View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5557_low_32 (Length: 227)
Name: NF5557_low_32
Description: NF5557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5557_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 8891663 - 8891852
Alignment:
| Q |
23 |
aatcacatcataccatcctcatcttagctagaaaaatactactatcaataaataactatactactatcaacaaataactcaaaaagacagctaaatatag |
122 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
8891663 |
aatcacatcataccatcctcatcttagctagaaaaataatactatcaataaataactatactactatcaacaaataactcaaaaagatagctaaatatag |
8891762 |
T |
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| Q |
123 |
aacgcaaatgacccccttctgatcaaagatcatttcaaaaagaagtattttcaccattcctcactctacgtaccacaacttcctcaaact |
212 |
Q |
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||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
8891763 |
aacgcaaataacccccttctaatcaaagatcattccaaaaagaagtattttcaccattcctcactctacataccacaacttcctcaaact |
8891852 |
T |
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