View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5558-Insertion-8 (Length: 200)
Name: NF5558-Insertion-8
Description: NF5558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5558-Insertion-8 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 43970672 - 43970852
Alignment:
| Q |
8 |
gccaacgtcattaagaaattgacattaattgtttaaggagaaaggtataacagatcatgttgatttgtacatagcattatagcaatgaaatttatgtttg |
107 |
Q |
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| T |
43970672 |
gccaccgtcattaagaaattgacattaattgtgtaaggagaaaggtataacagatcatgctgatttgtacatagcattatagcaatgaaatttatgtttg |
43970771 |
T |
|
| Q |
108 |
tatggtggaaatttaacagatttctattttgagattttgaattggagttgctggtctattatatgttttttaatcgcactca |
189 |
Q |
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| T |
43970772 |
tatggtagaaatttaacagatttctattttgagattttgaattggagttgct-gtctattatattttttttaatctcactca |
43970852 |
T |
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