View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5562-Insertion-4 (Length: 664)

Name: NF5562-Insertion-4
Description: NF5562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5562-Insertion-4
NF5562-Insertion-4
[»] chr4 (10 HSPs)
chr4 (8-590)||(6310110-6310696)
chr4 (423-496)||(5902459-5902533)
chr4 (587-638)||(6310711-6310762)
chr4 (441-488)||(43028084-43028131)
chr4 (423-483)||(47806391-47806452)
chr4 (441-489)||(12728560-12728608)
chr4 (441-483)||(5627105-5627147)
chr4 (441-491)||(41476246-41476296)
chr4 (252-302)||(45761001-45761051)
chr4 (631-664)||(6311928-6311961)
[»] chr5 (16 HSPs)
chr5 (423-489)||(5856278-5856345)
chr5 (422-484)||(734612-734675)
chr5 (423-495)||(3945011-3945084)
chr5 (423-483)||(14000944-14001005)
chr5 (441-487)||(8545169-8545215)
chr5 (441-495)||(40693152-40693206)
chr5 (423-483)||(1135263-1135324)
chr5 (427-495)||(33857931-33858000)
chr5 (423-486)||(18282666-18282730)
chr5 (441-488)||(33761441-33761488)
chr5 (441-483)||(5728503-5728545)
chr5 (420-484)||(20906009-20906073)
chr5 (423-485)||(11968594-11968658)
chr5 (423-486)||(33322348-33322412)
chr5 (436-495)||(41863902-41863962)
chr5 (449-489)||(43222462-43222502)
[»] chr3 (11 HSPs)
chr3 (423-489)||(34995353-34995420)
chr3 (420-480)||(40940732-40940793)
chr3 (441-495)||(38374087-38374140)
chr3 (322-368)||(46940921-46940967)
chr3 (423-483)||(66106-66167)
chr3 (441-494)||(1148917-1148970)
chr3 (427-486)||(39199009-39199069)
chr3 (434-486)||(53995125-53995176)
chr3 (441-483)||(49819100-49819142)
chr3 (423-463)||(21594360-21594401)
chr3 (423-495)||(47410352-47410425)
[»] chr8 (9 HSPs)
chr8 (423-487)||(45537634-45537699)
chr8 (423-489)||(45521624-45521691)
chr8 (423-487)||(9007522-9007587)
chr8 (423-495)||(29773219-29773292)
chr8 (322-376)||(8540520-8540574)
chr8 (441-488)||(8137487-8137534)
chr8 (420-471)||(24314227-24314278)
chr8 (424-489)||(3513556-3513622)
chr8 (253-286)||(14545858-14545891)
[»] chr6 (1 HSPs)
chr6 (420-483)||(33007894-33007958)
[»] chr2 (11 HSPs)
chr2 (420-483)||(25637114-25637178)
chr2 (438-486)||(11090276-11090324)
chr2 (441-489)||(20155242-20155290)
chr2 (441-495)||(8785352-8785406)
chr2 (441-483)||(21526255-21526297)
chr2 (441-482)||(6786586-6786627)
chr2 (434-489)||(31126556-31126612)
chr2 (441-483)||(12541630-12541672)
chr2 (426-495)||(38502381-38502451)
chr2 (427-495)||(741128-741197)
chr2 (427-486)||(740451-740511)
[»] scaffold0265 (1 HSPs)
scaffold0265 (441-484)||(10042-10085)
[»] chr7 (5 HSPs)
chr7 (441-488)||(8721399-8721446)
chr7 (420-489)||(24862588-24862658)
chr7 (444-488)||(28069481-28069525)
chr7 (441-495)||(16840655-16840710)
chr7 (441-482)||(30248270-30248311)
[»] chr1 (8 HSPs)
chr1 (441-484)||(21822724-21822767)
chr1 (441-486)||(38190636-38190681)
chr1 (441-486)||(49840201-49840246)
chr1 (420-489)||(12174509-12174579)
chr1 (422-482)||(6732073-6732134)
chr1 (441-486)||(38190561-38190606)
chr1 (447-495)||(6160296-6160344)
chr1 (441-489)||(9848503-9848551)


Alignment Details
Target: chr4 (Bit Score: 455; Significance: 0; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 8 - 590
Target Start/End: Original strand, 6310110 - 6310696
Alignment:
Q  8 atttggaatttgcaataacaattggagtcatcatattcttgtagttctagcttcaaacattatcaccactctatgagttatatgattttgtaggagtttg 107  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6310110 atttggaatttccaataacaattggagtcatcatattcttgtagttctagcttcaaaaattatcaccactctatgagttatatgattttgtaggagtttg 6310209  T
Q  108 tgtgattctaaaacaaagttgcgtctgttagatagcttatagctataggctcgcatgtgtctatttggtaacaaattattgtgtcatgagcttataacat 207  Q
     |||||||||||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6310210 cgtgattctaaaacacagttgcctgtgttagatagcttatagctataagctcgcatgtgtctatttggtaacaa-ttattgtgtcatgagcttataacat 6310308  T
Q  208 tctttcatgagattctaacattgtttaatgtcctaaactaatcatttatatattaagaattaattacacattaataaaaagcaaacggataacaagttct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| ||| |||    
T  6310309 tctttcatgagattctaacattgtttaatgtcctaaactaatcatttatatattaaggattaattacacattaataaaaagtaagcggataataagctct 6310408  T
Q  308 gct---atgccttatgcctttttggataataaaatcaattttcgtaaacataacatttatgaacatagaaaaatacttcgaaaagtgttgaactcgaact 404  Q
    |||   ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6310409 gctgctatgtcttatacctttttggataataaaatcaattttcgtaaatataacatttatgagcatagaaaaatacttcgaaaagtgttgaactcgaact 6310508  T
Q  405 tatagtatataagacatatattatctatgcctataatttaatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta--gtataca 502  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||   ||||||    
T  6310509 tatagtgtataagacatatattatctatgcctataatttaatcaaaatcaaattaattttgataaaagtttcataaatactattgcttgtaatatataca 6310608  T
Q  503 cattaattaacacagtataaaaagcggatagactaacacgaaagactaatctaaactctattcttgataaaaatattacaatagtata 590  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  6310609 cattaattaacacaatataaaaagcggatagacaaacacgaaagactggtctaaactctattcttgataaaaatattacaatagtata 6310696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 496
Target Start/End: Original strand, 5902459 - 5902533
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgtag 496  Q
    ||||||||||   |||||||| ||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  5902459 tattatctatatttataatttcaatcaaaatcaaattaattttaatcaaaatttcataaaaactattgttcgtag 5902533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 587 - 638
Target Start/End: Original strand, 6310711 - 6310762
Alignment:
Q  587 tatattcattagttagttcaactattagttttacttaacttttaatatatat 638  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  6310711 tatattcattagttagtttaactactggttttacttaacttttaatatatat 6310762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 441 - 488
Target Start/End: Complemental strand, 43028131 - 43028084
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactatt 488  Q
    |||||||||||||||| ||||||| || ||||||||||||||||||||    
T  43028131 tttaatcaaaatcaaaataattttaatcaaaatttcataaaaactatt 43028084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 47806452 - 47806391
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||| ||| |||||||||| ||||||||||||| ||||||| || |||||||||||||||    
T  47806452 tattatttatacctataattttaatcaaaatcaaaataattttaattaaaatttcataaaaa 47806391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 489
Target Start/End: Original strand, 12728560 - 12728608
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    |||||| ||||||||||||||||| ||  ||||||||||||||||||||    
T  12728560 tttaattaaaatcaaattaattttaatcgaaatttcataaaaactattg 12728608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 483
Target Start/End: Complemental strand, 5627147 - 5627105
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||||||||||||| ||||||| || |||||||||||||||    
T  5627147 tttaatcaaaatcaaaataattttaattaaaatttcataaaaa 5627105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 491
Target Start/End: Original strand, 41476246 - 41476296
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattgct 491  Q
    |||||||||||| ||||||||||| || ||||||||||||||  |||||||    
T  41476246 tttaatcaaaattaaattaattttaatcaaaatttcataaaaggtattgct 41476296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 45761051 - 45761001
Alignment:
Q  252 tttatatattaagaattaattacacattaataaaaagcaaacggataacaa 302  Q
    ||||||||||||| ||||||||||||| ||||||||| || ||| ||||||    
T  45761051 tttatatattaaggattaattacacatgaataaaaagtaagcgggtaacaa 45761001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 631 - 664
Target Start/End: Original strand, 6311928 - 6311961
Alignment:
Q  631 atatatatgttattgttatgagcttatttcgcta 664  Q
    |||||||| |||||||||||||||||||||||||    
T  6311928 atatatatattattgttatgagcttatttcgcta 6311961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 5856345 - 5856278
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||||    
T  5856345 tattatctatacctataattttaatcaaaatcaaattaatcttgatcaaaattttataaaaactattg 5856278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 422 - 484
Target Start/End: Original strand, 734612 - 734675
Alignment:
Q  422 atattatctatgcctataa-tttaatcaaaatcaaattaattttgataaaaatttcataaaaac 484  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  734612 atattatttatacctataactttaatcaaaatcaaattaattttaatcaaaatttcataaaaac 734675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 3945084 - 3945011
Alignment:
Q  423 tattatctatgcctataattta-atcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||| || ||||||||||||||||||||| |||||    
T  3945084 tattatctatacctatcattttgatcaaaatcaaaataattttaatcaaaatttcataaaaactattgttcgta 3945011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 14001005 - 14000944
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||  |||||| |||||||    
T  14001005 tattatctatgcctataattttaatcaaaatcaaattaattttaatcgaaattttataaaaa 14000944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 487
Target Start/End: Original strand, 8545169 - 8545215
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactat 487  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||    
T  8545169 tttaattaaaatcaaattaattttaatcaaaatttcataaaaactat 8545215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 495
Target Start/End: Complemental strand, 40693206 - 40693152
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||||||||||||| ||||||| || ||||||||||||||| ||||| |||||    
T  40693206 tttaatcaaaatcaaaataattttaatcaaaatttcataaaaaatattgttcgta 40693152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 1135263 - 1135324
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||||||| | |||||||| |||| |||||||||||||||| || |||||||||||||||    
T  1135263 tattatctatacatataattttaatctaaatcaaattaattttaatcaaaatttcataaaaa 1135324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 495
Target Start/End: Original strand, 33857931 - 33858000
Alignment:
Q  427 atctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||| |||||||||| ||||||||||||| ||||||| || | ||||||||||||| ||||| |||||    
T  33857931 atctatacctataattttaatcaaaatcaaaataattttaatcataatttcataaaaattattgttcgta 33858000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 18282730 - 18282666
Alignment:
Q  423 tattatctatgcctataat-ttaatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    |||||||||| |||||||| ||||||||||| ||||||||||  || ||||||||||| ||||||    
T  18282730 tattatctatacctataatgttaatcaaaattaaattaatttaaatcaaaatttcatagaaacta 18282666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 488
Target Start/End: Original strand, 33761441 - 33761488
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactatt 488  Q
    |||||||||||||||| ||||||| || |||||||||||||| |||||    
T  33761441 tttaatcaaaatcaaaataattttaattaaaatttcataaaagctatt 33761488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 483
Target Start/End: Complemental strand, 5728545 - 5728503
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||| ||||||||||||||||| || |||||||||||||||    
T  5728545 tttaattaaaatcaaattaattttaatcaaaatttcataaaaa 5728503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 20906009 - 20906073
Alignment:
Q  420 atatattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaac 484  Q
    ||||||||||||| || ||||||| ||| |||||||||||||||||  | ||||||||||||||||    
T  20906009 atatattatctatacc-ataattttaataaaaatcaaattaattttattcaaaatttcataaaaac 20906073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 11968594 - 11968658
Alignment:
Q  423 tattatctatgcctataatttaa-tcaaaatcaaat-taattttgataaaaatttcataaaaact 485  Q
    ||||||||||  ||||||||||| ||||||| |||  ||||||| ||||||||||||||||||||    
T  11968594 tattatctatatctataatttaaatcaaaataaaaaataattttcataaaaatttcataaaaact 11968658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 33322348 - 33322412
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    ||||| |||| |||||||||| ||| |||||| |||||||| | || ||||||||||||||||||    
T  33322348 tattacctatacctataattttaattaaaatctaattaattgtaatcaaaatttcataaaaacta 33322412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 495
Target Start/End: Complemental strand, 41863962 - 41863902
Alignment:
Q  436 tataatttaa-tcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||||||| ||||||||||| |||| || || ||||||||||||||| ||||| |||||    
T  41863962 tataatttaaatcaaaatcaaaataatattaatcaaaatttcataaaaattattgttcgta 41863902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 489
Target Start/End: Original strand, 43222462 - 43222502
Alignment:
Q  449 aaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    |||||||||||||||| || ||| |||||||||||||||||    
T  43222462 aaatcaaattaattttaatcaaagtttcataaaaactattg 43222502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 34995420 - 34995353
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||    
T  34995420 tattatctatacctataattttaatcaaaatcaaattaattttaatcaaaatttcataaaagctattg 34995353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 40940732 - 40940793
Alignment:
Q  420 atatattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataa 480  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||| |||||||||| ||||    
T  40940732 atatattatctatacctataattttaatccaaatcaaattaattttaataaaaatttaataa 40940793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 495
Target Start/End: Complemental strand, 38374140 - 38374087
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||| |||||    
T  38374140 tttaatcaaaatcaaattaattttaatcaaaatttcat-aaaactattgttcgta 38374087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 46940967 - 46940921
Alignment:
Q  322 ctttttggataataaaatcaattttcgtaaacataacatttatgaac 368  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||    
T  46940967 ctttttggataacaaaatcaattttcgtaaacacaacattcatgaac 46940921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 66106 - 66167
Alignment:
Q  423 tattatctatgcctataatttaa-tcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||| ||||| |||||||||||| | ||||||||||||||||| || |||||||||||||||    
T  66106 tattctctatacctataatttaaatgaaaatcaaattaattttaatcaaaatttcataaaaa 66167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 1148917 - 1148970
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgt 494  Q
    |||||||||||||||| |||| || || ||||||||||||||||||||| ||||    
T  1148917 tttaatcaaaatcaaaataatgttaatcaaaatttcataaaaactattgttcgt 1148970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 39199069 - 39199009
Alignment:
Q  427 atctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    |||||| |||||||||| ||||||||||||| ||||||| || ||||| ||||||||||||    
T  39199069 atctatacctataattttaatcaaaatcaaaataattttaatcaaaatgtcataaaaacta 39199009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 486
Target Start/End: Complemental strand, 53995176 - 53995125
Alignment:
Q  434 cctataatttaatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    ||||||||||| ||||||||||| ||||||| || ||||||||||||||||||    
T  53995176 cctataattta-tcaaaatcaaaataattttaatcaaaatttcataaaaacta 53995125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 483
Target Start/End: Original strand, 49819100 - 49819142
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||||||||||||||||||||| || |||||||||| ||||    
T  49819100 tttaatcaaaatcaaattaattttaattaaaatttcatgaaaa 49819142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 21594401 - 21594360
Alignment:
Q  423 tattatctatgcctataa-tttaatcaaaatcaaattaattt 463  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  21594401 tattatctaggcctataactttaatcaaaatcaaattaattt 21594360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 47410425 - 47410352
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||| ||| |||||||||| ||||||||| ||| ||||||  || ||||||||||||||| ||||| |||||    
T  47410425 tattatttatacctataattttaatcaaaattaaaataatttcaatcaaaatttcataaaaattattgttcgta 47410352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 487
Target Start/End: Complemental strand, 45537699 - 45537634
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactat 487  Q
    |||||||||| |||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  45537699 tattatctatacctatatttttaatcaaaatcaaattaattttcatcaaaatttcataaaaactat 45537634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 489
Target Start/End: Original strand, 45521624 - 45521691
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    |||||||||| |||||||||| ||||||||||||| ||||||| || || ||||||||||||||||||    
T  45521624 tattatctatacctataattttaatcaaaatcaaaataattttaatcaatatttcataaaaactattg 45521691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 487
Target Start/End: Original strand, 9007522 - 9007587
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactat 487  Q
    |||||||||| |||||||||| |||||||||||||||| |||| || | |||||||||||||||||    
T  9007522 tattatctatacctataattttaatcaaaatcaaattagttttaatcagaatttcataaaaactat 9007587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 29773292 - 29773219
Alignment:
Q  423 tattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||||| || | ||||| ||||| |||||    
T  29773292 tattatctatacctataattttaatcaaaatcaaattaattttaataaaaaattgagaaaaattattgttcgta 29773219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 8540574 - 8540520
Alignment:
Q  322 ctttttggataataaaatcaattttcgtaaacataacatttatgaacatagaaaa 376  Q
    |||||||||| |||||||||||  ||||||||| |||||||||||| ||||||||    
T  8540574 ctttttggatgataaaatcaatcatcgtaaacacaacatttatgaaaatagaaaa 8540520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 488
Target Start/End: Complemental strand, 8137534 - 8137487
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactatt 488  Q
    |||||| ||||||||| ||||||| || ||||||||||||||||||||    
T  8137534 tttaataaaaatcaaaataattttaatcaaaatttcataaaaactatt 8137487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 471
Target Start/End: Original strand, 24314227 - 24314278
Alignment:
Q  420 atatattatctatgcctataatttaatcaaaatcaaattaattttgataaaa 471  Q
    ||||||||||||| ||||||||||||||||||| |||  |||||| ||||||    
T  24314227 atatattatctatacctataatttaatcaaaattaaaacaattttaataaaa 24314278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 489
Target Start/End: Original strand, 3513556 - 3513622
Alignment:
Q  424 attatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||| || |||||||||| |||| |||||    
T  3513556 attatgtatgcatataattttaatcaaaatcaaaataattttaatcaaaatttcattaaaattattg 3513622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 286
Target Start/End: Complemental strand, 14545891 - 14545858
Alignment:
Q  253 ttatatattaagaattaattacacattaataaaa 286  Q
    |||||||||||||||||||||||||| |||||||    
T  14545891 ttatatattaagaattaattacacatgaataaaa 14545858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 483
Target Start/End: Original strand, 33007894 - 33007958
Alignment:
Q  420 atatattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  33007894 atatattatctatatctataattttaatcaaaatcaaattaattttaatcaaaatttcataaaaa 33007958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 483
Target Start/End: Complemental strand, 25637178 - 25637114
Alignment:
Q  420 atatattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||| || |||||||||||||||    
T  25637178 atatattatctatacctacaattttaatcaaaatcaaattaattttaatcaaaatttcataaaaa 25637114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 11090276 - 11090324
Alignment:
Q  438 taatttaatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  11090276 taatttaatcaaaatcaaattaattttaaacaaaatttcataaaaacta 11090324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 489
Target Start/End: Complemental strand, 20155290 - 20155242
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  20155290 tttaatcaaaatcaaattaattttaatcaaaatttcataaaagctattg 20155242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 8785352 - 8785406
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||| ||||||||| ||||||| || ||||||||||||||||||||| |||||    
T  8785352 tttaatgaaaatcaaaataattttaatcaaaatttcataaaaactattgttcgta 8785406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 483
Target Start/End: Complemental strand, 21526297 - 21526255
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  21526297 tttaatcaaaatcaaattaattttaattaaaatttcataaaaa 21526255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 6786627 - 6786586
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaa 482  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  6786627 tttaatcaaaatcaaattaattttaatcaaaatttcataaaa 6786586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 489
Target Start/End: Complemental strand, 31126612 - 31126556
Alignment:
Q  434 cctataatt-taatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    ||||||||| ||||||||| |||| ||||||| || |||||||||||||||||||||    
T  31126612 cctataattgtaatcaaaaccaaaataattttaatcaaaatttcataaaaactattg 31126556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 483
Target Start/End: Original strand, 12541630 - 12541672
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaa 483  Q
    |||||||||||||||||||||||  |||| |||||||||||||    
T  12541630 tttaatcaaaatcaaattaatttcaataacaatttcataaaaa 12541672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 38502381 - 38502451
Alignment:
Q  426 tatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    ||||||| |||||||||| ||||||||||||| ||||||| || | ||||| |||||||| |||| |||||    
T  38502381 tatctatacctataattttaatcaaaatcaaaataattttaatcagaattttataaaaacaattgttcgta 38502451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 495
Target Start/End: Complemental strand, 741197 - 741128
Alignment:
Q  427 atctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||| |||||||||| ||||||||||||| ||| ||| ||  ||||||||||||||||| || |||||    
T  741197 atctatacctataattttaatcaaaatcaaaataaatttaattgaaatttcataaaaactaatgttcgta 741128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 740511 - 740451
Alignment:
Q  427 atctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    |||||| |||||||||| ||||||||||||| ||| ||| ||  |||||||||||||||||    
T  740511 atctatacctataattttaatcaaaatcaaaataaatttaatcgaaatttcataaaaacta 740451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 441 - 484
Target Start/End: Complemental strand, 10085 - 10042
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaac 484  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  10085 tttaatcaaaatcaaattaattttaatcaaaatttcataaaaac 10042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000006; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 441 - 488
Target Start/End: Complemental strand, 8721446 - 8721399
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactatt 488  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||||    
T  8721446 tttaatcaaaatcaaattaattttaattaaaatttcataaaaattatt 8721399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 489
Target Start/End: Original strand, 24862588 - 24862658
Alignment:
Q  420 atatattatctatgcctataattt-aatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    ||||||||| ||| |||||||||| |||||||||| ||| |||||| || ||||||| |||||||||||||    
T  24862588 atatattatttatacctataattttaatcaaaatcgaatcaattttaattaaaattttataaaaactattg 24862658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 488
Target Start/End: Complemental strand, 28069525 - 28069481
Alignment:
Q  444 aatcaaaatcaaattaattttgataaaaatttcataaaaactatt 488  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||    
T  28069525 aatcaaaatcaaattaattttaatgaaagtttcataaaaactatt 28069481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 16840655 - 16840710
Alignment:
Q  441 tttaatcaaaatcaaa-ttaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||| ||||||||| |||||||| || ||||||||||||||||||||| |||||    
T  16840655 tttaattaaaatcaaaattaatttttatcaaaatttcataaaaactattgttcgta 16840710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 30248270 - 30248311
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaa 482  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  30248270 tttaatcaaaatcaaaataattttaatcaaaatttcataaaa 30248311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 441 - 484
Target Start/End: Original strand, 21822724 - 21822767
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaac 484  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  21822724 tttaatcaaaatcaaattaattttaatcaaaatttcataaaaac 21822767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 486
Target Start/End: Complemental strand, 38190681 - 38190636
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||    
T  38190681 tttaaacaaaatcaaattaattttaatcaaaatttcataaaaacta 38190636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 486
Target Start/End: Original strand, 49840201 - 49840246
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    |||||||||||||||| ||||||| || ||||||||||||||||||    
T  49840201 tttaatcaaaatcaaaataattttaatcaaaatttcataaaaacta 49840246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 489
Target Start/End: Complemental strand, 12174579 - 12174509
Alignment:
Q  420 atatattatctatgcctataatttaatc-aaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    ||||||||||||| |||||| ||| | | ||||||||| ||||||| || ||||||| |||||||||||||    
T  12174579 atatattatctatacctatatttttaactaaaatcaaaataattttaatcaaaatttgataaaaactattg 12174509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 6732134 - 6732073
Alignment:
Q  422 atattatctatgcctataatttaat-caaaatcaaattaattttgataaaaatttcataaaa 482  Q
    ||||||||||| ||| |||||| || |||||||||| ||||||| || ||||||||||||||    
T  6732134 atattatctatacctctaattttattcaaaatcaaaataattttaatcaaaatttcataaaa 6732073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 486
Target Start/End: Complemental strand, 38190606 - 38190561
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaacta 486  Q
    ||||| |||||||||||||||||| || ||||||||||| ||||||    
T  38190606 tttaaacaaaatcaaattaattttaatcaaaatttcatataaacta 38190561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 495
Target Start/End: Original strand, 6160296 - 6160344
Alignment:
Q  447 caaaatcaaattaattttgataaaaatttcataaaaactattgctcgta 495  Q
    |||||||||||||||| | || |||||||||| |||||||||| |||||    
T  6160296 caaaatcaaattaattataatcaaaatttcattaaaactattgttcgta 6160344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 489
Target Start/End: Original strand, 9848503 - 9848551
Alignment:
Q  441 tttaatcaaaatcaaattaattttgataaaaatttcataaaaactattg 489  Q
    |||||||||| ||||| ||||||| || ||||||||||||||| |||||    
T  9848503 tttaatcaaattcaaaataattttaatcaaaatttcataaaaattattg 9848551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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