View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5562-Insertion-3 (Length: 950)

Name: NF5562-Insertion-3
Description: NF5562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5562-Insertion-3
NF5562-Insertion-3
[»] chr8 (38 HSPs)
chr8 (12-492)||(36984660-36985141)
chr8 (621-725)||(14666130-14666234)
chr8 (839-950)||(36986203-36986322)
chr8 (726-789)||(36986121-36986184)
chr8 (621-725)||(2467177-2467281)
chr8 (627-725)||(24837189-24837287)
chr8 (621-727)||(38922473-38922579)
chr8 (621-726)||(45521115-45521219)
chr8 (621-725)||(43027252-43027356)
chr8 (621-726)||(9860054-9860160)
chr8 (628-725)||(1013043-1013140)
chr8 (621-725)||(3418572-3418676)
chr8 (621-725)||(8141049-8141153)
chr8 (621-725)||(15884615-15884718)
chr8 (106-188)||(36984636-36984718)
chr8 (621-725)||(6100419-6100523)
chr8 (621-725)||(10927553-10927657)
chr8 (621-721)||(17981392-17981492)
chr8 (621-721)||(18373961-18374061)
chr8 (621-721)||(33401858-33401958)
chr8 (646-725)||(34723707-34723786)
chr8 (639-725)||(8997621-8997707)
chr8 (621-725)||(583761-583863)
chr8 (676-721)||(35496368-35496413)
chr8 (634-726)||(17845679-17845769)
chr8 (677-725)||(34846761-34846809)
chr8 (621-725)||(44893337-44893441)
chr8 (666-725)||(7673758-7673816)
chr8 (666-725)||(9395922-9395981)
chr8 (621-660)||(33935794-33935833)
chr8 (627-725)||(29933720-29933817)
chr8 (676-726)||(10535517-10535567)
chr8 (679-725)||(18091348-18091394)
chr8 (666-704)||(20240538-20240576)
chr8 (666-704)||(20252491-20252529)
chr8 (676-725)||(6940505-6940554)
chr8 (676-725)||(22810027-22810076)
chr8 (518-547)||(36985160-36985189)
[»] chr1 (41 HSPs)
chr1 (14-473)||(31377039-31377498)
chr1 (12-492)||(43601119-43601599)
chr1 (621-725)||(34877934-34878038)
chr1 (621-725)||(5855466-5855570)
chr1 (621-725)||(49078058-49078162)
chr1 (621-725)||(2980991-2981095)
chr1 (621-725)||(8763935-8764039)
chr1 (621-725)||(10422732-10422836)
chr1 (621-725)||(15465909-15466013)
chr1 (621-704)||(17358531-17358614)
chr1 (621-704)||(34334355-34334438)
chr1 (621-724)||(41663916-41664019)
chr1 (106-188)||(43601541-43601623)
chr1 (621-725)||(12036804-12036908)
chr1 (621-725)||(34697279-34697383)
chr1 (611-726)||(51437412-51437527)
chr1 (635-721)||(892371-892457)
chr1 (639-725)||(40288555-40288641)
chr1 (676-725)||(41743217-41743266)
chr1 (621-725)||(17642064-17642168)
chr1 (621-725)||(18915811-18915915)
chr1 (625-725)||(21429662-21429762)
chr1 (625-722)||(47312963-47313059)
chr1 (621-725)||(14254328-14254432)
chr1 (621-725)||(26325756-26325860)
chr1 (621-725)||(26660082-26660186)
chr1 (621-721)||(32150982-32151082)
chr1 (621-725)||(50503421-50503525)
chr1 (602-725)||(8905192-8905314)
chr1 (647-726)||(11397974-11398053)
chr1 (106-188)||(31377013-31377096)
chr1 (621-703)||(34719742-34719824)
chr1 (665-722)||(10173075-10173132)
chr1 (677-725)||(15238222-15238270)
chr1 (621-725)||(18649412-18649516)
chr1 (621-725)||(18808209-18808313)
chr1 (627-726)||(41696664-41696762)
chr1 (677-724)||(42744732-42744779)
chr1 (621-722)||(2567223-2567324)
chr1 (625-722)||(5063908-5064004)
chr1 (621-686)||(16263528-16263593)
[»] chr4 (44 HSPs)
chr4 (35-492)||(40842522-40842974)
chr4 (621-725)||(1446774-1446878)
chr4 (621-725)||(29895735-29895839)
chr4 (621-725)||(3574505-3574609)
chr4 (621-725)||(43458561-43458665)
chr4 (39-188)||(7747179-7747327)
chr4 (626-726)||(33647668-33647768)
chr4 (621-722)||(18531470-18531571)
chr4 (621-725)||(38165975-38166079)
chr4 (621-729)||(47078402-47078510)
chr4 (621-725)||(55920982-55921086)
chr4 (620-725)||(52950030-52950135)
chr4 (621-725)||(2559255-2559359)
chr4 (621-725)||(6779159-6779263)
chr4 (621-725)||(8888970-8889074)
chr4 (621-725)||(14123964-14124068)
chr4 (621-725)||(24166398-24166502)
chr4 (621-720)||(20421727-20421825)
chr4 (675-725)||(48317388-48317438)
chr4 (116-185)||(7747138-7747207)
chr4 (621-721)||(5472907-5473007)
chr4 (12-88)||(7747269-7747345)
chr4 (677-725)||(14567199-14567247)
chr4 (665-725)||(27248376-27248436)
chr4 (621-709)||(36145274-36145362)
chr4 (627-726)||(12703610-12703709)
chr4 (627-725)||(41162947-41163045)
chr4 (626-695)||(14567937-14568006)
chr4 (627-728)||(54524877-54524978)
chr4 (621-725)||(38075381-38075485)
chr4 (621-725)||(53599008-53599112)
chr4 (634-725)||(7000472-7000563)
chr4 (649-711)||(15840021-15840083)
chr4 (677-722)||(6032755-6032800)
chr4 (676-725)||(19651559-19651608)
chr4 (621-689)||(7246705-7246773)
chr4 (611-719)||(13552068-13552176)
chr4 (677-725)||(27531772-27531820)
chr4 (622-725)||(13073486-13073589)
chr4 (677-727)||(34667717-34667767)
chr4 (12-70)||(40842617-40842675)
chr4 (676-725)||(12887317-12887366)
chr4 (621-702)||(20128280-20128361)
chr4 (626-703)||(38168227-38168304)
[»] scaffold0010 (1 HSPs)
scaffold0010 (620-725)||(25842-25947)
[»] chr7 (29 HSPs)
chr7 (620-725)||(22268087-22268192)
chr7 (621-725)||(47341822-47341926)
chr7 (621-725)||(48804629-48804733)
chr7 (621-726)||(43925457-43925562)
chr7 (621-725)||(18785615-18785719)
chr7 (621-725)||(27028225-27028329)
chr7 (623-725)||(10047937-10048039)
chr7 (621-725)||(13095804-13095908)
chr7 (621-725)||(21530694-21530798)
chr7 (621-722)||(1797409-1797510)
chr7 (621-725)||(17748441-17748545)
chr7 (621-726)||(4195261-4195366)
chr7 (621-725)||(43862031-43862135)
chr7 (634-725)||(5039490-5039581)
chr7 (621-704)||(36619313-36619396)
chr7 (652-725)||(19914792-19914865)
chr7 (621-726)||(43346838-43346943)
chr7 (621-725)||(4973169-4973273)
chr7 (666-722)||(11607080-11607136)
chr7 (621-725)||(22993426-22993530)
chr7 (677-728)||(16802066-16802117)
chr7 (622-725)||(45447916-45448019)
chr7 (621-723)||(34659174-34659276)
chr7 (611-719)||(9685691-9685799)
chr7 (621-725)||(22973913-22974017)
chr7 (621-725)||(42210321-42210425)
chr7 (654-725)||(4228843-4228914)
chr7 (639-725)||(34127697-34127783)
chr7 (666-704)||(44336860-44336898)
[»] chr5 (38 HSPs)
chr5 (621-725)||(26077085-26077189)
chr5 (621-725)||(1538375-1538479)
chr5 (621-725)||(19572668-19572772)
chr5 (621-725)||(42086271-42086375)
chr5 (621-725)||(28857072-28857176)
chr5 (621-725)||(5731979-5732083)
chr5 (598-725)||(16755005-16755132)
chr5 (621-714)||(25417242-25417335)
chr5 (621-726)||(30995064-30995169)
chr5 (621-725)||(2485141-2485244)
chr5 (621-725)||(3653973-3654075)
chr5 (621-725)||(12704958-12705062)
chr5 (621-725)||(18136339-18136443)
chr5 (621-725)||(20525782-20525886)
chr5 (621-725)||(35561877-35561981)
chr5 (647-725)||(6767136-6767214)
chr5 (621-722)||(7308423-7308524)
chr5 (621-725)||(20156203-20156307)
chr5 (665-726)||(20255312-20255373)
chr5 (621-722)||(35813057-35813158)
chr5 (621-725)||(7866525-7866629)
chr5 (621-725)||(8513463-8513567)
chr5 (621-725)||(9812816-9812920)
chr5 (676-728)||(23383589-23383641)
chr5 (602-721)||(25950622-25950741)
chr5 (621-725)||(30349523-30349627)
chr5 (621-725)||(35403571-35403675)
chr5 (621-725)||(38897778-38897881)
chr5 (602-650)||(40060315-40060363)
chr5 (679-725)||(28856921-28856967)
chr5 (621-714)||(1898956-1899049)
chr5 (676-725)||(5079275-5079324)
chr5 (621-725)||(20682676-20682781)
chr5 (621-725)||(42861277-42861381)
chr5 (665-725)||(14728026-14728086)
chr5 (621-704)||(13664225-13664308)
chr5 (676-725)||(14974438-14974485)
chr5 (620-686)||(21149717-21149783)
[»] chr3 (45 HSPs)
chr3 (621-725)||(32873609-32873712)
chr3 (621-722)||(6462358-6462459)
chr3 (621-725)||(51683014-51683118)
chr3 (621-725)||(54261169-54261273)
chr3 (621-725)||(29127862-29127966)
chr3 (621-725)||(29135856-29135960)
chr3 (621-725)||(35315899-35316003)
chr3 (621-725)||(48341963-48342067)
chr3 (621-724)||(35923683-35923786)
chr3 (621-726)||(3755512-3755617)
chr3 (621-725)||(25294903-25295007)
chr3 (652-725)||(33251605-33251678)
chr3 (628-725)||(40944826-40944923)
chr3 (621-725)||(928543-928647)
chr3 (621-725)||(29762215-29762319)
chr3 (621-725)||(30045764-30045868)
chr3 (621-725)||(49198294-49198398)
chr3 (626-725)||(11025438-11025535)
chr3 (621-725)||(7310763-7310867)
chr3 (621-725)||(7328787-7328891)
chr3 (621-725)||(26207861-26207965)
chr3 (621-725)||(42412834-42412938)
chr3 (621-725)||(45877397-45877501)
chr3 (621-725)||(47471775-47471878)
chr3 (622-725)||(7612987-7613090)
chr3 (621-720)||(49082772-49082871)
chr3 (621-726)||(47749165-47749269)
chr3 (621-725)||(10040500-10040603)
chr3 (621-721)||(30767307-30767407)
chr3 (624-696)||(53649699-53649771)
chr3 (630-721)||(30735014-30735105)
chr3 (676-725)||(28242221-28242270)
chr3 (665-726)||(46529974-46530035)
chr3 (621-725)||(11687169-11687273)
chr3 (665-725)||(13893869-13893929)
chr3 (621-661)||(26043819-26043859)
chr3 (677-725)||(37092621-37092669)
chr3 (677-725)||(39849015-39849063)
chr3 (621-725)||(45450507-45450608)
chr3 (621-725)||(51060341-51060445)
chr3 (621-725)||(55069739-55069843)
chr3 (626-709)||(28997655-28997738)
chr3 (602-661)||(50682484-50682543)
chr3 (628-726)||(7650169-7650267)
chr3 (676-721)||(47303604-47303649)
[»] chr2 (42 HSPs)
chr2 (621-725)||(331444-331548)
chr2 (621-709)||(25540463-25540551)
chr2 (624-726)||(18902592-18902694)
chr2 (621-725)||(7747217-7747321)
chr2 (621-725)||(8410074-8410178)
chr2 (621-725)||(34356149-34356253)
chr2 (621-725)||(38005345-38005449)
chr2 (620-725)||(15079426-15079531)
chr2 (621-725)||(20612594-20612699)
chr2 (621-714)||(25549682-25549775)
chr2 (621-725)||(2550811-2550915)
chr2 (621-725)||(3643946-3644050)
chr2 (621-725)||(6358210-6358314)
chr2 (621-725)||(14169668-14169772)
chr2 (621-725)||(22593078-22593181)
chr2 (621-725)||(42770710-42770814)
chr2 (621-696)||(15234120-15234195)
chr2 (621-726)||(12864166-12864271)
chr2 (621-722)||(21286390-21286491)
chr2 (622-725)||(11069821-11069924)
chr2 (631-725)||(44193422-44193516)
chr2 (621-722)||(35946685-35946785)
chr2 (621-726)||(41031965-41032069)
chr2 (624-725)||(44139427-44139528)
chr2 (621-725)||(10026675-10026779)
chr2 (621-725)||(21180373-21180477)
chr2 (621-724)||(41187793-41187896)
chr2 (676-725)||(23500795-23500844)
chr2 (664-725)||(44945537-44945598)
chr2 (621-725)||(2528400-2528504)
chr2 (621-725)||(9360807-9360911)
chr2 (621-725)||(10669535-10669639)
chr2 (621-725)||(38962706-38962810)
chr2 (621-725)||(44773208-44773310)
chr2 (634-725)||(29422158-29422249)
chr2 (621-696)||(34346346-34346421)
chr2 (678-725)||(40969031-40969078)
chr2 (621-704)||(41220599-41220682)
chr2 (611-649)||(792185-792223)
chr2 (676-722)||(29802757-29802803)
chr2 (666-735)||(3598856-3598925)
chr2 (676-725)||(10046590-10046639)
[»] chr6 (26 HSPs)
chr6 (621-726)||(5253282-5253387)
chr6 (621-725)||(21898595-21898699)
chr6 (639-725)||(13468880-13468966)
chr6 (628-725)||(9179802-9179899)
chr6 (621-722)||(13036063-13036164)
chr6 (621-725)||(14107417-14107521)
chr6 (621-725)||(19089445-19089549)
chr6 (621-725)||(24671925-24672029)
chr6 (639-725)||(3030695-3030781)
chr6 (623-725)||(8938658-8938760)
chr6 (635-725)||(21016824-21016914)
chr6 (621-725)||(2271362-2271464)
chr6 (621-722)||(9147251-9147352)
chr6 (627-725)||(6606162-6606260)
chr6 (671-725)||(15643937-15643991)
chr6 (621-722)||(3601034-3601135)
chr6 (621-725)||(8612033-8612137)
chr6 (621-718)||(9366482-9366579)
chr6 (621-725)||(12606377-12606481)
chr6 (621-725)||(29444824-29444928)
chr6 (677-726)||(19230672-19230721)
chr6 (677-725)||(5759575-5759623)
chr6 (621-725)||(8932608-8932712)
chr6 (621-725)||(8944074-8944178)
chr6 (621-725)||(10311528-10311632)
chr6 (626-703)||(34954683-34954760)
[»] scaffold0009 (2 HSPs)
scaffold0009 (628-725)||(9382-9479)
scaffold0009 (621-720)||(42891-42990)
[»] scaffold0002 (3 HSPs)
scaffold0002 (621-726)||(515-620)
scaffold0002 (622-725)||(319369-319471)
scaffold0002 (634-725)||(412098-412189)
[»] scaffold0005 (3 HSPs)
scaffold0005 (621-736)||(271133-271248)
scaffold0005 (677-725)||(250128-250176)
scaffold0005 (626-695)||(249369-249438)
[»] scaffold0209 (1 HSPs)
scaffold0209 (621-725)||(12521-12623)
[»] scaffold0016 (1 HSPs)
scaffold0016 (676-728)||(8824-8876)
[»] scaffold0743 (1 HSPs)
scaffold0743 (792-840)||(5189-5237)
[»] scaffold0316 (1 HSPs)
scaffold0316 (621-724)||(1673-1776)
[»] scaffold0004 (1 HSPs)
scaffold0004 (621-719)||(95040-95136)
[»] scaffold0029 (1 HSPs)
scaffold0029 (677-727)||(40988-41038)


Alignment Details
Target: chr8 (Bit Score: 394; Significance: 0; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 12 - 492
Target Start/End: Original strand, 36984660 - 36985141
Alignment:
Q  12 gggtttcatgcaaaatctatatttggtgttgtttcaatgaataaaaatgagattttgaatgatggtagtttgacaaaatcggaacaccagaaccgttcaa 111  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||    
T  36984660 gggtttgatgcaaaatctctgtttggtgttgtttcaatgaataaaaatgagattttgaatgatggtagtttgacaaaatcaaaacaccagagtcgttcaa 36984759  T
Q  112 aaccccttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatgaagaaagatgagattttgaagcaggtaaagaggagaaaagggc 211  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36984760 aaccccttaatctcaaatgggtttgattcaaaatttcaagttggtgttgtttcaatgaagaaagatgagattttgaagcaggtaaagaggagaaaagggc 36984859  T
Q  212 gcatagaatatggcggtatttcaatatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaacaaaaatgacaataaagactgggtt 311  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  36984860 gcatagaatatggtgttctttcaatatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaacaaaaattaccatgaagactgggtt 36984959  T
Q  312 ttagaatgaatgcttgagagaaaatacttgtgtatgttgatatggttgtacatgatgtttttagtgttaatgttttag-tcattggttttgtaaagttag 410  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  36984960 ttagaatgaatgcttgagagaaaatacttgtgtatgttcatatggttgtacatgatgtttttagtgttaatgttttagttcattggttgtgtaaagttag 36985059  T
Q  411 taattttgattccagattttcaattgatgaagatgaagtgtttccagatttttctctactcacgcgtcccttacaatttgcc 492  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  36985060 tgattttgattccagattttcaattgatgaagatgaagtgtttccagatttttctctactcatgtgtcccttacaatttgcc 36985141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 14666130 - 14666234
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||  |||| ||||||||||   |||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||    
T  14666130 catgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaact 14666229  T
Q  721 tggtt 725  Q
    |||||    
T  14666230 tggtt 14666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 839 - 950
Target Start/End: Original strand, 36986203 - 36986322
Alignment:
Q  839 tctttgatactatctctatct--gctttgtctc--tattatttttgtctaa---gaagaga-gagaaaatgttgtcccagagattgttccaatacaatta 930  Q
    ||||||||||||||||| |||  ||||||||||  ||||||||||||||||   ||||||| |||||||||||||||| || ||||||||||||||||||    
T  36986203 tctttgatactatctctctctatgctttgtctcactattatttttgtctaataagaagagaagagaaaatgttgtcccggaaattgttccaatacaatta 36986302  T
Q  931 tatctctagtatacataaac 950  Q
    ||||||| ||||||||||||    
T  36986303 tatctctggtatacataaac 36986322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 726 - 789
Target Start/End: Original strand, 36986121 - 36986184
Alignment:
Q  726 gttcatatttaattcttaagaaagatgaatcgagtgtaatttacttaagtatttaataatatta 789  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  36986121 gttcatatttaattcttaaggaagatgaatcgagtgtaatttatttaagtatttaataatatta 36986184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 2467177 - 2467281
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| |||| | ||||||||   |||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  2467177 catgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 2467276  T
Q  721 tggtt 725  Q
    |||||    
T  2467277 tggtt 2467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 627 - 725
Target Start/End: Complemental strand, 24837287 - 24837189
Alignment:
Q  627 cactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||| |||| |||||||||||| |||||||||||  |||||||||   ||||| ||||||| |||||| ||||||| ||||||||||||||||||||    
T  24837287 cactggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaacttggtt 24837189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 621 - 727
Target Start/End: Original strand, 38922473 - 38922579
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| | || ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| |||||||||||||||    
T  38922473 catgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 38922572  T
Q  721 tggttgt 727  Q
    |||||||    
T  38922573 tggttgt 38922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 621 - 726
Target Start/End: Complemental strand, 45521219 - 45521115
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||| ||||||||||||| |||| ||||||||||   |||||||||   ||| |||||||||||| ||| ||||||| |||||||||||||||    
T  45521219 catgcgcactgatcaagtgttgttc-ccctgggaatcgaacccggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaact 45521121  T
Q  721 tggttg 726  Q
    ||||||    
T  45521120 tggttg 45521115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 43027356 - 43027252
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||| ||| |||  |||||||  ||| ||||||||||  |||||||||||||||||| |||| ||||||||| ||||||| ||||||||| |||||    
T  43027356 catgcgcattggacaatcgttgttcctcctgggaatcgaacccagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaact 43027257  T
Q  721 tggtt 725  Q
    |||||    
T  43027256 tggtt 43027252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 621 - 726
Target Start/End: Original strand, 9860054 - 9860160
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaa-atacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    ||||| |||||| |||||||||||| |||| ||||||||||   |||||||||   |||||||||||||| |||||||||||||| ||| ||||| ||||    
T  9860054 catgcacactggccaagtgttgttccccctgggaatcgaacccggtattcccccggatacgtccttggaaggagctctttgccactggatcccaaacaac 9860153  T
Q  720 ttggttg 726  Q
    |||||||    
T  9860154 ttggttg 9860160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 628 - 725
Target Start/End: Original strand, 1013043 - 1013140
Alignment:
Q  628 actggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||| |||| ||||||| |||| ||||||||||   |||||||||  ||||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  1013043 actggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactggagcccaagcaacttggtt 1013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 3418572 - 3418676
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| ||||||||||||  ||||  ||||||||    ||||||||| |||||||||||||| |||||| ||||||| |||| |||| |||||    
T  3418572 catgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaact 3418671  T
Q  721 tggtt 725  Q
    |||||    
T  3418672 tggtt 3418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 8141153 - 8141049
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||  |||| | ||||||||   ||||||||| |||||||||||||||  ||||| ||||||| ||||||||| |||||    
T  8141153 catgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaact 8141054  T
Q  721 tggtt 725  Q
    |||||    
T  8141053 tggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 15884615 - 15884718
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||| | |||||||||||| |||| ||||||||||   ||||||||||  ||||||||||||| |||||| || |||| ||||||||| |||||    
T  15884615 catgcgcacttgccaagtgttgttc-ccctgggaatcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaact 15884713  T
Q  721 tggtt 725  Q
    |||||    
T  15884714 tggtt 15884718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 36984636 - 36984718
Alignment:
Q  106 gttcaaaaccccttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatgaagaaagatgagattttgaa 188  Q
    ||||||| | ||| ||||||||||||||||||| |||||||||   || |||||||||||||||| ||| |||||||||||||    
T  36984636 gttcaaagctcctaaatctcaaatgggtttgatgcaaaatctctgtttggtgttgtttcaatgaataaaaatgagattttgaa 36984718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 6100523 - 6100419
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  ||| ||||||||||   |||||||||  ||||||||||| || |||||| ||||||| | ||||||| |||||    
T  6100523 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaact 6100424  T
Q  721 tggtt 725  Q
    |||||    
T  6100423 tggtt 6100419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 10927657 - 10927553
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  ||||||||||||||   |||||||||   |||||||||| ||  ||||| ||||||| | |||||||||||||    
T  10927657 catgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaact 10927558  T
Q  721 tggtt 725  Q
    |||||    
T  10927557 tggtt 10927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 721
Target Start/End: Complemental strand, 17981492 - 17981392
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| ||||||||||| ||||||| |||| ||||||||||   ||||| |||   ||| ||||||||| |||||| ||||||| |||||||||||||||    
T  17981492 catgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaact 17981393  T
Q  721 t 721  Q
    |    
T  17981392 t 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 721
Target Start/End: Complemental strand, 18374061 - 18373961
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| ||||||||||||  ||||||||| | ||||| |||  |||  || ||||||||||||| ||||||  ||||||||| |||||    
T  18374061 catgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatatatctttggaatgagctccttgccattggagcccaaacaact 18373962  T
Q  721 t 721  Q
    |    
T  18373961 t 18373961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 721
Target Start/End: Original strand, 33401858 - 33401958
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| ||||||||||||||||||| ||||   ||||||||   ||||||||| | |||||||||| || |||||| ||||||| ||||||||| |||||    
T  33401858 catgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggagctccttgccactggagcccaaacaact 33401957  T
Q  721 t 721  Q
    |    
T  33401958 t 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 646 - 725
Target Start/End: Original strand, 34723707 - 34723786
Alignment:
Q  646 tccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||| |||||||||| ||||||| ||| |||| ||| |||||| |||||| ||||||||||||| ||| ||||||||||    
T  34723707 tccctgggaatcgaacttagtatttcccgaatatgtctttggaaggagctcattgccaccggagctcaaacaacttggtt 34723786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 725
Target Start/End: Original strand, 8997621 - 8997707
Alignment:
Q  639 gttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| || |||||||||||||  ||||||||| |||| ||||||| || ||| || ||||||| |||| |||||||||||||||    
T  8997621 gttgttccccttaggaatcgaacacggtattccccgaatatgtccttgaaaggagttccttgccactggagtccaagcaacttggtt 8997707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 583863 - 583761
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| |||||||  ||||||||||||||   ||||| | | | |||||||||||||  ||||| |||||||  |||||||| |||||    
T  583863 catgcgcactggtcaagcgttgttc--cctaggaatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaact 583766  T
Q  721 tggtt 725  Q
    |||||    
T  583765 tggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 676 - 721
Target Start/End: Original strand, 35496368 - 35496413
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  35496368 atacgtccttgaaatgagctccttgccaccggagcccaagcaactt 35496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 726
Target Start/End: Complemental strand, 17845769 - 17845679
Alignment:
Q  634 caagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    |||||||||||| |||| |||||| |||  |||||||||| | ||| ||||||||| |||||| ||||||| ||||||||| |||||||||||    
T  17845769 caagtgttgttc-ccctgggaatcaaacc-agtattccccgagtacatccttggaaggagctcattgccactggagcccaaacaacttggttg 17845679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 677 - 725
Target Start/End: Complemental strand, 34846809 - 34846761
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  34846809 tacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 34846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 44893337 - 44893441
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| ||||  |||||| |||||| ||| ||||   |||||||||   ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  44893337 catgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaact 44893436  T
Q  721 tggtt 725  Q
    |||||    
T  44893437 tggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 666 - 725
Target Start/End: Original strand, 7673758 - 7673816
Alignment:
Q  666 tattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||| |||||||||||||| |||||| ||||||| |||| |||||||||||||||    
T  7673758 tattccccagatacgtccttggaaggagctccttgccactggag-ccaagcaacttggtt 7673816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 666 - 725
Target Start/End: Original strand, 9395922 - 9395981
Alignment:
Q  666 tattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||| |||| |||||| ||||||||| ||||||| |||| |||||||||||||||    
T  9395922 tattccccagatacatccttgaaatgagctcattgccactggagtccaagcaacttggtt 9395981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 621 - 660
Target Start/End: Original strand, 33935794 - 33935833
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaa 660  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  33935794 catgcgcactggccaagtgttgttctccctaggaatcgaa 33935833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 627 - 725
Target Start/End: Complemental strand, 29933817 - 29933720
Alignment:
Q  627 cactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||||||||||||| ||||||||||   |||||| ||  |||| | ||| ||| |||||| ||||||| |||| |||| ||||||||||    
T  29933817 cactggtcaagtgttgttctccctgggaatcgaac-ccgtattctccggatacattcttagaaggagctccttgccactggagtccaaacaacttggtt 29933720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 676 - 726
Target Start/End: Original strand, 10535517 - 10535567
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    |||||||||||||| |||||| ||||||| |||| |||| |||||||||||    
T  10535517 atacgtccttggaaggagctccttgccactggagtccaaacaacttggttg 10535567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 679 - 725
Target Start/End: Complemental strand, 18091394 - 18091348
Alignment:
Q  679 cgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||| ||||| ||||||| ||||||||| ||||||||||    
T  18091394 cgtccttggaataagctccttgccactggagcccaaacaacttggtt 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 20240576 - 20240538
Alignment:
Q  666 tattccccaaatacgtccttggaatgagctctttgccac 704  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  20240576 tattccctagatacgtccttggaatgagctctttgccac 20240538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 20252491 - 20252529
Alignment:
Q  666 tattccccaaatacgtccttggaatgagctctttgccac 704  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  20252491 tattccctagatacgtccttggaatgagctctttgccac 20252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 725
Target Start/End: Complemental strand, 6940554 - 6940505
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||| |||||||||||||||| || |||| ||||||||| ||||||||||    
T  6940554 atacctccttggaatgagctccttaccactggagcccaaacaacttggtt 6940505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 725
Target Start/End: Complemental strand, 22810076 - 22810027
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||| |||||| |||||||  |||||||| ||||||||||    
T  22810076 atacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 22810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 547
Target Start/End: Original strand, 36985160 - 36985189
Alignment:
Q  518 taagatatatacgcgtggaattaattaatg 547  Q
    ||||||||||||||||||||||||||||||    
T  36985160 taagatatatacgcgtggaattaattaatg 36985189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 379; Significance: 0; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 14 - 473
Target Start/End: Original strand, 31377039 - 31377498
Alignment:
Q  14 gtttcatgcaaaatctatatttggtgttgtttcaatgaataaaa-atgagattttgaatgatggtagtttgacaaaatcggaacaccagaaccgttcaaa 112  Q
    |||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  31377039 gtttgatgcaaaatctctatttggtgttgtttcaatgaaaaaaaaatgagattttgaatgatggtagtttgacaaaatcggaacaccggagccgttcaaa 31377138  T
Q  113 accccttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatgaagaaagatgagattttgaagcaggtaaagaggagaaaagggcg 212  Q
    | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31377139 agcccttaatctcaaatgggtttgattcaaaatctcaagttggtgtggtttcaatgaagaaagatgagattttgaagcaggtaaagaggagaaaagggcg 31377238  T
Q  213 catagaatatggcggtatttcaatatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaacaaaaatgacaataaagactgggttt 312  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31377239 catagaatatggtgttatttcaatatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaacaaaaatgacaatgaagactgagttt 31377338  T
Q  313 tagaatgaatgcttgagagaaaatacttgtgtatgttgatatggttgtacatgatgtttttagtgttaatgttttag-tcattggttttgtaaagttagt 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  31377339 tagaatgaatgcttgagagaaaatacttgtgtatgttgatatggttgtacatgatgtttttagtgttaatgttttagttcattggttgtgtaaagttagt 31377438  T
Q  412 aattttgattccagattttcaattgatgaagatgaagtgtttccagatttttctctactcac 473  Q
     |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  31377439 gattttgattccagattttcaattgatgaagatgaagtgtttcc--atttttctctactcac 31377498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 12 - 492
Target Start/End: Complemental strand, 43601599 - 43601119
Alignment:
Q  12 gggtttcatgcaaaatctatatttggtgttgtttcaatgaataaaaatgagattttgaatgatggtagtttgacaaaatcggaacaccagaaccgttcaa 111  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  43601599 gggtttgatgcaaaatctctatttggtgttgtttcaatgaataaaaatgagattttgaatgatggcagtttgacaaaatcggaacaccggagccgttcaa 43601500  T
Q  112 aacccc-ttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatgaagaaagatgagattttgaagcaggtaaagaggagaaaaggg 210  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43601499 aacccccttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatgaagaaatatgagattttgaagcaggtaaagaggagaaaaggg 43601400  T
Q  211 cgcatagaatatggcggtatttcaatatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaacaaaaatgacaataaagactgggt 310  Q
    | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||    
T  43601399 cacatagaatatggtgttatttcaatatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaac-aaaatgacaatgaagaatgggt 43601301  T
Q  311 tttagaatgaatgcttgagagaaaatacttgtgtatgttgatatggttgtacatgatgtttttagtgttaatgttttag-tcattggttttgtaaagtta 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  43601300 tttagaatgaatgcttgagagaaaatacttgtgtatgttgatatggttgtacatgatatttttagtgttaatgttttagttcattggttgtgtaaagtta 43601201  T
Q  410 gtaattttgattccagattttcaattgatgaagatgaagtgtttccagatttttctctactcacgcgtcccttacaatttgcc 492  Q
    || |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||| || |||||||||||||||    
T  43601200 gtgattttgattcgagattttcaattgatgaag-tgaagtgtttctagatttttctccactcactcgccccttacaatttgcc 43601119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 34878038 - 34877934
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| ||||||||||||  |||||||||||||| | ||||||||| ||||||||||||||| | |||| ||||||| | ||||||| |||||    
T  34878038 catgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccactgaagcccaaacaact 34877939  T
Q  721 tggtt 725  Q
    |||||    
T  34877938 tggtt 34877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 5855570 - 5855466
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  ||| ||||||||||   ||||||||| ||||||||||||||| |||||| ||||||| ||||||||| |||||    
T  5855570 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaact 5855471  T
Q  721 tggtt 725  Q
    |||||    
T  5855470 tggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 49078162 - 49078058
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||  |||| ||||||||||   |||||||||  |||||||||| ||| |||||| ||||||| |||||||||||||||    
T  49078162 catgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaact 49078063  T
Q  721 tggtt 725  Q
    |||||    
T  49078062 tggtt 49078058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 2980991 - 2981095
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||||||||||| | || ||||||||||  ||||||||||  |||||||| ||||| |||||| |||||||  ||||||||||||||    
T  2980991 catgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctccttgccactagagcccaagcaact 2981090  T
Q  721 tggtt 725  Q
    |||||    
T  2981091 tggtt 2981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 8764039 - 8763935
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| |||| |||||    ||||||||   ||||||||||||| |||||| ||||||| |||||||||||||||    
T  8764039 catgcgcactggccaagtgttgttccccctgggaaacgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaact 8763940  T
Q  721 tggtt 725  Q
    |||||    
T  8763939 tggtt 8763935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 10422836 - 10422732
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| ||||||||||||  ||||| ||||||||   ||||||||| |||||||| |||||| |||||| ||||||| | ||||||| |||||    
T  10422836 catgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaact 10422737  T
Q  721 tggtt 725  Q
    |||||    
T  10422736 tggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 15466013 - 15465909
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||  |||| ||||||| |||| | |||||||| | ||||||||||||||||||||||||| |||| ||||| ||| ||||||||| |||||    
T  15466013 catgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagccctttgtcactggagcccaaacaact 15465914  T
Q  721 tggtt 725  Q
    |||||    
T  15465913 tggtt 15465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 621 - 704
Target Start/End: Original strand, 17358531 - 17358614
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccac 704  Q
    |||||||| |||||||| ||||||||||||  |||||||||   |||||||||||||||||||||| ||||||||| |||||||    
T  17358531 catgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatacgtccttgaaatgagctccttgccac 17358614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 621 - 704
Target Start/End: Original strand, 34334355 - 34334438
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccac 704  Q
    |||||||||||| |||||||||||| |||| ||||||||||   |||||||||  ||||||||||||||||||||| |||||||    
T  34334355 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccac 34334438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 621 - 724
Target Start/End: Original strand, 41663916 - 41664019
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| |||| ||||||||||   |||||||||  |||||||||| ||| |||||| ||||||| ||||||||| |||||    
T  41663916 catgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaact 41664015  T
Q  721 tggt 724  Q
    ||||    
T  41664016 tggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 43601623 - 43601541
Alignment:
Q  106 gttcaaaaccccttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatgaagaaagatgagattttgaa 188  Q
    ||||||| | ||| ||||||||||||||||||| ||||||||| | || |||||||||||||||| ||| |||||||||||||    
T  43601623 gttcaaagctcctaaatctcaaatgggtttgatgcaaaatctctatttggtgttgtttcaatgaataaaaatgagattttgaa 43601541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 12036804 - 12036908
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| ||||  |||||| ||||||||||| |||  ||||||| | |  ||||||||||||| |||||  ||||||||||||||||| |||||    
T  12036804 catgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttcttgccaccggagcccaaacaact 12036903  T
Q  721 tggtt 725  Q
    |||||    
T  12036904 tggtt 12036908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 34697383 - 34697279
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||| | |||||||||||| ||||| ||||||||| | ||||||||| |||||||  |||||| |||||| ||||||||  || ||||||||||    
T  34697383 catgcacactagccaagtgttgttccccctaagaatcgaacctggtattccccgaatacgtttttggaaggagctccttgccaccaaagtccaagcaact 34697284  T
Q  721 tggtt 725  Q
    |||||    
T  34697283 tggtt 34697279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 611 - 726
Target Start/End: Complemental strand, 51437527 - 51437412
Alignment:
Q  611 taatccggctcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagc 710  Q
    ||||||||||||||||||||||||||| ||||||| || | ||||||||||    |||||| |  ||||||||||| || |||||| ||| ||| | |||    
T  51437527 taatccggctcatgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagc 51437428  T
Q  711 ccaagcaacttggttg 726  Q
    |||| |||||||||||    
T  51437427 ccaaacaacttggttg 51437412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 635 - 721
Target Start/End: Original strand, 892371 - 892457
Alignment:
Q  635 aagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||||| |||||||||||||||   ||||||||| |||||||||||| || |||||| ||||||| | ||||||| ||||||    
T  892371 aagtgttgttccccctaggaatcgaacccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaactt 892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 639 - 725
Target Start/End: Original strand, 40288555 - 40288641
Alignment:
Q  639 gttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| |||| | ||||||||   ||||||||| ||||||||||||||| |||||| |||||||  |||||||||||||||||||    
T  40288555 gttgttccccctggaaatcgaacccggtattccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaacttggtt 40288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 676 - 725
Target Start/End: Complemental strand, 41743266 - 41743217
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  41743266 atacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 41743217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 17642064 - 17642168
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||  |||||| ||    ||||||| ||||| |||||| ||| ||| ||||||||| |||||    
T  17642064 catgcgcactggccaagtgttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaact 17642163  T
Q  721 tggtt 725  Q
    |||||    
T  17642164 tggtt 17642168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 18915915 - 18915811
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||||||||||| |||| ||||||||||   |||||||||   |||||||||||||  ||||| ||||||| | ||||||| |||||    
T  18915915 catgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaact 18915816  T
Q  721 tggtt 725  Q
    |||||    
T  18915815 tggtt 18915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 625 - 725
Target Start/End: Original strand, 21429662 - 21429762
Alignment:
Q  625 cgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggt 724  Q
    |||||||| |||| |||||||||||||  |||||||| || |||| | ||||||||||||||||| || |||  || ||| ||||||||| |||||||||    
T  21429662 cgcactggccaagcgttgttctccctaaaaatcgaacctaatatttctcaaatacgtccttggaaggaactccatgtcactggagcccaaacaacttggt 21429761  T
Q  725 t 725  Q
    |    
T  21429762 t 21429762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 625 - 722
Target Start/End: Original strand, 47312963 - 47313059
Alignment:
Q  625 cgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    |||||||| |||  ||||||| ||||||||||| |||   |||||||||| |||||||||||||| || ||| ||||||| ||||||||| |||||||    
T  47312963 cgcactggccaaacgttgttc-ccctaggaatcaaacccggtattccccagatacgtccttggaaggatctcgttgccactggagcccaaacaacttg 47313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 14254328 - 14254432
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||| ||||| |||| ||||||| ||||   ||||||||   ||||||||| ||||||||||||||||||| || ||||| | |||| | ||||||||    
T  14254328 catgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtccttggaatgagttccttgcccctggaggctaagcaact 14254427  T
Q  721 tggtt 725  Q
    |||||    
T  14254428 tggtt 14254432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 26325860 - 26325756
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| | || ||||||||||    |||||| |  ||||||||||| || |||||| ||||||| ||||||| |||||||    
T  26325860 catgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaact 26325761  T
Q  721 tggtt 725  Q
    |||||    
T  26325760 tggtt 26325756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 26660186 - 26660082
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||| |||| |||| |||||||| || | | ||||||||   ||||||||| |||||||| || |||  | ||||||||||| |||||||||||||||    
T  26660186 catgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaagcaact 26660087  T
Q  721 tggtt 725  Q
    |||||    
T  26660086 tggtt 26660082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 721
Target Start/End: Original strand, 32150982 - 32151082
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  ||| |||||||| |||| | |||||||| |  |||||| | || |||||||||||| |||||| ||||||| ||||||||| |||||    
T  32150982 catgcgcactgaccaaatgttgttccccctggaaatcgaacctgatattcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaact 32151081  T
Q  721 t 721  Q
    |    
T  32151082 t 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 50503421 - 50503525
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||||||||||| |||| ||||||||||    ||||||||  ||||||||||| || |||||| | |||||  ||| |||  |||||    
T  50503421 catgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttgaaaggagctcctcgccactagagtccatacaact 50503520  T
Q  721 tggtt 725  Q
    |||||    
T  50503521 tggtt 50503525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 602 - 725
Target Start/End: Original strand, 8905192 - 8905314
Alignment:
Q  602 gtggtcgattaatccggctcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgc 701  Q
    |||||||||||||| |||||||||||||||| |||| ||||||| |||| | ||||| ||    ||||| ||  ||||||| |||||| |||||| ||||    
T  8905192 gtggtcgattaatctggctcatgcgcactggccaagcgttgttc-cccttgaaatcgtacccgatattctccggatacgtcattggaaggagctccttgc 8905290  T
Q  702 caccggagcccaagcaacttggtt 725  Q
    |||  ||| |||| ||||||||||    
T  8905291 cactagagtccaaacaacttggtt 8905314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 647 - 726
Target Start/End: Original strand, 11397974 - 11398053
Alignment:
Q  647 ccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    |||| ||||||||||   |||||| ||  |||| ||||||||| |||||| ||||||| |||||||||||||||||||||    
T  11397974 ccctcggaatcgaacccggtattctccggatacatccttggaaggagctccttgccactggagcccaagcaacttggttg 11398053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 31377013 - 31377096
Alignment:
Q  106 gttcaaaaccccttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatg-aagaaagatgagattttgaa 188  Q
    ||||||| | ||| ||||||||||| ||||||| ||||||||| | || |||||||||||||| || ||| |||||||||||||    
T  31377013 gttcaaagctcctaaatctcaaatgagtttgatgcaaaatctctatttggtgttgtttcaatgaaaaaaaaatgagattttgaa 31377096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 621 - 703
Target Start/End: Complemental strand, 34719824 - 34719742
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgcca 703  Q
    ||||||||||||||||| ||| ||| |  | ||||||||||  |||||||||||  ||||||||||||| |||||| ||||||    
T  34719824 catgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattccccaggtacgtccttggaaggagctccttgcca 34719742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 722
Target Start/End: Original strand, 10173075 - 10173132
Alignment:
Q  665 gtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    |||||||||| |||||||||||||| |||| | ||||||| ||||||||| |||||||    
T  10173075 gtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 677 - 725
Target Start/End: Original strand, 15238222 - 15238270
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  15238222 tacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 15238270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 18649412 - 18649516
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| ||||||| ||||   ||||||||    ||||| ||| |||||||||||||| |||||| || ||||  |||  |||||||||    
T  18649412 catgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgtccttggaaggagctcattaccactagagttcaagcaact 18649511  T
Q  721 tggtt 725  Q
    |||||    
T  18649512 tggtt 18649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 18808313 - 18808209
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| ||||||| | ||  |||| |||| |  ||||||  | ||||||||||||||  | ||| ||||||| ||||||||| |||||    
T  18808313 catgcgcactggtcaagcgttgttccctctgagaattgaacctgttattccttagatacgtccttggaagaaactcattgccactggagcccaaacaact 18808214  T
Q  721 tggtt 725  Q
    |||||    
T  18808213 tggtt 18808209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 726
Target Start/End: Original strand, 41696664 - 41696762
Alignment:
Q  627 cactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    |||||||||||||||  || |||| | ||||||||   ||||||| || |||||||||||||| |||||| |||||||  ||| | ||||||||||||||    
T  41696664 cactggtcaagtgttaatccccctggaaatcgaaccc-gtattcctcagatacgtccttggaaggagctcattgccactagagtctaagcaacttggttg 41696762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 724
Target Start/End: Complemental strand, 42744779 - 42744732
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggt 724  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||||||||    
T  42744779 tacgtccttggaaggagctcattgccactggagtccaagcaacttggt 42744732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 2567324 - 2567223
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||| ||||    ||||||||   |||||| || ||||||||||||||| |||||| ||||||  | ||||||| |||||    
T  2567324 catgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctccttgccagtgaagcccaaacaact 2567225  T
Q  721 tg 722  Q
    ||    
T  2567224 tg 2567223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 722
Target Start/End: Original strand, 5063908 - 5064004
Alignment:
Q  625 cgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    |||||||| |||| ||||| | ||||| ||||||||   | ||||||||| |||||||||||||| |||||  |||||||| ||||| || |||||||    
T  5063908 cgcactggccaagcgttgtgc-ccctaagaatcgaatccaatattccccagatacgtccttggaaggagcttcttgccaccagagcctaaacaacttg 5064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 686
Target Start/End: Complemental strand, 16263593 - 16263528
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttg 686  Q
    |||||||||||| |||| |||||||  ||| | |||||||| | |||||||||| |||||||||||    
T  16263593 catgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgtccttg 16263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 360; Significance: 0; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 35 - 492
Target Start/End: Original strand, 40842522 - 40842974
Alignment:
Q  35 tggtgttgtttcaatgaataaaaatgagattttgaatgatggtagtttgacaaaatcggaacaccagaaccgttcaaaaccccttaatctcaaatgggtt 134  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  40842522 tggtgttgtttcaatgaataaaaatgagattttgaatgatggcagtttgacaaaatcggaacaccggagccgttcaaaaccccttaatctcaaatgggtt 40842621  T
Q  135 tgattcaaaatctcaagttagtgttgtttcaatgaagaaagatgagattttgaagcaggtaaagaggagaaaagggcgcatagaatatggcggtatttca 234  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | |||||||    
T  40842622 tgattcaaaatctcaagttggtgttgtttcaatgaagaaagatgagattttgaagcaggtaaagaggagaaaagggcgtataaaatatggtgttatttca 40842721  T
Q  235 atatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaacaaaaatgacaataaagactgggttttagaatgaatgcttgagagaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  40842722 atatatttggattagaaatgaaagaacaaaaagtgggaagatgaagaaggaacaaaaatgacaatgaagactgggttttagaatgaatgcttaagagaaa 40842821  T
Q  335 atacttgtgtatgttgatatggttgtacatgatgtttttagtgttaatgttttag-tcattggttttgtaaagttagtaattttgattccagattttcaa 433  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||      | |||||||||||||||||||||    
T  40842822 atacttgtgtgtgttgatatggttgtacatgatgtttttagtgttaatgttttagttcattggttgtgtaa------tgattttgattccagattttcaa 40842915  T
Q  434 ttgatgaagatgaagtgtttccagatttttctctactcacgcgtcccttacaatttgcc 492  Q
    || |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  40842916 ttaatgaagatgaagtgtttccatatttttctccactcacgtgtcccttacaatttgcc 40842974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 1446878 - 1446774
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   |||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  1446878 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 1446779  T
Q  721 tggtt 725  Q
    |||||    
T  1446778 tggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 29895839 - 29895735
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   |||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  29895839 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 29895740  T
Q  721 tggtt 725  Q
    |||||    
T  29895739 tggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 3574505 - 3574609
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| ||||||||||||||||| ||||| ||||   |||||||| |  ||||||||||||| |||||| ||||||| |||||||||||||||    
T  3574505 catgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagctccttgccactggagcccaagcaact 3574604  T
Q  721 tggtt 725  Q
    |||||    
T  3574605 tggtt 3574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 43458665 - 43458561
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||| |||  ||| |||||||||   ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  43458665 catgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttggaatgagcttcttgccactggagcccaagcaact 43458566  T
Q  721 tggtt 725  Q
    |||||    
T  43458565 tggtt 43458561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 7747179 - 7747327
Alignment:
Q  39 gttgtttcaatgaataaaaatgagattttgaatgatggtagtttgacaaaatcggaacaccagaaccgttcaaaaccccttaatctcaaatgggtttgat 138  Q
    ||||||||||||||||||||||||||||| |||| ||||  ||||  |||||| ||||    |    ||||||||||| | |||||||||||||||||||    
T  7747179 gttgtttcaatgaataaaaatgagattttaaatggtggtgttttggtaaaatctgaacttggggtt-gttcaaaacccttcaatctcaaatgggtttgat 7747277  T
Q  139 tcaaaatctcaagttagtgttgtttcaatgaagaaagatgagattttgaa 188  Q
    ||||||||| || || ||||||||||| |||| ||||||||| |||||||    
T  7747278 tcaaaatctgaacttggtgttgtttcagtgaataaagatgaggttttgaa 7747327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 626 - 726
Target Start/End: Complemental strand, 33647768 - 33647668
Alignment:
Q  626 gcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||| |||||||||||| | ||||||||   |||||||||| ||||||||||| || |||||| |||||||  |||||||||||||||||||    
T  33647768 gcactggtcaagcgttgttctccctggaaatcgaacccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttggtt 33647669  T
Q  726 g 726  Q
    |    
T  33647668 g 33647668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 18531571 - 18531470
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| |||| || ||| || ||||||||||||| |||||| ||||||||||||| ||||||||  |||||||| |||||    
T  18531571 catgcgcactgaccaagtgttgttccccctggggatcaaatatagtattccccagatacgttcttggaatgagctttttgccactagagcccaatcaact 18531472  T
Q  721 tg 722  Q
    ||    
T  18531471 tg 18531470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 38166079 - 38165975
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| |||| |||||| |||  ||||||||||  |||||||||||||| |||||| ||||||  ||||||||| |||||    
T  38166079 catgcgcactggccaagcgttgttccccctgggaatccaacccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaact 38165980  T
Q  721 tggtt 725  Q
    |||||    
T  38165979 tggtt 38165975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 729
Target Start/End: Complemental strand, 47078510 - 47078402
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||| |||| ||||||| |||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| ||| |||||||||||    
T  47078510 catgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaact 47078411  T
Q  721 tggttgttc 729  Q
    |||||||||    
T  47078410 tggttgttc 47078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 55921086 - 55920982
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| |||| ||||||||||   |||||||||   | ||||||||||| |||||| ||||||| |||||||||||||||    
T  55921086 catgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaact 55920987  T
Q  721 tggtt 725  Q
    |||||    
T  55920986 tggtt 55920982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 620 - 725
Target Start/End: Complemental strand, 52950135 - 52950030
Alignment:
Q  620 tcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    ||||||||||||| |||| ||||||| |||| ||||||||||    |||||||||  ||||||||||||| |||||| |||||||  |||||||| ||||    
T  52950135 tcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaacaac 52950036  T
Q  720 ttggtt 725  Q
    ||||||    
T  52950035 ttggtt 52950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 2559359 - 2559255
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  ||||| |||||||    ||||||||||  ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  2559359 catgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaact 2559260  T
Q  721 tggtt 725  Q
    |||||    
T  2559259 tggtt 2559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 6779263 - 6779159
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| || ||||||||| |||| ||||||||||   |||||| |||  |||||||||||||  ||||| ||||||| ||||||||| |||||    
T  6779263 catgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaact 6779164  T
Q  721 tggtt 725  Q
    |||||    
T  6779163 tggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 8889074 - 8888970
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| |||||||||||||||   |||||||||  |||||||||| ||| |||||| ||||| |  |||||||| |||||    
T  8889074 catgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaact 8888975  T
Q  721 tggtt 725  Q
    |||||    
T  8888974 tggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 14124068 - 14123964
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| ||| |||||||| |||| |||||||||| | ||||||| ||| ||||| ||||||| |||||  ||||||  ||||||||| |||||    
T  14124068 catgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttcttggaaggagcttcttgccattggagcccaaacaact 14123969  T
Q  721 tggtt 725  Q
    |||||    
T  14123968 tggtt 14123964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 24166502 - 24166398
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  ||||||  || | ||||||||||  |||||||||| | ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  24166502 catgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaact 24166403  T
Q  721 tggtt 725  Q
    |||||    
T  24166402 tggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 621 - 720
Target Start/End: Complemental strand, 20421825 - 20421727
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| | ||||||||  ||||||||||| ||||||| ||| || |||||| ||||||| | |||||||||||||    
T  20421825 catgcgcactggccaagtgttgttccccctggaaatcgaacc-agtattccccagatacgtctttgaaaggagctccttgccactgaagcccaagcaact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 675 - 725
Target Start/End: Original strand, 48317388 - 48317438
Alignment:
Q  675 aatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  48317388 aatacgtcattggaatgagctctttgccactggagcccaagcaacttggtt 48317438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 7747138 - 7747207
Alignment:
Q  116 ccttaatctcaaatgggtttgattcaaaatctcaagttagtgttgtttcaatgaagaaagatgagatttt 185  Q
    ||||||||||||||||||||| |||||||||| || |||  |||||||||||||| ||| ||||||||||    
T  7747138 ccttaatctcaaatgggtttggttcaaaatctgaacttaaggttgtttcaatgaataaaaatgagatttt 7747207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 721
Target Start/End: Original strand, 5472907 - 5473007
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||  ||||  ||||| ||| | |||||||||  ||||||||||| ||||||||| ||||||| ||||||||| |||||    
T  5472907 catgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaact 5473006  T
Q  721 t 721  Q
    |    
T  5473007 t 5473007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 7747269 - 7747345
Alignment:
Q  12 gggtttcatgcaaaatctatatttggtgttgtttcaatgaataaaaatgagattttgaatgatggtagtttgacaaa 88  Q
    |||||| || ||||||||  | |||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||    
T  7747269 gggtttgattcaaaatctgaacttggtgttgtttcagtgaataaagatgaggttttgaatgatggtagtttgtcaaa 7747345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 677 - 725
Target Start/End: Complemental strand, 14567247 - 14567199
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  14567247 tacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 14567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 665 - 725
Target Start/End: Complemental strand, 27248436 - 27248376
Alignment:
Q  665 gtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||  |||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  27248436 gtattccccggatacgtccttggaaggagctcgttgccactggagcccaagcaacttggtt 27248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 709
Target Start/End: Original strand, 36145274 - 36145362
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggag 709  Q
    ||||||||||| ||||| ||||||  |||| ||||||||||   |||||||||   |||||||||||||||||||| ||||||||||||    
T  36145274 catgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgggtacgtccttggaatgagctccttgccaccggag 36145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 627 - 726
Target Start/End: Original strand, 12703610 - 12703709
Alignment:
Q  627 cactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    ||||||||||| ||||||| | || | ||||||||  |||||||| | | ||||||||| ||| || ||| ||||||| |||||||||||||||||||||    
T  12703610 cactggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcctttgaaggatctccttgccactggagcccaagcaacttggttg 12703709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 725
Target Start/End: Original strand, 41162947 - 41163045
Alignment:
Q  627 cactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||| |||||||||||| | || | ||||||||   ||||| |||  |||||||||||||| |||||| ||| ||| ||||||||||||||||||||    
T  41162947 cactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtccttggaaggagctccttgtcactggagcccaagcaacttggtt 41163045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 626 - 695
Target Start/End: Complemental strand, 14568006 - 14567937
Alignment:
Q  626 gcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagct 695  Q
    |||||||||||| ||| ||||||||  ||||||||| | ||||||||||||||||||||| ||| |||||    
T  14568006 gcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagct 14567937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 627 - 728
Target Start/End: Complemental strand, 54524978 - 54524877
Alignment:
Q  627 cactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    ||||||| ||| ||||||| | || |||||||||  | |||||| | ||||||||| |||||| ||||||||||||||  ||||| |||||||||| |||    
T  54524978 cactggtaaagcgttgttccctctgggaatcgaatctggtattctctaaatacgtcattggaaggagctctttgccactagagcctaagcaacttgattg 54524879  T
Q  727 tt 728  Q
    ||    
T  54524878 tt 54524877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 38075485 - 38075381
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||  ||||  |||||||||   |||||| || ||||||||||||||| || ||| ||||| | ||||||||| |||||    
T  38075485 catgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaacaact 38075386  T
Q  721 tggtt 725  Q
    |||||    
T  38075385 tggtt 38075381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 53599112 - 53599008
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  |||||||  ||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||  ||||||||| |||||    
T  53599112 catgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaact 53599013  T
Q  721 tggtt 725  Q
    |||||    
T  53599012 tggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 634 - 725
Target Start/End: Complemental strand, 7000563 - 7000472
Alignment:
Q  634 caagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||| |||||||| ||| ||||||||||   ||||||||| | ||||||||||||| |||||  ||||||| | ||||||| ||||||||||    
T  7000563 caagcgttgttcttcctgggaatcgaactcggtattccccgagtacgtccttggaaggagcttcttgccactgtagcccaaacaacttggtt 7000472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 649 - 711
Target Start/End: Original strand, 15840021 - 15840083
Alignment:
Q  649 ctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcc 711  Q
    |||||||||||||   ||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  15840021 ctaggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactggagcc 15840083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 677 - 722
Target Start/End: Original strand, 6032755 - 6032800
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||    
T  6032755 tacgtccttggaaggagctccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 725
Target Start/End: Original strand, 19651559 - 19651608
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||| |||||| ||||||| ||||||||| ||||||||||    
T  19651559 atacgtccttggaaggagctcattgccactggagcccaaacaacttggtt 19651608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 689
Target Start/End: Original strand, 7246705 - 7246773
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaa 689  Q
    |||||||||||| |||| ||||||| | |||||||||||||  ||||||||||   |||||||||||||    
T  7246705 catgcgcactggccaagcgttgttcccactaggaatcgaacccagtattccccgggtacgtccttggaa 7246773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 611 - 719
Target Start/End: Complemental strand, 13552176 - 13552068
Alignment:
Q  611 taatccggctcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagc 710  Q
    |||||||||||||||| |  ||| |||||||||||  |||  |||||||||    ||||||||  |||||| ||||||| |||||| ||||||| |||||    
T  13552176 taatccggctcatgcgtagaggttaagtgttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagc 13552077  T
Q  711 ccaagcaac 719  Q
    |||| ||||    
T  13552076 ccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 677 - 725
Target Start/End: Original strand, 27531772 - 27531820
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||||| |||||| ||||||| |||| |||||||||||||||    
T  27531772 tacgtccttggaaggagctccttgccactggagtccaagcaacttggtt 27531820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 725
Target Start/End: Complemental strand, 13073589 - 13073486
Alignment:
Q  622 atgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||||| |||   |||||| || | ||||||||||   |||||| |||  ||||||||||||| |||||| |||||||  |||||||| ||||||    
T  13073589 atgcgcactggccaaacattgttccccatgggaatcgaactcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaactt 13073490  T
Q  722 ggtt 725  Q
    ||||    
T  13073489 ggtt 13073486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 677 - 727
Target Start/End: Original strand, 34667717 - 34667767
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggttgt 727  Q
    ||||||||||||| |||||| |||||||  |||||||| ||||||||||||    
T  34667717 tacgtccttggaaggagctccttgccactagagcccaaacaacttggttgt 34667767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 40842617 - 40842675
Alignment:
Q  12 gggtttcatgcaaaatctatatttggtgttgtttcaatgaataaaaatgagattttgaa 70  Q
    |||||| || ||||||||  | ||||||||||||||||||| ||| |||||||||||||    
T  40842617 gggtttgattcaaaatctcaagttggtgttgtttcaatgaagaaagatgagattttgaa 40842675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 725
Target Start/End: Original strand, 12887317 - 12887366
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||| ||||| |||||| ||||||||||| ||||||||| ||||||||||    
T  12887317 atacatccttagaatgatctctttgccactggagcccaaacaacttggtt 12887366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 702
Target Start/End: Complemental strand, 20128361 - 20128280
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgcc 702  Q
    |||||||||||| ||||  |||||| ||||  |||||||||  ||||||||||  |||||||||||||| || ||| |||||    
T  20128361 catgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccggatacgtccttggaaggaactccttgcc 20128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 703
Target Start/End: Complemental strand, 38168304 - 38168227
Alignment:
Q  626 gcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgcca 703  Q
    ||||||| |||| |||||||  | |||||||||||| | |||||||||   ||||||||||||| |||||| ||||||    
T  38168304 gcactggccaagcgttgttcctcttaggaatcgaacctggtattccccgggtacgtccttggaaggagctccttgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 620 - 725
Target Start/End: Original strand, 25842 - 25947
Alignment:
Q  620 tcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    ||||||||||||| |||| ||||||||||||||||||||||| | ||||||||| | ||||| ||||||| ||||||||||| || ||||||||| ||||    
T  25842 tcatgcgcactggccaagcgttgttctccctaggaatcgaaccttgtattccccgagtacgtacttggaaggagctctttgctactggagcccaaacaac 25941  T
Q  720 ttggtt 725  Q
    ||||||    
T  25942 ttggtt 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 3e-26; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 620 - 725
Target Start/End: Original strand, 22268087 - 22268192
Alignment:
Q  620 tcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    ||||||||||||| ||| |||||||| |||| ||||||||||   ||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||    
T  22268087 tcatgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaac 22268186  T
Q  720 ttggtt 725  Q
    ||||||    
T  22268187 ttggtt 22268192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 47341926 - 47341822
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   |||||||||   |||||||||||||||||||| ||||||| |||||||||||||||    
T  47341926 catgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactggagcccaagcaact 47341827  T
Q  721 tggtt 725  Q
    |||||    
T  47341826 tggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 48804733 - 48804629
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| || | ||||||||||   |||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  48804733 catgcgcactggccaagtgttgttccccttgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 48804634  T
Q  721 tggtt 725  Q
    |||||    
T  48804633 tggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 621 - 726
Target Start/End: Complemental strand, 43925562 - 43925457
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| |||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| |||||||||||||||    
T  43925562 catgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 43925463  T
Q  721 tggttg 726  Q
    ||||||    
T  43925462 tggttg 43925457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 18785719 - 18785615
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||||||||||||||   |||||||||   ||||||||||||| |||||  ||||||| |||||||| ||||||    
T  18785719 catgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagcccatgcaact 18785620  T
Q  721 tggtt 725  Q
    |||||    
T  18785619 tggtt 18785615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 27028329 - 27028225
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| | |||||||| | ||||| ||||  ||||| |||||||||||||| |||||||||||| |||| |||||    
T  27028329 catgcgcactggccaagtgttgttccccctggaaatcgaacctggtatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaacaact 27028230  T
Q  721 tggtt 725  Q
    |||||    
T  27028229 tggtt 27028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 623 - 725
Target Start/End: Original strand, 10047937 - 10048039
Alignment:
Q  623 tgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    |||||||||| |||||||||||| |||| ||||||||||   |||||||||  |||||||||||||| |||||| ||||||| ||||  |||||||||||    
T  10047937 tgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttg 10048036  T
Q  723 gtt 725  Q
    |||    
T  10048037 gtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 13095908 - 13095804
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||| ||||   |||||||||   |||||||||| || |||||| ||||||| |||||||||||||||    
T  13095908 catgcgcactggccaagtgttgttccccctgggaatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaact 13095809  T
Q  721 tggtt 725  Q
    |||||    
T  13095808 tggtt 13095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 21530798 - 21530694
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||  |||||||||||| |||| |||||| |||  |||||||||||  ||||||||||||| |||||| ||||||| |||||| ||||||||    
T  21530798 catgtgcactgaccaagtgttgttccccctgggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagccgaagcaact 21530699  T
Q  721 tggtt 725  Q
    |||||    
T  21530698 tggtt 21530694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 1797510 - 1797409
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||  |||| ||||||||||   ||||||| |  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  1797510 catgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccactggagcccaagcaact 1797411  T
Q  721 tg 722  Q
    ||    
T  1797410 tg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 17748441 - 17748545
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| |||| ||||||||||   ||||||||| |||||||||||||||  ||||  |||||||  |||||||| |||||    
T  17748441 catgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaact 17748540  T
Q  721 tggtt 725  Q
    |||||    
T  17748541 tggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 726
Target Start/End: Original strand, 4195261 - 4195366
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||| | ||| ||||||||  ||| | ||||||||   |||||||||  |||||||||||| | |||||| ||||||| |||||||||||||||    
T  4195261 catgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctccttgccactggagcccaagcaact 4195360  T
Q  721 tggttg 726  Q
    ||||||    
T  4195361 tggttg 4195366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 43862031 - 43862135
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  ||||||| |||| ||||||||||   |||||||||| ||||||| |||||| |||||| ||||| |  |||||||| |||||    
T  43862031 catgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaact 43862130  T
Q  721 tggtt 725  Q
    |||||    
T  43862131 tggtt 43862135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 634 - 725
Target Start/End: Original strand, 5039490 - 5039581
Alignment:
Q  634 caagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||||  ||||||||||||||   ||||||||| ||||| ||  ||||| |||||| ||||||| ||||||||| ||||||||||    
T  5039490 caagtgttgttcctcctaggaatcgaactcggtattccccgaatacatctatggaaggagctccttgccactggagcccaaacaacttggtt 5039581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 621 - 704
Target Start/End: Original strand, 36619313 - 36619396
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccac 704  Q
    ||||| |||||| |||||||||||| |||| ||||||||||   |||||||||||||||||||||| || ||| || |||||||    
T  36619313 catgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacgtccttgcaaggagttccttgccac 36619396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 19914792 - 19914865
Alignment:
Q  652 ggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||  ||||||||  |  ||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  19914792 ggaatcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 19914865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 726
Target Start/End: Original strand, 43346838 - 43346943
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||| || |||||||||||| || |  |||| ||||   |||||||||| ||||||| |||||| |||||| ||||||| |||| |||| |||||    
T  43346838 catgcgcaccggccaagtgttgttccccttgagaattgaacccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaact 43346937  T
Q  721 tggttg 726  Q
    ||||||    
T  43346938 tggttg 43346943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 4973169 - 4973273
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||| |||||||||||| ||| || ||||||||||||    |||||||| |||| ||||||||||  ||||| ||| ||  ||||||||| |||||    
T  4973169 catgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagtccttggaagaagctccttgtcagtggagcccaaacaact 4973268  T
Q  721 tggtt 725  Q
    |||||    
T  4973269 tggtt 4973273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 666 - 722
Target Start/End: Complemental strand, 11607136 - 11607080
Alignment:
Q  666 tattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    |||||||| ||||||||||||||| ||| || ||||||| |||||||||||||||||    
T  11607136 tattccccgaatacgtccttggaaggagttccttgccactggagcccaagcaacttg 11607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 22993426 - 22993530
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||| |||||||  ||| ||||||||||    ||||||||   ||||||||||||| |||||| ||||||| |||| ||||||||||    
T  22993426 catgcacactggccaagcgttgttcctcctcggaatcgaacccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaact 22993525  T
Q  721 tggtt 725  Q
    |||||    
T  22993526 tggtt 22993530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 677 - 728
Target Start/End: Complemental strand, 16802117 - 16802066
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggttgtt 728  Q
    ||||||||||||| |||||| ||||||| |||||||| ||||||||||||||    
T  16802117 tacgtccttggaaggagctcattgccactggagcccaggcaacttggttgtt 16802066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 622 - 725
Target Start/End: Complemental strand, 45448019 - 45447916
Alignment:
Q  622 atgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||| | |||| |||||||||||| | |||||||| | ||||| | |   ||||||||||||| |||||| |||||||  || ||||||||||||    
T  45448019 atgcgcactagccaagcgttgttctccctggaaatcgaacctggtatttctcgggtacgtccttggaaggagctccttgccactagaacccaagcaactt 45447920  T
Q  722 ggtt 725  Q
    ||||    
T  45447919 ggtt 45447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 621 - 723
Target Start/End: Complemental strand, 34659276 - 34659174
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| ||||||| || |  |||||||||   |||||||||   ||| ||| ||||| |||||| ||||||| ||||||||| |||||    
T  34659276 catgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaact 34659177  T
Q  721 tgg 723  Q
    |||    
T  34659176 tgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 611 - 719
Target Start/End: Complemental strand, 9685799 - 9685691
Alignment:
Q  611 taatccggctcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagc 710  Q
    |||||||||||||||| |  ||| |||||||||||  |||  |||||||||    ||||||||  |||||| ||||||| |||||| ||||||| |||||    
T  9685799 taatccggctcatgcgtagaggttaagtgttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagc 9685700  T
Q  711 ccaagcaac 719  Q
    |||| ||||    
T  9685699 ccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 22974017 - 22973913
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||| ||||||| ||||  |||||||||   ||||||||| | ||||||||||||| |||||| | ||||   |||||||| |||||    
T  22974017 catgcacactggccaagcgttgttccccctgagaatcgaacccggtattccccgagtacgtccttggaaggagctcctcgccattagagcccaaacaact 22973918  T
Q  721 tggtt 725  Q
    |||||    
T  22973917 tggtt 22973913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 42210321 - 42210425
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  |||||| || || |||||||||    ||||||| |  |||||||||||||| |||||| ||||||| |||| | ||||||||    
T  42210321 catgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttggaaagagctccttgccactggagtctaagcaact 42210420  T
Q  721 tggtt 725  Q
    |||||    
T  42210421 tggtt 42210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 725
Target Start/End: Original strand, 4228843 - 4228914
Alignment:
Q  654 aatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||| | ||||||| |  |||||||||||||| |||||| ||||| | ||||||||| ||||||||||    
T  4228843 aatcgaacctggtattcctcggatacgtccttggaaggagctccttgccgctggagcccaaacaacttggtt 4228914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 725
Target Start/End: Original strand, 34127697 - 34127783
Alignment:
Q  639 gttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||  ||| ||||||||||   |||||||||   ||||||||||||| ||| || ||||||  ||||||||||||||||||||    
T  34127697 gttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttggtt 34127783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 44336898 - 44336860
Alignment:
Q  666 tattccccaaatacgtccttggaatgagctctttgccac 704  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  44336898 tattccctagatacgtccttggaatgagctctttgccac 44336860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 26077189 - 26077085
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||| |||| ||||||| | || |||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||| |||||    
T  26077189 catgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccactggagcccaaacaact 26077090  T
Q  721 tggtt 725  Q
    |||||    
T  26077089 tggtt 26077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 1538479 - 1538375
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   ||||||||| |||||||||| |||| |||||| ||||||| ||||||||| |||||    
T  1538479 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaact 1538380  T
Q  721 tggtt 725  Q
    |||||    
T  1538379 tggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 19572772 - 19572668
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| |||||| |||   |||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  19572772 catgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 19572673  T
Q  721 tggtt 725  Q
    |||||    
T  19572672 tggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 42086375 - 42086271
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| ||||||| |||| ||||||||||   ||||||| |   ||||||||||||| |||||| |||||||||||||||||||||||    
T  42086375 catgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaact 42086276  T
Q  721 tggtt 725  Q
    |||||    
T  42086275 tggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 28857176 - 28857072
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   |||||||||   | ||||||||||| |||||| ||||||| |||||||||||||||    
T  28857176 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaact 28857077  T
Q  721 tggtt 725  Q
    |||||    
T  28857076 tggtt 28857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 5731979 - 5732083
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  ||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| |||||||||||||||    
T  5731979 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 5732078  T
Q  721 tggtt 725  Q
    |||||    
T  5732079 tggtt 5732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 598 - 725
Target Start/End: Complemental strand, 16755132 - 16755005
Alignment:
Q  598 aatagtggtcgattaatccggctcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctct 697  Q
    |||||||| ||| ||||||| |||||||||||||| |||||||||||   |||   ||||||||  ||||||||||  ||||||| |||||| ||||||     
T  16755132 aatagtggacgactaatccgactcatgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctcc 16755033  T
Q  698 ttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| | |||||||| |||||||||    
T  16755032 ttgccactgaagcccaaggaacttggtt 16755005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 714
Target Start/End: Original strand, 25417242 - 25417335
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaa 714  Q
    |||||||||||| |||| ||||||| |||| ||||||||||   ||||||||| | ||||||||||||| |||||| ||||||| |||||||||    
T  25417242 catgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaa 25417335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 726
Target Start/End: Complemental strand, 30995169 - 30995064
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||| |||| |||||||||||| |||| |||||||||| | ||||||||||  ||||||||||||| |||||| |||||||   | |||| ||||||    
T  30995169 catgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggagctccttgccactaaaacccaggcaact 30995070  T
Q  721 tggttg 726  Q
    ||||||    
T  30995069 tggttg 30995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 2485244 - 2485141
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||| || | || ||||||| |||||||||||||||  |||||||||  |||||||||||||||||||||| ||||||  |||| |||| |||||    
T  2485244 catgcgcacaggcccagggttgttc-ccctaggaatcgaacccagtattccctgaatacgtccttggaatgagctccttgccattggagtccaaacaact 2485146  T
Q  721 tggtt 725  Q
    |||||    
T  2485145 tggtt 2485141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 3653973 - 3654075
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| |||||||||  ||||||||||||   |||||| ||   ||||||||||||| |||||| ||| ||| ||||||||| |||||    
T  3653973 catgcgcactggtcaagcgttgttctc--taggaatcgaacccggtattctccgggtacgtccttggaaagagctcattgtcactggagcccaaacaact 3654070  T
Q  721 tggtt 725  Q
    |||||    
T  3654071 tggtt 3654075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 12705062 - 12704958
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| ||||||||||| |||||||  ||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| |||| |||| |||||    
T  12705062 catgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaact 12704963  T
Q  721 tggtt 725  Q
    |||||    
T  12704962 tggtt 12704958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 18136339 - 18136443
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||  |||||||||||| |||| ||||||||||   |||||| ||  ||||||| |||||| |||||| ||||||| ||||||||| |||||    
T  18136339 catgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaact 18136438  T
Q  721 tggtt 725  Q
    |||||    
T  18136439 tggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 20525886 - 20525782
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||  |||||||||||  ||| ||||||||||    ||||||||  |||| |||||| || |||||| ||||||| |||||||||||||||    
T  20525886 catgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccggatacatccttgaaaggagctccttgccactggagcccaagcaact 20525787  T
Q  721 tggtt 725  Q
    |||||    
T  20525786 tggtt 20525782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 35561877 - 35561981
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||| ||||||||| | || | | ||||||    ||||||||  ||||||| |||||| |||||||||||||| |||| ||||||||||    
T  35561877 catgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatacgtcattggaaggagctctttgccactggagtccaagcaact 35561976  T
Q  721 tggtt 725  Q
    |||||    
T  35561977 tggtt 35561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 725
Target Start/End: Original strand, 6767136 - 6767214
Alignment:
Q  647 ccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||| |||||||||   |||||||||   ||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  6767136 ccctatgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 722
Target Start/End: Original strand, 7308423 - 7308524
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||  |||| ||||||| |||| ||||||||||    |||||| |||||||||||||||||||||||| |||||||  || ||||| |||||    
T  7308423 catgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttggaatgagctccttgccactagaacccaaacaact 7308522  T
Q  721 tg 722  Q
    ||    
T  7308523 tg 7308524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 20156203 - 20156307
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatag-tattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    |||||||||| | ||||||||||||||| | |||||| || || | |||||||| ||||| || |||||| ||||||||| |||| ||||||||||||||    
T  20156203 catgcgcactagccaagtgttgttctccatgggaatcaaa-atcgatattccccgaatacatcattggaaggagctctttaccactggagcccaagcaac 20156301  T
Q  720 ttggtt 725  Q
     |||||    
T  20156302 ctggtt 20156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 665 - 726
Target Start/End: Complemental strand, 20255373 - 20255312
Alignment:
Q  665 gtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    ||||||||| | ||||||||| |||||||||| |||||||| |||||||| |||||||||||    
T  20255373 gtattccccgagtacgtccttagaatgagctccttgccaccagagcccaaacaacttggttg 20255312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 722
Target Start/End: Original strand, 35813057 - 35813158
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||||||||  || ||  |||||||||||||||   ||||||| |   |||||||||||||||||||  ||||||||| ||||||| |||||    
T  35813057 catgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcctcgggtacgtccttggaatgagcttcttgccaccgcagcccaaacaact 35813156  T
Q  721 tg 722  Q
    ||    
T  35813157 tg 35813158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 7866629 - 7866525
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||| |||||||  ||| ||||||||||   ||||||| |   ||||||||||||| |||||| ||||||| |||| ||||||||||    
T  7866629 catgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaact 7866530  T
Q  721 tggtt 725  Q
    |||||    
T  7866529 tggtt 7866525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 8513567 - 8513463
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||| ||||  |||||  |||||||||||||||   |||||||||   ||||||||||||| |||||| |||||||  ||| ||||||||||    
T  8513567 catgtgcactggccaagcattgtttcccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaact 8513468  T
Q  721 tggtt 725  Q
    |||||    
T  8513467 tggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 9812920 - 9812816
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||| |||||||  ||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| |||| |||| |||||    
T  9812920 catgcacactggccaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaact 9812821  T
Q  721 tggtt 725  Q
    |||||    
T  9812820 tggtt 9812816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 728
Target Start/End: Complemental strand, 23383641 - 23383589
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggttgtt 728  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||||||||||    
T  23383641 atacgtccttggaaggagctccttgccactggagcccaaacaacttggttgtt 23383589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 721
Target Start/End: Original strand, 25950622 - 25950741
Alignment:
Q  602 gtggtcgattaatccggctcatgcgcactggtcaagtgttgttctccctag-gaatcgaacatagtattccccaaatacgtccttggaatgagctctttg 700  Q
    |||| ||| |||||||||||||||||||||| ||||||||||| ||||| |  |||| ||| |  |||||||| | ||||||||| ||| |||||| ||     
T  25950622 gtggacgactaatccggctcatgcgcactggccaagtgttgtt-tcccttgaaaatcaaacctgatattccccgagtacgtcctttgaaggagctcctta 25950720  T
Q  701 ccaccggagcccaagcaactt 721  Q
    |||| ||||||||| ||||||    
T  25950721 ccactggagcccaaacaactt 25950741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 30349627 - 30349523
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||   |||||| |||||| |||| |||   |||||||||  |||||||||||||| || ||| ||||||| ||||||||| |||||    
T  30349627 catgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaacaact 30349528  T
Q  721 tggtt 725  Q
    |||||    
T  30349527 tggtt 30349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 35403571 - 35403675
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||| ||| |||| ||||||| ||||  |||||||||   ||||| ||| | ||||||||||||| |||||| ||||||| ||||||||| ||| |    
T  35403571 catgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagcccaaacaagt 35403670  T
Q  721 tggtt 725  Q
    |||||    
T  35403671 tggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 38897778 - 38897881
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| |||| | ||||||||   |||||||||| ||||||||||| || |||||| |||||||  |||  |||||||||    
T  38897778 catgcgcactggccaagcgttgttc-ccctggaaatcgaacccggtattccccatatacgtccttgtaaagagctccttgccacttgagttcaagcaact 38897876  T
Q  721 tggtt 725  Q
    |||||    
T  38897877 tggtt 38897881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 650
Target Start/End: Complemental strand, 40060363 - 40060315
Alignment:
Q  602 gtggtcgattaatccggctcatgcgcactggtcaagtgttgttctccct 650  Q
    |||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  40060363 gtggacgattaatccggctcatgcgcactggccaagtgttgttccccct 40060315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 679 - 725
Target Start/End: Complemental strand, 28856967 - 28856921
Alignment:
Q  679 cgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  28856967 cgtccttggaaggagctccttgccactggagcccaagcaacttggtt 28856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 714
Target Start/End: Complemental strand, 1899049 - 1898956
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaa 714  Q
    |||||||||||| |||| ||||||| |||| ||||||||||   |||||||||   ||| ||||||||| |||||| ||||||| | |||||||    
T  1899049 catgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgtagcccaa 1898956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 725
Target Start/End: Complemental strand, 5079324 - 5079275
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||| ||||||| |||||||||||||||||| ||||| ||||||||||    
T  5079324 atacgtgcttggaaggagctctttgccaccggaacccaaacaacttggtt 5079275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 20682676 - 20682781
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatg-agctctttgccaccggagcccaagcaac 719  Q
    |||||||||||| |||| ||||||| |||| | |||| |||  | ||||||||   ||||||||| ||||| ||||| ||| ||| ||||||||||||||    
T  20682676 catgcgcactggccaagcgttgttccccctggaaatctaacccaatattccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaac 20682775  T
Q  720 ttggtt 725  Q
    ||||||    
T  20682776 ttggtt 20682781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 42861277 - 42861381
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaa-tcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    |||||||||||| ||||||||||| ||||| |||| | ||||    ||||||||  ||| ||||||||||||||||| ||||||| ||||||||| |||     
T  42861277 catgcgcactggccaagtgttgtt-tccctgggaaattgaacccgatattccccggatatgtccttggaatgagctccttgccactggagcccaaacaat 42861375  T
Q  720 ttggtt 725  Q
    ||||||    
T  42861376 ttggtt 42861381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 665 - 725
Target Start/End: Complemental strand, 14728086 - 14728026
Alignment:
Q  665 gtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||| |||||| | | ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  14728086 gtatttcccaaaaatgaccttggaatgagctcattgccactggagcccaaacaacttggtt 14728026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 704
Target Start/End: Complemental strand, 13664308 - 13664225
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccac 704  Q
    |||||||||||| |||||||||||| ||||   |||||||    |||||||| | |||||||||||||| |||||| |||||||    
T  13664308 catgcgcactggccaagtgttgttccccctgataatcgaatccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 676 - 725
Target Start/End: Original strand, 14974438 - 14974485
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||| |||||||||| ||||||  ||||||||||||||||||||    
T  14974438 atacgtccttagaatgagctccttgcca--ggagcccaagcaacttggtt 14974485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 620 - 686
Target Start/End: Complemental strand, 21149783 - 21149717
Alignment:
Q  620 tcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttg 686  Q
    |||||||||||||||||  ||||||| ||||   |||||||| | ||||||| ||||||||||||||    
T  21149783 tcatgcgcactggtcaaacgttgttccccctgaaaatcgaacctggtattcctcaaatacgtccttg 21149717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 3e-23; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 32873609 - 32873712
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| |||||||||||| ||||||||||||||||||||||| | ||||||||    |||||||||||||||||||| ||||||| ||||||||| |||||    
T  32873609 catgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattcccggg-tacgtccttggaatgagctccttgccactggagcccaaacaact 32873707  T
Q  721 tggtt 725  Q
    |||||    
T  32873708 tggtt 32873712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 6462459 - 6462358
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||||||||  |||||||||   |||||||||| |||||||||||||| |||||| |||||||  ||||||||||||||    
T  6462459 catgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctccttgccactagagcccaagcaact 6462360  T
Q  721 tg 722  Q
    ||    
T  6462359 tg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 51683014 - 51683118
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| ||||||| |||| |||||||||| | |||||||||  ||||||| |||||| |||||| | ||||| ||||||||| |||||    
T  51683014 catgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaacaact 51683113  T
Q  721 tggtt 725  Q
    |||||    
T  51683114 tggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 54261273 - 54261169
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  ||||||||||||||   ||||||||||  ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  54261273 catgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaact 54261174  T
Q  721 tggtt 725  Q
    |||||    
T  54261173 tggtt 54261169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 29127966 - 29127862
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  ||||||||||||||||| | ||||||||    ||||||||| |||||||||||||| || ||| ||||||| ||||||||| |||||    
T  29127966 catgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaact 29127867  T
Q  721 tggtt 725  Q
    |||||    
T  29127866 tggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 29135960 - 29135856
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| |||||||||    |||||||||  ||||||||||||||  ||||| ||||||| ||||||||||||| |    
T  29135960 catgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagctccttgccactggagcccaagcaatt 29135861  T
Q  721 tggtt 725  Q
    |||||    
T  29135860 tggtt 29135856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 35316003 - 35315899
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||    ||||| ||   ||||||||||||| |||||||||||||| ||||||||| |||||    
T  35316003 catgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaact 35315904  T
Q  721 tggtt 725  Q
    |||||    
T  35315903 tggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 48342067 - 48341963
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||| | |||| ||||||| |||||||||| ||||   ||||||||||  ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  48342067 catgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaact 48341968  T
Q  721 tggtt 725  Q
    |||||    
T  48341967 tggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 621 - 724
Target Start/End: Original strand, 35923683 - 35923786
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  ||||||| ||||| ||||||||| | |||||| |||  |||||||||||||||||||| |||||||  |||||||| |||||    
T  35923683 catgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccaggtacgtccttggaatgagctcattgccactagagcccaaacaact 35923782  T
Q  721 tggt 724  Q
    ||||    
T  35923783 tggt 35923786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 726
Target Start/End: Complemental strand, 3755617 - 3755512
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||  |||||||  ||| |||||||||    |||||||||  ||||||||||| || |||||||||||||| |||| ||||||||||    
T  3755617 catgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaagagctctttgccactggagtccaagcaact 3755518  T
Q  721 tggttg 726  Q
    ||||||    
T  3755517 tggttg 3755512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 25295007 - 25294903
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctag-gaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    |||||||||||| ||||||||||| |||| || ||||| |||   |||||||||  |||||||||||||| |||||| ||||||| ||||||||||||||    
T  25295007 catgcgcactggccaagtgttgtt-tccccagagaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 25294909  T
Q  720 ttggtt 725  Q
    ||||||    
T  25294908 ttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 33251678 - 33251605
Alignment:
Q  652 ggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||   ||||||||| ||||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  33251678 ggaatcgaacccggtattcccctaatacgtccttggaaggagctcattgccaccggagcccaaacaacttggtt 33251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 628 - 725
Target Start/End: Complemental strand, 40944923 - 40944826
Alignment:
Q  628 actggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||| ||||||||||| |||| ||||||||||   |||||| |   |||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  40944923 actggttaagtgttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccaccggagcccaagcaacttggtt 40944826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 928647 - 928543
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||||||||||| ||||  ||||||||  | |||||||| |  |||||||||||||||||||| ||||||   ||||| || |||||    
T  928647 catgcgcactggtcaagtgttgttccccctgagaatcgaatctggtattccctaggtacgtccttggaatgagctccttgccagttgagcctaaacaact 928548  T
Q  721 tggtt 725  Q
    |||||    
T  928547 tggtt 928543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 29762215 - 29762319
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||  ||||  |||||| ||    |||||||| ||||| ||||||||| |||||| ||||||| |||||||||||||||    
T  29762215 catgcgcactggccaagtgttgttgcccctgagaatcggacccgatattccccgaatacatccttggaaggagctccttgccactggagcccaagcaact 29762314  T
Q  721 tggtt 725  Q
    |||||    
T  29762315 tggtt 29762319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 30045868 - 30045764
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| |||||||||||||||   ||||||||||  ||||| |||  || |||||| |||||||  ||||||||||||||    
T  30045868 catgcgcactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttgagcccaagcaact 30045769  T
Q  721 tggtt 725  Q
    |||||    
T  30045768 tggtt 30045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 49198398 - 49198294
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||||||||||||||   |||||||||  ||| ||||||||||  | ||| ||| ||| ||||||||| |||||    
T  49198398 catgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgtccttggaagaaactccttgtcactggagcccaaacaact 49198299  T
Q  721 tggtt 725  Q
    |||||    
T  49198298 tggtt 49198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 626 - 725
Target Start/End: Original strand, 11025438 - 11025535
Alignment:
Q  626 gcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| |||||||||| | |||| |||||||||| | |||||||||| |||||||||||||| | |||| || |||| ||||||||||||||||||||    
T  11025438 gcactggccaagtgttgtcc-ccctcggaatcgaacctggtattccccagatacgtccttggaa-gggctccttaccactggagcccaagcaacttggtt 11025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 7310763 - 7310867
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| ||| || |||||||||||| | || ||||||||||   ||||||| ||  ||||| ||||||| |||||| ||||||||||||||||| |||||    
T  7310763 catgcacaccgggcaagtgttgttcccactgggaatcgaacccggtattcctcaggtacgttcttggaaggagctcattgccaccggagcccaatcaact 7310862  T
Q  721 tggtt 725  Q
    |||||    
T  7310863 tggtt 7310867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 7328891 - 7328787
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   ||||| |||   ||||||||||||| || ||| |||||||  |||| |||||||||    
T  7328891 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagcaact 7328792  T
Q  721 tggtt 725  Q
    |||||    
T  7328791 tggtt 7328787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 26207861 - 26207965
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||| ||||||| || | ||||||||||   |||||||||   ||| ||||||||| |||||| ||||||| |||||||||||||||    
T  26207861 catgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaact 26207960  T
Q  721 tggtt 725  Q
    |||||    
T  26207961 tggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 42412834 - 42412938
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||| | |||| ||||||| |||  ||||||||||   |||||||||  |||||||||||||| |||||| ||||||  |||||||||||||||    
T  42412834 catgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccattggagcccaagcaact 42412933  T
Q  721 tggtt 725  Q
    |||||    
T  42412934 tggtt 42412938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 45877501 - 45877397
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||| |||||||||||  |||| | ||||||||   |||||||||  |||||||||||||| | |||| ||||||| ||||||||| |||||    
T  45877501 catgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggctccttgccactggagcccaaacaact 45877402  T
Q  721 tggtt 725  Q
    |||||    
T  45877401 tggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 47471878 - 47471775
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||| | ||||  |||||| |||| ||||||||||   |||||||| |  ||||||||||||| ||||||||||||||  ||||||||||||||    
T  47471878 catgcgcactagccaagcattgttc-ccctgggaatcgaacccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaagcaact 47471780  T
Q  721 tggtt 725  Q
    |||||    
T  47471779 tggtt 47471775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 622 - 725
Target Start/End: Original strand, 7612987 - 7613090
Alignment:
Q  622 atgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||| | |||| ||||||| |||| ||||||||||   ||||||||||| ||||||||||||| |||||| ||||||| | || |||| || |||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgaagtccaaacagctt 7613086  T
Q  722 ggtt 725  Q
    ||||    
T  7613087 ggtt 7613090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 621 - 720
Target Start/End: Complemental strand, 49082871 - 49082772
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||  ||| |||||||||||| ||||||||||   |||||||||  |||||||||| ||| ||||||  |||||| ||||||||| |||||    
T  49082871 catgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactggagcccaaacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 726
Target Start/End: Original strand, 47749165 - 47749269
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| |||||||||||||||   ||||||||   ||||||||||||||  ||||| || |||| ||||||||| ||| |    
T  47749165 catgcgcactggccaagagttgttc-ccctaggaatcgaacccggtattccctggatacgtccttggaagaagctcattaccactggagcccaaacaatt 47749263  T
Q  721 tggttg 726  Q
    ||||||    
T  47749264 tggttg 47749269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 10040603 - 10040500
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| ||||  |||||||||    ||||||||   ||||||||| ||| |||||| ||||||| |||||||||||||||    
T  10040603 catgcgcactggccaagcgttgttc-ccctgagaatcgaacccgatattccccgggtacgtccttagaaggagctccttgccactggagcccaagcaact 10040505  T
Q  721 tggtt 725  Q
    |||||    
T  10040504 tggtt 10040500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 721
Target Start/End: Original strand, 30767307 - 30767407
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||||||||||| |||| | ||||||||    |||||||||  ||| ||||||||| || ||| ||||||| |||||||||||||||    
T  30767307 catgcacactggccaagtgttgttccccctggaaatcgaacccgatattccccaggtacatccttggaaggaactccttgccactggagcccaagcaact 30767406  T
Q  721 t 721  Q
    |    
T  30767407 t 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 624 - 696
Target Start/End: Complemental strand, 53649771 - 53649699
Alignment:
Q  624 gcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctc 696  Q
    ||||||||| |||||||||||| ||||  |||||||||   ||||||||| ||||||||||||||| ||||||    
T  53649771 gcgcactggccaagtgttgttcaccctgagaatcgaacccggtattccccgaatacgtccttggaaggagctc 53649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 630 - 721
Target Start/End: Original strand, 30735014 - 30735105
Alignment:
Q  630 tggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    |||||||| ||||||| ||||  |||||||||   ||||||||| | | |||||||||||||||||| |||||||  |||||||| ||||||    
T  30735014 tggtcaagcgttgttccccctgagaatcgaactcggtattccccgagtgcgtccttggaatgagctccttgccactagagcccaaacaactt 30735105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 725
Target Start/End: Complemental strand, 28242270 - 28242221
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| |||||| ||||||||| |||||||||| ||||||||||||||    
T  28242270 atacgtcattggaaggagctctttaccaccggagctcaagcaacttggtt 28242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 726
Target Start/End: Original strand, 46529974 - 46530035
Alignment:
Q  665 gtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    ||||||||||  |||||||||| || |||||| ||||||| ||||||||| |||||||||||    
T  46529974 gtattccccaggtacgtccttgaaaggagctccttgccactggagcccaaacaacttggttg 46530035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 11687169 - 11687273
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| ||||  |||||| ||||  ||||| |||   |||||| |||  ||||||||||||| |||||  ||||||| ||||||||| |||||    
T  11687169 catgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagcccaaacaact 11687268  T
Q  721 tggtt 725  Q
    |||||    
T  11687269 tggtt 11687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 665 - 725
Target Start/End: Complemental strand, 13893929 - 13893869
Alignment:
Q  665 gtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||  | |||||||||||| |||||| ||||||| ||||||||| ||||||||||    
T  13893929 gtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 661
Target Start/End: Complemental strand, 26043859 - 26043819
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaac 661  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  26043859 catgcgcactggccaagtgttgttctccctgggaatcgaac 26043819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 677 - 725
Target Start/End: Original strand, 37092621 - 37092669
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  37092621 tacgtccttggaagaagctccttgccactggagcccaagcaacttggtt 37092669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 677 - 725
Target Start/End: Complemental strand, 39849063 - 39849015
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  39849063 tacgtccttggaaggagctccttgccactggagcccaagcgacttggtt 39849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 45450507 - 45450608
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||||||||  |||||| |||| | |||| |||  |||||||  |  ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  45450507 catgcgcactggtcaagcattgttc-ccctggaaatcaaacccagtattctacggatacgtc-ttggaatgagctctt-gccactggagcccaagcaact 45450603  T
Q  721 tggtt 725  Q
    |||||    
T  45450604 tggtt 45450608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 51060341 - 51060445
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| ||||  |||||||||    ||||||||  |||  ||||||||| ||||| |||||||| |||| |||| |||||    
T  51060341 catgcgcactgaccaagtgttgttccccctgagaatcgaacccgatattccccggatagatccttggaaggagctatttgccactggagtccaaacaact 51060440  T
Q  721 tggtt 725  Q
    |||||    
T  51060441 tggtt 51060445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 55069739 - 55069843
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||| |||  ||||||| |  |||||||| |||  |||||||||  |||||||||||| || |||||| ||| ||| ||||||||| |||||    
T  55069739 catgtgcactggccaaacgttgttccctataggaatcaaacccagtattccctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaact 55069838  T
Q  721 tggtt 725  Q
    |||||    
T  55069839 tggtt 55069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 709
Target Start/End: Complemental strand, 28997738 - 28997655
Alignment:
Q  626 gcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggag 709  Q
    ||||||||||| |||||||| ||||| |||||||||   ||||||||    ||||||||||||| |||||| |||| |||||||    
T  28997738 gcactggtcaaatgttgttccccctaagaatcgaaccatgtattccctgtgtacgtccttggaaggagctccttgcaaccggag 28997655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 661
Target Start/End: Complemental strand, 50682543 - 50682484
Alignment:
Q  602 gtggtcgattaatccggctcatgcgcactggtcaagtgttgttctccctaggaatcgaac 661  Q
    |||| ||| ||||||||||  |||||||||| |||| |||||||||||||| ||||||||    
T  50682543 gtggacgactaatccggcttttgcgcactggccaagcgttgttctccctagaaatcgaac 50682484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 628 - 726
Target Start/End: Complemental strand, 7650267 - 7650169
Alignment:
Q  628 actggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    ||||| |||||||||||| |||| | ||||||||   |||||||| || ||| |||||| || || ||| ||||||| ||| ||||| |||||||||||    
T  7650267 actggccaagtgttgttccccctggaaatcgaacccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttggttg 7650169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 721
Target Start/End: Original strand, 47303604 - 47303649
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||||||||  ||||| || |||||||||||||||||||||    
T  47303604 atacgtccttggaaaaagctccttaccaccggagcccaagcaactt 47303649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 3e-23; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 331548 - 331444
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| |||||||||||||||    
T  331548 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaagagctcattgccactggagcccaagcaact 331449  T
Q  721 tggtt 725  Q
    |||||    
T  331448 tggtt 331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 621 - 709
Target Start/End: Original strand, 25540463 - 25540551
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggag 709  Q
    |||||||||||| |||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  25540463 catgcgcactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 624 - 726
Target Start/End: Original strand, 18902592 - 18902694
Alignment:
Q  624 gcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttgg 723  Q
    |||||||||||||| ||||||| || | ||||||||||   ||||||||| | ||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  18902592 gcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 18902691  T
Q  724 ttg 726  Q
    |||    
T  18902692 ttg 18902694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 7747321 - 7747217
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||  |||||||  ||||||||||||||   |||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  7747321 catgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 7747222  T
Q  721 tggtt 725  Q
    |||||    
T  7747221 tggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 8410178 - 8410074
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||    ||||| ||   ||||||||||||| |||||| ||||||| |||||||||||||||    
T  8410178 catgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 8410079  T
Q  721 tggtt 725  Q
    |||||    
T  8410078 tggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 34356253 - 34356149
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| |||| | ||||||||   |||||||||| ||||||||||||||  ||||| ||||||| ||||||||| |||||    
T  34356253 catgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctccttgccactggagcccaaacaact 34356154  T
Q  721 tggtt 725  Q
    |||||    
T  34356153 tggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 38005449 - 38005345
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| || | ||||||||||  ||||||||||   ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  38005449 catgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaact 38005350  T
Q  721 tggtt 725  Q
    |||||    
T  38005349 tggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 620 - 725
Target Start/End: Complemental strand, 15079531 - 15079426
Alignment:
Q  620 tcatgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    |||||| ||||||||||| ||||||| |||| | ||||||||   |||||||||   ||||||||||||| | | || ||||||||||||||||||||||    
T  15079531 tcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgttccttgccaccggagcccaagcaac 15079432  T
Q  720 ttggtt 725  Q
    ||||||    
T  15079431 ttggtt 15079426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 20612594 - 20612699
Alignment:
Q  621 catgcgcactggtcaagtgttgttctc-cctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    |||||||||||| |||||||||||| | |||  |||||||||   ||||||||| |||||  |||||||| |||||| ||||||| ||||||||||||||    
T  20612594 catgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaac 20612693  T
Q  720 ttggtt 725  Q
    ||||||    
T  20612694 ttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 714
Target Start/End: Complemental strand, 25549775 - 25549682
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaa 714  Q
    |||| ||||| | ||| ||||||| |||||| |||||||||  |||||||||||||||||| ||||||| |||||| ||||||| |||||||||    
T  25549775 catgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatacgtacttggaaggagctccttgccactggagcccaa 25549682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 2550915 - 2550811
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||  |||||||||||  ||| ||||||||||    ||||||||  ||||||||||| || |||||| ||||||| |||||||||||||||    
T  2550915 catgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaact 2550816  T
Q  721 tggtt 725  Q
    |||||    
T  2550815 tggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 3643946 - 3644050
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  | ||| |||| |||   |||||||||  ||||||||||||||||||||| || |||| |||||||||||||||    
T  3643946 catgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttggaatgagctcctttccactggagcccaagcaact 3644045  T
Q  721 tggtt 725  Q
    |||||    
T  3644046 tggtt 3644050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 6358210 - 6358314
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| | |||||||  | |||||||||  |||||||||| |||||||||  ||||||| ||||||||| |||||    
T  6358210 catgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaact 6358309  T
Q  721 tggtt 725  Q
     ||||    
T  6358310 cggtt 6358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 14169668 - 14169772
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||||||||||| |||   |||||||||    |||||||| ||||||||||||||| || ||| ||| ||| ||||||||| |||||    
T  14169668 catgcgcactggtcaagtgttgttcccccggagaatcgaacccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaacaact 14169767  T
Q  721 tggtt 725  Q
    |||||    
T  14169768 tggtt 14169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 22593181 - 22593078
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  ||||||| |||| ||||||||||  ||||||||||   ||||||||||||| |||||| ||||||| ||||| |||||||||    
T  22593181 catgcgcactggccaac-gttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagctccttgccactggagcacaagcaact 22593083  T
Q  721 tggtt 725  Q
    |||||    
T  22593082 tggtt 22593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 42770710 - 42770814
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| ||||  |||| ||||   ||||| | |  |||||||||||||| |||||||||||||| |||||||||||||||    
T  42770710 catgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttggaaggagctctttgccactggagcccaagcaact 42770809  T
Q  721 tggtt 725  Q
    |||||    
T  42770810 tggtt 42770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 621 - 696
Target Start/End: Original strand, 15234120 - 15234195
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctc 696  Q
    ||||||||||||||||||||||||| ||||  ||||||||| |||||||||||   ||||||||||||| ||||||    
T  15234120 catgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgggtacgtccttggaaggagctc 15234195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 726
Target Start/End: Complemental strand, 12864271 - 12864166
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||||||||||| |||| | |||||||    ||||||||| |||||||| |||||| |||||| ||| ||| ||||||||| |||||    
T  12864271 catgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaact 12864172  T
Q  721 tggttg 726  Q
    ||||||    
T  12864171 tggttg 12864166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 21286491 - 21286390
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| ||||||   ||| ||||||||||   |||||||||  |||||||||||||| |||||| ||||||| ||||| ||| |||||    
T  21286491 catgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaact 21286392  T
Q  721 tg 722  Q
    ||    
T  21286391 tg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 622 - 725
Target Start/End: Complemental strand, 11069924 - 11069821
Alignment:
Q  622 atgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||||| |||  ||||||| |||| |||||||||| | |||||||||   |||||||||||||||||||| | ||||  |||||| || ||||||    
T  11069924 atgcgcactggccaaacgttgttccccctcggaatcgaacctggtattccccgggtacgtccttggaatgagctcctagccattggagccaaaacaactt 11069825  T
Q  722 ggtt 725  Q
    ||||    
T  11069824 ggtt 11069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 631 - 725
Target Start/End: Complemental strand, 44193516 - 44193422
Alignment:
Q  631 ggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| ||||||| |||||  |||||||| | ||||||| |  ||||||| |||||| |||||| ||||||| |||| |||||||||||||||    
T  44193516 ggtcaagcgttgttccccctaaaaatcgaacctggtattcctcggatacgtcattggaaagagctcattgccactggagtccaagcaacttggtt 44193422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 35946785 - 35946685
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| || ||| |||| ||||||| |||||||||||||||   |||||||||  |||||||||| |||||||||| || |||| | |||||||||||||    
T  35946785 catgcacaatggccaagcgttgttc-ccctaggaatcgaactcggtattccccggatacgtccttagaatgagctccttaccacggaagcccaagcaact 35946687  T
Q  721 tg 722  Q
    ||    
T  35946686 tg 35946685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 726
Target Start/End: Original strand, 41031965 - 41032069
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||||||||||| |||| ||||||||||   || |||||    ||||||||||||| |||||| ||||||| ||||||||||||| |    
T  41031965 catgcacactggccaagtgttgttccccctgggaatcgaacccggtgttccctgg-tacgtccttggaaggagctccttgccactggagcccaagcaatt 41032063  T
Q  721 tggttg 726  Q
    ||||||    
T  41032064 tggttg 41032069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 624 - 725
Target Start/End: Complemental strand, 44139528 - 44139427
Alignment:
Q  624 gcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttgg 723  Q
    ||||||||| |||| ||||||| |||| ||||||||||   |||||||||| || | ||||||||| ||| || |  |||| ||||||||||||||||||    
T  44139528 gcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaagcaacttgg 44139429  T
Q  724 tt 725  Q
    ||    
T  44139428 tt 44139427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 10026675 - 10026779
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  ||||||| ||||  |||||||||   |||||  || | ||||||||||||| |||||| ||||||  |||||||||||||||    
T  10026675 catgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttggaaggagctccttgccattggagcccaagcaact 10026774  T
Q  721 tggtt 725  Q
    |||||    
T  10026775 tggtt 10026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 21180373 - 21180477
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||| ||||||||||||||| | |||||||||    ||||||  |   ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  21180373 catgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagctccttgccactggagcccaaacaact 21180472  T
Q  721 tggtt 725  Q
    |||||    
T  21180473 tggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 621 - 724
Target Start/End: Complemental strand, 41187896 - 41187793
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| |||||| | |||| |||| |||    ||||||| |  |||||||||||||| |||||| ||||||||| ||||||  |||||    
T  41187896 catgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgtccttggaaggagctccttgccaccgaagcccagacaact 41187797  T
Q  721 tggt 724  Q
    ||||    
T  41187796 tggt 41187793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 725
Target Start/End: Original strand, 23500795 - 23500844
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| |||||| |||||| ||||||||||||||||| ||||||||||    
T  23500795 atacgtctttggaaggagctccttgccaccggagcccaaacaacttggtt 23500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 725
Target Start/End: Complemental strand, 44945598 - 44945537
Alignment:
Q  664 agtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| || | ||||||||||||| |||||| |||||||  |||||||||||||||||||    
T  44945598 agtattctccgagtacgtccttggaaggagctccttgccacttgagcccaagcaacttggtt 44945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 2528400 - 2528504
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||  |||| ||||||| |||| ||||||||||   || |||| | | ||||||||||||| |||||| ||||||| ||||||||| ||| |    
T  2528400 catgcacactgaccaagcgttgttccccctgggaatcgaacccggtgttcctcgagtacgtccttggaaggagctcattgccactggagcccaaacaatt 2528499  T
Q  721 tggtt 725  Q
    |||||    
T  2528500 tggtt 2528504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 9360807 - 9360911
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  ||||||  | |||| |||||||| | |||||||||   ||||||||||||||||| || ||||| | | ||||||||||| |    
T  9360807 catgcgcactggccaaacgttgtttcctctagtaatcgaacctggtattccccgggtacgtccttggaatgagatccttgcccctgaagcccaagcaatt 9360906  T
Q  721 tggtt 725  Q
    |||||    
T  9360907 tggtt 9360911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 10669639 - 10669535
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||||||| |||||| |||   |||  |||||  ||||||||||||| ||| || || || | |||| ||||||||||    
T  10669639 catgcgcactggccaagcgttgttctccctgggaatcaaacccggtagcccccaggtacgtccttggaaggagatccttacccctggagtccaagcaact 10669540  T
Q  721 tggtt 725  Q
    |||||    
T  10669539 tggtt 10669535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 38962810 - 38962706
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  |||   ||||||||   |||||||||  ||||||||||| ||||||||| || |||| |||| |||| |||||    
T  38962810 catgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtccttgaaatgagctccttaccactggagtccaaacaact 38962711  T
Q  721 tggtt 725  Q
    |||||    
T  38962710 tggtt 38962706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 44773310 - 44773208
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||  |||||| ||||||| |||||||| ||| ||||||| |||||||||||| || |||| | |||||||  ||| ||||||||||    
T  44773310 catgcacactggccaaacgttgttttccctag-aatcgaacctag-attccccgaatacgtccttgaaaggagcgccttgccactagagtccaagcaact 44773213  T
Q  721 tggtt 725  Q
    |||||    
T  44773212 tggtt 44773208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 725
Target Start/End: Complemental strand, 29422249 - 29422158
Alignment:
Q  634 caagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||| | || | ||||||||  ||||||||||   |||||||||| || |||||| |||| || ||||||||| ||||||||||    
T  29422249 caagtgttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttggtt 29422158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 696
Target Start/End: Original strand, 34346346 - 34346421
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctc 696  Q
    ||||| |||||| |||||||||||| ||||   |||| |||  |||||||||||  ||||||||||||||||||||    
T  34346346 catgcacactggccaagtgttgttccccctgataatcaaacccagtattccccaggtacgtccttggaatgagctc 34346421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 678 - 725
Target Start/End: Original strand, 40969031 - 40969078
Alignment:
Q  678 acgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||||||    
T  40969031 acgtccttggaatgaactcattgccactagagcccaagcaacttggtt 40969078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 704
Target Start/End: Complemental strand, 41220682 - 41220599
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccac 704  Q
    |||||||||||| |||| |||||||  ||| ||||||||||   |||||||||   ||||||||||||| |||||| |||||||    
T  41220682 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 41220599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 611 - 649
Target Start/End: Complemental strand, 792223 - 792185
Alignment:
Q  611 taatccggctcatgcgcactggtcaagtgttgttctccc 649  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  792223 taatccggctcatgcgcactggccaagcgttgttctccc 792185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 676 - 722
Target Start/End: Complemental strand, 29802803 - 29802757
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    ||||||| |||||| |||||| |||||||||||| ||||||||||||    
T  29802803 atacgtctttggaaagagctcattgccaccggagtccaagcaacttg 29802757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 735
Target Start/End: Original strand, 3598856 - 3598925
Alignment:
Q  666 tattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggttgttcatattt 735  Q
    |||||||| ||||||||||||||| |||||| ||| ||  ||||||| | ||||||||||| | ||||||    
T  3598856 tattccccgaatacgtccttggaaggagctcattgtcagtggagccccaacaacttggttggtgatattt 3598925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 725
Target Start/End: Original strand, 10046590 - 10046639
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||| ||||||| |||||| ||||||  ||||||||||||||||||||    
T  10046590 atacgttcttggaaggagctccttgccattggagcccaagcaacttggtt 10046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 2e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 621 - 726
Target Start/End: Original strand, 5253282 - 5253387
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| |||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||  |||||||||||||||    
T  5253282 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaact 5253381  T
Q  721 tggttg 726  Q
    ||||||    
T  5253382 tggttg 5253387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 21898699 - 21898595
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| |||||||  ||| ||||||||||   |||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||    
T  21898699 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 21898600  T
Q  721 tggtt 725  Q
    |||||    
T  21898599 tggtt 21898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 639 - 725
Target Start/End: Complemental strand, 13468966 - 13468880
Alignment:
Q  639 gttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| |||||||||| |||| | |||||||||  |||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  13468966 gttgttccccctaggaattgaacctggtattccccggatacgtccttggaaggagctccttgccaccagagcccaagcaacttggtt 13468880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 628 - 725
Target Start/End: Original strand, 9179802 - 9179899
Alignment:
Q  628 actggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||||||| |||| ||||||||||   ||||||||    |||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  9179802 actggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 9179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 621 - 722
Target Start/End: Original strand, 13036063 - 13036164
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||||||||||| ||||   ||||||||    |||||||| ||||||||||||||| |||||| ||||||| |||||||||||||||    
T  13036063 catgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaact 13036162  T
Q  721 tg 722  Q
    ||    
T  13036163 tg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 14107417 - 14107521
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| |||||||||||| |||||||  ||| ||||||||||   ||||||||| |||||||| |||||| |||||| ||||||| ||||||||| |||||    
T  14107417 catgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaact 14107516  T
Q  721 tggtt 725  Q
    |||||    
T  14107517 tggtt 14107521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 19089549 - 19089445
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| |||||| |||||||||||| |||| |||||| ||| | ||||||| |  ||||||||||| ||||||||| |||| || |||||||||||||||    
T  19089549 catgctcactggccaagtgttgttccccctgggaatcaaacctggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaact 19089450  T
Q  721 tggtt 725  Q
    |||||    
T  19089449 tggtt 19089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 24671925 - 24672029
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| ||||||||||||||||||| | || ||||| ||||   |||||| ||| ||||||||||| || |||||| ||||||| |||||||||||||||    
T  24671925 catgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctccttgccactggagcccaagcaact 24672024  T
Q  721 tggtt 725  Q
    |||||    
T  24672025 tggtt 24672029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 725
Target Start/End: Original strand, 3030695 - 3030781
Alignment:
Q  639 gttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||| |||| ||||||||||    ||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  3030695 gttgttccccctgggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 3030781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 623 - 725
Target Start/End: Complemental strand, 8938760 - 8938658
Alignment:
Q  623 tgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttg 722  Q
    |||||||||||||||||||||||  ||| ||||||||||  ||||||||||  ||| ||| |||||| |||||| ||| ||| ||||||||| |||||||    
T  8938760 tgcgcactggtcaagtgttgttcctcctgggaatcgaaccaagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttg 8938661  T
Q  723 gtt 725  Q
    |||    
T  8938660 gtt 8938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 635 - 725
Target Start/End: Original strand, 21016824 - 21016914
Alignment:
Q  635 aagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||| ||||||||||||   |||||||||   ||||||| ||||| |||||| ||||||| ||||||||||||||||||||    
T  21016824 aagtgttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagcccaagcaacttggtt 21016914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 2271362 - 2271464
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||  ||| |||||||||  |  |||||||||   ||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||||    
T  2271362 catgcgcactggctaagcgttgttctc--tgagaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaact 2271459  T
Q  721 tggtt 725  Q
    |||||    
T  2271460 tggtt 2271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 9147352 - 9147251
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||| ||||||||||||||| |||| |||| ||||||||||    |||||||||  |||||||||||||||||||| || |||| ||||||||| |||||    
T  9147352 catgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggagcccaaacaact 9147253  T
Q  721 tg 722  Q
    ||    
T  9147252 tg 9147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 627 - 725
Target Start/End: Original strand, 6606162 - 6606260
Alignment:
Q  627 cactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||| |||||||||||| ||||  |||||||||   |||||||||  |||||||||||||| |||||| ||||||| |  |||||||||||||||||    
T  6606162 cactggccaagtgttgttccccctgagaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttggtt 6606260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 671 - 725
Target Start/End: Original strand, 15643937 - 15643991
Alignment:
Q  671 cccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  15643937 cccagatacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 15643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 722
Target Start/End: Complemental strand, 3601135 - 3601034
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| ||||  ||||||||    ||||||||| |||||||  |||||| ||||||||||||||  ||||||||||||||    
T  3601135 catgcgcactggccaagcgttgttccccctgagaatcgaaaccggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagcaact 3601036  T
Q  721 tg 722  Q
    ||    
T  3601035 tg 3601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 8612033 - 8612137
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| ||||||||||| |||||||  ||| ||||||||||   |||||||||   ||||||||||||| |||||| ||||||| |||| |||| |||||    
T  8612033 catgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaact 8612132  T
Q  721 tggtt 725  Q
    |||||    
T  8612133 tggtt 8612137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 718
Target Start/End: Original strand, 9366482 - 9366579
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaa 718  Q
    |||||||||||| |||| ||| ||| |||||  |||||||| |  |||||||||| ||| ||||||||| |||||| ||| ||| |||||||||||||    
T  9366482 catgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaaggagctccttgtcactggagcccaagcaa 9366579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 12606481 - 12606377
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||  ||||||| |||| | |||||||  | |||||||||  |||||| ||||||| |||||| |||||| | |||||||||||| |    
T  12606481 catgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgttcttggaaggagctcattgccagcagagcccaagcaatt 12606382  T
Q  721 tggtt 725  Q
    |||||    
T  12606381 tggtt 12606377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 29444824 - 29444928
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| |||||| ||||||||   |||| ||||   |||||| |||||| |||||| |||||||  ||||||||| ||||    
T  29444824 catgcgcactggccaagcgttgttccccctagaaatcgaacccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaagtaact 29444923  T
Q  721 tggtt 725  Q
    |||||    
T  29444924 tggtt 29444928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 677 - 726
Target Start/End: Original strand, 19230672 - 19230721
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggttg 726  Q
    ||||||||||||| |||||| ||||||| ||||||||| |||||||||||    
T  19230672 tacgtccttggaaggagctccttgccactggagcccaaacaacttggttg 19230721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 677 - 725
Target Start/End: Complemental strand, 5759623 - 5759575
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||||||||||| ||| || ||||||| ||||||||||||||||||||    
T  5759623 tacgtccttggaaggagttccttgccactggagcccaagcaacttggtt 5759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 8932712 - 8932608
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||| | |||||||||||| |||| ||||||||||    ||||||||  |||| ||||||||| || ||| ||||||| ||||  ||| |||||    
T  8932712 catgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaact 8932613  T
Q  721 tggtt 725  Q
    |||||    
T  8932612 tggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 8944178 - 8944074
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||| | |||||||||||| |||| ||||||||||    ||||||||  |||| ||||||||| || ||| ||||||| ||||  ||| |||||    
T  8944178 catgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaact 8944079  T
Q  721 tggtt 725  Q
    |||||    
T  8944078 tggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Original strand, 10311528 - 10311632
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||| |||| ||||||| || |  | |||||||   |||||||||  |||||| ||||||| |||||| |||| || ||||||||||||||     
T  10311528 catgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggagctccttgctactggagcccaagcaaca 10311627  T
Q  721 tggtt 725  Q
    |||||    
T  10311628 tggtt 10311632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 703
Target Start/End: Original strand, 34954683 - 34954760
Alignment:
Q  626 gcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgcca 703  Q
    ||||||| |||  ||||||| ||||  ||||||||| | ||||||||||  ||||||||||||| |||||| ||||||    
T  34954683 gcactggccaaacgttgttccccctgagaatcgaacctggtattccccaggtacgtccttggaaggagctccttgcca 34954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 628 - 725
Target Start/End: Complemental strand, 9479 - 9382
Alignment:
Q  628 actggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    ||||| |||| ||||||| |||| ||||||||||   ||||||||||| |||||||||| || |||||| |||  |||||||||||||||||||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaagcaacttggtt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 720
Target Start/End: Original strand, 42891 - 42990
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  ||||  ||||||||||||||||||||||    |||||||||  ||| | |||||||  ||||| ||||||| |||| ||||||||||    
T  42891 catgcgcactgaccaagcattgttctccctaggaatcgaacccgatattccccaggtacattcttggaagtagctcgttgccactggagtccaagcaact 42990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 1e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 621 - 726
Target Start/End: Complemental strand, 620 - 515
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||| ||||| ||||||||||||| ||||  |||||||||   |||||||||   ||||||||||||| |||||| |||||||  ||||||||||||||    
T  620 catgcacactgatcaagtgttgttccccctgcgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaact 521  T
Q  721 tggttg 726  Q
    ||||||    
T  520 tggttg 515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 622 - 725
Target Start/End: Complemental strand, 319471 - 319369
Alignment:
Q  622 atgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaactt 721  Q
    ||||||||||| |||| ||||||| |||||| |||| |||   |||||||||  |||||||||||||| |||||| ||||||| |||| || ||||||||    
T  319471 atgcgcactggccaagcgttgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggag-cctagcaactt 319373  T
Q  722 ggtt 725  Q
    ||||    
T  319372 ggtt 319369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 634 - 725
Target Start/End: Original strand, 412098 - 412189
Alignment:
Q  634 caagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||| ||||||| ||||  |||||||||   |||||||||  |||||||||||||| |||||| | ||||| | ||||||||||||||||||    
T  412098 caagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaagcaacttggtt 412189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 621 - 736
Target Start/End: Original strand, 271133 - 271248
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    |||||||||||  |||| ||||||| |||| ||||||||||    ||||| ||   ||||||||||||| |||||| |||||||| ||||||||||||||    
T  271133 catgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccaccagagcccaagcaact 271232  T
Q  721 tggttgttcatattta 736  Q
    |||||||  |||||||    
T  271233 tggttgtcaatattta 271248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 677 - 725
Target Start/End: Original strand, 250128 - 250176
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggtt 725  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  250128 tacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 250176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 626 - 695
Target Start/End: Original strand, 249369 - 249438
Alignment:
Q  626 gcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagct 695  Q
    |||||||||||| ||| ||||||||  ||||||||| | ||||||||||||||||||||| ||| |||||    
T  249369 gcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagct 249438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 12623 - 12521
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||||||| |||||||  ||||||||||||||   ||||| | | | |||||||||||||  ||||| |||||||  |||||||| |||||    
T  12623 catgcgcactggtcaagcgttgttc--cctaggaatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaact 12526  T
Q  721 tggtt 725  Q
    |||||    
T  12525 tggtt 12521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 728
Target Start/End: Original strand, 8824 - 8876
Alignment:
Q  676 atacgtccttggaatgagctctttgccaccggagcccaagcaacttggttgtt 728  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||||||||||    
T  8824 atacgtccttggaaggagctccttgccactggagcccaaacaacttggttgtt 8876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 792 - 840
Target Start/End: Original strand, 5189 - 5237
Alignment:
Q  792 aatgacatttctacaactatttttaaataacttttgagacaattgtctc 840  Q
    |||||||||| |||||| ||||||||| |||||||||||||||| ||||    
T  5189 aatgacatttgtacaacaatttttaaacaacttttgagacaattttctc 5237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 724
Target Start/End: Original strand, 1673 - 1776
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaact 720  Q
    ||||||||||||  ||  ||||||| |||| | |||||||| | ||||||||||   ||||| |||||| |||||| |||||||  ||| ||||||||||    
T  1673 catgcgcactggctaatcgttgttccccctggaaatcgaacctggtattccccaggcacgtcattggaaggagctccttgccacttgagtccaagcaact 1772  T
Q  721 tggt 724  Q
    ||||    
T  1773 tggt 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 719
Target Start/End: Original strand, 95040 - 95136
Alignment:
Q  621 catgcgcactggtcaagtgttgttctccctaggaatcgaacatagtattccccaaatacgtccttggaatgagctctttgccaccggagcccaagcaac 719  Q
    ||||||||||||||||  ||||||   ||||| |||||||| | |||||||||  |||| | ||||||| |||||| ||||||  ||||||||||||||    
T  95040 catgcgcactggtcaaacgttgttt--cctagaaatcgaacctggtattccccggatactttcttggaaggagctccttgccattggagcccaagcaac 95136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 677 - 727
Target Start/End: Complemental strand, 41038 - 40988
Alignment:
Q  677 tacgtccttggaatgagctctttgccaccggagcccaagcaacttggttgt 727  Q
    ||||||| ||||| |||||| ||||||| ||||||||| ||||||||||||    
T  41038 tacgtccatggaaggagctccttgccactggagcccaaacaacttggttgt 40988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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