View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5560-Insertion-1 (Length: 1158)

Name: NF5560-Insertion-1
Description: NF5560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5560-Insertion-1
NF5560-Insertion-1
[»] chr1 (37 HSPs)
chr1 (114-702)||(10554955-10555549)
chr1 (704-985)||(13590469-13590749)
chr1 (704-962)||(20372207-20372457)
chr1 (823-985)||(20481214-20481375)
chr1 (705-865)||(5077351-5077511)
chr1 (704-821)||(13673893-13674010)
chr1 (15-113)||(10554832-10554930)
chr1 (487-616)||(29201108-29201237)
chr1 (869-971)||(19846029-19846130)
chr1 (881-980)||(37223561-37223659)
chr1 (896-962)||(19845816-19845882)
chr1 (706-756)||(33097409-33097459)
chr1 (706-756)||(51801745-51801795)
chr1 (881-978)||(37223731-37223827)
chr1 (896-960)||(13673947-13674011)
chr1 (516-615)||(23297813-23297912)
chr1 (704-756)||(35198193-35198245)
chr1 (704-756)||(37639343-37639395)
chr1 (881-980)||(37223391-37223489)
chr1 (881-980)||(37223901-37223999)
chr1 (881-980)||(37224071-37224169)
chr1 (706-756)||(44260522-44260572)
chr1 (706-756)||(44688622-44688672)
chr1 (896-973)||(5077382-5077458)
chr1 (758-835)||(19845816-19845893)
chr1 (702-747)||(30788348-30788393)
chr1 (881-980)||(37223221-37223319)
chr1 (706-756)||(2741040-2741090)
chr1 (706-756)||(31529677-31529727)
chr1 (757-834)||(20372390-20372467)
chr1 (757-834)||(20481286-20481363)
chr1 (704-753)||(28323347-28323396)
chr1 (702-751)||(51420345-51420394)
chr1 (704-756)||(11421596-11421648)
chr1 (704-752)||(49936953-49937001)
chr1 (704-752)||(50351805-50351853)
chr1 (841-874)||(15992409-15992442)
[»] chr5 (24 HSPs)
chr5 (707-985)||(7183142-7183419)
chr5 (704-985)||(39056236-39056516)
chr5 (758-985)||(33868835-33869061)
chr5 (707-985)||(15912919-15913192)
chr5 (862-980)||(25192275-25192392)
chr5 (706-810)||(6054369-6054473)
chr5 (704-756)||(33868157-33868209)
chr5 (702-756)||(16668806-16668860)
chr5 (704-756)||(16552651-16552703)
chr5 (707-756)||(4674965-4675014)
chr5 (757-834)||(33868972-33869049)
chr5 (703-756)||(18465568-18465621)
chr5 (699-752)||(30783432-30783485)
chr5 (704-752)||(3884051-3884099)
chr5 (896-979)||(30408683-30408765)
chr5 (933-979)||(30407675-30407720)
chr5 (933-979)||(30407876-30407921)
chr5 (933-979)||(30408078-30408123)
chr5 (933-979)||(30408883-30408928)
chr5 (795-832)||(30407683-30407720)
chr5 (795-832)||(30407884-30407921)
chr5 (795-832)||(30408086-30408123)
chr5 (795-832)||(30408691-30408728)
chr5 (795-832)||(30408891-30408928)
[»] scaffold0460 (1 HSPs)
scaffold0460 (704-985)||(1606-1886)
[»] chr3 (37 HSPs)
chr3 (702-985)||(32232991-32233273)
chr3 (707-937)||(41568836-41569064)
chr3 (861-931)||(51452934-51453004)
chr3 (319-392)||(53281396-53281469)
chr3 (704-755)||(51682015-51682066)
chr3 (704-756)||(23755287-23755339)
chr3 (704-756)||(47728390-47728442)
chr3 (881-980)||(11974888-11974986)
chr3 (706-756)||(37319472-37319522)
chr3 (758-835)||(40219300-40219377)
chr3 (896-973)||(40219301-40219377)
chr3 (758-835)||(40219501-40219578)
chr3 (896-973)||(40219502-40219578)
chr3 (758-835)||(40219702-40219779)
chr3 (896-973)||(40219703-40219779)
chr3 (758-835)||(40219903-40219980)
chr3 (896-973)||(40219904-40219980)
chr3 (881-980)||(11975058-11975156)
chr3 (881-980)||(11975228-11975326)
chr3 (530-616)||(14857883-14857966)
chr3 (706-756)||(53594972-53595022)
chr3 (704-756)||(23699329-23699381)
chr3 (704-756)||(23717784-23717836)
chr3 (704-756)||(23736240-23736292)
chr3 (704-756)||(28299964-28300016)
chr3 (487-550)||(35575240-35575304)
chr3 (706-754)||(39195122-39195170)
chr3 (881-980)||(11975398-11975496)
chr3 (704-752)||(9106269-9106317)
chr3 (704-752)||(26662554-26662602)
chr3 (704-752)||(30947927-30947975)
chr3 (704-752)||(33414029-33414077)
chr3 (705-756)||(41192362-41192413)
chr3 (705-756)||(51846792-51846843)
chr3 (790-832)||(11975445-11975487)
chr3 (513-614)||(45972403-45972504)
chr3 (906-947)||(11975650-11975691)
[»] chr7 (46 HSPs)
chr7 (704-985)||(6797170-6797449)
chr7 (704-985)||(45402654-45402934)
chr7 (742-941)||(21405858-21406055)
chr7 (758-874)||(12283286-12283402)
chr7 (758-874)||(10564157-10564273)
chr7 (758-874)||(12283395-12283511)
chr7 (758-874)||(12283504-12283620)
chr7 (896-962)||(12283504-12283570)
chr7 (896-973)||(12283395-12283471)
chr7 (896-962)||(10564266-10564332)
chr7 (896-977)||(10564649-10564729)
chr7 (291-382)||(7744670-7744760)
chr7 (869-980)||(13420620-13420730)
chr7 (896-973)||(10563831-10563907)
chr7 (896-973)||(12283083-12283159)
chr7 (896-962)||(10564458-10564524)
chr7 (896-973)||(12283286-12283362)
chr7 (872-980)||(13420419-13420526)
chr7 (704-756)||(39007661-39007713)
chr7 (704-756)||(44141263-44141315)
chr7 (758-837)||(12283083-12283162)
chr7 (706-756)||(34875493-34875543)
chr7 (897-962)||(10564554-10564619)
chr7 (704-756)||(5757388-5757440)
chr7 (291-382)||(12543185-12543273)
chr7 (881-980)||(4721010-4721108)
chr7 (701-756)||(46346728-46346783)
chr7 (758-848)||(10564266-10564356)
chr7 (758-848)||(10564458-10564548)
chr7 (896-973)||(10564157-10564233)
chr7 (917-962)||(10564383-10564428)
chr7 (880-924)||(16931963-16932007)
chr7 (880-924)||(16937346-16937390)
chr7 (506-614)||(21774052-21774156)
chr7 (797-848)||(10564592-10564643)
chr7 (758-835)||(10563831-10563908)
chr7 (699-752)||(16933260-16933313)
chr7 (699-752)||(16938643-16938696)
chr7 (909-961)||(21405975-21406027)
chr7 (704-756)||(27335641-27335692)
chr7 (704-739)||(924427-924462)
chr7 (797-848)||(10564401-10564452)
chr7 (705-756)||(11732659-11732710)
chr7 (896-927)||(12283613-12283644)
chr7 (705-756)||(24359874-24359925)
chr7 (566-619)||(44570123-44570175)
[»] scaffold0069 (2 HSPs)
scaffold0069 (704-962)||(51361-51619)
scaffold0069 (757-834)||(51552-51629)
[»] scaffold0012 (1 HSPs)
scaffold0012 (704-985)||(119204-119484)
[»] scaffold0006 (3 HSPs)
scaffold0006 (704-985)||(209328-209608)
scaffold0006 (704-821)||(171507-171624)
scaffold0006 (896-960)||(171561-171625)
[»] chr4 (50 HSPs)
chr4 (707-985)||(2847894-2848170)
chr4 (711-941)||(34986252-34986481)
chr4 (736-985)||(20588028-20588276)
chr4 (758-973)||(9561060-9561274)
chr4 (758-870)||(9561024-9561136)
chr4 (897-961)||(1701131-1701195)
chr4 (896-973)||(34986298-34986374)
chr4 (896-973)||(55780302-55780378)
chr4 (896-973)||(55844482-55844558)
chr4 (704-756)||(24686574-24686626)
chr4 (704-756)||(25574140-25574192)
chr4 (881-980)||(808735-808833)
chr4 (881-980)||(809106-809204)
chr4 (881-980)||(809647-809745)
chr4 (513-616)||(42845296-42845398)
chr4 (896-973)||(9561583-9561659)
chr4 (758-835)||(55780302-55780379)
chr4 (758-835)||(55844482-55844559)
chr4 (884-980)||(810018-810113)
chr4 (869-980)||(808936-809046)
chr4 (869-980)||(809477-809587)
chr4 (764-835)||(9561582-9561653)
chr4 (896-962)||(810236-810302)
chr4 (706-756)||(16298925-16298975)
chr4 (881-980)||(809307-809405)
chr4 (869-980)||(809848-809958)
chr4 (881-980)||(54754306-54754404)
chr4 (521-615)||(48546137-48546230)
chr4 (706-756)||(38010145-38010195)
chr4 (869-979)||(54757664-54757773)
chr4 (758-827)||(810233-810302)
chr4 (897-953)||(9561471-9561527)
chr4 (704-756)||(10472499-10472551)
chr4 (704-752)||(13635741-13635789)
chr4 (704-752)||(49492528-49492576)
chr4 (704-752)||(55765483-55765531)
chr4 (705-756)||(30357810-30357861)
chr4 (896-979)||(54756887-54756969)
chr4 (706-756)||(43852633-43852682)
chr4 (539-585)||(49863058-49863103)
chr4 (156-190)||(51768114-51768148)
chr4 (933-979)||(54756723-54756768)
chr4 (933-979)||(54757527-54757572)
chr4 (790-832)||(54757723-54757765)
chr4 (931-980)||(9560953-9561001)
chr4 (793-834)||(9560960-9561001)
chr4 (405-465)||(12105289-12105347)
chr4 (795-832)||(54756723-54756760)
chr4 (795-832)||(54756924-54756961)
chr4 (795-832)||(54757527-54757564)
[»] scaffold0002 (1 HSPs)
scaffold0002 (704-985)||(450204-450483)
[»] scaffold0717 (1 HSPs)
scaffold0717 (707-985)||(7126-7403)
[»] chr2 (36 HSPs)
chr2 (707-941)||(24024451-24024685)
chr2 (824-980)||(28056122-28056277)
chr2 (487-615)||(17072206-17072330)
chr2 (704-756)||(5098718-5098770)
chr2 (881-980)||(21173659-21173757)
chr2 (881-980)||(27970518-27970616)
chr2 (881-980)||(44348249-44348347)
chr2 (896-973)||(24024558-24024634)
chr2 (896-973)||(28048248-28048324)
chr2 (778-870)||(30771316-30771409)
chr2 (704-756)||(25995288-25995340)
chr2 (895-962)||(30771406-30771473)
chr2 (706-756)||(39548046-39548096)
chr2 (766-835)||(28048256-28048325)
chr2 (756-841)||(30771405-30771490)
chr2 (869-962)||(44348467-44348560)
chr2 (704-756)||(4281800-4281852)
chr2 (881-980)||(21173489-21173587)
chr2 (869-980)||(27970135-27970245)
chr2 (879-962)||(27970315-27970398)
chr2 (869-980)||(28056640-28056750)
chr2 (879-962)||(28056820-28056903)
chr2 (879-962)||(30767528-30767611)
chr2 (879-962)||(30771691-30771774)
chr2 (881-980)||(44350773-44350871)
chr2 (706-756)||(13081872-13081922)
chr2 (707-756)||(40853691-40853740)
chr2 (704-756)||(36636949-36637001)
chr2 (906-954)||(44347798-44347846)
chr2 (881-961)||(44348638-44348718)
chr2 (710-756)||(16142087-16142133)
chr2 (758-832)||(28056194-28056268)
chr2 (881-955)||(28057023-28057097)
chr2 (539-598)||(19315330-19315387)
chr2 (916-962)||(30771316-30771362)
chr2 (702-751)||(34464711-34464760)
[»] chr6 (29 HSPs)
chr6 (704-962)||(32556346-32556606)
chr6 (726-985)||(7851363-7851618)
chr6 (758-960)||(18762652-18762854)
chr6 (276-392)||(15339585-15339701)
chr6 (758-874)||(18762600-18762716)
chr6 (758-874)||(18762491-18762607)
chr6 (869-980)||(28123278-28123388)
chr6 (869-980)||(28123477-28123587)
chr6 (896-973)||(18762531-18762607)
chr6 (896-980)||(18762415-18762498)
chr6 (896-973)||(18762778-18762854)
chr6 (707-779)||(27079919-27079991)
chr6 (881-980)||(22038098-22038196)
chr6 (702-756)||(18611188-18611242)
chr6 (869-979)||(15033977-15034086)
chr6 (869-962)||(22038316-22038409)
chr6 (706-759)||(4338629-4338682)
chr6 (756-829)||(32556538-32556611)
chr6 (906-954)||(22037647-22037695)
chr6 (869-961)||(22038487-22038579)
chr6 (709-756)||(16968035-16968082)
chr6 (907-962)||(28123076-28123131)
chr6 (705-756)||(30908655-30908706)
chr6 (763-835)||(28123070-28123142)
chr6 (704-752)||(31216664-31216712)
chr6 (773-832)||(28123519-28123578)
chr6 (790-832)||(15034036-15034078)
chr6 (896-962)||(28122934-28123000)
chr6 (795-832)||(28123342-28123379)
[»] chr8 (32 HSPs)
chr8 (707-867)||(44508953-44509113)
chr8 (276-386)||(24917605-24917715)
chr8 (277-392)||(1081025-1081140)
chr8 (869-980)||(17225599-17225709)
chr8 (869-980)||(17057581-17057691)
chr8 (869-980)||(17590534-17590644)
chr8 (896-962)||(40006060-40006126)
chr8 (869-962)||(17225777-17225870)
chr8 (704-756)||(2522869-2522921)
chr8 (896-962)||(17225384-17225450)
chr8 (706-756)||(40247297-40247347)
chr8 (869-980)||(17057379-17057490)
chr8 (869-980)||(17590735-17590846)
chr8 (706-757)||(10443581-10443632)
chr8 (706-756)||(13526683-13526733)
chr8 (706-756)||(13616218-13616268)
chr8 (896-962)||(44508996-44509062)
chr8 (758-835)||(17225384-17225461)
chr8 (758-835)||(40005572-40005649)
chr8 (896-973)||(40005572-40005648)
chr8 (704-756)||(12355424-12355476)
chr8 (896-962)||(40005974-40006040)
chr8 (896-962)||(40006146-40006212)
chr8 (758-835)||(40005773-40005850)
chr8 (896-973)||(40005773-40005849)
chr8 (705-756)||(9852273-9852324)
chr8 (705-756)||(34648140-34648191)
chr8 (758-829)||(40005974-40006045)
chr8 (917-962)||(40006124-40006169)
chr8 (704-756)||(15181792-15181844)
chr8 (704-752)||(30413916-30413964)
chr8 (711-756)||(30651958-30652003)
[»] scaffold0065 (8 HSPs)
scaffold0065 (758-973)||(413-626)
scaffold0065 (766-961)||(559-746)
scaffold0065 (896-980)||(790-872)
scaffold0065 (758-874)||(681-797)
scaffold0065 (896-973)||(25-101)
scaffold0065 (758-835)||(25-102)
scaffold0065 (758-834)||(790-865)
scaffold0065 (897-953)||(157-213)
[»] scaffold0104 (8 HSPs)
scaffold0104 (758-971)||(39112-39321)
scaffold0104 (896-973)||(39474-39550)
scaffold0104 (888-973)||(39245-39330)
scaffold0104 (758-835)||(39473-39550)
scaffold0104 (873-957)||(38896-38983)
scaffold0104 (758-832)||(38883-38957)
scaffold0104 (896-954)||(39869-39927)
scaffold0104 (758-835)||(39850-39927)
[»] scaffold0019 (4 HSPs)
scaffold0019 (758-971)||(168518-168727)
scaffold0019 (896-973)||(168518-168594)
scaffold0019 (896-973)||(168324-168400)
scaffold0019 (758-835)||(168324-168401)
[»] scaffold0558 (6 HSPs)
scaffold0558 (758-971)||(10640-10831)
scaffold0558 (896-973)||(10436-10512)
scaffold0558 (896-962)||(10059-10125)
scaffold0558 (758-835)||(10436-10513)
scaffold0558 (758-835)||(10059-10136)
scaffold0558 (896-973)||(10640-10716)
[»] scaffold0050 (14 HSPs)
scaffold0050 (758-874)||(16190-16306)
scaffold0050 (896-973)||(22603-22679)
scaffold0050 (759-863)||(22770-22874)
scaffold0050 (896-973)||(16121-16197)
scaffold0050 (901-973)||(22799-22870)
scaffold0050 (896-973)||(16512-16588)
scaffold0050 (773-849)||(16106-16182)
scaffold0050 (758-853)||(22584-22679)
scaffold0050 (896-955)||(22720-22779)
scaffold0050 (758-853)||(22680-22779)
scaffold0050 (896-960)||(16242-16306)
scaffold0050 (798-852)||(22877-22931)
scaffold0050 (896-942)||(16055-16101)
scaffold0050 (936-973)||(22895-22931)
[»] scaffold0455 (7 HSPs)
scaffold0455 (869-980)||(1563-1673)
scaffold0455 (869-980)||(1762-1872)
scaffold0455 (869-980)||(1364-1474)
scaffold0455 (907-962)||(1162-1217)
scaffold0455 (763-835)||(1156-1228)
scaffold0455 (773-832)||(1804-1863)
scaffold0455 (896-962)||(1020-1086)
[»] scaffold0144 (15 HSPs)
scaffold0144 (881-979)||(19669-19766)
scaffold0144 (885-979)||(30933-31026)
scaffold0144 (881-979)||(33385-33482)
scaffold0144 (881-979)||(33895-33992)
scaffold0144 (881-979)||(34065-34162)
scaffold0144 (881-980)||(28783-28881)
scaffold0144 (881-979)||(19499-19596)
scaffold0144 (881-979)||(33555-33652)
scaffold0144 (881-962)||(19839-19920)
scaffold0144 (881-979)||(33725-33822)
scaffold0144 (881-971)||(34243-34332)
scaffold0144 (881-962)||(34421-34502)
scaffold0144 (917-980)||(28649-28711)
scaffold0144 (924-979)||(19372-19426)
scaffold0144 (924-979)||(34575-34629)
[»] scaffold0534 (2 HSPs)
scaffold0534 (879-980)||(8855-8955)
scaffold0534 (924-980)||(5927-5982)
[»] scaffold0023 (4 HSPs)
scaffold0023 (879-980)||(126247-126347)
scaffold0023 (869-980)||(126417-126527)
scaffold0023 (881-980)||(128570-128668)
scaffold0023 (906-947)||(125615-125656)
[»] scaffold0553 (2 HSPs)
scaffold0553 (896-962)||(6375-6439)
scaffold0553 (758-835)||(6375-6450)
[»] scaffold0581 (3 HSPs)
scaffold0581 (704-752)||(8437-8485)
scaffold0581 (933-979)||(310-355)
scaffold0581 (795-832)||(310-347)


Alignment Details
Target: chr1 (Bit Score: 441; Significance: 0; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 114 - 702
Target Start/End: Original strand, 10554955 - 10555549
Alignment:
Q  114 atgaaagaattaattaaggattaaaaacatataaatgactacactcataaactcattgtcttaaggtttagggtaaagacactagaagnnnnnnnnn--- 210  Q
    ||||||||||||||||||||| | ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||                
T  10554955 atgaaagaattaattaaggataagaaacatataaatgagagcactcataaactcattgtcttaaggtttagggtaaagacactacaagaaaaaaaaaaaa 10555054  T
Q  211 ---gcattttgcgacccttaaaatgatagatgacgaccgttctatgtattttctggttctgggtcactgttatggtggtgaccggtgatgaaggaggtgg 307  Q
       |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10555055 aaggcattttgcgacccttaaaatgacggatgacgaccgttctatgtattttctggttctgggtcaccgttatggtggtgaccggtgatgaaggaggtgg 10555154  T
Q  308 tggtggaggccgacgagaaagagagaggagcaccaacggccggccatcaaagggaggggtggggcgaaggacaaggatgaggcggaggcggcgacattgg 407  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  10555155 tggtggcggccgacgagaaagagagaggagcaccaacggtcggccatcaaagggaggggtggggcgaacggcaaggatgaggcggaggcggcgacattgg 10555254  T
Q  408 tggtggtaaaggagtgtggatgatgtggtgatgagatagagaggagtgagagagatctattaaagtgttagggtgtgttttgcagagaaggattggaaag 507  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  10555255 tggtggtaaaggagtgtggatgatgtggtgatgagatagagagaagtgagagagatctgttaaagtgttagggtgtgttttgcagaggaggattggaaag 10555354  T
Q  508 agtgaaaggattgaaaagaagggtttgcgaaattaccaaaataccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgtgtatgaatc 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10555355 agtgaaaggattgaaaagaagggtttgcgaaattaccaaaataccctatcatataagggtgtgtacaagagcggtatgggaaaaagggtgtctatgaatc 10555454  T
Q  608 attttccttgttgatgatcttgcttttgttgtatcacaggttgctaaactgatgtccttcaacctaggtgtaaatattaaagtatgacatgtggg 702  Q
    |||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  10555455 atttaccttcttgatgatcgtgcttttgttgtatcgcaggttgctaaactgatgtccttcaacctaggtgtaagtattaaaatatgacatttggg 10555549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 704 - 985
Target Start/End: Original strand, 13590469 - 13590749
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| ||||| |||||||||||||| ||||| | ||||||||||||    
T  13590469 caaaagttattatgcataagtcatttccttatgcaccctgcataaacactttacaaaaccattaaacaattattttggtctctcatataagactatcaaa 13590568  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| |||||||||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13590569 accattaaaccataattatgggttcaataataatttgagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaatcat 13590668  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  13590669 tacacaattatcttcgtttcacatacaagactatcaaaaccattaaatcatacttat-ggtttcagtaatccataccctgaa 13590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 704 - 962
Target Start/End: Original strand, 20372207 - 20372457
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||    
T  20372207 caaaaattattatgcataagtcattttcttatgcaccctgcataaacacttcacaaaaccattagacaattattttggtttctcatataagactatcaaa 20372306  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    |||||        ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20372307 accat--------aattatggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 20372398  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20372399 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 20372457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 823 - 985
Target Start/End: Original strand, 20481214 - 20481375
Alignment:
Q  823 ggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggttt 922  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20481214 ggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataatactttcattaaaaaccattacacaattatcttggttt 20481313  T
Q  923 cacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20481314 tacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccataccttgaa 20481375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 705 - 865
Target Start/End: Complemental strand, 5077511 - 5077351
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaa 804  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5077511 aaaagttattatgcataagtcatttccttatgcgccctgcataagcacttcacaaaatcattagacaattattttggtttctcatagaagactatcaaaa 5077412  T
Q  805 ccattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatt 865  Q
    |||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  5077411 ccattaaaccataagtatggtttcagtaataatttcagtgtataacatcttaatcattatt 5077351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 704 - 821
Target Start/End: Original strand, 13673893 - 13674010
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||    
T  13673893 caaaaattattatgcataagtcatttccttatgcaccctgtataaacacttcacaaaaccattagacaattattttggtttctcatataagactatcaaa 13673992  T
Q  804 accattataccataatta 821  Q
    ||||||| ||||||||||    
T  13673993 accattaaaccataatta 13674010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 10554832 - 10554930
Alignment:
Q  15 tatgatatgttgtcaagtttgtatgttaaaatattatttatctataaataattgtggtagagtagcaattccgactataaaattgttgtgatatgtcaa 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  10554832 tatgatatgttgtcaaatttgtatgttaaaatattatttatctataaataattgtgttagactagcaatcccgactataaaactgttgtgatatgtcaa 10554930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 487 - 616
Target Start/End: Original strand, 29201108 - 29201237
Alignment:
Q  487 ttgcagagaaggattggaaagagtgaaaggattgaaaagaagggtttgcgaaattacc-aaaataccctgtcatataagggtgtgtacaagagtggtatg 585  Q
    |||||||| |||| |||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| || |  ||||||||     
T  29201108 ttgcagaggaggaatggagagagtgacaggattgaaaaaaagggtttgcgaaattaccaaaaataccctgccatataagggtgtatagagaagtggtat- 29201206  T
Q  586 ggaaaaagggtgtgtatgaatcattttcctt 616  Q
    ||||||||||||| |||||||||||||||||    
T  29201207 ggaaaaagggtgtttatgaatcattttcctt 29201237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 869 - 971
Target Start/End: Original strand, 19846029 - 19846130
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| |||||||||||||||| |||||||||||||  |||||||||||| ||||| || |||||||||||||||||||||||||||| |||||||    
T  19846029 aaccatgtaccaataataatttcatttaaaaccattacacccttatcttggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttca 19846127  T
Q  969 gta 971  Q
    |||    
T  19846128 gta 19846130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 37223561 - 37223659
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| ||||   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  37223561 ataataatttcatctaaaaccattacaccattagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 37223659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 19845816 - 19845882
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| |||||||  ||||||||||||| || ||||||||||||||||||||||||||||||    
T  19845816 aaaaccattagacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacttatgg 19845882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 33097409 - 33097459
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33097409 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 33097459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 51801795 - 51801745
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51801795 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 51801745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 881 - 978
Target Start/End: Original strand, 37223731 - 37223827
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccata 978  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||    
T  37223731 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccata 37223827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 896 - 960
Target Start/End: Original strand, 13673947 - 13674011
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat 960  Q
    |||||||||| |||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  13673947 aaaaccattagacaattattttggtttctcatataagactatcaaaaccattaaaccataattat 13674011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 516 - 615
Target Start/End: Original strand, 23297813 - 23297912
Alignment:
Q  516 gattgaaaagaagggtttgcgaaattaccaaaa-taccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgtgtatgaatcattttcc 614  Q
    ||||||||| |||| ||||| |||||||||||| |||||| |||||||||||||| || |  |||||||||  ||||||||||| |||||||||||||||    
T  23297813 gattgaaaaaaaggatttgcaaaattaccaaaaataccctctcatataagggtgtatagagaagtggtatga-aaaaagggtgtttatgaatcattttcc 23297911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 35198245 - 35198193
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  35198245 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttca 35198193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 37639343 - 37639395
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37639343 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttca 37639395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 37223391 - 37223489
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || | | |||||  ||||| || ||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  37223391 ataataatttcatctaaaaccattacaccataagcatggttctacatataacactgtcaaaaccattaaaccatacttat-ggtttcagtattccatacc 37223489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 37223901 - 37223999
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  |||| |||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  37223901 ataataatttcatctaaaatcattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 37223999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 37224071 - 37224169
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  37224071 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaatcattaaaccatacttat-ggtttcagtattccatacc 37224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 44260522 - 44260572
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  44260522 aaagttattatgcgtaagtcatttccttatgcaccctgcataaacacttca 44260572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 44688672 - 44688622
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  44688672 aaagttatcatgcataagtcatttccttatgcacgctgcataaacacttca 44688622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 5077458 - 5077382
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||| ||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||  ||| ||||||||||||    
T  5077458 aaaatcattagacaattattttggtttctcatagaagactatcaaaaccattaaaccataagtat-ggtttcagtaat 5077382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 19845816 - 19845893
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||| ||||||    
T  19845816 aaaaccattagacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacttatggtttctgtaata 19845893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 702 - 747
Target Start/End: Original strand, 30788348 - 30788393
Alignment:
Q  702 gacaaaagttattatgcataagtcatttccttatgcactctgcata 747  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  30788348 gacaaaagttattatgcataagtcatttccttatgcagtctgcata 30788393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 37223221 - 37223319
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||| ||||||| || |   | |||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  37223221 ataataatttcatctaaaactattacaccataagtatcgttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 37223319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 2741040 - 2741090
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  2741040 aaagttattatgcataagtcatttctttatgtactctgcataaacatttca 2741090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 31529727 - 31529677
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  31529727 aaagttattatgcataagccatttccttatgcaccatgcataaacacttca 31529677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 757 - 834
Target Start/End: Original strand, 20372390 - 20372467
Alignment:
Q  757 aaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaat 834  Q
    ||||| ||||| |||||||| |||||||| || | ||||||||||||||||||| |||||| ||| |||||| |||||    
T  20372390 aaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggtttcggtaat 20372467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 757 - 834
Target Start/End: Original strand, 20481286 - 20481363
Alignment:
Q  757 aaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaat 834  Q
    ||||| ||||| |||||||| |||||||  || | ||||||||||||||||||| |||||| ||| ||||||||||||    
T  20481286 aaaaaccattacacaattatcttggttttacatacaagactatcaaaaccattaaaccatacttatggtttcagtaat 20481363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 704 - 753
Target Start/End: Complemental strand, 28323396 - 28323347
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacact 753  Q
    ||||||||||||||||||||||||||  |||||||| || ||||||||||    
T  28323396 caaaagttattatgcataagtcatttttttatgcaccctccataaacact 28323347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 702 - 751
Target Start/End: Original strand, 51420345 - 51420394
Alignment:
Q  702 gacaaaagttattatgcataagtcatttccttatgcactctgcataaaca 751  Q
    ||||||||||||||||||||||||| ||| |||||||  |||||||||||    
T  51420345 gacaaaagttattatgcataagtcaattctttatgcatcctgcataaaca 51420394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 11421596 - 11421648
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||  ||||||| ||||||||||||||||  |||||||||||||||    
T  11421596 caaaagttatggtgcataaatcatttccttatgcaccgtgcataaacacttca 11421648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 49937001 - 49936953
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  49937001 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 49936953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Original strand, 50351805 - 50351853
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  50351805 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 50351853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 841 - 874
Target Start/End: Complemental strand, 15992442 - 15992409
Alignment:
Q  841 agtgtataacatcttaatcattatttaaaaccat 874  Q
    ||||||||||||||||||||||||||||| ||||    
T  15992442 agtgtataacatcttaatcattatttaaagccat 15992409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 707 - 985
Target Start/End: Original strand, 7183142 - 7183419
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaacc 806  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |    
T  7183142 aagttattatgcataagtcagttccttatgcacactgcataaacacttcacaaaaccattagacaattattttggtttctcatagaagactatcaaaatc 7183241  T
Q  807 attataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattac 906  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7183242 attaaaccataattatggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattac 7183341  T
Q  907 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  7183342 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccacaccctgaa 7183419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 704 - 985
Target Start/End: Complemental strand, 39056516 - 39056236
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||||||||||||||||| |||||| ||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  39056516 caaaagttattatgcataaatcattttcttatgcaccctgcttaaacacttcacaaaaccattagacaattattttggtttctcatagaagactatcaaa 39056417  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  39056416 accattaaaccataattatggtttcagtaataatttcagtgtataccatcttaatcgttatttaaaaccatgtcacaataatcatttcattaaaaaccat 39056317  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  39056316 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccataccctgaa 39056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 758 - 985
Target Start/End: Original strand, 33868835 - 33869061
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  33868835 aaaatcattagacaattattttggtttctcatagaagactatcaaaaccattaaaccataattatggtttcagtaataatttcagtgtataacatcttaa 33868934  T
Q  858 tcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33868935 tcattatttaaaaccatgtaacaataataatttcattaaaaatcattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 33869034  T
Q  958 tatgggtttcagtaatccataccatgaa 985  Q
    | | ||||||||||||||||||| ||||    
T  33869035 t-ttggtttcagtaatccataccctgaa 33869061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 707 - 985
Target Start/End: Complemental strand, 15913192 - 15912919
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaacc 806  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||| | |||| ||| | |||||||||||||||||||| ||||||||||||||| |    
T  15913192 aagttattatgcataagtcagttccttatgcatcctgcataaacactttacaaaaccatcatacaattattttggtttctcatagaagactatcaaaatc 15913093  T
Q  807 attataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattac 906  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15913092 attaaaccataattatggtttcagtaataattttagtgtataacatcttaatcattatttaaaatcatgtaacaataataatttcattaaaaaccattac 15912993  T
Q  907 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||     ||||||||||||||| ||| ||||    
T  15912992 acaattatattggtttcacatacaagactatcaaaaccattaaaccatac-----ggtttcagtaatccacaccctgaa 15912919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 862 - 980
Target Start/End: Complemental strand, 25192392 - 25192275
Alignment:
Q  862 tatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatg 961  Q
    |||| ||||| ||||| |||||||||||||||| |||||||||||||  |||||||||||| ||||| || ||| |||||||||||||||||||| |||     
T  25192392 tattcaaaactatgtaccaataataatttcatttaaaaccattacacccttatcttggttttacatagaacactttcaaaaccattaaaccatacgtat- 25192294  T
Q  962 ggtttcagtaatccatacc 980  Q
    |||||||||| ||||||||    
T  25192293 ggtttcagtattccatacc 25192275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 706 - 810
Target Start/End: Original strand, 6054369 - 6054473
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaac 805  Q
    ||||| |||||||||||||||||| | ||||||  ||  |||| || |||| ||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  6054369 aaagtcattatgcataagtcattttcctatgcatcctatataagcatttcacaaaattattagacaattattttggtttctcatagaagacaatcaaaac 6054468  T
Q  806 catta 810  Q
    |||||    
T  6054469 catta 6054473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 33868157 - 33868209
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33868157 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 33868209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 702 - 756
Target Start/End: Complemental strand, 16668860 - 16668806
Alignment:
Q  702 gacaaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  16668860 gacaaaagttattatgcataagacatttccttatgcaccctgcataaacacttca 16668806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 16552703 - 16552651
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16552703 caaaagttattatgcataagtcatttccttatgcaccatgcataaacacttca 16552651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 707 - 756
Target Start/End: Original strand, 4674965 - 4675014
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  4674965 aagttattatgcgtaagtcatttccttatgcaccctgcataaacacttca 4675014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 757 - 834
Target Start/End: Original strand, 33868972 - 33869049
Alignment:
Q  757 aaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaat 834  Q
    ||||||||||| |||||||| |||||||| || | ||||||||||||||||||| |||||| ||  ||||||||||||    
T  33868972 aaaaatcattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttttggtttcagtaat 33869049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 703 - 756
Target Start/End: Complemental strand, 18465621 - 18465568
Alignment:
Q  703 acaaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||||||||||| |||||| |||||||  ||||||||||||||||    
T  18465621 acaaaagttattatgcataagacatttcattatgcatcctgcataaacacttca 18465568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 699 - 752
Target Start/End: Original strand, 30783432 - 30783485
Alignment:
Q  699 tgggacaaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    |||| ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  30783432 tggggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 30783485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 3884099 - 3884051
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  3884099 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 3884051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 896 - 979
Target Start/End: Complemental strand, 30408765 - 30408683
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| |   |||||| || ||  | |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  30408765 aaaaccattacacaataagtatggttttacctagtacactatcaaaaccattataccatacttat-ggtttcagtattccatac 30408683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 933 - 979
Target Start/End: Complemental strand, 30407720 - 30407675
Alignment:
Q  933 actatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  30407720 actatcaaaaccattataccatacttat-ggtttcagtattccatac 30407675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 933 - 979
Target Start/End: Complemental strand, 30407921 - 30407876
Alignment:
Q  933 actatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  30407921 actatcaaaaccattataccatacttat-ggtttcagtattccatac 30407876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 933 - 979
Target Start/End: Complemental strand, 30408123 - 30408078
Alignment:
Q  933 actatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  30408123 actatcaaaaccattataccatacttat-ggtttcagtattccatac 30408078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 933 - 979
Target Start/End: Complemental strand, 30408928 - 30408883
Alignment:
Q  933 actatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  30408928 actatcaaaaccattataccatacttat-ggtttcagtattccatac 30408883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Complemental strand, 30407720 - 30407683
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  30407720 actatcaaaaccattataccatacttatggtttcagta 30407683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Complemental strand, 30407921 - 30407884
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  30407921 actatcaaaaccattataccatacttatggtttcagta 30407884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Complemental strand, 30408123 - 30408086
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  30408123 actatcaaaaccattataccatacttatggtttcagta 30408086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Complemental strand, 30408728 - 30408691
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  30408728 actatcaaaaccattataccatacttatggtttcagta 30408691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Complemental strand, 30408928 - 30408891
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  30408928 actatcaaaaccattataccatacttatggtttcagta 30408891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 230; Significance: 1e-126; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 704 - 985
Target Start/End: Original strand, 1606 - 1886
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| | |||| |||||||    
T  1606 caaaaattattatgcataagtcatttccttatgcaccctgcataaacacttcacaaaaccattagacaattattttggtttctcataaaagaatatcaaa 1705  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1706 accattaaaccataattatggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataatactttcattaaaaaccat 1805  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  1806 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccataccttgaa 1886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-125; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 702 - 985
Target Start/End: Original strand, 32232991 - 32233273
Alignment:
Q  702 gacaaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatca 801  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||    
T  32232991 gacaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaaaccattagacaattattttggtttctcatagaagactatca 32233090  T
Q  802 aaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaacc 901  Q
    ||||||||| ||||||||||  ||||| |||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32233091 aaaccattaaaccataattatagtttcggtaataattcaagtgtatatcatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaatc 32233190  T
Q  902 attacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32233191 attacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccataccatgaa 32233273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 707 - 937
Target Start/End: Original strand, 41568836 - 41569064
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaacc 806  Q
    |||||||||||||||||||| ||||||||||||  |||||||| |||||| |||| |||||||||||      ||||||||| ||||||||||||||| |    
T  41568836 aagttattatgcataagtcaattccttatgcaccatgcataaatacttcacaaaaccattagacaat------ggtttctcatagaagactatcaaaatc 41568929  T
Q  807 attataccataattacggtttcagtaataatttcagtgtataacatcttaatc----attatttaaaaccatgtaacaataataatttcattaaaaacca 902  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    ||||||||||| |||||||||||||||||||||||||||||||    
T  41568930 attaaaccataattacggtttcagtaataattttaatgtataacatcttaatcgatcattatttaaaatcatgtaacaataataatttcattaaaaacca 41569029  T
Q  903 ttacacaattatcttggtttcacatacaagactat 937  Q
    ||||||||||||||| |||||||||||||||||||    
T  41569030 ttacacaattatcttagtttcacatacaagactat 41569064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 861 - 931
Target Start/End: Original strand, 51452934 - 51453004
Alignment:
Q  861 ttatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaa 931  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||||    
T  51452934 ttatttaaaatcatgtaacaataataatttcattaaaaaccattacacaattattttagttttagatacaa 51453004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 53281396 - 53281469
Alignment:
Q  319 gacgagaaagagagaggagcaccaacggccggccatcaaagggaggggtggggcgaaggacaaggatgaggcgg 392  Q
    ||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||| |||||||| |||||    
T  53281396 gacgagaaagagagaggaggaccaacggtcagccatcaaagggagaggtggggcgaagggcaaggatgcggcgg 53281469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 704 - 755
Target Start/End: Complemental strand, 51682066 - 51682015
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttc 755  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51682066 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttc 51682015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 23755287 - 23755339
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  23755287 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttca 23755339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 47728390 - 47728442
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  47728390 caaaagttattatgcataagtcattttcttatgcaccctgcataaacacttca 47728442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 11974888 - 11974986
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  11974888 ataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 11974986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 37319522 - 37319472
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  37319522 aaagttattatgcataagtcattttcttatgcaccctgcataaacacttca 37319472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Complemental strand, 40219377 - 40219300
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| |||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  40219377 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttcagtaata 40219300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 40219377 - 40219301
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| || ||||  ||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||    
T  40219377 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttat-ggtttcagtaat 40219301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Complemental strand, 40219578 - 40219501
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| |||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  40219578 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttcagtaata 40219501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 40219578 - 40219502
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| || ||||  ||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||    
T  40219578 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttat-ggtttcagtaat 40219502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Complemental strand, 40219779 - 40219702
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| |||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  40219779 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttcagtaata 40219702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 40219779 - 40219703
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| || ||||  ||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||    
T  40219779 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttat-ggtttcagtaat 40219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Complemental strand, 40219980 - 40219903
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| |||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  40219980 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttcagtaata 40219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 40219980 - 40219904
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| || ||||  ||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||    
T  40219980 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttat-ggtttcagtaat 40219904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 11975058 - 11975156
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  11975058 ataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaatcatacttat-ggtttcagtattccatacc 11975156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 11975228 - 11975326
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  11975228 ataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-agtttcagtattccatacc 11975326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 530 - 616
Target Start/End: Original strand, 14857883 - 14857966
Alignment:
Q  530 gtttgcgaaattaccaaaataccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgtgtatgaatcattttcctt 616  Q
    ||||||||||||||||| ||||||||||||||  ||| || ||||||||||||||  || ||||| ||| |||||||||||||||||    
T  14857883 gtttgcgaaattaccaatataccctgtcatat-ggggggtatacaagagtggtat--gagaaaggatgtctatgaatcattttcctt 14857966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 53594972 - 53595022
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  53594972 aaagttattatgcataagccattttcttatgcaccctgcataaacacttca 53595022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 23699329 - 23699381
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||    
T  23699329 caaaagttattatgcataagacattttcttatacaccctgcataaacacttca 23699381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 23717784 - 23717836
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||    
T  23717784 caaaagttattatgcataagacattttcttatacaccctgcataaacacttca 23717836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 23736240 - 23736292
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||    
T  23736240 caaaagttattatgcataagacattttcttatacaccctgcataaacacttca 23736292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 28300016 - 28299964
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||| ||||||||||||||||||||||||||| ||  |||||||||||||||    
T  28300016 caaaaattattatgcataagtcatttccttatgtaccatgcataaacacttca 28299964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 35575304 - 35575240
Alignment:
Q  487 ttgcagagaaggattggaaagagtgaaaggattgaaaagaaggg-tttgcgaaattaccaaaata 550  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||| ||||||    
T  35575304 ttgcagaggaggattggagagagtgaaaggattgaaaaaaagggatttgtgaaattactaaaata 35575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 706 - 754
Target Start/End: Complemental strand, 39195170 - 39195122
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacactt 754  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||    
T  39195170 aaagttattatgcataagtcatttcctcatgcaccctgcatgaacactt 39195122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 11975398 - 11975496
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||| ||||||||||| |||||||||| ||| ||||    
T  11975398 ataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattataccatacttat-ggtttcagtattccctacc 11975496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Original strand, 9106269 - 9106317
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  9106269 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 9106317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 26662602 - 26662554
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||| |||||||| |||||||||||||||  |||||||||||    
T  26662602 caaaagttattgtgcataagccatttccttatgcaccgtgcataaacac 26662554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 30947975 - 30947927
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  30947975 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 30947927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 33414077 - 33414029
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  33414077 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 33414029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 705 - 756
Target Start/End: Complemental strand, 41192413 - 41192362
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  ||||||||||||||||||||||||  | |||||||||||||    
T  41192413 aaaagttatggtgcataagtcatttccttatgcaccgtacataaacacttca 41192362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 705 - 756
Target Start/End: Complemental strand, 51846843 - 51846792
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  |||||||| |||||||||||||||  |||||||||||||||    
T  51846843 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacttca 51846792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 790 - 832
Target Start/End: Original strand, 11975445 - 11975487
Alignment:
Q  790 agaagactatcaaaaccattataccataattacggtttcagta 832  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||    
T  11975445 agaacactatcaaaaccattataccatacttatggtttcagta 11975487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 513 - 614
Target Start/End: Original strand, 45972403 - 45972504
Alignment:
Q  513 aaggattgaaaagaagg-gtttgcgaaattaccaaaataccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgtgtatgaatcattt 611  Q
    |||||||||||| || | |||||  |||||| |||||||||||| || ||| |||||| || || ||||||||| | |||||| ||| ||||||||||||    
T  45972403 aaggattgaaaaaaaagtgtttgtaaaattatcaaaataccctgccagataggggtgtatagaaaagtggtatgtg-aaaaggatgtttatgaatcattt 45972501  T
Q  612 tcc 614  Q
    |||    
T  45972502 tcc 45972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 906 - 947
Target Start/End: Original strand, 11975650 - 11975691
Alignment:
Q  906 cacaattatcttggtttcacatacaagactatcaaaaccatt 947  Q
    ||||||||| |||||||||||||||||| |||| ||||||||    
T  11975650 cacaattattttggtttcacatacaagaatatcgaaaccatt 11975691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 704 - 985
Target Start/End: Complemental strand, 6797449 - 6797170
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||    
T  6797449 caaaagttattatgcataagtcatttccttatgcatcctgcataaacacttcacaaaattattagacaattattttggtttctcataaaagactatcaaa 6797350  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6797349 accattaaaccataattatggtttcagtaatagtttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 6797250  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  6797249 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatac-tat-ggtttcagtaatccataccctgaa 6797170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 704 - 985
Target Start/End: Complemental strand, 45402934 - 45402654
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||||||| | |||| |||||||| ||||||||||||||||| | ||||||||||||    
T  45402934 caaaagttattatgcataagttatttccttatgcacccagcataaacactttacaaaaccattagactattattttggtttctcataaaagactatcaaa 45402835  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45402834 accattaaaccataattatggtttcaataataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaatcat 45402735  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  45402734 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccataccctgaa 45402654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 742 - 941
Target Start/End: Complemental strand, 21406055 - 21405858
Alignment:
Q  742 tgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttca 841  Q
    ||||||||||||||| ||||  |||| | |||||||||||||||| | ||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  21406055 tgcataaacacttcacaaaactatta-ataattattttggtttcttatagaagactatcaaaaccattaaaccataattatgatttcagtaataatttca 21405957  T
Q  842 gtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaa 941  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  21405956 gtgtataacatcttaatcattatttaaagtcatgtaataataataatttcatt-aaaaccattacataattatcttggtttcacatacaagactatcaaa 21405858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 758 - 874
Target Start/End: Original strand, 12283286 - 12283402
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||||||||||||| ||  ||||||| |||||||||||| | |||| ||| |||||||||||||||||||||||||||||||||||    
T  12283286 aaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaaatcatacttatggtttcagtaataatttcagtgtataacatcttaa 12283385  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  12283386 tcattatttaaaaccat 12283402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 874
Target Start/End: Original strand, 10564157 - 10564273
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||||||||||||| ||  | ||||| ||||||||||||   |||| ||| |||||||||||||||||||||||||||||| ||||    
T  10564157 aaaaccattagacaattattttggtttcacattgtagactgtcaaaaccattaagtcatacttatggtttcagtaataatttcagtgtataacattttaa 10564256  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  10564257 tcattatttaaaaccat 10564273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 874
Target Start/End: Original strand, 12283395 - 12283511
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||| |||||||| |||||||| || | || ||| |||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  12283395 aaaaccattacacaattatcttggtttcacatacaatactgtcaaaatcattaaaccatacttatggtttcagtaataatttcagtgtataacatcttaa 12283494  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  12283495 tcattatttaaaaccat 12283511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 874
Target Start/End: Original strand, 12283504 - 12283620
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||| |||||||| |||||||| || | || ||| |||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||    
T  12283504 aaaaccattacacaattatcttggtttcacatacaatactgtcaaaaccattaaaccatacttatggtttcggtaataatttcagtgtataacatcttaa 12283603  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  12283604 tcattatttaaaaccat 12283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 12283504 - 12283570
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  12283504 aaaaccattacacaattatcttggtttcacatacaatactgtcaaaaccattaaaccatacttatgg 12283570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 12283395 - 12283471
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||    
T  12283395 aaaaccattacacaattatcttggtttcacatacaatactgtcaaaatcattaaaccatacttat-ggtttcagtaat 12283471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 10564266 - 10564332
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  10564266 aaaaccattacacatttatcttggtttcacatacaatactatcaaaaccattaaatcatacttatgg 10564332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 896 - 977
Target Start/End: Original strand, 10564649 - 10564729
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccat 977  Q
    ||||||||||||||||  |  ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  10564649 aaaaccattacacaatatttatggtttcacatacaatactatcaaaaccattaaaccatacttat-ggtttcagtaatccat 10564729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 291 - 382
Target Start/End: Complemental strand, 7744760 - 7744670
Alignment:
Q  291 ggtgatgaaggaggtggtggtggaggccgacgagaaagagagaggagcaccaacggccggccatcaaagggaggggtggggcgaaggacaag 382  Q
    ||||||||||| |||||||||||  ||||||||||| |||||||||| || || ||||||||||||||| ||||||||||||||||| ||||    
T  7744760 ggtgatgaaggtggtggtggtggtagccgacgagaa-gagagaggaggacaaagggccggccatcaaagagaggggtggggcgaagggcaag 7744670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 869 - 980
Target Start/End: Complemental strand, 13420730 - 13420620
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| |||||||||||||| | ||||||||||||| || |   |||||| ||||| || |||||||||||||||| ||||||||||| |||||||    
T  13420730 aaccatgtaccaataataatttcacttaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattacaccatacttat-ggtttca 13420632  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  13420631 gtattccatacc 13420620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 10563831 - 10563907
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||| |||||||||||||||||||||||||||  || |||||||||||| ||||||||||||||| ||||||||||||    
T  10563831 aaaatcattacacaattatcttggtttcacatttaatactatcaaaaccgttaaaccatacttat-ggtttcagtaat 10563907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 12283083 - 12283159
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||||  |||||||||||    
T  12283083 aaaaccattagacaattatgttggtttcacatagaacactatcaaaaccattaaaccatacttat-agtttcagtaat 12283159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 10564458 - 10564524
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||||||||||  |  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  10564458 aaaaccattacacaatatttatggtttcacatacaatactatcaaaaccattaaaccatacttatgg 10564524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 12283286 - 12283362
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| ||||||||||||  |||||| |||||||||||||| ||||||||| ||||||||||||    
T  12283286 aaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaaatcatacttat-ggtttcagtaat 12283362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 872 - 980
Target Start/End: Complemental strand, 13420526 - 13420419
Alignment:
Q  872 catgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagta 971  Q
    |||||| |||||||||||||| | ||||||||||||| || |   |||||| ||| | || ||||||||||||||| |||||||||||| ||||||||||    
T  13420526 catgtaccaataataatttcacttaaaaccattacaccataagtatggttttacaaagaacactatcaaaaccattcaaccatacttat-ggtttcagta 13420428  T
Q  972 atccatacc 980  Q
     ||||||||    
T  13420427 ttccatacc 13420419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 39007713 - 39007661
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39007713 caaaggttattatgcataagtcatttccttatgcaccctgcataaacacttca 39007661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 44141315 - 44141263
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  44141315 caaaagttatcatgcataagtcatttccttatgcaccctgcataaacacttca 44141263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 758 - 837
Target Start/End: Original strand, 12283083 - 12283162
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataat 837  Q
    |||| |||||||||||||| |||||||| || |||| |||||||||||||||| |||||| |||  ||||||||||||||    
T  12283083 aaaaccattagacaattatgttggtttcacatagaacactatcaaaaccattaaaccatacttatagtttcagtaataat 12283162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 34875493 - 34875543
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  34875493 aaagttattatgcataagccatttccttatgcaccctgcataaacacttca 34875543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 897 - 962
Target Start/End: Original strand, 10564554 - 10564619
Alignment:
Q  897 aaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||||  |  ||||||||||||||| | ||||||||||||||||||||||||||||    
T  10564554 aaaccattacacaatatttatggtttcacatacaataatatcaaaaccattaaaccatacttatgg 10564619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 5757388 - 5757440
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  5757388 caaaagttattatgcataagacatttccttatgcaccgtgcataaacacttca 5757440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 12543185 - 12543273
Alignment:
Q  291 ggtgatgaaggaggtggtggtggaggccgacgagaaagagagaggagcaccaacggccggccatcaaagggaggggtggggcgaaggacaag 382  Q
    ||||||||||| |||||||||||  |||||||| ||||||||||||| || ||| | |||||||||||  ||||||||||||||||| ||||    
T  12543185 ggtgatgaaggtggtggtggtggcagccgacga-aaagagagaggaggacaaacagtcggccatcaaa--gaggggtggggcgaagggcaag 12543273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 4721108 - 4721010
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| |||||  | |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  4721108 ataataaattcatctaaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 4721010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 701 - 756
Target Start/End: Complemental strand, 46346783 - 46346728
Alignment:
Q  701 ggacaaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  46346783 ggacaaaagttattatgcataagtcattttcttatgcatcctgtataaacacttca 46346728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 848
Target Start/End: Original strand, 10564266 - 10564356
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtata 848  Q
    |||| ||||| ||| |||| |||||||| || | || |||||||||||||||| | |||| ||| |||||||| |||||||||||||||||    
T  10564266 aaaaccattacacatttatcttggtttcacatacaatactatcaaaaccattaaatcatacttatggtttcagaaataatttcagtgtata 10564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 848
Target Start/End: Original strand, 10564458 - 10564548
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtata 848  Q
    |||| ||||| |||||  || ||||||| || | || |||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||    
T  10564458 aaaaccattacacaatatttatggtttcacatacaatactatcaaaaccattaaaccatacttatggtttcagtcataatttcagtgtata 10564548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 10564157 - 10564233
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| ||||||||||||   ||||| |||||||||||||  ||||||||| ||||||||||||    
T  10564157 aaaaccattagacaattattttggtttcacattgtagactgtcaaaaccattaagtcatacttat-ggtttcagtaat 10564233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 917 - 962
Target Start/End: Original strand, 10564383 - 10564428
Alignment:
Q  917 tggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  10564383 tggtttcacatacaatattatcaaaaccattaaaccatacttatgg 10564428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 880 - 924
Target Start/End: Original strand, 16931963 - 16932007
Alignment:
Q  880 aataataatttcattaaaaaccattacacaattatcttggtttca 924  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||    
T  16931963 aataataattttattaaaaactattacacaattatcttggtttca 16932007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 880 - 924
Target Start/End: Original strand, 16937346 - 16937390
Alignment:
Q  880 aataataatttcattaaaaaccattacacaattatcttggtttca 924  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||    
T  16937346 aataataattttattaaaaactattacacaattatcttggtttca 16937390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 506 - 614
Target Start/End: Complemental strand, 21774156 - 21774052
Alignment:
Q  506 agagtgaaaggattgaaaagaagggtttgcgaaattaccaaaataccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgtgtatgaa 605  Q
    ||||||||||||||||| | ||||||||| |||| ||||||||| |||| ||  ||  |||||||||||| ||||||||||| | |||||||| ||||||    
T  21774156 agagtgaaaggattgaaga-aagggtttgtgaaaataccaaaatgccct-tctaatg-gggtgtgtacaaaagtggtatggg-acaagggtgtttatgaa 21774061  T
Q  606 tcattttcc 614  Q
    |||||||||    
T  21774060 tcattttcc 21774052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 797 - 848
Target Start/End: Original strand, 10564592 - 10564643
Alignment:
Q  797 tatcaaaaccattataccataattacggtttcagtaataatttcagtgtata 848  Q
    |||||||||||||| |||||| ||| ||||||||| ||||||||||||||||    
T  10564592 tatcaaaaccattaaaccatacttatggtttcagtcataatttcagtgtata 10564643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 10563831 - 10563908
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||||||||| |||||||| |||||||| ||   || |||||||||||| ||| |||||| ||| |||||||||||||    
T  10563831 aaaatcattacacaattatcttggtttcacatttaatactatcaaaaccgttaaaccatacttatggtttcagtaata 10563908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 699 - 752
Target Start/End: Complemental strand, 16933313 - 16933260
Alignment:
Q  699 tgggacaaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    |||| ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  16933313 tggggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 16933260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 699 - 752
Target Start/End: Complemental strand, 16938696 - 16938643
Alignment:
Q  699 tgggacaaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    |||| ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  16938696 tggggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 16938643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 909 - 961
Target Start/End: Complemental strand, 21406027 - 21405975
Alignment:
Q  909 aattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatg 961  Q
    |||||| ||||||||  ||| |||||||||||||||||||||||||| |||||    
T  21406027 aattattttggtttcttatagaagactatcaaaaccattaaaccataattatg 21405975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 27335692 - 27335641
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||  ||||||||||| ||||||||| ||||||||||||||||    
T  27335692 caaaagttattataaataagtcattttcttatgcac-ctgcataaacacttca 27335641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 704 - 739
Target Start/End: Original strand, 924427 - 924462
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcac 739  Q
    ||||| ||||||||||||||||||||||||||||||    
T  924427 caaaaattattatgcataagtcatttccttatgcac 924462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 797 - 848
Target Start/End: Original strand, 10564401 - 10564452
Alignment:
Q  797 tatcaaaaccattataccataattacggtttcagtaataatttcagtgtata 848  Q
    |||||||||||||| |||||| ||| |||||| || ||||||||||||||||    
T  10564401 tatcaaaaccattaaaccatacttatggtttcggtcataatttcagtgtata 10564452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 705 - 756
Target Start/End: Complemental strand, 11732710 - 11732659
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  |||||||| ||||| |||||||||| |||||||||||||||    
T  11732710 aaaagttatggtgcataagccattttcttatgcactgtgcataaacacttca 11732659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 896 - 927
Target Start/End: Original strand, 12283613 - 12283644
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacat 927  Q
    ||||||||||||||||||||||||||||||||    
T  12283613 aaaaccattacacaattatcttggtttcacat 12283644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 705 - 756
Target Start/End: Original strand, 24359874 - 24359925
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  ||||||||||||||||||||||||  ||||| |||||||||    
T  24359874 aaaagttatggtgcataagtcatttccttatgcaccgtgcatcaacacttca 24359925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 566 - 619
Target Start/End: Original strand, 44570123 - 44570175
Alignment:
Q  566 gtgtgtacaagagtggtatgggaaaaagggtgtgtatgaatcattttccttgtt 619  Q
    |||||||||| ||||||||||  ||| |||||| ||||||||||||||||||||    
T  44570123 gtgtgtacaaaagtggtatggctaaa-gggtgtttatgaatcattttccttgtt 44570175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 223; Significance: 1e-122; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 704 - 962
Target Start/End: Original strand, 51361 - 51619
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||    
T  51361 caaaaattattatgcataagtcattttcttatgcaccctgcataaacacttcacaaaaccattagacaattattttggtttctcatataagactatcaaa 51460  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51461 accattaaaccataattatggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 51560  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51561 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 51619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 757 - 834
Target Start/End: Original strand, 51552 - 51629
Alignment:
Q  757 aaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaat 834  Q
    ||||| ||||| |||||||| |||||||| || | ||||||||||||||||||| |||||| ||| |||||| |||||    
T  51552 aaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggtttcggtaat 51629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 222; Significance: 1e-121; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 704 - 985
Target Start/End: Original strand, 119204 - 119484
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||    
T  119204 caaaagttattatacataagtcatttctatatgcaccctgcataaacacttcacaaaaccattagacaattattttggtttctcatataagactatcaaa 119303  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  119304 accattaaaccataattatggtttcagtaataatttcagtatataacatcttaatcattatttaaaactatgtaacaataataatttcattaaaaaccat 119403  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  119404 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccataccctgaa 119484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 222; Significance: 1e-121; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 704 - 985
Target Start/End: Original strand, 209328 - 209608
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||| | ||||||||||||    
T  209328 caaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaaaacaattagacaattattttggtttctcatataagactatcaaa 209427  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  209428 accattaaaccataattattgtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 209527  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  209528 tacacaattatcttggtttcacatacaagattatcaaaaccattaaactatacttat-ggtttcagtaatccataccctgaa 209608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 704 - 821
Target Start/End: Original strand, 171507 - 171624
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||    
T  171507 caaaaattattatgcataagtcatttccttatgcaccctgtataaacacttcacaaaaccattagacaattattttggtttctcatataagactatcaaa 171606  T
Q  804 accattataccataatta 821  Q
    ||||||| ||||||||||    
T  171607 accattaaaccataatta 171624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 896 - 960
Target Start/End: Original strand, 171561 - 171625
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat 960  Q
    |||||||||| |||||||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  171561 aaaaccattagacaattattttggtttctcatataagactatcaaaaccattaaaccataattat 171625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 215; Significance: 1e-117; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 707 - 985
Target Start/End: Complemental strand, 2848170 - 2847894
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaacc 806  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||| | |||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  2848170 aagttattatgcataagtcagttccttatgcaccctgcataaatactttacaaaaccattagacaattattttagtttctcatagaagactatcaaaacc 2848071  T
Q  807 attataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattac 906  Q
    |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2848070 attaaac-ataattatggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaatcattac 2847972  T
Q  907 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  2847971 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat-ggtttcagtaatccataccctgaa 2847894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 711 - 941
Target Start/End: Original strand, 34986252 - 34986481
Alignment:
Q  711 tattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaaccatta 810  Q
    |||||||||||||||| | | |||||||| || ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  34986252 tattatgcataagtcagt-cattatgcaccctacataaacacttcacaaaaccattagacaattattttggtttctcatagaagactatcaaaaccatta 34986350  T
Q  811 taccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaa 910  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34986351 aaccataattatggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaa 34986450  T
Q  911 ttatcttggtttcacatacaagactatcaaa 941  Q
    |||||||||||||||||||||||||||||||    
T  34986451 ttatcttggtttcacatacaagactatcaaa 34986481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 736 - 985
Target Start/End: Complemental strand, 20588276 - 20588028
Alignment:
Q  736 gcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||| |||||||||||| ||||  ||| || |||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||| |||||    
T  20588276 gcaccctgtataaacacttcacaaaactatttgataattattttggtttctcatagaagactatcaaaaccattaaatcataattatggtttcactaata 20588177  T
Q  836 atttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagact 935  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  20588176 gtttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataattttattaaaaatcattacacaattatcttggtttcacatacaagact 20588077  T
Q  936 atcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20588076 atcaaaaccattaaaccatacttat-ggtttcagtaatccataccctgaa 20588028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 758 - 973
Target Start/End: Complemental strand, 9561274 - 9561060
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||||||||||||| ||  ||||| |||||||||||||| | |||| ||| ||||||||||||||||| |||||||||||| ||||    
T  9561274 aaaaccattagacaattattttggtttcacattgaagattatcaaaaccattaaatcatacttatggtttcagtaataattttagtgtataacatgttaa 9561175  T
Q  858 tcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    ||||||||||||| |||||| |||||||||||||||| |||| ||||| |||||||| ||||||||| |||||||| |||||||| ||||||||||||||    
T  9561174 tcattatttaaaatcatgtaccaataataatttcatttaaaaacattagacaattattttggtttcatatacaagaatatcaaaatcattaaaccatact 9561075  T
Q  958 tatgggtttcagtaat 973  Q
    ||| ||||||||||||    
T  9561074 tat-ggtttcagtaat 9561060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 758 - 870
Target Start/End: Complemental strand, 9561136 - 9561024
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| |||||||||||||||||||||||  | | |||| |||||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  9561136 aaaaacattagacaattattttggtttcatatacaagaatatcaaaatcattaaaccatacttatggtttcagtaataatttcagtgtataacatcttaa 9561037  T
Q  858 tcattatttaaaa 870  Q
    |||||||||||||    
T  9561036 tcattatttaaaa 9561024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 897 - 961
Target Start/End: Complemental strand, 1701195 - 1701131
Alignment:
Q  897 aaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatg 961  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  1701195 aaaccattacacaattatcttagttttacatacaacactatcaaaaccattaaaccatacttatg 1701131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 34986298 - 34986374
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| |||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  34986298 aaaaccattagacaattattttggtttctcatagaagactatcaaaaccattaaaccataattat-ggtttcagtaat 34986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 55780302 - 55780378
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||  ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  55780302 aaaaccattagacaattagtttggtttcacatagaatactatcaaaaccattaaaccatacttat-ggtttcagtaat 55780378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 55844482 - 55844558
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||  ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  55844482 aaaaccattagacaattagtttggtttcacatagaatactatcaaaaccattaaaccatacttat-ggtttcagtaat 55844558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 24686574 - 24686626
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24686574 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 24686626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 25574192 - 25574140
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25574192 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 25574140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 808833 - 808735
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  808833 ataataatttcatctaaaaccattacaccataagtatggttttacatataatactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 808735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 809204 - 809106
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  809204 ataataatttcatctaaaaccattacaccataagtatggttttacatataatactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 809106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 809745 - 809647
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  809745 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 513 - 616
Target Start/End: Complemental strand, 42845398 - 42845296
Alignment:
Q  513 aaggattgaaaagaagggtttgcgaaattaccaaaataccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgtgtatgaatcatttt 612  Q
    |||||||||||| ||| ||||||||||||||||||||||| ||  | ||| |||| | || || ||||||||||| |||||||||| |||||||||||||    
T  42845398 aaggattgaaaaaaagtgtttgcgaaattaccaaaataccttgctagataggggtatatagaaaagtggtatggg-aaaagggtgtttatgaatcatttt 42845300  T
Q  613 cctt 616  Q
    ||||    
T  42845299 cctt 42845296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 9561659 - 9561583
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    ||||| |||| |||||||| ||| ||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  9561659 aaaactattagacaattattttgatttcacatagaacactatcaaaaccattaaaccatacttat-ggtttcagtaat 9561583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 55780302 - 55780379
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  55780302 aaaaccattagacaattagtttggtttcacatagaatactatcaaaaccattaaaccatacttatggtttcagtaata 55780379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 55844482 - 55844559
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  55844482 aaaaccattagacaattagtttggtttcacatagaatactatcaaaaccattaaaccatacttatggtttcagtaata 55844559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 884 - 980
Target Start/End: Complemental strand, 810113 - 810018
Alignment:
Q  884 ataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  810113 ataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 810018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 869 - 980
Target Start/End: Complemental strand, 809046 - 808936
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| | ||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| ||||| |    
T  809046 aaccatgtaccgataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttta 808948  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  808947 gtattccatacc 808936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 869 - 980
Target Start/End: Complemental strand, 809587 - 809477
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| | ||||||| |||||  ||||||||||||  || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||    
T  809587 aaccatgtaccgataataaattcatctaaaaccattacatcataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttca 809489  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  809488 gtattccatacc 809477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 764 - 835
Target Start/End: Complemental strand, 9561653 - 9561582
Alignment:
Q  764 attagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    ||||||||||||||||| |||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  9561653 attagacaattattttgatttcacatagaacactatcaaaaccattaaaccatacttatggtttcagtaata 9561582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 896 - 962
Target Start/End: Complemental strand, 810302 - 810236
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| |||||||  |||||||||||||  | ||||||||||||||||||||||||||||||    
T  810302 aaaaccattagacaattagtttggtttcacataggacactatcaaaaccattaaaccatacttatgg 810236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 16298925 - 16298975
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  16298925 aaagttattatgcataagtcatttccttatgcaccctgcataatcacttca 16298975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 809405 - 809307
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| ||  ||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  809405 ataataatttcatctaaaaccattacaccataagtatggttttacatataattctatcaaaatcattaaaccatacttat-ggtttcagtattccatacc 809307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 869 - 980
Target Start/End: Complemental strand, 809958 - 809848
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| | ||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||| ||||||||||||||||| ||||| |    
T  809958 aaccatgtaccgataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaatcattaaaccatacttat-ggtttta 809860  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  809859 gtattccatacc 809848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 54754306 - 54754404
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| |||||  | |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  54754306 ataataaattcatctaaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 54754404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 521 - 615
Target Start/End: Original strand, 48546137 - 48546230
Alignment:
Q  521 aaaagaagggtttgcgaaattaccaaaataccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgtgtatgaatcattttcct 615  Q
    |||||||| |||||| ||||||||||||||||||| || ||| |||||| || || |||| ||| | ||||| ||||| ||||||||||||||||    
T  48546137 aaaagaagtgtttgctaaattaccaaaataccctgccagataggggtgtatagaaaagtgatat-gaaaaaacggtgtttatgaatcattttcct 48546230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 38010145 - 38010195
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  38010145 aaagttatggtgcataagtcatttccttatgcaccatgcataaacacttca 38010195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 869 - 979
Target Start/End: Original strand, 54757664 - 54757773
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    |||||| || ||||||||||||   | ||||||||||||| || |   |||||| || || || |||||||||||||||| ||||||||||| |||||||    
T  54757664 aaccatttaccaataataattttgatcaaaaccattacaccataagtatggttttacctagaacactatcaaaaccattataccatacttat-ggtttca 54757762  T
Q  969 gtaatccatac 979  Q
    ||| |||||||    
T  54757763 gtattccatac 54757773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 758 - 827
Target Start/End: Complemental strand, 810302 - 810233
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggttt 827  Q
    |||| ||||||||||||| ||||||||| || || | |||||||||||||||| |||||| ||| |||||    
T  810302 aaaaccattagacaattagtttggtttcacataggacactatcaaaaccattaaaccatacttatggttt 810233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 897 - 953
Target Start/End: Complemental strand, 9561527 - 9561471
Alignment:
Q  897 aaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaacca 953  Q
    ||||||||| |||||| | ||  ||||||||||||| ||||||||||||||||||||    
T  9561527 aaaccattagacaattctttttctttcacatacaagtctatcaaaaccattaaacca 9561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 10472499 - 10472551
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||| ||||    
T  10472499 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttca 10472551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 13635789 - 13635741
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  13635789 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 13635741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 49492576 - 49492528
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  49492576 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 49492528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Original strand, 55765483 - 55765531
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  55765483 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 55765531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 705 - 756
Target Start/End: Original strand, 30357810 - 30357861
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  | ||||||||||||||||||||||  |||||||||||||||    
T  30357810 aaaagttatggttcataagtcatttccttatgcaccgtgcataaacacttca 30357861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 896 - 979
Target Start/End: Original strand, 54756887 - 54756969
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| |   |||||| || ||  | |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  54756887 aaaaccattacacaataagtatggttttacctagtacactatcaaaaccattataccatacttat-ggtttcagtattccatac 54756969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 43852682 - 43852633
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||| |||||||||  |||||||| ||||||    
T  43852682 aaagttattatgcataagtcattttcttatgcac-atgcataaatacttca 43852633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 539 - 585
Target Start/End: Complemental strand, 49863103 - 49863058
Alignment:
Q  539 attaccaaaataccctgtcatataagggtgtgtacaagagtggtatg 585  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||||    
T  49863103 attaccaaaataccctctcatat-agggtgtgtacaagaatggtatg 49863058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 51768148 - 51768114
Alignment:
Q  156 actcataaactcattgtcttaaggtttagggtaaa 190  Q
    ||||||||||||||||||||||||||| |||||||    
T  51768148 actcataaactcattgtcttaaggttttgggtaaa 51768114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 933 - 979
Target Start/End: Original strand, 54756723 - 54756768
Alignment:
Q  933 actatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  54756723 actatcaaaaccattataccatacttat-ggtttcagtattccatac 54756768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 933 - 979
Target Start/End: Original strand, 54757527 - 54757572
Alignment:
Q  933 actatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  54757527 actatcaaaaccattataccatacttat-ggtttcagtattccatac 54757572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 790 - 832
Target Start/End: Original strand, 54757723 - 54757765
Alignment:
Q  790 agaagactatcaaaaccattataccataattacggtttcagta 832  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||    
T  54757723 agaacactatcaaaaccattataccatacttatggtttcagta 54757765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 931 - 980
Target Start/End: Complemental strand, 9561001 - 9560953
Alignment:
Q  931 agactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  9561001 agactatcaaaaccattaaaccatattta-cgatttcagtaatccatacc 9560953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 793 - 834
Target Start/End: Complemental strand, 9561001 - 9560960
Alignment:
Q  793 agactatcaaaaccattataccataattacggtttcagtaat 834  Q
    |||||||||||||||||| |||||| ||||| ||||||||||    
T  9561001 agactatcaaaaccattaaaccatatttacgatttcagtaat 9560960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 12105289 - 12105347
Alignment:
Q  405 tggtggtggtaaaggagtgtggatgatgtggtgatgagatagagaggagtgagagagatct 465  Q
    |||||||||| |||||||||||| | ||||||| |||||||||||  ||||||||| ||||    
T  12105289 tggtggtggttaaggagtgtggaggttgtggtggtgagatagaga--agtgagagaaatct 12105347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Original strand, 54756723 - 54756760
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  54756723 actatcaaaaccattataccatacttatggtttcagta 54756760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Original strand, 54756924 - 54756961
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  54756924 actatcaaaaccattataccatacttatggtttcagta 54756961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Original strand, 54757527 - 54757564
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  54757527 actatcaaaaccattataccatacttatggtttcagta 54757564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 704 - 985
Target Start/End: Original strand, 450204 - 450483
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  450204 caaaagttattatgcataagtcatttccttatacaccttgcataaacacttcataaaaccattagacaattattttggtttctcatagaagactatcaaa 450303  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccat 903  Q
    | ||||| |||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  450304 atcattaaaccataattatggtt-cagtaataattttagtgtataacatcttaatcattatttaaaacaatgtaacaataataatttcattaaaaaccat 450402  T
Q  904 tacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| |||||| ||||    
T  450403 tacacaattatcttggtttcacatacaagactatcaaaaccattaaatcatacttat-gatttcagtaattcataccctgaa 450483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 195; Significance: 1e-105; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 707 - 985
Target Start/End: Complemental strand, 7403 - 7126
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaacc 806  Q
    |||||||||||||||| |||  ||||||||||| |||||||||||||||| |||| |||| || |||||||||||||||||| ||||| |||||||||||    
T  7403 aagttattatgcataaatcagatccttatgcaccctgcataaacacttcacaaaaccatttgataattattttggtttctcatagaaggctatcaaaacc 7304  T
Q  807 attataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattac 906  Q
    |||| | |||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  7303 attaaatcataattatggtttcactaataatttcagtgtataacatcttaatcactatttaaaaccatgtaacaataataattttattaaaaaccattac 7204  T
Q  907 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||    
T  7203 acaattatcttggtttcacatacaagactatcaaaacaattaaaccatacttat-ggtttcagtaattcataccctgaa 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 5e-96; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 5e-96
Query Start/End: Original strand, 707 - 941
Target Start/End: Complemental strand, 24024685 - 24024451
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaacc 806  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  24024685 aagttattatgcataagtcaattccttatgcaccatgcataaacacttcacaaaaccattagacaattattttggtttctcatagaagattatcaaaacc 24024586  T
Q  807 attataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattac 906  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24024585 attaaaccataattatggtttcagtaataatttcagtgtataacatcttaatcattatttaaaactatgtaacaataataatttcattaaaaaccattac 24024486  T
Q  907 acaattatcttggtttcacatacaagactatcaaa 941  Q
    |||||||| || || |||||||||| |||||||||    
T  24024485 acaattatgttagtatcacatacaaaactatcaaa 24024451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 824 - 980
Target Start/End: Original strand, 28056122 - 28056277
Alignment:
Q  824 gtttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttc 923  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||||||| || ||||||||||||| ||||||||||||||||||| |||||||     
T  28056122 gtttcagtaataatttcagtgtataatattttaatcattatttaaacccatgtaccattaataatttcatttaaaaccattacacaattatattggtttt 28056221  T
Q  924 acatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  28056222 acatacaagactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 28056277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 487 - 615
Target Start/End: Complemental strand, 17072330 - 17072206
Alignment:
Q  487 ttgcagagaaggattggaaagagtgaaaggattgaaaagaagggtttgcgaaattaccaaaataccctgtcatataagggtgtgtacaagagtggtatgg 586  Q
    |||||||  ||||||||| || |||||||||||||||| | ||||||||||||||||||| |||||||| |||||  ||| || ||||||||||||||||    
T  17072330 ttgcagatgaggattggagagggtgaaaggattgaaaata-gggtttgcgaaattaccaatataccctgccatat-ggggggtatacaagagtggtatgg 17072233  T
Q  587 gaaaaagggtgtgtatgaatcattttcct 615  Q
    |  ||||| ||| ||||||||||||||||    
T  17072232 g--aaaggatgtctatgaatcattttcct 17072206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 5098718 - 5098770
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5098718 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 5098770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 21173757 - 21173659
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  21173757 ataataatttcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 21173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 27970518 - 27970616
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27970518 ataataatttcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 27970616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 44348347 - 44348249
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  44348347 ataataatttcatctaaaaccattacaccataagtatggttttacataaaacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 44348249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 24024634 - 24024558
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| |||||||| |||| |||| ||||||||||||||||||||| |||| ||||||||||||    
T  24024634 aaaaccattagacaattattttggtttctcatagaagattatcaaaaccattaaaccataattat-ggtttcagtaat 24024558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 28048248 - 28048324
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    ||||||| || |||||||  ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  28048248 aaaaccactagacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacttat-ggtttcagtaat 28048324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 778 - 870
Target Start/End: Original strand, 30771316 - 30771409
Alignment:
Q  778 ttggtttctcagagaagactatcaaaaccattataccataattacggtttcagta-ataatttcagtgtataacatcttaatcattatttaaaa 870  Q
    |||||||| ||  ||||||| ||||||||||||  ||||| ||| |||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  30771316 ttggtttcacattgaagactgtcaaaaccattaagccatacttatggtttcagtctataatttcagtgtataacatcttaatcattattaaaaa 30771409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 25995288 - 25995340
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  25995288 caaaagttattatgcataagacatttccttatgcactctgcataaatacttca 25995340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 895 - 962
Target Start/End: Original strand, 30771406 - 30771473
Alignment:
Q  895 aaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||||| |||||||| ||||||||||||  |||||| ||||||||||||| ||||||||||||    
T  30771406 aaaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaagccatacttatgg 30771473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Original strand, 39548046 - 39548096
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  39548046 aaagttattatacataagtcatttccttatgcaccctgcataaacacttca 39548096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 766 - 835
Target Start/End: Original strand, 28048256 - 28048325
Alignment:
Q  766 tagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||||||||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  28048256 tagacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacttatggtttcagtaata 28048325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 756 - 841
Target Start/End: Original strand, 30771405 - 30771490
Alignment:
Q  756 aaaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttca 841  Q
    |||||| ||||||||||||||||||||||| ||  ||||||| ||||||||||||  ||||| ||| ||||| |||||| ||||||    
T  30771405 aaaaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaagccatacttatggttttagtaatgatttca 30771490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 962
Target Start/End: Complemental strand, 44348560 - 44348467
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||| | ||||||||||||   ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||||    
T  44348560 aaccatgtaccgataataatttcacctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatgg 44348467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 4281852 - 4281800
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  4281852 caaaagttattatgcataagacatttccttatgtactctgtataaacacttca 4281800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 21173587 - 21173489
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  21173587 ataataaattcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttat-ggtttcagtattccatacc 21173489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 27970135 - 27970245
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    |||||| || ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||| ||||||||||||||||||| |||| |||||||    
T  27970135 aaccatataccaataataaattcatctaaaaccattacaccataagtatggttttacatagaacactgtcaaaaccattaaaccatatttat-ggtttca 27970233  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  27970234 gtattccatacc 27970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 27970315 - 27970398
Alignment:
Q  879 caataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||||    
T  27970315 caataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatgg 27970398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 28056640 - 28056750
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    |||||| || ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||| ||||||||||||||||||| |||| |||||||    
T  28056640 aaccatataccaataataaattcatctaaaaccattacaccataagtatggttttacatagaacactgtcaaaaccattaaaccatatttat-ggtttca 28056738  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  28056739 gtattccatacc 28056750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 28056820 - 28056903
Alignment:
Q  879 caataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||||    
T  28056820 caataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatgg 28056903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 30767528 - 30767611
Alignment:
Q  879 caataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||||    
T  30767528 caataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatgg 30767611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 30771691 - 30771774
Alignment:
Q  879 caataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||||    
T  30771691 caataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatgg 30771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 44350871 - 44350773
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| |||||  | |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  44350871 ataataaattcatctaaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 44350773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 13081922 - 13081872
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||||||||||||||| |||||||| || |||||||||||||    
T  13081922 aaagttattatgcataagtcatttcattatgcaccctacataaacacttca 13081872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 707 - 756
Target Start/End: Complemental strand, 40853740 - 40853691
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  40853740 aagttattatgcataagccatttccttatgcatcctgcataaacacttca 40853691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 704 - 756
Target Start/End: Complemental strand, 36637001 - 36636949
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||| |||||| || || |||||||||||||    
T  36637001 caaaagttattatgcataagtcattttcttatgtaccctacataaacacttca 36636949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 906 - 954
Target Start/End: Complemental strand, 44347846 - 44347798
Alignment:
Q  906 cacaattatcttggtttcacatacaagactatcaaaaccattaaaccat 954  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  44347846 cacaattattttggtttcacatacaagaatatcgaaaccattaaaccat 44347798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 881 - 961
Target Start/End: Complemental strand, 44348718 - 44348638
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatg 961  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || ||||| |||||||||||||||||||||||    
T  44348718 ataataatttcatctaaaaccattacaccataagtatggttttacatagaacactattaaaaccattaaaccatacttatg 44348638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 710 - 756
Target Start/End: Complemental strand, 16142133 - 16142087
Alignment:
Q  710 ttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  16142133 ttattatgcacaagccatttccttatgcacgctgcataaacacttca 16142087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 832
Target Start/End: Original strand, 28056194 - 28056268
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagta 832  Q
    |||| ||||| |||||||| |||||||  || | ||||||||||||||||||| |||||| ||| ||||||||||    
T  28056194 aaaaccattacacaattatattggttttacatacaagactatcaaaaccattaaaccatacttatggtttcagta 28056268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 881 - 955
Target Start/End: Original strand, 28057023 - 28057097
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccata 955  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||    
T  28057023 ataataatttcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccata 28057097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 19315387 - 19315330
Alignment:
Q  539 attaccaaaataccctgtcatataagggtgtgtacaagagtggtatgggaaaaagggtgt 598  Q
    |||||||||||||||| ||| |||||| ||| |||||||||||||| |||||||||||||    
T  19315387 attaccaaaataccctctcacataagg-tgtatacaagagtggtat-ggaaaaagggtgt 19315330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 916 - 962
Target Start/End: Original strand, 30771316 - 30771362
Alignment:
Q  916 ttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||||||  |||||| ||||||||||||| ||||||||||||    
T  30771316 ttggtttcacattgaagactgtcaaaaccattaagccatacttatgg 30771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 702 - 751
Target Start/End: Original strand, 34464711 - 34464760
Alignment:
Q  702 gacaaaagttattatgcataagtcatttccttatgcactctgcataaaca 751  Q
    ||||||||||||  ||||||||| ||||||||||||||  ||||||||||    
T  34464711 gacaaaagttatggtgcataagttatttccttatgcaccgtgcataaaca 34464760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 2e-92; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 704 - 962
Target Start/End: Original strand, 32556346 - 32556606
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaa 803  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||  |||||||||||||||| |||| ||| |||||| |||||||    
T  32556346 caaaagttattatgcataagtcattttcttatgcaccctgcataaacaattcagaaaacgattagacaattattttagtttttcatagaagattatcaaa 32556445  T
Q  804 accattataccataattacggtttcagtaataatttcagtgtataac-atcttaatcattatttaaaaccatgtaacaataataatttcatt-aaaaacc 901  Q
    |||| || || ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  32556446 accactaaacaataattatggtttcaataataatttcagtgtataactatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaatc 32556545  T
Q  902 attacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  32556546 attacacaattatcttggtttcacatgcaagactatcaaaaccattaaaccatatttatgg 32556606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 726 - 985
Target Start/End: Original strand, 7851363 - 7851618
Alignment:
Q  726 atttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggt 825  Q
    |||||| ||||||| |||||||||||| ||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||    
T  7851363 atttccatatgcaccctgcataaacacgtcacaaaaccattagaaaattattttggtttctcatagaagactatcaaaaccattaaaccataattatggt 7851462  T
Q  826 ttcagtaataatttcagtgtataacatcttaatcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcac 925  Q
    |||||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||    
T  7851463 ttcagtaataatttcaatgta---catcttaatcattatttaaaaccatgtaaaaataataatttcattaaaaatcattacacaattatcttggttttac 7851559  T
Q  926 atacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccataccatgaa 985  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||| ||||    
T  7851560 atacaagactatcaaaatcattaaaccacacttat-ggtttcagttatccataccctgaa 7851618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 758 - 960
Target Start/End: Complemental strand, 18762854 - 18762652
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||||||||||||| ||  ||||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||    
T  18762854 aaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaaaccatacttatggtttcagtaataatttcagtgtataacatgttaa 18762755  T
Q  858 tcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||| |||||||| |||||||| ||   ||||||||||||| ||||||||||||||    
T  18762754 tcattatttaaaatcatgtaccaataataatttcatttaaaaccattagacaattattttggtttctcaatgaagactatcaaaatcattaaaccatact 18762655  T
Q  958 tat 960  Q
    |||    
T  18762654 tat 18762652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 276 - 392
Target Start/End: Complemental strand, 15339701 - 15339585
Alignment:
Q  276 gttatggtggtgaccggtgatgaaggaggtggtggtggaggccgacgagaaagagagaggagcaccaacggccggccatcaaagggaggggtggggcgaa 375  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  15339701 gttatggtggtgaccggtgatgaaggtggtggtggtggcggccgacgagaaagagagaggaggaccaacggccggccatcaaagggagaggtggggcgaa 15339602  T
Q  376 ggacaaggatgaggcgg 392  Q
    ||  ||||||| |||||    
T  15339601 gggaaaggatgcggcgg 15339585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 758 - 874
Target Start/End: Complemental strand, 18762716 - 18762600
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||| ||||| |||||| |||  |||||| |||||||||||||||||||||||||||    
T  18762716 aaaaccattagacaattattttggtttctcaatgaagactatcaaaatcattaaaccatacttattgtttcattaataatttcagtgtataacatcttaa 18762617  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  18762616 tcattatttaaaaccat 18762600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 758 - 874
Target Start/End: Complemental strand, 18762607 - 18762491
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||| ||| |||| ||| |||| || | || |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||    
T  18762607 aaaaccattacacatttatcttgttttcacatacaatactatcaaaaccattaaaccatacttatggtttcagtaataatttcagtgtataacctcttaa 18762508  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  18762507 tcattatttaaaaccat 18762491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 28123278 - 28123388
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| |||||||||||||||| |||||||||||||  |||| ||||||| ||||  || |||||||||||||||| ||||||||||| |||||||    
T  28123278 aaccatgtaccaataataatttcatttaaaaccattacacccttatattggttttacatcgaacactatcaaaaccattataccatacttat-ggtttca 28123376  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  28123377 gtattccatacc 28123388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 28123477 - 28123587
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    |||||||||  ||||||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||| ||||||||||| |||||||    
T  28123477 aaccatgtattaataataatttcatttaaaaccattacacccttatattggttttacatagaacactatcaaaaccattataccatacttat-ggtttca 28123575  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  28123576 gtattccatacc 28123587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 18762607 - 18762531
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  18762607 aaaaccattacacatttatcttgttttcacatacaatactatcaaaaccattaaaccatacttat-ggtttcagtaat 18762531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 896 - 980
Target Start/End: Complemental strand, 18762498 - 18762415
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||  ||||||||||||||||||    
T  18762498 aaaaccattacacaattatcttggtttcacatgcaatactaaaaaaaccattaaaccatacttat-tgtttcagtaatccatacc 18762415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 18762854 - 18762778
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| ||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||||    
T  18762854 aaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaaaccatacttat-ggtttcagtaat 18762778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 707 - 779
Target Start/End: Complemental strand, 27079991 - 27079919
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattatttt 779  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||| ||||  ||||||||||||||||    
T  27079991 aagttattatgcataagtcattttcttatgcaccgtgcataaacacttcacaaaactattagacaattatttt 27079919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 22038196 - 22038098
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22038196 ataataatttcatctaaaaccattacaccataagtatggttttacataaaacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 22038098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 702 - 756
Target Start/End: Original strand, 18611188 - 18611242
Alignment:
Q  702 gacaaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  18611188 gacaaaagttattatgcataagacatttctttatgcactctgcataaacacttca 18611242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 869 - 979
Target Start/End: Original strand, 15033977 - 15034086
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| ||||||||||||   | ||||||||||||| || |   |||||| ||||| || |||||||||||||||| ||||||||||| |||||||    
T  15033977 aaccatgtaccaataataattttgatcaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattataccatacttat-ggtttca 15034075  T
Q  969 gtaatccatac 979  Q
    ||| |||||||    
T  15034076 gtattccatac 15034086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 962
Target Start/End: Complemental strand, 22038409 - 22038316
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||| | ||||||||||||   ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||||    
T  22038409 aaccatgtaccgataataatttcacctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatgg 22038316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 706 - 759
Target Start/End: Complemental strand, 4338682 - 4338629
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaa 759  Q
    |||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  4338682 aaagttgttatgcataagccattttcttatgcaccctgcataaacacttcaaaa 4338629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 756 - 829
Target Start/End: Original strand, 32556538 - 32556611
Alignment:
Q  756 aaaaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttca 829  Q
    |||||||||||| |||||||| |||||||| ||   ||||||||||||||||||| |||||| ||| |||||||    
T  32556538 aaaaaatcattacacaattatcttggtttcacatgcaagactatcaaaaccattaaaccatatttatggtttca 32556611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 906 - 954
Target Start/End: Complemental strand, 22037695 - 22037647
Alignment:
Q  906 cacaattatcttggtttcacatacaagactatcaaaaccattaaaccat 954  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  22037695 cacaattattttggtttcacatacaagaatatcgaaaccattaaaccat 22037647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 869 - 961
Target Start/End: Complemental strand, 22038579 - 22038487
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatg 961  Q
    |||||| || ||| |||||||||||  ||||||||||||| || |   |||||| ||||| || ||||| |||||||||||||||||||||||    
T  22038579 aaccatataccaacaataatttcatctaaaaccattacaccataagtatggttttacatagaacactattaaaaccattaaaccatacttatg 22038487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 709 - 756
Target Start/End: Complemental strand, 16968082 - 16968035
Alignment:
Q  709 gttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  16968082 gttattatgcataagccattttcttatgcaccctgcataaacacttca 16968035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 907 - 962
Target Start/End: Original strand, 28123076 - 28123131
Alignment:
Q  907 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||  ||||||||||||| || |||||||||||||||||||||||| |||||    
T  28123076 acaattagtttggtttcacatagaacactatcaaaaccattaaaccatacatatgg 28123131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 705 - 756
Target Start/End: Original strand, 30908655 - 30908706
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  30908655 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttca 30908706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 763 - 835
Target Start/End: Original strand, 28123070 - 28123142
Alignment:
Q  763 cattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| ||||||||| || |||| |||||||||||||||| ||||||  || |||||| ||||||    
T  28123070 catttgacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacatatggtttctgtaata 28123142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Original strand, 31216664 - 31216712
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  31216664 caaaagttatggtgcataagtcatttccttatgcaccgtgcataaacac 31216712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 773 - 832
Target Start/End: Original strand, 28123519 - 28123578
Alignment:
Q  773 ttattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagta 832  Q
    |||| |||||||  || |||| ||||||||||||||||||||||| ||| ||||||||||    
T  28123519 ttatattggttttacatagaacactatcaaaaccattataccatacttatggtttcagta 28123578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 790 - 832
Target Start/End: Original strand, 15034036 - 15034078
Alignment:
Q  790 agaagactatcaaaaccattataccataattacggtttcagta 832  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||    
T  15034036 agaacactatcaaaaccattataccatacttatggtttcagta 15034078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 28122934 - 28123000
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| |||||||  ||||||||| ||| || ||  |||||||||||||||||||| |||||    
T  28122934 aaaaccattagacaattagtttggtttcatatagaacaccgtcaaaaccattaaaccatacatatgg 28123000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Original strand, 28123342 - 28123379
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  28123342 actatcaaaaccattataccatacttatggtttcagta 28123379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 1e-56; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 707 - 867
Target Start/End: Complemental strand, 44509113 - 44508953
Alignment:
Q  707 aagttattatgcataagtcatttccttatgcactctgcataaacacttcaaaaaatcattagacaattattttggtttctcagagaagactatcaaaacc 806  Q
    |||||||||||||||||||| |||| ||||||| ||| | |||||||||| |||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  44509113 aagttattatgcataagtcagttccatatgcaccctgtagaaacacttcacaaaaccattagacaattattttgatttctcatagaagactatcaaaacc 44509014  T
Q  807 attataccataattacggtttcagtaataatttcagtgtataacatcttaatcattattta 867  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  44509013 attaaaccataattatggtttcaataataatttcagtgtataacatcttaatcattattta 44508953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 276 - 386
Target Start/End: Complemental strand, 24917715 - 24917605
Alignment:
Q  276 gttatggtggtgaccggtgatgaaggaggtggtggtggaggccgacgagaaagagagaggagcaccaacggccggccatcaaagggaggggtggggcgaa 375  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||||    
T  24917715 gttatggtggtgaccgatgatgaaggtggtggtggtggcggccgacgagaaagagagaggaggacaaacgaccggccatcaaagggagaggtggggcgaa 24917616  T
Q  376 ggacaaggatg 386  Q
    || ||||||||    
T  24917615 gggcaaggatg 24917605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 277 - 392
Target Start/End: Complemental strand, 1081140 - 1081025
Alignment:
Q  277 ttatggtggtgaccggtgatgaaggaggtggtggtggaggccgacgagaaagagagaggagcaccaacggccggccatcaaagggaggggtggggcgaag 376  Q
    ||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||    
T  1081140 ttatggtggtgaccggtgatgaaggtggtggtggtggcggtcgatgagaaagagagaggaggaccaacggccgaccatcaaatggagaggtggggcgaag 1081041  T
Q  377 gacaaggatgaggcgg 392  Q
    | |||| ||| |||||    
T  1081040 ggcaagcatgcggcgg 1081025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 17225599 - 17225709
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| |||||||||||||| | |||||||||||||  ||| |||||||| ||||| || |||||||||||||||||||||||||||| |||||||    
T  17225599 aaccatgtaccaataataatttcacttaaaaccattacacccttaacttggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttca 17225697  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  17225698 gtattccatacc 17225709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 869 - 980
Target Start/End: Complemental strand, 17057691 - 17057581
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| |||||||||||||| | ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||    
T  17057691 aaccatgtaccaataataatttcacttaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttca 17057593  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  17057592 gtattccatacc 17057581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 17590534 - 17590644
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| |||||||||||||| | ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||    
T  17590534 aaccatgtaccaataataatttcacttaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttca 17590632  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  17590633 gtattccatacc 17590644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 40006060 - 40006126
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  40006060 aaaaccattacacccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatgg 40006126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 869 - 962
Target Start/End: Original strand, 17225777 - 17225870
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||  ||||||||||||| | |||||||||||||  ||| |||||||| ||||| || ||||| ||||||||||||||||||||||||    
T  17225777 aaccatgtattaataataatttcacttaaaaccattacacccttaacttggttttacatagaacactattaaaaccattaaaccatacttatgg 17225870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 2522869 - 2522921
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2522869 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 2522921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 17225384 - 17225450
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| |||||||  ||||||||||||| || ||||||||||||||||||||||||||||||    
T  17225384 aaaaccattagacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacttatgg 17225450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 40247347 - 40247297
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40247347 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttca 40247297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 869 - 980
Target Start/End: Complemental strand, 17057490 - 17057379
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttc-acatacaagactatcaaaaccattaaaccatacttatgggtttc 967  Q
    ||||||||| |||||||||||||||  ||||||||||||| || |   ||||||  ||||| || ||||||||||||||| |||||||||||| ||||||    
T  17057490 aaccatgtaccaataataatttcatctaaaaccattacaccataagtatggtttttacataaaacactatcaaaaccattcaaccatacttat-ggtttc 17057392  T
Q  968 agtaatccatacc 980  Q
    |||| ||||||||    
T  17057391 agtattccatacc 17057379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 17590735 - 17590846
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttc-acatacaagactatcaaaaccattaaaccatacttatgggtttc 967  Q
    ||||||||| |||||||||||||||  ||||||||||||| || |   ||||||  ||||| || ||||||||||||||| |||||||||||| ||||||    
T  17590735 aaccatgtaccaataataatttcatctaaaaccattacaccataagtatggtttttacataaaacactatcaaaaccattcaaccatacttat-ggtttc 17590833  T
Q  968 agtaatccatacc 980  Q
    |||| ||||||||    
T  17590834 agtattccatacc 17590846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 706 - 757
Target Start/End: Complemental strand, 10443632 - 10443581
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttcaa 757  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  10443632 aaagttattatgcataagccatttccttatgcaccctgcataaacacttcaa 10443581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 13526733 - 13526683
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  13526733 aaagttattatgcataagccatttccttatgtactctgcataaacacttca 13526683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 706 - 756
Target Start/End: Complemental strand, 13616268 - 13616218
Alignment:
Q  706 aaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  13616268 aaagttattatgcataagccatttccttatgtactctgcataaacacttca 13616218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 896 - 962
Target Start/End: Complemental strand, 44509062 - 44508996
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| |||||||| ||| |||| |||| |||||||||||||||||||||||||| ||||||    
T  44509062 aaaaccattagacaattattttgatttctcatagaagactatcaaaaccattaaaccataattatgg 44508996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 17225384 - 17225461
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||| ||||||    
T  17225384 aaaaccattagacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacttatggtttctgtaata 17225461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 40005572 - 40005649
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| |||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  40005572 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttcagtaata 40005649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 40005572 - 40005648
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| || ||||  ||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||    
T  40005572 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttat-ggtttcagtaat 40005648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 12355424 - 12355476
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  12355424 caaaagttattacgcataagtcattttcttatgcaccctgcataaacacttca 12355476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 40005974 - 40006040
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| || ||||  ||||||||||||| || |||||||||||||||| |||||||||||||    
T  40005974 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatgg 40006040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 40006146 - 40006212
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    ||||||||||||| ||  |  |||||||||||| || ||||||||||||||||||||||||||||||    
T  40006146 aaaaccattacaccatacttatggtttcacatagaacactatcaaaaccattaaaccatacttatgg 40006212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 40005773 - 40005850
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| |||| ||||||||| || |||| | |||||||||||||| |||||| ||| |||||||||||||    
T  40005773 aaaaccattagaccattagtttggtttcacatagaacagtatcaaaaccattagaccatacttatggtttcagtaata 40005850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 40005773 - 40005849
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| || ||||  ||||||||||||| || | |||||||||||||| ||||||||||| ||||||||||||    
T  40005773 aaaaccattagaccattagtttggtttcacatagaacagtatcaaaaccattagaccatacttat-ggtttcagtaat 40005849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 705 - 756
Target Start/End: Original strand, 9852273 - 9852324
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  9852273 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttca 9852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 705 - 756
Target Start/End: Complemental strand, 34648191 - 34648140
Alignment:
Q  705 aaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  34648191 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttca 34648140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 758 - 829
Target Start/End: Original strand, 40005974 - 40006045
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttca 829  Q
    |||| |||||||| |||| ||||||||| || |||| |||||||||||||||| |||||| ||| |||||||    
T  40005974 aaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttca 40006045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 917 - 962
Target Start/End: Original strand, 40006124 - 40006169
Alignment:
Q  917 tggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||| || |||||||||||||||| |||||||||||||    
T  40006124 tggtttcacatagaacactatcaaaaccattacaccatacttatgg 40006169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 756
Target Start/End: Original strand, 15181792 - 15181844
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    |||||||||||||||||||    ||||||||||||| ||||||||||||||||    
T  15181792 caaaagttattatgcataatatgtttccttatgcaccctgcataaacacttca 15181844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Original strand, 30413916 - 30413964
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  30413916 caaaagttatgctgcataagtcatttccttatgcaccgtgcataaacac 30413964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 756
Target Start/End: Original strand, 30651958 - 30652003
Alignment:
Q  711 tattatgcataagtcatttccttatgcactctgcataaacacttca 756  Q
    ||||||||||||   |||||||||||||| ||||||||||||||||    
T  30651958 tattatgcataatctatttccttatgcaccctgcataaacacttca 30652003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 104; Significance: 3e-51; HSPs: 8)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 758 - 973
Target Start/End: Original strand, 413 - 626
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||| ||||||||| ||    |||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||||| ||||    
T  413 aaaaccattagacaattactttggtttcacattagagactatcaaaaccatgaaaccatacttatggtttcagtaataatttcagtgtataacatgttaa 512  T
Q  858 tcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    |||||||||||||||||||  |||||||||||| ||| ||||||| || | |||||| ||||||||||||  |||||| || |||| |||||||||||||    
T  513 tcattatttaaaaccatgtcccaataataattttatttaaaaccactagataattattttggtttcacattgaagactttc-aaactattaaaccatact 611  T
Q  958 tatgggtttcagtaat 973  Q
    ||| ||||||||||||    
T  612 tat-ggtttcagtaat 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 766 - 961
Target Start/End: Original strand, 559 - 746
Alignment:
Q  766 tagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaatcattatt 865  Q
    |||| ||||||||||||||| ||  ||||||| ||||| | |||| |||||| ||| ||||||||||||||||||||       ||||||||||||||||    
T  559 tagataattattttggtttcacattgaagactttcaaa-ctattaaaccatacttatggtttcagtaataatttcag-------catcttaatcattatt 650  T
Q  866 taaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatg 961  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||||    
T  651 taaaaccatgtaccaataataatttcatttaaaaccattacacaattatcttggtttgacatacaagactataaaaaacattaaacgatacttatg 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 896 - 980
Target Start/End: Original strand, 790 - 872
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  790 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccatt-aaccatacttat-ggtttcagtaatccatacc 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 758 - 874
Target Start/End: Original strand, 681 - 797
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||| |||||||| |||||||  || | |||||||| |||| ||||| || ||| ||| | |||||||||||||||||||||||||||||||||    
T  681 aaaaccattacacaattatcttggtttgacatacaagactataaaaaacattaaacgatacttatgatttcagtaataatttcagtgtataacatcttaa 780  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  781 tcattatttaaaaccat 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 25 - 101
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  25 aaaaccattagacaattattttggtttcacatagaacactatcaaaaccattaaaccatacttat-ggtttcagtaat 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 25 - 102
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||||||||||||| || |||| |||||||||||||||| |||||| ||| |||||||||||||    
T  25 aaaaccattagacaattattttggtttcacatagaacactatcaaaaccattaaaccatacttatggtttcagtaata 102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 758 - 834
Target Start/End: Original strand, 790 - 865
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaat 834  Q
    |||| ||||| |||||||| |||||||| || | ||||||||||||||||||| |||||| ||| ||||||||||||    
T  790 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccatta-accatacttatggtttcagtaat 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 897 - 953
Target Start/End: Original strand, 157 - 213
Alignment:
Q  897 aaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaacca 953  Q
    |||| |||| |||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  157 aaactattagacaattatttttctttcacatacaagtctatcaaaaccattaaacca 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 103; Significance: 1e-50; HSPs: 8)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 758 - 971
Target Start/End: Complemental strand, 39321 - 39112
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||||||||||||| ||  ||| | |||||||||||||| ||||||  || |||||||||||||||||||||| ||||||||||||    
T  39321 aaaaccattagacaattattttggtttcacattgaaaattatcaaaaccattaaaccatacgtatggtttcagtaataatttcagtgcataacatcttaa 39222  T
Q  858 tcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    ||||||||||||||||| ||    ||||||  |||||   ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  39221 tcattatttaaaaccat-tatttttaataaaatcatt--gaaccattacacaattatcttggttttacatacaacactatcaaaatcattaaaccatact 39125  T
Q  958 tatgggtttcagta 971  Q
    ||| ||||||||||    
T  39124 tat-ggtttcagta 39112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 39550 - 39474
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||  ||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||    
T  39550 aaaaccattagacaattagtttggtttcacatagaacactatcaaaactattaaaccatacttat-ggtttcagtaat 39474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 888 - 973
Target Start/End: Complemental strand, 39330 - 39245
Alignment:
Q  888 tttcatta-aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||| |||||||||| |||||||| ||||||||||||  || | |||||||||||||||||||||| ||| ||||||||||||    
T  39330 tttcattacaaaaccattagacaattattttggtttcacattgaaaattatcaaaaccattaaaccatacgtat-ggtttcagtaat 39245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Complemental strand, 39550 - 39473
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||| ||||||||| || |||| ||||||||||| |||| |||||| ||| |||||||||||||    
T  39550 aaaaccattagacaattagtttggtttcacatagaacactatcaaaactattaaaccatacttatggtttcagtaata 39473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 873 - 957
Target Start/End: Complemental strand, 38983 - 38896
Alignment:
Q  873 atgtaacaataataatttcatta---aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    ||||| ||||||||||||||| |   ||||||||||  ||||| | || |||||||||| || |||||||||||||||||||| ||||    
T  38983 atgtaccaataataatttcatcatttaaaaccattaggcaattctttttgtttcacatagaacactatcaaaaccattaaaccttact 38896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 758 - 832
Target Start/End: Complemental strand, 38957 - 38883
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagta 832  Q
    |||| |||||| ||||| |||| ||||| || |||| |||||||||||||||| ||| || | ||||||||||||    
T  38957 aaaaccattaggcaattctttttgtttcacatagaacactatcaaaaccattaaaccttactcacggtttcagta 38883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 896 - 954
Target Start/End: Complemental strand, 39927 - 39869
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccat 954  Q
    |||||||||| |||||||  ||||||||||||| || |  |||||||||||||||||||    
T  39927 aaaaccattagacaattagtttggtttcacatagaacataatcaaaaccattaaaccat 39869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 758 - 835
Target Start/End: Complemental strand, 39927 - 39850
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||| ||||||||| || |||| |  ||||||||||||| |||||  | | |||||||||||||    
T  39927 aaaaccattagacaattagtttggtttcacatagaacataatcaaaaccattaaaccatgttgatggtttcagtaata 39850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 103; Significance: 1e-50; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 758 - 971
Target Start/End: Original strand, 168518 - 168727
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||||||||||||||||||| ||  ||| |||||||||||||||| ||||||  || |||||||||||||||||||||| ||||||||||||    
T  168518 aaaaccattagacaattattttggtttcacattgaaaactatcaaaaccattaaaccatacgtatggtttcagtaataatttcagtgcataacatcttaa 168617  T
Q  858 tcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    |||||||||| |||||| ||    ||||||   ||||  |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  168618 tcattatttataaccat-tatttttaataaaaccatt--aaaccattacgcaattatcttggttttacatacaacactatcaaaaccattaaaccatact 168714  T
Q  958 tatgggtttcagta 971  Q
    ||| ||||||||||    
T  168715 tat-ggtttcagta 168727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 168518 - 168594
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||| ||||||||||||  || |||||||||||||||||||||||| ||| ||||||||||||    
T  168518 aaaaccattagacaattattttggtttcacattgaaaactatcaaaaccattaaaccatacgtat-ggtttcagtaat 168594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 168324 - 168400
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| | |||||  ||||||||||||| || |||||||||||||||||| ||||||||| ||||||||||||    
T  168324 aaaaccattagaaaattagtttggtttcacatagaacactatcaaaaccattaaatcatacttat-ggtttcagtaat 168400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 168324 - 168401
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||| ||||| ||||||||| || |||| |||||||||||||||| | |||| ||| |||||||||||||    
T  168324 aaaaccattagaaaattagtttggtttcacatagaacactatcaaaaccattaaatcatacttatggtttcagtaata 168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 74; Significance: 2e-33; HSPs: 6)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 758 - 971
Target Start/End: Original strand, 10640 - 10831
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||||| ||||||||||||||| ||  ||| |||||||||||||||| || |||  || |||||||||||||||||||||| ||||||||||||    
T  10640 aaaaccattagaaaattattttggtttcacattgaaaactatcaaaaccattaaactatacgtatggtttcagtaataatttcagtgcataacatcttaa 10739  T
Q  858 tcattatttaaaaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatact 957  Q
    ||||||| |||||||||                      |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  10740 tcattatataaaaccat---------------------taaaccattacacaattatcttggttttacatacaacactatcaaaaccattaaaccatact 10818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 10436 - 10512
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| |||||||  ||||||||||||| || |||| ||||||||||||||||||||||| ||||||||||||    
T  10436 aaaaccattagacaattagtttggtttcacatagaacactaccaaaaccattaaaccatacttat-ggtttcagtaat 10512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 10059 - 10125
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| ||||| |  ||||||||||||| || ||||||||||||||||||||||||||||||    
T  10059 aaaaccattagacaataagtttggtttcacatagaacactatcaaaaccattaaaccatacttatgg 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 10436 - 10513
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||||| ||||||||| || |||| |||| ||||||||||| |||||| ||| |||||||||||||    
T  10436 aaaaccattagacaattagtttggtttcacatagaacactaccaaaaccattaaaccatacttatggtttcagtaata 10513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 10059 - 10136
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||||||| | ||||||||| || |||| |||||||||||||||| |||||| ||| ||||||| |||||    
T  10059 aaaaccattagacaataagtttggtttcacatagaacactatcaaaaccattaaaccatacttatggtttcaataata 10136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 896 - 973
Target Start/End: Original strand, 10640 - 10716
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||| | |||||| ||||||||||||  || ||||||||||||||||||| |||| ||| ||||||||||||    
T  10640 aaaaccattagaaaattattttggtttcacattgaaaactatcaaaaccattaaactatacgtat-ggtttcagtaat 10716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 69; Significance: 2e-30; HSPs: 14)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 874
Target Start/End: Complemental strand, 16306 - 16190
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaa 857  Q
    |||| ||||| ||||||||||||||||| ||  ||||||| ||||||||||||  ||||| |||  |||| |||||||||||||||||||||||||||||    
T  16306 aaaaccattacacaattattttggtttcacattgaagactgtcaaaaccattaagccatacttatagttttagtaataatttcagtgtataacatcttaa 16207  T
Q  858 tcattatttaaaaccat 874  Q
    |||||||||||||||||    
T  16206 tcattatttaaaaccat 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 22679 - 22603
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  22679 aaaaccattacacatttatcttggtttcacatacaatactatcaaaaccattaaaccatacttat-ggtttcagtaat 22603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 759 - 863
Target Start/End: Complemental strand, 22874 - 22770
Alignment:
Q  759 aaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatcttaat 858  Q
    ||||||||| ||||||||||||||||| || | || |||||||||| ||||| |||||| ||| |||||||||||||||||||||| ||||||||  |||    
T  22874 aaatcattacacaattattttggtttcacatacaatactatcaaaatcattaaaccatacttatggtttcagtaataatttcagtggataacatcaaaat 22775  T
Q  859 catta 863  Q
    |||||    
T  22774 catta 22770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 16197 - 16121
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  16197 aaaaccattacatatttattttggtttcacatacaatactatcaaaaccattaaaccatacttat-ggtttcagtaat 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 901 - 973
Target Start/End: Complemental strand, 22870 - 22799
Alignment:
Q  901 cattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  22870 cattacacaattattttggtttcacatacaatactatcaaaatcattaaaccatacttat-ggtttcagtaat 22799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 896 - 973
Target Start/End: Complemental strand, 16588 - 16512
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    |||||||||||||||| |||||||||||||||  || ||||| |||||||||||||||||||||| ||||||||||||    
T  16588 aaaaccattacacaataatcttggtttcacatttaatactattaaaaccattaaaccatacttat-ggtttcagtaat 16512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 773 - 849
Target Start/End: Complemental strand, 16182 - 16106
Alignment:
Q  773 ttattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataa 849  Q
    ||||||||||||| || | || |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  16182 ttattttggtttcacatacaatactatcaaaaccattaaaccatacttatggtttcagtaataatttcagtgtataa 16106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 758 - 853
Target Start/End: Complemental strand, 22679 - 22584
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaataatttcagtgtataacatc 853  Q
    |||| ||||| ||| |||| |||||||| || | || |||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||    
T  22679 aaaaccattacacatttatcttggtttcacatacaatactatcaaaaccattaaaccatacttatggtttcagtaataattttagtgtataacatc 22584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #9
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 896 - 955
Target Start/End: Complemental strand, 22779 - 22720
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccata 955  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  22779 aaaatcattacacatttatcttggtttcacatacaatactatcaaaaccattaaaccata 22720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 758 - 853
Target Start/End: Complemental strand, 22779 - 22680
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattac----ggtttcagtaataatttcagtgtataacatc 853  Q
    |||||||||| ||| |||| |||||||| || | || |||||||||||||||| ||||||| |||    |||||||||||||||||||||||||||||||    
T  22779 aaaatcattacacatttatcttggtttcacatacaatactatcaaaaccattaaaccataaatacttatggtttcagtaataatttcagtgtataacatc 22680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 896 - 960
Target Start/End: Complemental strand, 16306 - 16242
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttat 960  Q
    ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||| ||||||||||    
T  16306 aaaaccattacacaattattttggtttcacattgaagactgtcaaaaccattaagccatacttat 16242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 798 - 852
Target Start/End: Complemental strand, 22931 - 22877
Alignment:
Q  798 atcaaaaccattataccataattacggtttcagtaataatttcagtgtataacat 852  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  22931 atcaaaaccattaaaccatacttatggtttcagtaataatttcagtgtataacat 22877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 896 - 942
Target Start/End: Complemental strand, 16101 - 16055
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaa 942  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||    
T  16101 aaaaccattacacatttatcttggtttcagatacaatactatcaaaa 16055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 936 - 973
Target Start/End: Complemental strand, 22931 - 22895
Alignment:
Q  936 atcaaaaccattaaaccatacttatgggtttcagtaat 973  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  22931 atcaaaaccattaaaccatacttat-ggtttcagtaat 22895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 60; Significance: 5e-25; HSPs: 7)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 1563 - 1673
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| |||||||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||| ||||||||||| ||||| |    
T  1563 aaccatgtaccaataataatttcatttaaaaccattacacccttatattggttttacatagaacactatcaaaaccattataccatacttat-ggtttta 1661  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  1662 gtattccatacc 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 1762 - 1872
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    |||||||||  ||||||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||| ||||||||||| |||||||    
T  1762 aaccatgtattaataataatttcatttaaaaccattacacccttatattggttttacatagaacactatcaaaaccattataccatacttat-ggtttca 1860  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  1861 gtattccatacc 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 869 - 980
Target Start/End: Original strand, 1364 - 1474
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    ||||||||| ||||||||||| |||| |||||||||||||  |||| ||||||| ||||  || ||||||||||||||||  |||||||||| |||||||    
T  1364 aaccatgtaccaataataattccatttaaaaccattacacccttatattggttttacatcgaacactatcaaaaccattatcccatacttat-ggtttca 1462  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  1463 gtattccatacc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 907 - 962
Target Start/End: Original strand, 1162 - 1217
Alignment:
Q  907 acaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||  ||||||||||||| || |||||||||||||||||||||||| |||||    
T  1162 acaattagtttggtttcacatagaacactatcaaaaccattaaaccatacatatgg 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 763 - 835
Target Start/End: Original strand, 1156 - 1228
Alignment:
Q  763 cattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| |||||||| ||||||||| || |||| |||||||||||||||| ||||||  || |||||| ||||||    
T  1156 catttgacaattagtttggtttcacatagaacactatcaaaaccattaaaccatacatatggtttctgtaata 1228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #6
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 773 - 832
Target Start/End: Original strand, 1804 - 1863
Alignment:
Q  773 ttattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagta 832  Q
    |||| |||||||  || |||| ||||||||||||||||||||||| ||| ||||||||||    
T  1804 ttatattggttttacatagaacactatcaaaaccattataccatacttatggtttcagta 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 1020 - 1086
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| |||||||  ||||||||| ||| || ||  |||||||||||||||||||| |||||    
T  1020 aaaaccattagacaattagtttggtttcatatagaacaccgtcaaaaccattaaaccatacatatgg 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 47; Significance: 3e-17; HSPs: 15)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 881 - 979
Target Start/End: Original strand, 19669 - 19766
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  19669 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatac 19766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 885 - 979
Target Start/End: Original strand, 30933 - 31026
Alignment:
Q  885 taatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||  ||||||||||||| || |  ||||||| ||||| || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  30933 taatttcatctaaaaccattacaccataagtttggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatac 31026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 881 - 979
Target Start/End: Complemental strand, 33482 - 33385
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  33482 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatac 33385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 881 - 979
Target Start/End: Complemental strand, 33992 - 33895
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||| ||| ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  33992 ataataattttatttaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatac 33895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 881 - 979
Target Start/End: Complemental strand, 34162 - 34065
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||| ||||||||||||| || |   |||||| | ||| || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  34162 ataataatttcatttaaaaccattacaccataagtatggttttaaatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatac 34065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 881 - 980
Target Start/End: Original strand, 28783 - 28881
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  28783 ataataacttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 28881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 881 - 979
Target Start/End: Original strand, 19499 - 19596
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||| ||||||||| |||||||||| |||||||    
T  19499 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttat-ggtttcagtattccatac 19596  T

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Target: scaffold0144; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 881 - 979
Target Start/End: Complemental strand, 33652 - 33555
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||| ||||||||| |||||||||| |||||||    
T  33652 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttat-ggtttcagtattccatac 33555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 881 - 962
Target Start/End: Original strand, 19839 - 19920
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||||||||||    
T  19839 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatgg 19920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 881 - 979
Target Start/End: Complemental strand, 33822 - 33725
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  33822 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacatat-ggtttcagtattccatac 33725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 881 - 971
Target Start/End: Complemental strand, 34332 - 34243
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagta 971  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||| |||||| ||||||||||    
T  34332 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccacacttat-ggtttcagta 34243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 881 - 962
Target Start/End: Complemental strand, 34502 - 34421
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||| |||||||||||    
T  34502 ataataatttcatctaaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttatgg 34421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 917 - 980
Target Start/End: Original strand, 28649 - 28711
Alignment:
Q  917 tggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    |||||| ||||| || |||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  28649 tggttttacatataacactatcaaaatcattaaaccatacttat-ggtttcagtattccatacc 28711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 924 - 979
Target Start/End: Original strand, 19372 - 19426
Alignment:
Q  924 acatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||||| |||||||    
T  19372 acatataacactgtcaaaaccattaaaccatacttat-ggtttcagtattccatac 19426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 924 - 979
Target Start/End: Complemental strand, 34629 - 34575
Alignment:
Q  924 acatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||||| |||||||    
T  34629 acatataacactgtcaaaaccattaaaccatacttat-ggtttcagtattccatac 34575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 879 - 980
Target Start/End: Complemental strand, 8955 - 8855
Alignment:
Q  879 caataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccata 978  Q
    |||||||||||||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||| |||||||||||| |||||||||| ||||||    
T  8955 caataataatttcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattcaaccatacttat-ggtttcagtattccata 8857  T
Q  979 cc 980  Q
    ||    
T  8856 cc 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 924 - 980
Target Start/End: Original strand, 5927 - 5982
Alignment:
Q  924 acatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  5927 acatagaacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 1e-16; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 879 - 980
Target Start/End: Complemental strand, 126347 - 126247
Alignment:
Q  879 caataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccata 978  Q
    ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||    
T  126347 caataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttat-ggtttcagtattccata 126249  T
Q  979 cc 980  Q
    ||    
T  126248 cc 126247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 869 - 980
Target Start/End: Complemental strand, 126527 - 126417
Alignment:
Q  869 aaccatgtaacaataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttca 968  Q
    |||||| || ||||||||| |||||  ||||||||||||| || |   |||||| ||||| || ||||||||||||||||||||||| |||| |||||||    
T  126527 aaccatataccaataataaattcatctaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatatttat-ggtttca 126429  T
Q  969 gtaatccatacc 980  Q
    ||| ||||||||    
T  126428 gtattccatacc 126417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 980
Target Start/End: Complemental strand, 128668 - 128570
Alignment:
Q  881 ataataatttcattaaaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgggtttcagtaatccatacc 980  Q
    ||||||| |||||  ||||||||||||| || |   |||||| |||||  | |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  128668 ataataaattcatctaaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttat-ggtttcagtattccatacc 128570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 906 - 947
Target Start/End: Complemental strand, 125656 - 125615
Alignment:
Q  906 cacaattatcttggtttcacatacaagactatcaaaaccatt 947  Q
    ||||||||| |||||||||||||||||| |||| ||||||||    
T  125656 cacaattattttggtttcacatacaagaatatcgaaaccatt 125615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 896 - 962
Target Start/End: Original strand, 6375 - 6439
Alignment:
Q  896 aaaaccattacacaattatcttggtttcacatacaagactatcaaaaccattaaaccatacttatgg 962  Q
    |||||||||| | |||||| ||  ||||||||| || ||||||||||||||||||||||||||||||    
T  6375 aaaaccattagataattatttt--tttcacatagaacactatcaaaaccattaaaccatacttatgg 6439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 6375 - 6450
Alignment:
Q  758 aaaatcattagacaattattttggtttctcagagaagactatcaaaaccattataccataattacggtttcagtaata 835  Q
    |||| ||||||| |||||||||  |||| || |||| |||||||||||||||| |||||| ||| ||||||| |||||    
T  6375 aaaaccattagataattatttt--tttcacatagaacactatcaaaaccattaaaccatacttatggtttcaataata 6450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 33; Significance: 0.000000007; HSPs: 3)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 704 - 752
Target Start/End: Complemental strand, 8485 - 8437
Alignment:
Q  704 caaaagttattatgcataagtcatttccttatgcactctgcataaacac 752  Q
    ||||||||||  |||||||| |||||||||||||||| |||||||||||    
T  8485 caaaagttatggtgcataagccatttccttatgcactgtgcataaacac 8437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 933 - 979
Target Start/End: Original strand, 310 - 355
Alignment:
Q  933 actatcaaaaccattaaaccatacttatgggtttcagtaatccatac 979  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  310 actatcaaaaccattataccatacttat-ggtttcagtattccatac 355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 832
Target Start/End: Original strand, 310 - 347
Alignment:
Q  795 actatcaaaaccattataccataattacggtttcagta 832  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  310 actatcaaaaccattataccatacttatggtttcagta 347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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