
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  49576927 agtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 51250598 - 51250505
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||| ||||||||| ||||| | ||   |||||||||| ||| ||| ||||| ||||||||  ||| ||||||||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttg 51250505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 55427276 - 55427183
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||| ||||||||| ||||| ||||   ||| ||||||| ||  ||||||||||||||||| ||   ||||||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttg 55427183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 2606436 - 2606464
Alignment:
Q  12 aacccacttagattggcctagtggtattg 40  Q
    |||||||||||||||||||||||||||||    
T  2606436 aacccacttagattggcctagtggtattg 2606464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 5609347 - 5609315
Alignment:
Q  72 ggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||||| ||||||||||||||||    
T  5609347 ggtctcaggttcgattctctctggtgccaattt 5609315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 24273257 - 24273300
Alignment:
Q  54 aagtgtgctcctccttaaggtctcaggttcgattttctctggtgc 98  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||    
T  24273257 aagtgtgctcctc-tgaagatctcaggttcgattttctctggtgc 24273300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 32992655 - 32992707
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag 107  Q
    |||||||||||||| ||||||||| |||||||| || | |||| |||||||||    
T  32992655 agtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgag 32992707  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 56440444 - 56440476
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||||||||||||||||| |||||||||    
T  56440444 agtgtgctcctccttaaggtctccggttcgatt 56440476  T

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Target: scaffold0180 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 20026 - 19932
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagttta 118  Q
    ||||||||||||||||| ||||||||||   ||| |||||||||| |||||||||||||||||| |||||||||  |||||||||||||||||||    
T  20026 ttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaatttgaggggttagttta 19932  T

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Target: scaffold0002 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 95044 - 94935
Alignment:
Q  15 ccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttag 114  Q
    |||||| | ||||||||||||||||| ||||||||||   |||||||||||||| |||||||||||||| ||| |||||||||||||||| | |||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattt-aagggttag 94946  T
Q  115 tttaacttctt 125  Q
    |||| ||||||    
T  94945 tttagcttctt 94935  T

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Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 12188379 - 12188264
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-gggg 110  Q
    ||||||||| | ||||||||||||||||| ||||| ||||   |||||||||||||| ||||| ||| |||||||| ||||| |||||||||||| ||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgaggggg 12188280  T
Q  111 ttagtttaacttcttc 126  Q
    |||||||| |||||||    
T  12188279 ttagtttagcttcttc 12188264  T

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Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 4105075 - 4105145
Alignment:
Q  36 tattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    ||||| |||| ||||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  4105075 tattggcttgaaacctaggagtgtgctcctccttaagatctcaggttcgattttctctggtgtcaatttga 4105145  T

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Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 13330087 - 13330201
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-ggg 110  Q
    ||||||||| | ||| ||||||||||||||||| |||| |   |||  ||||||||| |||||||||| ||||||| ||||| ||||||||||||| |||    
T  13330087 aacccacttgggttgacctagtggtattgactttgaacttgggagtaagctcctcctcaaggtctcagattcgattctctcttgtgccaatttgagaggg 13330186  T
Q  111 ttagtttaacttctt 125  Q
    |||||||| ||||||    
T  13330187 ttagtttagcttctt 13330201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 27989729 - 27989627
Alignment:
Q  16 cacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagt 115  Q
    ||||| ||||||||||||||||||  |||||||| |   ||| ||||||| |||||||| |||||||||||| ||||||||||||||||   ||||||||    
T  27989729 cacttggattggcctagtggtattagcttggaacttgggagtatgctccttcttaaggtttcaggttcgattatctctggtgccaatttacagggttagt 27989630  T
Q  116 tta 118  Q
    |||    
T  27989629 tta 27989627  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 6385882 - 6385955
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||||||||| ||||   | ||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  6385882 gtggtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttg 6385955  T

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Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 11306192 - 11306135
Alignment:
Q  70 aaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  11306192 aaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 11306135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 23910144 - 23910074
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttcttc 126  Q
    |||||||||||||| ||||||||||||||||   |||||||||||||||||| |||||||||||| |||||||    
T  23910144 agtgtgctcctcctcaaggtctcaggttcga--atctctggtgccaatttgagggggttagtttagcttcttc 23910074  T

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Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 15951335 - 15951264
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttctt 125  Q
    |||||||||||||| ||||||||| |||| ||| |||||||| |||||||||| ||||||||||| ||||||    
T  15951335 agtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaatttgagagggttagtttagcttctt 15951264  T

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Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 34444815 - 34444878
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||| ||||||||||||||| |||| | |||||||||||||  ||||||||||||||||||    
T  34444815 ttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgatt 34444878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 11103468 - 11103419
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  11103468 agtgtgctcctccttaaggtctccgattcgattctctctggtgccaattt 11103419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 12234583 - 12234503
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc 92  Q
    ||||||||||| ||||||| ||||||||||||||| ||||   ||||||||||  ||  ||||||||||||||||| ||||    
T  12234583 aacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 33549104 - 33549196
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | |||| || ||||||||| ||||| ||||   ||||||||||||||  ||||||||||||||||| |||| | |||||||||    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 33549196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 10338230 - 10338175
Alignment:
Q  32 gtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    ||||||||| ||||| |||||  |||||||||||||| ||||||||||||||||||    
T  10338230 gtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgatt 10338175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 14278144 - 14278094
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| |||||||    
T  14278144 agtgcgctcctccttaaggtctcaggtttgattctctctggtgtcaatttg 14278094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 28363980 - 28364030
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| |||||||||| ||||||| ||||||||| |||||||    
T  28363980 agtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttg 28364030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 3925741 - 3925858
Alignment:
Q  9 ttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-g 107  Q
    ||||||||| |||| |||  ||||||||||||  |||||| || | |||||| |||| || || ||||||| ||| ||| ||||||||  |||||||| |    
T  3925741 ttgaacccatttaggttgaactagtggtattggtttggaatctgagagtgtgttccttctcaaagtctcagattcaattctctctggtatcaatttgagg 3925840  T
Q  108 gggttagtttaacttctt 125  Q
    ||||||||||| ||||||    
T  3925841 gggttagtttagcttctt 3925858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 7320835 - 7320764
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg-aggggttagtttaacttcttc 126  Q
    |||||||||||||| ||||||||||| |||||| ||| ||||||||||||| | |||||| |||| |||||||    
T  7320835 agtgtgctcctcctgaaggtctcagg-tcgattctctatggtgccaatttgaatgggttaatttagcttcttc 7320764  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 21836768 - 21836864
Alignment:
Q  30 tagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttcttc 126  Q
    ||||||||||| ||||||  || | | |||| ||||||||||||| ||||||| |||| ||| |||| |||||||||| || || |||| |||||||    
T  21836768 tagtggtattggcttggactctgagattgtgttcctccttaaggtttcaggtttgattctctttggtaccaatttgagtggctaatttagcttcttc 21836864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 2092564 - 2092495
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga-ggggttagtttaacttc 123  Q
    ||||||||||| || |||||||||  || |||||||||||||   ||||||| |||||||||||||||||    
T  2092564 agtgtgctcctgctcaaggtctcaaatttgattttctctggtattaatttgagggggttagtttaacttc 2092495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 6691583 - 6691535
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||| | |||||||||||||||||| |||| |||||||||||    
T  6691583 agtgtgctcctc-tcaaggtctcaggttcgattctctccggtgccaattt 6691535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 11448922 - 11448955
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  11448922 aggtctcaggttcgattctctctggtgccaattt 11448955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 28841457 - 28841506
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||||||||||||| ||||||||| |||||||| |||| |||| ||||||    
T  28841457 agtgtgctcctcctcaaggtctcaagttcgattctctccggtgtcaattt 28841506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 14557961 - 14558037
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||| | |||| || ||||| ||| ||||| ||||  |||||||||||||||   ||||||||||||||||    
T  14557961 gaacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgatt 14558037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 31847138 - 31847046
Alignment:
Q  35 gtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaat-ttgaggggttagtttaacttcttc 126  Q
    |||||| |||||||||| | |||||| | ||||| |||||||||  ||||||| || ||| ||| ||| |||| ||| |||||||||||||||    
T  31847138 gtattggcttggaaccttagagtgtgttactcctcaaggtctcaaattcgattctccctgatgcgaatcttgatgggctagtttaacttcttc 31847046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 42597 - 42482
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||| || | ||||||||||||||||||||||||| ||   ||| |||||||||| |  ||||||||||||||| ||| |||||||||||| |||||    
T  42597 gaacccagttgggttggcctagtggtattgacttggaatctgggagtatgctcctcctcagagtctcaggttcgattctctttggtgccaatttaagggg 42498  T
Q  111 ttagtttaacttcttc 126  Q
    ||| |||| |||||||    
T  42497 ttaatttagcttcttc 42482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 38980 - 38884
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    |||| |||||| | |||| || ||||||||| ||||| |||||  ||| ||||| || ||||| ||||| ||||||||||||| |||| ||||||||    
T  38980 tgaatccacttgggttggtctggtggtattggcttgggacctaggagtatgctcatctttaagatctcacgttcgattttctccggtgtcaatttga 38884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 7806 - 7709
Alignment:
Q  8 tttgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||| |||| | |||| || ||||||||| ||||  |||| |||||||||||||||||||||||||| |||||||| | || ||||||||||||    
T  7806 tttgaaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttg 7709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 24053 - 24168
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-ggg 110  Q
    ||||||||| | |||||||| |||||||||||||| || ||  |||||||||||| |  | || |||||||||||| |||||| |||||||||||| |||    
T  24053 aacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtggg 24152  T
Q  111 ttagtttaacttcttc 126  Q
     || ||||||||||||    
T  24153 ctaatttaacttcttc 24168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 35465 - 35367
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgagggg 110  Q
    ||||||||| | || ||| |||||||||| ||||||| |||  ||| |||||||||| ||||||| | |||||||| |||||| |||||||||||||||    
T  35465 aacccacttcggtttgcccagtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctctgatgccaatttgagggg 35367  T

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Target: scaffold0318 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 10615 - 10683
Alignment:
Q  57 tgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttctt 125  Q
    ||||||| |||| ||| |||||| ||| ||| ||| |||||||||||||||||||||||||||||||||    
T  10615 tgtgctcttcctcaagatctcagattcaattctctttggtgccaatttgaggggttagtttaacttctt 10683  T

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Target: scaffold0238 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 2740 - 2693
Alignment:
Q  59 tgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  2740 tgctcctcctcaaggtctcaggttcgattctctctggtgccaatttga 2693  T

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Target: scaffold0074 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 45812 - 45721
Alignment:
Q  35 gtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgag-gggttagtttaacttctt 125  Q
    |||||| ||||| |||||  |||||| |||||||| |||||||| |||||||| ||||||||| ||||||  | ||||||||||||||||||    
T  45812 gtattgccttgggacctaggagtgtgttcctccttgaggtctcatgttcgattctctctggtgtcaatttaggtgggttagtttaacttctt 45721  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 18344 - 18413
Alignment:
Q  57 tgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttgaggggttagtttaacttcttc 126  Q
    |||||||||||| ||||| ||||||| |||| ||||||||||||||||||| || || |||| |||||||    
T  18344 tgtgctcctcctcaaggtttcaggtttgattctctctggtgccaatttgagtggctaatttagcttcttc 18413  T

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Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 163073 - 162993
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||| |||||||| |||||||   |||| | ||||||||||||| |||||||| |||||||||| |||| |||| ||||||    
T  163073 ttggtctagtggttttgacttatgacctgagagtgtgctcctccataaggtctgaggttcgattctctccggtgtcaattt 162993  T

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Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 15399 - 15307
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | |||| || ||||||||| ||||| ||||   ||||||||||||||  ||||||||||||||||| |||| | |||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 15307  T

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Target: scaffold0187 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 12486 - 12383
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc-tggtgccaattt-gaggggttagtttaact 121  Q
    ||||||| |||||||||||||| ||||| |||||||| ||||||| || || ||| |||||||| || | || ||||||||| || ||| ||||||||||    
T  12486 ttggcctggtggtattgacttgaaacctgaaagtgtgatcctcctcaaagtttcaagttcgattctcccttgatgccaatttagatgggctagtttaact 12387  T
Q  122 tctt 125  Q
    ||||    
T  12386 tctt 12383  T

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Target: scaffold0187; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 22814 - 22711
Alignment:
Q  24 ttggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctc-tggtgccaattt-gaggggttagtttaact 121  Q
    ||||||| |||||||||||||| ||||| |||||||| ||||||| || || ||| |||||||| || | || ||||||||| || ||| ||||||||||    
T  22814 ttggcctggtggtattgacttgaaacctgaaagtgtgatcctcctcaaagtttcaagttcgattctcccttgatgccaatttagatgggctagtttaact 22715  T
Q  122 tctt 125  Q
    ||||    
T  22714 tctt 22711  T

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Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 25380 - 25329
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    ||||||||||| || |||||||||||||||||| ||||||||| ||||||||    
T  25380 agtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttga 25329  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 41709 - 41616
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    ||||||||| | ||||||||||||||||| ||||  | || | ||| ||||||||||  ||||||||||||| ||| |||||| || |||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttg 41616  T

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Target: scaffold0299 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 11541 - 11613
Alignment:
Q  25 tggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtg 97  Q
    |||||| ||||||||| ||||| | ||   ||||||||||||||  ||||||||||||||||| |||||||||    
T  11541 tggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtg 11613  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 112282 - 112374
Alignment:
Q  12 aacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||| | ||||||| || |||||| ||||||| ||   |||||| ||||| || |||||| |||||||||| |||| |||||||||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaattt 112374  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 13079 - 13029
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttg 105  Q
    |||||||||||||| |||||||||||||||||| |||| | || |||||||    
T  13079 agtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttg 13029  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 8553 - 8520
Alignment:
Q  71 aggtctcaggttcgattttctctggtgccaattt 104  Q
    ||||||||||||||||| ||||||||||||||||    
T  8553 aggtctcaggttcgattatctctggtgccaattt 8520  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 320073 - 320134
Alignment:
Q  43 ttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaattt 104  Q
    |||| |||||| |||||| || || ||||||||||| |||||||| || |||||||||||||    
T  320073 ttgggacctaagagtgtgttcttcattaaggtctcaagttcgattatcgctggtgccaattt 320134  T

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Target: scaffold0955 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0955
Description:

Target: scaffold0955; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 3461 - 3556
Alignment:
Q  10 tgaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgattttctctggtgccaatttga 106  Q
    |||| |||||| | ||||||  ||||||||| ||||| ||||| |||| ||||| |  ||||| ||||| ||||||||||||| |||| ||||||||    
T  3461 tgaatccacttgggttggccgggtggtattggcttgggacctagaagtatgctcatt-ttaagatctcacgttcgattttctccggtgtcaatttga 3556  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 2503 - 2471
Alignment:
Q  55 agtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||||||| ||||||||||||||||||    
T  2503 agtgtgctcctcctcaaggtctcaggttcgatt 2471  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 2986 - 2910
Alignment:
Q  11 gaacccacttagattggcctagtggtattgacttggaacctaaaagtgtgctcctccttaaggtctcaggttcgatt 87  Q
    |||||||||| | ||||| | ||||| |||  |||| ||||  ||||||| ||||||||||||||||| ||||||||    
T  2986 gaacccacttgggttggcttggtggttttggtttgggaccttgaagtgtgatcctccttaaggtctcaagttcgatt 2910  T

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