View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5563_low_2 (Length: 573)

Name: NF5563_low_2
Description: NF5563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5563_low_2
NF5563_low_2
[»] chr4 (55 HSPs)
chr4 (326-557)||(16993608-16993847)
chr4 (1-122)||(16993879-16994000)
chr4 (227-323)||(30982814-30982910)
chr4 (227-317)||(19482695-19482785)
chr4 (227-323)||(24613637-24613733)
chr4 (227-318)||(847978-848069)
chr4 (227-323)||(3947708-3947798)
chr4 (259-323)||(23292933-23292997)
chr4 (227-325)||(21873307-21873403)
chr4 (227-325)||(21929168-21929264)
chr4 (228-323)||(30838238-30838333)
chr4 (227-317)||(22234832-22234922)
chr4 (234-323)||(5414108-5414197)
chr4 (231-307)||(19312366-19312442)
chr4 (250-315)||(15724498-15724563)
chr4 (259-319)||(21945551-21945611)
chr4 (227-307)||(27706129-27706209)
chr4 (227-323)||(28084549-28084636)
chr4 (227-303)||(37496731-37496807)
chr4 (259-318)||(49431074-49431133)
chr4 (227-282)||(51701285-51701340)
chr4 (227-261)||(30298974-30299008)
chr4 (227-261)||(30327842-30327876)
chr4 (227-317)||(38148667-38148757)
chr4 (227-280)||(4383394-4383447)
chr4 (227-263)||(11596348-11596384)
chr4 (227-259)||(12797338-12797370)
chr4 (227-259)||(16073421-16073453)
chr4 (227-259)||(21945530-21945562)
chr4 (259-307)||(34306767-34306815)
chr4 (268-308)||(35161093-35161133)
chr4 (227-259)||(42640556-42640588)
chr4 (235-283)||(46083967-46084015)
chr4 (227-323)||(47264013-47264109)
chr4 (228-263)||(12708175-12708210)
chr4 (228-263)||(28000738-28000773)
chr4 (227-265)||(12895110-12895148)
chr4 (259-317)||(12895227-12895285)
chr4 (228-262)||(16303263-16303297)
chr4 (149-179)||(28470341-28470371)
chr4 (227-257)||(29205471-29205501)
chr4 (227-311)||(903949-904033)
chr4 (259-323)||(4157197-4157261)
chr4 (259-319)||(4157484-4157544)
chr4 (259-323)||(4672032-4672096)
chr4 (227-323)||(5225549-5225645)
chr4 (227-259)||(6879465-6879497)
chr4 (149-197)||(11110738-11110786)
chr4 (119-147)||(16993953-16993981)
chr4 (227-259)||(23292986-23293018)
chr4 (227-259)||(28964248-28964280)
chr4 (259-323)||(35157932-35157996)
chr4 (256-323)||(53381537-53381605)
chr4 (239-279)||(53490744-53490784)
chr4 (227-259)||(54580023-54580055)
[»] chr5 (43 HSPs)
chr5 (227-325)||(21542057-21542155)
chr5 (227-325)||(21522777-21522875)
chr5 (227-325)||(21533343-21533441)
chr5 (227-323)||(39698568-39698664)
chr5 (227-323)||(7677732-7677828)
chr5 (239-323)||(30183588-30183672)
chr5 (227-317)||(19579728-19579818)
chr5 (234-323)||(6401532-6401621)
chr5 (234-313)||(21814295-21814374)
chr5 (152-210)||(8419985-8420043)
chr5 (228-318)||(15382507-15382592)
chr5 (230-323)||(37328782-37328873)
chr5 (227-318)||(31084350-31084435)
chr5 (230-323)||(3966533-3966626)
chr5 (227-323)||(18592100-18592196)
chr5 (259-323)||(21191003-21191067)
chr5 (227-275)||(21351889-21351937)
chr5 (235-323)||(36642699-36642786)
chr5 (227-318)||(17088312-17088398)
chr5 (149-183)||(6770487-6770521)
chr5 (227-259)||(6247649-6247681)
chr5 (227-283)||(11685966-11686021)
chr5 (227-263)||(13287395-13287431)
chr5 (227-259)||(15884015-15884047)
chr5 (259-323)||(16304373-16304437)
chr5 (227-259)||(21191056-21191088)
chr5 (259-323)||(21576692-21576756)
chr5 (227-323)||(30098353-30098449)
chr5 (271-319)||(39205945-39205993)
chr5 (259-323)||(39268545-39268609)
chr5 (259-323)||(43564929-43564993)
chr5 (227-266)||(41633762-41633801)
chr5 (259-317)||(30098991-30099049)
chr5 (259-313)||(30502345-30502399)
chr5 (259-313)||(30542688-30542742)
chr5 (230-323)||(32766879-32766972)
chr5 (227-255)||(7218271-7218299)
chr5 (227-259)||(8420054-8420086)
chr5 (286-322)||(15884052-15884088)
chr5 (227-263)||(16374338-16374374)
chr5 (227-255)||(24906305-24906333)
chr5 (227-259)||(33178052-33178084)
chr5 (287-319)||(39342518-39342550)
[»] chr7 (43 HSPs)
chr7 (227-316)||(24339669-24339758)
chr7 (230-318)||(25822685-25822773)
chr7 (227-323)||(5409778-5409868)
chr7 (227-323)||(9778527-9778617)
chr7 (227-318)||(2334277-2334367)
chr7 (227-318)||(26033402-26033493)
chr7 (227-323)||(13770718-13770808)
chr7 (227-323)||(4794916-4795012)
chr7 (227-323)||(7438733-7438829)
chr7 (228-276)||(11272569-11272617)
chr7 (227-317)||(32093967-32094052)
chr7 (229-319)||(7058455-7058543)
chr7 (229-322)||(6630849-6630942)
chr7 (227-323)||(43027411-43027501)
chr7 (227-299)||(11665400-11665472)
chr7 (227-307)||(21560530-21560610)
chr7 (228-311)||(11831460-11831543)
chr7 (227-306)||(15902849-15902928)
chr7 (227-266)||(18039026-18039065)
chr7 (227-317)||(32308147-32308237)
chr7 (227-308)||(9408285-9408366)
chr7 (259-323)||(598256-598320)
chr7 (259-323)||(21864856-21864920)
chr7 (228-308)||(21930656-21930736)
chr7 (149-210)||(24105629-24105694)
chr7 (227-263)||(27945068-27945104)
chr7 (230-283)||(26329358-26329411)
chr7 (227-275)||(1885600-1885648)
chr7 (227-307)||(6028652-6028732)
chr7 (259-323)||(15680857-15680921)
chr7 (227-259)||(21880179-21880211)
chr7 (259-323)||(21880200-21880264)
chr7 (259-322)||(26733352-26733415)
chr7 (259-317)||(33994260-33994318)
chr7 (227-260)||(3991351-3991384)
chr7 (286-323)||(8842286-8842323)
chr7 (228-277)||(13300438-13300487)
chr7 (227-264)||(22602705-22602742)
chr7 (148-184)||(9778451-9778487)
chr7 (227-263)||(18215182-18215218)
chr7 (148-180)||(23929378-23929410)
chr7 (227-259)||(25481929-25481961)
chr7 (227-259)||(28155597-28155629)
[»] chr6 (54 HSPs)
chr6 (227-308)||(16766724-16766805)
chr6 (227-315)||(8365463-8365551)
chr6 (227-323)||(31384947-31385042)
chr6 (227-310)||(9522918-9523001)
chr6 (230-316)||(9107313-9107399)
chr6 (227-319)||(8714007-8714099)
chr6 (227-316)||(5970051-5970140)
chr6 (227-323)||(12696351-12696441)
chr6 (234-323)||(18367870-18367959)
chr6 (234-313)||(16488536-16488615)
chr6 (227-323)||(10339061-10339158)
chr6 (259-323)||(32978846-32978910)
chr6 (248-323)||(3209436-3209511)
chr6 (227-310)||(17302584-17302667)
chr6 (227-301)||(25038029-25038103)
chr6 (259-317)||(28152146-28152204)
chr6 (227-323)||(7248385-7248481)
chr6 (150-210)||(7801199-7801259)
chr6 (227-263)||(9911524-9911560)
chr6 (227-263)||(10770670-10770706)
chr6 (227-307)||(17435226-17435306)
chr6 (227-275)||(21395292-21395340)
chr6 (259-323)||(33001236-33001300)
chr6 (259-323)||(34595182-34595246)
chr6 (271-323)||(9658939-9658992)
chr6 (259-323)||(4877991-4878054)
chr6 (227-259)||(7977830-7977862)
chr6 (227-323)||(10294134-10294230)
chr6 (227-259)||(28152125-28152157)
chr6 (227-259)||(28715322-28715354)
chr6 (227-323)||(34073285-34073379)
chr6 (227-259)||(34595161-34595193)
chr6 (227-266)||(785448-785487)
chr6 (228-259)||(16388217-16388248)
chr6 (268-323)||(17327597-17327652)
chr6 (259-306)||(28715343-28715390)
chr6 (151-210)||(12696277-12696340)
chr6 (149-183)||(31384864-31384898)
chr6 (228-262)||(34197139-34197173)
chr6 (280-317)||(7625185-7625222)
chr6 (230-323)||(8776915-8777002)
chr6 (227-264)||(19369844-19369881)
chr6 (227-264)||(20576628-20576665)
chr6 (227-276)||(26562716-26562765)
chr6 (227-259)||(6898281-6898313)
chr6 (227-259)||(7801156-7801188)
chr6 (227-263)||(9025490-9025526)
chr6 (227-279)||(9195734-9195786)
chr6 (227-318)||(9629410-9629501)
chr6 (263-323)||(17841536-17841596)
chr6 (259-323)||(24645529-24645593)
chr6 (227-259)||(26402680-26402712)
chr6 (149-177)||(28715241-28715269)
chr6 (227-259)||(32978899-32978931)
[»] chr1 (60 HSPs)
chr1 (227-323)||(47989524-47989620)
chr1 (227-318)||(6612112-6612203)
chr1 (227-323)||(1486651-1486741)
chr1 (230-323)||(40917779-40917872)
chr1 (227-323)||(31694646-31694742)
chr1 (227-323)||(9828071-9828167)
chr1 (227-317)||(5944310-5944400)
chr1 (227-307)||(6427491-6427571)
chr1 (239-323)||(21032245-21032329)
chr1 (227-323)||(32461400-32461495)
chr1 (228-323)||(9629836-9629931)
chr1 (234-323)||(25934650-25934739)
chr1 (234-317)||(17778580-17778659)
chr1 (227-323)||(25361913-25362005)
chr1 (227-289)||(30173732-30173794)
chr1 (227-280)||(44482257-44482310)
chr1 (227-301)||(27471524-27471598)
chr1 (228-282)||(28273065-28273119)
chr1 (227-276)||(5376483-5376532)
chr1 (227-323)||(18556392-18556488)
chr1 (227-263)||(24577182-24577218)
chr1 (227-283)||(34371740-34371796)
chr1 (259-323)||(37598879-37598943)
chr1 (259-315)||(51410073-51410129)
chr1 (227-264)||(113326-113363)
chr1 (227-276)||(15449215-15449264)
chr1 (227-263)||(1704988-1705024)
chr1 (227-263)||(2218266-2218302)
chr1 (227-259)||(18337356-18337388)
chr1 (227-259)||(19058856-19058888)
chr1 (259-323)||(22515834-22515898)
chr1 (227-259)||(24334705-24334737)
chr1 (148-204)||(25934571-25934626)
chr1 (259-307)||(29163344-29163392)
chr1 (259-323)||(42359396-42359460)
chr1 (259-323)||(46348330-46348394)
chr1 (227-259)||(51410052-51410084)
chr1 (227-258)||(1815284-1815315)
chr1 (227-262)||(6332697-6332732)
chr1 (259-318)||(40258885-40258944)
chr1 (227-258)||(40258934-40258965)
chr1 (248-323)||(41597417-41597492)
chr1 (149-184)||(41597550-41597585)
chr1 (261-323)||(5898213-5898275)
chr1 (227-257)||(21378605-21378635)
chr1 (268-314)||(31015094-31015140)
chr1 (227-265)||(35919270-35919308)
chr1 (148-210)||(36878416-36878477)
chr1 (262-316)||(40181922-40181976)
chr1 (259-316)||(1815305-1815362)
chr1 (147-184)||(10577815-10577852)
chr1 (150-210)||(31694755-31694824)
chr1 (148-259)||(38078661-38078772)
chr1 (230-259)||(42359449-42359478)
chr1 (280-317)||(46940761-46940798)
chr1 (227-272)||(48547972-48548017)
chr1 (150-210)||(17117522-17117582)
chr1 (227-259)||(22515887-22515919)
chr1 (227-259)||(22881616-22881648)
chr1 (227-259)||(41877470-41877502)
[»] chr3 (45 HSPs)
chr3 (150-318)||(4987232-4987394)
chr3 (228-317)||(15796236-15796325)
chr3 (231-323)||(41961586-41961678)
chr3 (230-323)||(34185059-34185152)
chr3 (227-323)||(14209140-14209236)
chr3 (227-306)||(14832126-14832205)
chr3 (227-323)||(28812542-28812638)
chr3 (227-325)||(15999955-16000048)
chr3 (227-323)||(49651723-49651818)
chr3 (228-323)||(8039771-8039866)
chr3 (228-323)||(14216920-14217015)
chr3 (228-323)||(14223049-14223144)
chr3 (227-318)||(28918028-28918110)
chr3 (227-323)||(27505273-27505363)
chr3 (227-283)||(750594-750650)
chr3 (227-311)||(55212990-55213073)
chr3 (259-323)||(55401123-55401187)
chr3 (259-318)||(40993287-40993346)
chr3 (259-317)||(7171549-7171607)
chr3 (148-210)||(32400748-32400810)
chr3 (230-323)||(11665974-11666067)
chr3 (227-307)||(14829716-14829797)
chr3 (227-280)||(34910344-34910397)
chr3 (259-315)||(10955000-10955056)
chr3 (259-323)||(11252024-11252088)
chr3 (228-323)||(17005555-17005650)
chr3 (149-210)||(14747511-14747577)
chr3 (227-276)||(4990950-4990999)
chr3 (227-275)||(1509566-1509614)
chr3 (227-307)||(9800067-9800147)
chr3 (228-280)||(16789040-16789092)
chr3 (259-323)||(20503513-20503577)
chr3 (227-259)||(25775536-25775568)
chr3 (234-308)||(13806270-13806344)
chr3 (150-184)||(16000096-16000130)
chr3 (227-257)||(20503492-20503522)
chr3 (227-265)||(25948881-25948919)
chr3 (227-280)||(16192729-16192782)
chr3 (227-256)||(26508137-26508166)
chr3 (227-276)||(29386494-29386543)
chr3 (227-259)||(8587021-8587053)
chr3 (227-259)||(8593164-8593196)
chr3 (259-323)||(13845472-13845536)
chr3 (148-184)||(14027958-14027994)
chr3 (227-259)||(51206353-51206385)
[»] chr2 (47 HSPs)
chr2 (230-323)||(37419773-37419866)
chr2 (227-323)||(30717466-30717562)
chr2 (236-323)||(26769547-26769634)
chr2 (228-323)||(35056896-35056991)
chr2 (227-323)||(36756280-36756376)
chr2 (227-323)||(11223800-11223895)
chr2 (227-318)||(15657891-15657982)
chr2 (227-323)||(34784918-34785014)
chr2 (227-323)||(44860347-44860443)
chr2 (259-323)||(2438666-2438730)
chr2 (259-323)||(12224271-12224335)
chr2 (228-315)||(4882640-4882727)
chr2 (227-282)||(12668400-12668455)
chr2 (228-318)||(14996171-14996254)
chr2 (227-318)||(32749766-32749857)
chr2 (234-323)||(36096311-36096400)
chr2 (259-323)||(24009343-24009407)
chr2 (227-307)||(28524453-28524533)
chr2 (259-318)||(5040782-5040841)
chr2 (227-266)||(23058435-23058474)
chr2 (227-317)||(4207884-4207973)
chr2 (395-452)||(4527444-4527501)
chr2 (246-319)||(27084304-27084377)
chr2 (227-264)||(33153451-33153488)
chr2 (239-288)||(34337152-34337201)
chr2 (227-322)||(2331821-2331914)
chr2 (227-259)||(2438719-2438751)
chr2 (227-259)||(18421990-18422022)
chr2 (227-259)||(19536397-19536429)
chr2 (227-259)||(21624294-21624326)
chr2 (227-323)||(27286228-27286324)
chr2 (259-323)||(28596517-28596581)
chr2 (259-323)||(38117106-38117170)
chr2 (231-262)||(974778-974809)
chr2 (260-318)||(19942314-19942372)
chr2 (164-210)||(37419713-37419759)
chr2 (229-259)||(44635527-44635557)
chr2 (230-259)||(15972903-15972932)
chr2 (259-308)||(15972921-15972970)
chr2 (228-261)||(20539672-20539705)
chr2 (149-190)||(21374768-21374809)
chr2 (276-325)||(21624327-21624376)
chr2 (259-311)||(5367240-5367292)
chr2 (227-323)||(17776614-17776710)
chr2 (227-259)||(30404850-30404882)
chr2 (231-259)||(33884082-33884110)
chr2 (227-259)||(37559004-37559036)
[»] scaffold0086 (1 HSPs)
scaffold0086 (227-323)||(2955-3051)
[»] chr8 (50 HSPs)
chr8 (227-323)||(22652003-22652099)
chr8 (230-323)||(29510240-29510333)
chr8 (230-323)||(4673361-4673454)
chr8 (227-323)||(15816065-15816161)
chr8 (227-323)||(29447046-29447142)
chr8 (227-299)||(2572016-2572088)
chr8 (227-323)||(8343343-8343439)
chr8 (227-323)||(22197678-22197774)
chr8 (254-323)||(34450968-34451037)
chr8 (227-323)||(28745525-28745621)
chr8 (227-323)||(29447471-29447567)
chr8 (228-323)||(21465440-21465535)
chr8 (237-323)||(27067238-27067322)
chr8 (259-315)||(3951491-3951547)
chr8 (259-323)||(5813640-5813704)
chr8 (227-323)||(11803286-11803382)
chr8 (270-318)||(22943301-22943349)
chr8 (227-323)||(26902111-26902207)
chr8 (259-323)||(36450701-36450765)
chr8 (228-323)||(4122185-4122280)
chr8 (268-323)||(6065593-6065648)
chr8 (227-262)||(25566868-25566903)
chr8 (227-317)||(24727694-24727784)
chr8 (285-318)||(8798805-8798838)
chr8 (286-323)||(13436917-13436954)
chr8 (227-259)||(4948679-4948711)
chr8 (227-323)||(11927022-11927118)
chr8 (227-259)||(24669460-24669492)
chr8 (149-210)||(22595950-22596010)
chr8 (227-293)||(24362167-24362234)
chr8 (259-318)||(40332239-40332298)
chr8 (227-317)||(11944692-11944782)
chr8 (273-323)||(14639737-14639787)
chr8 (248-318)||(24205760-24205830)
chr8 (227-257)||(40332218-40332248)
chr8 (227-280)||(4611561-4611614)
chr8 (227-260)||(8342999-8343032)
chr8 (227-275)||(7442872-7442920)
chr8 (227-307)||(12570461-12570540)
chr8 (148-184)||(20785539-20785575)
chr8 (227-259)||(20873096-20873128)
chr8 (227-259)||(22596021-22596053)
chr8 (147-179)||(24362287-24362319)
chr8 (227-259)||(24613547-24613579)
chr8 (239-307)||(29655930-29655998)
chr8 (227-259)||(30077387-30077419)
chr8 (227-259)||(30271255-30271287)
chr8 (262-318)||(31557047-31557103)
chr8 (259-323)||(33405331-33405395)
chr8 (259-323)||(43737758-43737822)
[»] scaffold0044 (1 HSPs)
scaffold0044 (227-324)||(53207-53304)
[»] scaffold0019 (1 HSPs)
scaffold0019 (230-323)||(71755-71848)
[»] scaffold0003 (1 HSPs)
scaffold0003 (227-323)||(241621-241717)
[»] scaffold0136 (1 HSPs)
scaffold0136 (227-318)||(3790-3881)
[»] scaffold0450 (1 HSPs)
scaffold0450 (227-323)||(8571-8667)
[»] scaffold0008 (1 HSPs)
scaffold0008 (227-318)||(263313-263404)
[»] scaffold0623 (1 HSPs)
scaffold0623 (234-323)||(5932-6021)
[»] scaffold0171 (2 HSPs)
scaffold0171 (227-323)||(23538-23634)
scaffold0171 (227-265)||(23447-23485)
[»] scaffold0036 (1 HSPs)
scaffold0036 (229-323)||(9683-9777)
[»] scaffold0652 (3 HSPs)
scaffold0652 (259-323)||(409-473)
scaffold0652 (230-259)||(462-491)
scaffold0652 (151-184)||(542-575)
[»] scaffold0123 (1 HSPs)
scaffold0123 (227-323)||(44461-44557)
[»] scaffold0223 (1 HSPs)
scaffold0223 (227-266)||(20199-20238)
[»] scaffold0025 (1 HSPs)
scaffold0025 (227-262)||(23797-23832)
[»] scaffold0376 (1 HSPs)
scaffold0376 (227-305)||(6339-6417)
[»] scaffold0154 (1 HSPs)
scaffold0154 (240-318)||(13453-13531)
[»] scaffold0361 (1 HSPs)
scaffold0361 (268-317)||(14584-14633)
[»] scaffold0512 (1 HSPs)
scaffold0512 (259-323)||(4983-5047)
[»] scaffold0306 (1 HSPs)
scaffold0306 (227-323)||(13427-13518)
[»] scaffold0152 (1 HSPs)
scaffold0152 (227-323)||(21809-21900)
[»] scaffold0083 (1 HSPs)
scaffold0083 (227-259)||(45530-45562)
[»] scaffold0053 (1 HSPs)
scaffold0053 (259-307)||(8846-8894)
[»] scaffold0380 (1 HSPs)
scaffold0380 (272-323)||(8662-8713)
[»] scaffold0103 (1 HSPs)
scaffold0103 (151-210)||(51769-51827)
[»] scaffold0057 (1 HSPs)
scaffold0057 (227-323)||(24052-24148)
[»] scaffold0004 (2 HSPs)
scaffold0004 (227-258)||(123655-123686)
scaffold0004 (227-260)||(83187-83220)
[»] scaffold0050 (2 HSPs)
scaffold0050 (259-317)||(70326-70384)
scaffold0050 (227-259)||(70305-70337)
[»] scaffold0021 (1 HSPs)
scaffold0021 (227-256)||(130509-130538)
[»] scaffold0018 (1 HSPs)
scaffold0018 (227-264)||(178813-178850)
[»] scaffold0009 (2 HSPs)
scaffold0009 (260-313)||(174510-174563)
scaffold0009 (260-313)||(180023-180076)
[»] scaffold0027 (1 HSPs)
scaffold0027 (227-259)||(46709-46741)
[»] scaffold0022 (1 HSPs)
scaffold0022 (271-323)||(90903-90955)


Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 326 - 557
Target Start/End: Complemental strand, 16993847 - 16993608
Alignment:
Q  326 tgtaattatgcgtgaaactcacttgtatgtaccaataatgaacttttatgttggcttctaatttatgtgtcatagatggttggcacaaaacgatatcata 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16993847 tgtaattatgcgtgaaactcacttgtatgtaccaataatgaacttttatgttggcttctaatttatgtgtcatagatggttggcacaaaacgatctcata 16993748  T
Q  426 cttcatctttggacaactcactgattcgatcaagaaatgaatgccatggtgttattagtaacaatcccaccaaatatgaccacaggtaataatcg----- 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||         
T  16993747 cttcatctttggacaactcactgattcgatcaagaaatgaatgccatggtgttattagtaacaatccgaccaaatatgactacaggtaataatcgataaa 16993648  T
Q  521 ---atgttgtgcttggtgtctgtgttcgtaattcagaagt 557  Q
       |||||||| ||||||||||||||||||||||| ||||    
T  16993647 tgaatgttgtgtttggtgtctgtgttcgtaattcacaagt 16993608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 16994000 - 16993879
Alignment:
Q  1 gtgtgggtattgtaaactaattgattagatataaacgtcggttatacttgttagttacttagatacattagttggttgttcttcttggaagnnnnnnnng 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||        |    
T  16994000 gtgtgggtattgtaaactaattgattagatataaacgtcagttatacttgttagttacttagatacattagttggttgttcttcttggaagcaaaaaaag 16993901  T
Q  101 ttagctgttcttttggacattg 122  Q
    |||||||||||| |||||||||    
T  16993900 ttagctgttcttctggacattg 16993879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 30982910 - 30982814
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| ||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||    
T  30982910 catatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgc 30982814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 19482695 - 19482785
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||| |||||||||||||||| |||||||||||||| | |||||||||||||| ||||||| || |||| |||||||| ||||||||    
T  19482695 cataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgt 19482785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 24613733 - 24613637
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| ||||| |||||||||||||||| ||||||| || ||||||||||||| | |||||| | ||||| ||||||| ||||||||| ||||    
T  24613733 cataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgc 24613637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 847978 - 848069
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||||| | |||||||||||||||||||| ||| ||| |||||||||| ||||| |  ||||||| |||| ||||||||||||||||||    
T  847978 cataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtc 848069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 3947798 - 3947708
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||||| ||||||||      |||||||||||||||| |||||||| | |||| |||||||| ||||||||| ||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcgtg------tcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgc 3947708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 23292997 - 23292933
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||    
T  23292997 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 23292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 325
Target Start/End: Complemental strand, 21873403 - 21873307
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgcat 325  Q
    |||||||||||| |||||   ||| |||| |||||| ||||||||||  |||||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  21873403 cataattcagtgaaattat--gtgccggtatcgtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgcat 21873307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 325
Target Start/End: Complemental strand, 21929264 - 21929168
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgcat 325  Q
    |||||||||||| |||||   ||| |||| |||||| ||||||||||  |||||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  21929264 cataattcagtgaaattat--gtgccggtatcgtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgcat 21929168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 30838238 - 30838333
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||| |||||||||| |||| ||||||||||||| || |||||| ||||||||| ||||||||   |||||||||| || ||||||||| ||||    
T  30838238 ataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgc 30838333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 22234922 - 22234832
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||||||||||||  | ||||||||||||||||||| || ||||||||||||| |||||||| | ||||  ||||||| || |||||    
T  22234922 cataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgt 22234832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 323
Target Start/End: Complemental strand, 5414197 - 5414108
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| | || ||||||||||||| || |||||||||||||||| | ||||| || |||| ||| |||||||||||||| ||||    
T  5414197 cagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgc 5414108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 19312366 - 19312442
Alignment:
Q  231 attcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||||||||| |||| |||||||||||||| | ||||| |||||||||| |||||||||  ||||| ||||||    
T  19312366 attcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatc 19312442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 15724563 - 15724498
Alignment:
Q  250 gtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagt 315  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||  |||||||||||||| ||||||    
T  15724563 gtcggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagt 15724498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 21945551 - 21945611
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtct 319  Q
    |||||||| ||||||| ||||| || ||||||||| |||||||||||||| ||||||||||    
T  21945551 gtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgtct 21945611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 27706209 - 27706129
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    ||||||| |||||||||||||||||  |||||||||   | |||||||||||||||  |||| ||||| ||||||||||||    
T  27706209 cataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgataccgggacacgcctaatc 27706129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 28084549 - 28084636
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| |||||||||||||||| |||||||||||||         |||||||| ||||||| || ||||||||||||| ||||||||| ||||    
T  28084549 cataattcaatgtaattacaagtgtctgtgtcgtgtcggt---------gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgc 28084636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 37496731 - 37496807
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcct 303  Q
    ||||||||| |||||| |||||||||||||| |||||| |  |||||||||||| || | |||||||| ||||||||    
T  37496731 cataattcaatgtaatcacaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccgggacacgcct 37496807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 49431074 - 49431133
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||| |||||||||||||||| || ||||||| |||||||| |||| |||||||||    
T  49431074 gtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtc 49431133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 51701285 - 51701340
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgt 282  Q
    ||||||| |||||||||||||||||  ||||||||||||| ||| |||||||||||    
T  51701285 cataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacacgacacgt 51701340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 30298974 - 30299008
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtg 261  Q
    |||||||||||||||||||||||||||||||||||    
T  30298974 cataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 30327842 - 30327876
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtg 261  Q
    |||||||||||||||||||||||||||||||||||    
T  30327842 cataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 38148757 - 38148667
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||||||||||||  || ||||| |||||||| ||| | |||||||||||||  | ||||| |||||||||||| || ||| |||||    
T  38148757 cataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgtatctgacactggaacacgcctattcgaagaagtgt 38148667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 4383394 - 4383447
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacac 280  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||  |||||||||    
T  4383394 cataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 11596384 - 11596348
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    ||||||||||||||||||||||||| |||||||||||    
T  11596384 cataattcagtgtaattacaagtgtaggtgtcgtgtc 11596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 12797370 - 12797338
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  12797370 cataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 16073421 - 16073453
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcg 16073453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 21945530 - 21945562
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  21945530 cataattcagtgtaattacaagtgtcggtgtcg 21945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 34306815 - 34306767
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  34306815 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatc 34306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 35161093 - 35161133
Alignment:
Q  268 tcggacacgacacgtgcccgacaccggaacacgcctaatcc 308  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  35161093 tcggacacgacacgtgtccgacaccggaacacacctaatcc 35161133  T

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Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 42640556 - 42640588
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  42640556 cataattcagtgtaattacaagtgtcggtgtcg 42640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 46084015 - 46083967
Alignment:
Q  235 agtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtg 283  Q
    |||||||||| | |||||||||||||||| || ||||||||||||||||    
T  46084015 agtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtg 46083967  T

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Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 47264013 - 47264109
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||| ||||| |||| ||| ||| || || ||||||| || | |||||| | ||||||||||||| | ||| ||||||||    
T  47264013 cataattctgtgtaattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgc 47264109  T

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Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 12708175 - 12708210
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||||||||||||||||||||||| |||||||||    
T  12708175 ataattcagtgtaattacaagtgtcgatgtcgtgtc 12708210  T

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Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 28000773 - 28000738
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    ||||||||||||||||||||||||||||||| ||||    
T  28000773 ataattcagtgtaattacaagtgtcggtgtcatgtc 28000738  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 12895148 - 12895110
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcgg 265  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  12895148 cataattcaaagtaattacaagtgtcggtgtcgtgtcgg 12895110  T

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Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 12895285 - 12895227
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||| |||||||||||| ||  |||||| ||| ||||||||||||| ||||||||    
T  12895285 gtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgt 12895227  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 16303297 - 16303263
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgt 262  Q
    |||||| ||||||||||||||||||||||||||||    
T  16303297 ataatttagtgtaattacaagtgtcggtgtcgtgt 16303263  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 28470341 - 28470371
Alignment:
Q  149 ctatgaagcacggatacggatacggacaccg 179  Q
    |||||||||||||||||||||||||||||||    
T  28470341 ctatgaagcacggatacggatacggacaccg 28470371  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 29205471 - 29205501
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgt 257  Q
    |||||||||||||||||||||||||||||||    
T  29205471 cataattcagtgtaattacaagtgtcggtgt 29205501  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 903949 - 904033
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaag 311  Q
    |||||||||||||||||| | || || || |||| ||||| | |||||||||| ||| ||||||| || ||||  ||||||||||    
T  903949 cataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgtgtccgacactgggacacatctaatccaag 904033  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 4157197 - 4157261
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||| || |||||||||  | || |||||| | ||||||||||||||    
T  4157197 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgc 4157261  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 4157484 - 4157544
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtct 319  Q
    |||||||| ||||||||||||| || |||||||||  | ||||||||| | ||||||||||    
T  4157484 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtct 4157544  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 4672096 - 4672032
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||| || | |||||  |||||| |||||| | ||||||||||||||||||||||    
T  4672096 gtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgc 4672032  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 5225645 - 5225549
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| || ||| | | ||||||||||||||| ||| |||||||||| || |  | ||| |||| |||||||||||| | ||||| |||||||    
T  5225645 cataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatctatggagtatctgtgc 5225549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 6879497 - 6879465
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  6879497 cataattaagtgtaattacaagtgtcggtgtcg 6879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 11110786 - 11110738
Alignment:
Q  149 ctatgaagcacggatacggatacggacaccgaacactgacacgtcgaca 197  Q
    ||||||||||||||||| || |||||||||| |||| |||||| |||||    
T  11110786 ctatgaagcacggataccgacacggacaccggacacagacacgccgaca 11110738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 147
Target Start/End: Complemental strand, 16993981 - 16993953
Alignment:
Q  119 attgattagatataaacgtcagttatact 147  Q
    |||||||||||||||||||||||||||||    
T  16993981 attgattagatataaacgtcagttatact 16993953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 23293018 - 23292986
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||| |||||||||||||||||||||    
T  23293018 cataattcagtataattacaagtgtcggtgtcg 23292986  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 28964280 - 28964248
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||| ||||||    
T  28964280 cataattcagtgtaattacaagtgtctgtgtcg 28964248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 35157996 - 35157932
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| || |||||||||| || || |||||||||||||| |||||| || |||||| ||||    
T  35157996 gtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgc 35157932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 53381605 - 53381537
Alignment:
Q  256 gtcgtgtcggtctcggacac-gacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| |||||||| ||| |||  |||||||||| |||| |||||||| ||||||||| ||||    
T  53381605 gtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgc 53381537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 53490784 - 53490744
Alignment:
Q  239 taattacaagtgtcggtgtcgtgtcggtctcggacacgaca 279  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  53490784 taattacaagtgtcagtatcgtgtcggtgtcggacacgaca 53490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 54580055 - 54580023
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||| ||||||||||||||    
T  54580055 cataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 227 - 325
Target Start/End: Original strand, 21542057 - 21542155
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgcat 325  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||| |||| ||||||    
T  21542057 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcat 21542155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 227 - 325
Target Start/End: Original strand, 21522777 - 21522875
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgcat 325  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||| ||||||| ||||||    
T  21522777 cataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21522875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 227 - 325
Target Start/End: Original strand, 21533343 - 21533441
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgcat 325  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||| ||||||| ||||||    
T  21533343 cataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21533441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 39698568 - 39698664
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||  |||||||||  ||||||||||||| ||||||||| ||||    
T  39698568 cataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgc 39698664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 7677732 - 7677828
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||| ||||| ||||||||||||||||||||| || |||||| ||| || |||||||||| ||||||||||||| ||||| ||| ||||    
T  7677732 cataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgc 7677828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 30183588 - 30183672
Alignment:
Q  239 taattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||| ||| || ||||||||||||| ||||||| || ||||||||||| | || |||||||||||    
T  30183588 taattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgc 30183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 19579728 - 19579818
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    ||||||| |||| |||||||||||||||||||||||| || ||||||||||||  || |  ||||||| ||||||||||||| ||||||||    
T  19579728 cataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 6401532 - 6401621
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| | |||||||||||||||| || |||||||||||||||| | ||||| || | |||||| |||||||||||||| ||||    
T  6401532 cagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgc 6401621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 21814295 - 21814374
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaagga 313  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||||| | | ||| || |||||||| |||||||||    
T  21814295 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaagga 21814374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 8419985 - 8420043
Alignment:
Q  152 tgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    ||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||    
T  8419985 tgaagcacggatacggacacggacaccggacaatgacacgccgacatagctaataattt 8420043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 15382507 - 15382592
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||||| |||||||||||||||||||||     || | ||||||||||| || |||||||||| ||||||||||||| |||||||||    
T  15382507 ataattcagtataattacaagtgtcggtgtcg-----gtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 37328873 - 37328782
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||  |||  |||| ||||| | |||| |||||| ||||||||| ||||    
T  37328873 aattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacgatgcgt--ccgataccgggatacgcttaatccgaggagtgtccgtgc 37328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 31084350 - 31084435
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||||| ||||||||||||||||| |||||||      |||||||||||||||| ||||||| || ||| ||||||||| |||||||||    
T  31084350 cataattcaatgtaattacaagtgtcgatgtcgtg------tcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtc 31084435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 3966533 - 3966626
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||| | |||||||||||||||| || |||||||| ||| ||| || |||  || ||||| ||||||| ||||||||| ||||    
T  3966533 aattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgc 3966626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 18592100 - 18592196
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| |||||||| | ||| ||||||||||||||| |||||||| ||||||| | |||| ||| ||||| ||||| | | ||||||| ||||    
T  18592100 cataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgc 18592196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 21191067 - 21191003
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||| ||||||| ||||| |||| ||||||||||||| ||||||||| ||||    
T  21191067 gtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgc 21191003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 21351937 - 21351889
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacac 275  Q
    |||||||||||||||||||||||||||||||| ||||||| || |||||    
T  21351937 cataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac 21351889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 36642786 - 36642699
Alignment:
Q  235 agtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| || ||||||||||||| ||| ||| |||||||||||||||| |||||| ||| |||||||||||   ||||||||| ||||    
T  36642786 agtgtaaatataagtgtcggtgtcatgttggtgtcggacacgacacgtgtccgaca-cgggacacgcctaattggaggagtgtcggtgc 36642699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 17088312 - 17088398
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||| ||||| ||||||||||||  |||||||||||| |||| ||||     || |||||||||| ||||||||||||| |||||||||    
T  17088312 cataatttagtgtgattacaagtgtcactgtcgtgtcggtgtcggtcacg-----tgtccgacaccgggacacgcctaatccgaggagtgtc 17088398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 6770487 - 6770521
Alignment:
Q  149 ctatgaagcacggatacggatacggacaccgaaca 183  Q
    |||||||||||||||||||||||||||||||||||    
T  6770487 ctatgaagcacggatacggatacggacaccgaaca 6770521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 6247649 - 6247681
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  6247649 cataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 11685966 - 11686021
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtg 283  Q
    ||||||| |||||||||| | ||||||||||||| ||||| ||||||||||||||||    
T  11685966 cataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtg 11686021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 13287431 - 13287395
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13287431 cataattcagtgtaactacaagtgtcggtgtcgtgtc 13287395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 15884015 - 15884047
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  15884015 cataattcagtgtaattacaagtgtcggtgtcg 15884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 16304437 - 16304373
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||| || ||||||||||||||||||||||||||  ||||| ||||||| |||| |||| ||||    
T  16304437 gtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgc 16304373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 21191088 - 21191056
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  21191088 cataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 21576756 - 21576692
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||| | |||||||||||||||| | ||||| || ||||||||||||| ||||||||| ||||    
T  21576756 gtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgc 21576692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 30098353 - 30098449
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| |||||||| |  ||||||| ||| ||| || |||||||||||||||| | |||||| | |||| |||||||| |||| |||| ||||    
T  30098353 cataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgc 30098449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 39205945 - 39205993
Alignment:
Q  271 gacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtct 319  Q
    |||||||||||||||||||||||| | |||  |||||||||||||||||    
T  39205945 gacacgacacgtgcccgacaccgggatacgtttaatccaaggagtgtct 39205993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 39268609 - 39268545
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| | |||||||||| ||| ||||||| || ||||||||||||| ||||||||| ||||    
T  39268609 gtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgc 39268545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 43564929 - 43564993
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||| ||| ||||| |||| ||||||||||||| || |||||| ||||    
T  43564929 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgc 43564993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 41633762 - 41633801
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggt 266  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  41633762 cataattcagtgtaattacaaatgtcggtgtcgtatcggt 41633801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 30099049 - 30098991
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||| ||||| |||||||||| | ||||| || |||||||| |||||||||||||    
T  30099049 gtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgt 30098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 30502399 - 30502345
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaagga 313  Q
    |||||||| ||||||||||||| || ||||||| || ||| ||||||||||||||    
T  30502399 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaagga 30502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 30542742 - 30542688
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaagga 313  Q
    |||||||| ||||||||||||| || ||||||| || ||| ||||||||||||||    
T  30542742 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaagga 30542688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 32766972 - 32766879
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||| |||||||| | ||||  ||||||||||||| ||| | |||||||||| |||||||| | | ||| ||||||  ||||||||| ||||    
T  32766972 aattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgc 32766879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 7218299 - 7218271
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggt 255  Q
    |||||||||||||||||||||||||||||    
T  7218299 cataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 8420054 - 8420086
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||| |||||||||||||||||||||||    
T  8420054 cataattcaatgtaattacaagtgtcggtgtcg 8420086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 15884052 - 15884088
Alignment:
Q  286 cgacaccggaacacgcctaatccaaggagtgtctgtg 322  Q
    |||||| |||||||||||||||| |||||||||||||    
T  15884052 cgacactggaacacgcctaatccgaggagtgtctgtg 15884088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 16374374 - 16374338
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  16374374 cataaatcagtgtaattacatgtgtcggtgtcgtgtc 16374338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 24906333 - 24906305
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggt 255  Q
    |||||||||||||||||||||||||||||    
T  24906333 cataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 33178052 - 33178084
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  33178052 cataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 39342518 - 39342550
Alignment:
Q  287 gacaccggaacacgcctaatccaaggagtgtct 319  Q
    |||||||| ||||||||||||||||||||||||    
T  39342518 gacaccgggacacgcctaatccaaggagtgtct 39342550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 24339669 - 24339758
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtg 316  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||| |||||||    
T  24339669 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtg 24339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 25822685 - 25822773
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||| ||| ||| |||||||| ||||||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtc 25822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 5409868 - 5409778
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||| ||||||||||||||||||||||||||      |||||||||||| |||||||||| ||||||||||||| ||||||||| ||||    
T  5409868 cataattcagtgcaattacaagtgtcggtgtcgtgtcgg------acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 5409778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 9778527 - 9778617
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| |||||||||||||||||||||||||||      |||| ||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  9778527 cataattcagtataattacaagtgtcggtgtcgtgtcgg------acacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgc 9778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 2334277 - 2334367
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||||||||| || ||||||| | |||||| ||||||| |||||||||    
T  2334277 cataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtc 2334367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 26033493 - 26033402
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||| |||||||| |||| ||||  |||| |||||||| |||||||||    
T  26033493 cataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtc 26033402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 13770718 - 13770808
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||||||||||||| |||||||||||      |||| ||||||| |||||||||||||||||||||||| | ||||||| ||||    
T  13770718 cataattcagtgtaattacaagtgtcgttgtcgtgtcgg------acacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgc 13770808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 4794916 - 4795012
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| ||||||||||  ||| ||||| |||||||||||||||  | ||||||  |||||| |||||||||| |||||||||||    
T  4794916 cataattcagtgtaattataagtgtcggtaccgtatcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgc 4795012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 7438733 - 7438829
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||  ||||||||| ||  ||||||  | ||||||||||| ||||||||||| ||||    
T  7438733 cataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgc 7438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 11272617 - 11272569
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacg 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11272617 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 32094052 - 32093967
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacacc-ggaacacgcctaatccaaggagtgt 317  Q
    ||||||||||||||||||||| |||||||||||||      |||||||||||||||| |||||||| || ||||||||||||| ||||||||    
T  32094052 cataattcagtgtaattacaaatgtcggtgtcgtg------tcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgt 32093967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 229 - 319
Target Start/End: Original strand, 7058455 - 7058543
Alignment:
Q  229 taattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtct 319  Q
    ||||||||||||||||||||||| ||||||||||||   |||||||| |||| || ||||||  |  ||||||||||||||||||||||||    
T  7058455 taattcagtgtaattacaagtgttggtgtcgtgtcg--atcggacacaacacatgtccgacattgacacacgcctaatccaaggagtgtct 7058543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 6630942 - 6630849
Alignment:
Q  229 taattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtg 322  Q
    |||||||||||||||| | |||||| |||||||| ||| |||||||| ||||||||||||||||   |||| |||||||  |||||||| ||||    
T  6630942 taattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacaccaagacacacctaatctgaggagtgtgtgtg 6630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 43027501 - 43027411
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||| |||||||| ||||||||||||||||||||| |      |||||||||||| |||||||||| ||||||||||||| | ||||||| ||||    
T  43027501 cataatgcagtgtaaatacaagtgtcggtgtcgtgtcag------acacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgc 43027411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 11665472 - 11665400
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacac 299  Q
    ||||||||||| |||||| |||||||| |||| ||||||| ||| |||||||||||| ||||||||| |||||    
T  11665472 cataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacac 11665400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 21560530 - 21560610
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||||||||||||||||||||||||||||| ||||| ||  |||||| || || |  |||||| |||||||||||||    
T  21560530 cataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgtctaacaccgaaacacgcctaatc 21560610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 11831460 - 11831543
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaag 311  Q
    |||||| ||||||||||||||| |  ||||||| ||||| |||||||||||| |||   ||||||||| |||||||||||||||    
T  11831460 ataatttagtgtaattacaagtattcgtgtcgtatcggtgtcggacacgacatgtgtttgacaccggagcacgcctaatccaag 11831543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 15902849 - 15902928
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaat 306  Q
    ||||||| |||||||||| | |||||||||| |||||||| ||||||||||||| ||||||| ||| | |||||| ||||    
T  15902849 cataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacatgcccgagaccaggacacgcttaat 15902928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 18039026 - 18039065
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggt 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18039026 cataattcagtgtaattacaagtgtcggtgtcgtgtcggt 18039065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 32308147 - 32308237
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||||||||||||  | ||||| ||||||||||||| | ||||||||||| || |||||||||  ||||  ||||||| ||||||||    
T  32308147 cataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgt 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 9408366 - 9408285
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatcc 308  Q
    ||||||| |||||||||||||||||||||||||| ||||| || ||||||| |  |  ||||||||  ||||||||||||||    
T  9408366 cataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgatatatatccgacaccaaaacacgcctaatcc 9408285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 598256 - 598320
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| || ||||||||||||| |||||||||| ||||||||||||| || |||||| ||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgc 598320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 21864856 - 21864920
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||| | |||||||||||||||| |||||||||| ||||| ||||| | ||||||||||||||    
T  21864856 gtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgc 21864920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 21930656 - 21930736
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatcc 308  Q
    |||||||| | ||||||||||||||| ||||||||| || | |||||| | ||||| ||||| ||||||||| ||||||||    
T  21930656 ataattcattttaattacaagtgtcgatgtcgtgtcagtgttggacacaagacgtgtccgacgccggaacacacctaatcc 21930736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 24105629 - 24105694
Alignment:
Q  149 ctatgaagcacggatacggatacggacac----cgaacactgacacgtcgacatagctaataattt 210  Q
    |||||||||||||||||||||||||||||    || ||||||||||| ||||| ||||||||||||    
T  24105629 ctatgaagcacggatacggatacggacacgacacggacactgacacgccgacacagctaataattt 24105694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 27945068 - 27945104
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||||||||||||||||||||||||||||||||||    
T  27945068 cataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 26329411 - 26329358
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtg 283  Q
    ||||||||||||||| | ||||||| ||||||||||| || |||||||||||||    
T  26329411 aattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtg 26329358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 1885600 - 1885648
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacac 275  Q
    ||||||||| |||||| ||||||||||||||||||| ||| ||||||||    
T  1885600 cataattcaatgtaatcacaagtgtcggtgtcgtgttggtgtcggacac 1885648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 6028652 - 6028732
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    ||||||| | ||||||||||| ||||||||||||||| || ||| |||||||||| |  |||||| |  ||||||||||||    
T  6028652 cataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 15680857 - 15680921
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| |||||||||  ||||| ||||| | ||||||||| ||||    
T  15680857 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgc 15680921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 21880179 - 21880211
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  21880179 cataattcagtgtaattacaagtgtcggtgtcg 21880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 21880200 - 21880264
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||| || |||||||| | ||||||||||||| || |||||| ||||    
T  21880200 gtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgc 21880264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 26733352 - 26733415
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtg 322  Q
    |||||||| ||||||||||| | || |||| || |||||||||||||||| ||| |||||||||    
T  26733352 gtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtctgtg 26733415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 33994260 - 33994318
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||| || |||||||||| || || ||||||  ||||||||||||||||||||||    
T  33994260 gtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgt 33994318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 3991351 - 3991384
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgt 260  Q
    ||||||||||| ||||||||||||||||||||||    
T  3991351 cataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 8842323 - 8842286
Alignment:
Q  286 cgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgc 8842286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 13300438 - 13300487
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacga 277  Q
    |||||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  13300438 ataattcagtgtaattaccagtctcggtgtcatgtcggtgtcgaacacga 13300487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 22602742 - 22602705
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcg 264  Q
    |||||||||||||||||| | |||||||||||||||||    
T  22602742 cataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 9778451 - 9778487
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccgaacac 184  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  9778451 gctatgaagcacggatacggacacggacaccggacac 9778487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 18215218 - 18215182
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  18215218 cataatgcagtgtagttacaagtgtcggtgtcgtgtc 18215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 23929410 - 23929378
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccga 180  Q
    |||||| ||||||||||||||||||||||||||    
T  23929410 gctatgtagcacggatacggatacggacaccga 23929378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 25481929 - 25481961
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||||||||| |||||||    
T  25481929 cataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 28155597 - 28155629
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||| ||||||||||||||||||||||||    
T  28155597 cataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 7e-29; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 16766724 - 16766805
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatcc 308  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||||    
T  16766724 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatcc 16766805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 8365551 - 8365463
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagt 315  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || ||||||||||||| ||||||    
T  8365551 cataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 8365463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 31384947 - 31385042
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||||| ||||||||| | | | |||||||||||||| || ||||||| ||||||||||||||||||||||| ||||    
T  31384947 cataattcagtgtaattacaagtgtcagtgtcgtgtag-tgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgc 31385042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 9522918 - 9523001
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaa 310  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||| |||||||||  |||||||||||||||    
T  9522918 cataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 316
Target Start/End: Complemental strand, 9107399 - 9107313
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtg 316  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||  ||| |||||||||| |||| |||||||| |||||||    
T  9107399 aattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtg 9107313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 8714007 - 8714099
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtct 319  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |  |||||| ||| ||||||| ||||| ||||||||||    
T  8714007 cataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtct 8714099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 316
Target Start/End: Complemental strand, 5970140 - 5970051
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtg 316  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |  |||||| ||| ||||||| ||||| |||||||    
T  5970140 cataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtg 5970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 12696351 - 12696441
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||||| ||||||||||||      |||||||||||| | |||||||| |||| ||| |||||||||||||||||||    
T  12696351 cataattcagtgtaattacaagtgtcagtgtcgtgtcgg------acacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgc 12696441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 18367870 - 18367959
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| | ||||||||||||||||||| || |||||||||| || | ||||| || |||||||| |||||||||||||| ||||    
T  18367870 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgc 18367959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 16488615 - 16488536
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaagga 313  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||||| | | ||| || |||||||| |||||||||    
T  16488615 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaagga 16488536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 10339158 - 10339061
Alignment:
Q  227 cataattcagtgt-aattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||| ||||| | ||||| ||| ||||||||| ||||||||||||| || ||||||| || ||||||||||||  ||||||||| ||||    
T  10339158 cataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgc 10339061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 32978910 - 32978846
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||| || |||||||||| ||||| ||||||||||||||||| ||||    
T  32978910 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgc 32978846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 3209436 - 3209511
Alignment:
Q  248 gtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||| || ||| |||||||||| | |||||||| | ||||||||||||| |||||||| |||||    
T  3209436 gtgtcggtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgc 3209511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 17302584 - 17302667
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaa 310  Q
    ||||||||| ||||||||||||||||  ||||||||| || |  ||||| ||||||| |||||| |||||||| ||||||||||    
T  17302584 cataattcaatgtaattacaagtgtcattgtcgtgtcagtattagacacaacacgtgtccgacatcggaacacacctaatccaa 17302667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 25038103 - 25038029
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgc 301  Q
    ||||||| ||||||||||||| ||||||| | |||| ||| || ||||||||||||| |||||||| ||||||||    
T  25038103 cataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccagaacacgc 25038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 28152146 - 28152204
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||| |||||||||||||||| |||||||||| ||| ||||||||| ||||||||    
T  28152146 gtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgt 28152204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 7248385 - 7248481
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||| ||||||| | |||| || ||||||||||| | |||||| ||| ||| |||||||||| ||||| | ||||| ||||||||| ||||    
T  7248385 cataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgc 7248481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 7801259 - 7801199
Alignment:
Q  150 tatgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    ||||||||||||||||||| ||||| |||||||||| ||||| ||||| | ||||||||||    
T  7801259 tatgaagcacggatacggacacggataccgaacactaacacgccgacacaactaataattt 7801199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 9911560 - 9911524
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||||||||||||||||||||||||||||||||||    
T  9911560 cataattcagtgtaattacaagtgtcggtgtcgtgtc 9911524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 10770706 - 10770670
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||||||||||||||||||||||||||||||||||    
T  10770706 cataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 17435226 - 17435306
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||||||||||||  |||||| || ||||| ||||||    
T  17435226 cataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatc 17435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 21395340 - 21395292
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacac 275  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  21395340 cataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 33001300 - 33001236
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| | ||||||| || ||||||||||||| |||||| |||||    
T  33001300 gtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgc 33001236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 34595182 - 34595246
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| | |||||||| |||| |||||||| ||||||||| ||||    
T  34595182 gtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgc 34595246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 9658939 - 9658992
Alignment:
Q  271 gacacgacacgtgcccgacaccggaacacgcctaa-tccaaggagtgtctgtgc 323  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||    
T  9658939 gacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgc 9658992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 4877991 - 4878054
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||| || ||||||| || ||||||||||||| ||||||||| ||||    
T  4877991 gtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgc 4878054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 7977862 - 7977830
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  7977862 cataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 10294134 - 10294230
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| |||| |||||||| | ||||||||||||||| ||| |||||||||||| ||| |||| ||  | ||||  ||||||  ||||||||||||||    
T  10294134 catatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgc 10294230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 28152125 - 28152157
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  28152125 cataattcagtgtaattacaagtgtcggtgtcg 28152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 28715322 - 28715354
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  28715322 cataattcagtgtaattacaagtgtcggtgtcg 28715354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 34073379 - 34073285
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| | | ||||||||||||||||| ||  |||||||| ||| |||||||||| ||||  ||||| | ||||||||| ||||    
T  34073379 cataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc-tacacgacatgtg-ccgacaccgggacacctctaattcgaggagtgtccgtgc 34073285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 34595161 - 34595193
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  34595161 cataattcagtgtaattacaagtgtcggtgtcg 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 785487 - 785448
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggt 266  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  785487 cataattcaatgtaatcacaagtgtcggtgtcgtgtcggt 785448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 259
Target Start/End: Complemental strand, 16388248 - 16388217
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcg 16388217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 17327652 - 17327597
Alignment:
Q  268 tcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||| | ||||| || ||||||||||||| ||||||||| ||||    
T  17327652 tcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgc 17327597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 28715343 - 28715390
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaat 306  Q
    |||||||| ||||||||||||||||  ||||||||| |||||||||||    
T  28715343 gtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaat 28715390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 12696277 - 12696340
Alignment:
Q  151 atgaagcacggatacggatacggacac----cgaacactgacacgtcgacatagctaataattt 210  Q
    |||||||||||||||||| ||||||||    || ||||||||||| ||||| ||||||||||||    
T  12696277 atgaagcacggatacggacacggacacgacacggacactgacacgccgacacagctaataattt 12696340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 31384864 - 31384898
Alignment:
Q  149 ctatgaagcacggatacggatacggacaccgaaca 183  Q
    |||||||||||| ||||||||||||||||||||||    
T  31384864 ctatgaagcacgaatacggatacggacaccgaaca 31384898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 34197139 - 34197173
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgt 262  Q
    ||||||||||||||||| |||||||||||||||||    
T  34197139 ataattcagtgtaattataagtgtcggtgtcgtgt 34197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 7625185 - 7625222
Alignment:
Q  280 cgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  7625185 cgtgtccgacaccggaacacgcttaatccaaggagtgt 7625222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 8777002 - 8776915
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||| |||||||     | | || |||||||||||| |||||||||  |||| |||||||| ||||||||| ||||    
T  8777002 aattcagtgtaattacaagtgttggtgtcg-----gacacg-acacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgc 8776915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 19369844 - 19369881
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcg 264  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  19369844 cataattcaatgtaatcacaagtgtcggtgtcgtgtcg 19369881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 20576665 - 20576628
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcg 264  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  20576665 cataattcagtgtaattataagtgttggtgtcgtgtcg 20576628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 26562716 - 26562765
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacg 276  Q
    |||||||||||||||||| | |||||| |||||||||||| ||| |||||    
T  26562716 cataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacg 26562765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 6898313 - 6898281
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  6898313 cataattaagtgtaattacaagtgtcggtgtcg 6898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 7801188 - 7801156
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||| ||||||||||||||||||||||    
T  7801188 cataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 9025526 - 9025490
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||||||||||||||| | ||||||||||||||||    
T  9025526 cataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9195786 - 9195734
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgaca 279  Q
    ||||||| |||||||||| | ||||||||||||||| ||| || |||||||||    
T  9195786 cataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacgaca 9195734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 9629410 - 9629501
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtc-gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||||| |||||||| | ||||||||||| ||||| || |||||||| ||| ||| ||||||| |  ||||| ||||||| |||||||||    
T  9629410 cataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtc 9629501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 17841596 - 17841536
Alignment:
Q  263 cggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| |||||||||||| ||| ||||||| |  ||||||||||||| ||||||||| ||||    
T  17841596 cggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgc 17841536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 24645529 - 24645593
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| || ||||||||||||| ||||||||   ||||| ||||||| | ||||||||||||    
T  24645529 gtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgc 24645593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 26402712 - 26402680
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||| ||||||||||||||||    
T  26402712 cataattcagtgtaatcacaagtgtcggtgtcg 26402680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 177
Target Start/End: Original strand, 28715241 - 28715269
Alignment:
Q  149 ctatgaagcacggatacggatacggacac 177  Q
    |||||||||||||||||||||||||||||    
T  28715241 ctatgaagcacggatacggatacggacac 28715269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 32978931 - 32978899
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  32978931 cataattaagtgtaattacaagtgtcggtgtcg 32978899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 47989524 - 47989620
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||| ||| ||||||||||||| ||||||||| ||||    
T  47989524 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgc 47989620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 6612203 - 6612112
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| | ||| |||||||| | |||||||||||||||||||||||    
T  6612203 cataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 1486741 - 1486651
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| ||||||||||||||||||||      |||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  1486741 cataattcagtgtaattataagtgtcggtgtcgtgtcgg------acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgc 1486651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 40917779 - 40917872
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| ||||||||||||||| |||||||||||||||| | |||||||||||||| |||||||||| ||||||||||||| |||| |||| ||||    
T  40917779 aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgc 40917872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 31694742 - 31694646
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| |||| |   ||||||||||||||||||||||  ||||||||| ||||    
T  31694742 cataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgc 31694646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 9828071 - 9828167
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||  | |||||||||||||||| || || ||||||||||||| |||||||||| ||||| ||||||| ||||||||| ||||    
T  9828071 cataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 9828167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 5944310 - 5944400
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||||||||||||| ||||||||||||||||||| |  ||||||| |||| || |||||||||| | ||||||||||| ||||||||    
T  5944310 cataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgt 5944400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 6427491 - 6427571
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    ||||||||| ||||| |||||||||| ||||||||| ||  |||||||||||||||| |||||||||| ||||||||||||    
T  6427491 cataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatc 6427571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 21032245 - 21032329
Alignment:
Q  239 taattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| |||||||||||||| ||| |||||||||||| ||| |||||| ||  | ||||||||||||||||||||||||||    
T  21032245 taattacaaatgtcggtgtcgtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgc 21032329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 32461495 - 32461400
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| | ||||||||||||||| ||||| |||||||| |||||||||||||||| | ||||| || |||||||||||||||| |||||| ||||    
T  32461495 cataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgc 32461400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 9629931 - 9629836
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||| |||| ||||||||||||||||||| | ||||||||||||| || |||||||||| ||||| ||  |||||| |||||| ||||    
T  9629931 ataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgc 9629836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 25934650 - 25934739
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| | |||||||| |||||||||| |||||||||||||||| | ||||| || | |||||| |||||||||||||| ||||    
T  25934650 cagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgc 25934739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 17778580 - 17778659
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||||| |||||||||| ||| ||||||||| || |||||    
T  17778580 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacgtgtccgacaccgggacatgcctaatccgagaagtgt 17778659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 25361913 - 25362005
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| | ||||| ||||||||||||| ||||||||||||  || ||||||||||||||  |||||||| | ||||||| ||||    
T  25361913 cataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca--tgtccgacaccggaaca--cctaatccgaagagtgtccgtgc 25362005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 30173794 - 30173732
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgac 289  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||| || |||||    
T  30173794 cataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgac 30173732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 44482257 - 44482310
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacac 280  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  44482257 cataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 27471598 - 27471524
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgc 301  Q
    |||||||||||||||||||| |||| |||||| | ||||| | ||| |||||||||| |||||||||| ||||||    
T  27471598 cataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgtccgacaccgggacacgc 27471524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 28273119 - 28273065
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgt 282  Q
    ||||||||||||||||||||||||||||||| | ||| | |||||||||||||||    
T  28273119 ataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacacgacacgt 28273065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 5376532 - 5376483
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacg 276  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  5376532 cataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 18556488 - 18556392
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| | ||||||||||||| | ||||||||| |||| || ||| ||||||||  ||||||| || ||||||||||||| || |||||| ||||    
T  18556488 cataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgc 18556392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 24577218 - 24577182
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||||||||||||||||||||||||||||||||||    
T  24577218 cataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 34371740 - 34371796
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtg 283  Q
    |||||||||||||||||| | ||||||||||||||| ||| ||||| ||||||||||    
T  34371740 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtg 34371796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 37598879 - 37598943
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| ||||||  || ||||||||||||| ||||||||| ||||    
T  37598879 gtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgc 37598943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 51410073 - 51410129
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagt 315  Q
    |||||||| |||||||||||||||  |||||||||  ||||||||||||||||||||    
T  51410073 gtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagt 51410129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 113326 - 113363
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcg 264  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  113326 cataattcagtgtaattacaagtgtaggtgtcgtgtcg 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 15449264 - 15449215
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacg 276  Q
    ||||||| |||||||||||||||||| ||||||| ||||| |||||||||    
T  15449264 cataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacacg 15449215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 1705024 - 1704988
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1705024 cataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 2218266 - 2218302
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtc 263  Q
    ||||||| |||||||||||||||||||||||||||||    
T  2218266 cataatttagtgtaattacaagtgtcggtgtcgtgtc 2218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 18337356 - 18337388
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  18337356 cataattcagtgtaattacaagtgtcggtgtcg 18337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 19058888 - 19058856
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  19058888 cataattcagtgtaattacaagtgtcggtgtcg 19058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 22515898 - 22515834
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||| |  |||||||||  ||||||||||||| ||||||||| ||||    
T  22515898 gtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgc 22515834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 24334737 - 24334705
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcg 24334705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 25934571 - 25934626
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaa 204  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||| ||||| ||||||    
T  25934571 gctatgaagcacggatacggacacggacaccggaca-tgacacgccgacacagctaa 25934626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 29163392 - 29163344
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||| |||||||||||||||||| |||||||| ||||| ||||||    
T  29163392 gtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatc 29163344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 42359460 - 42359396
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||| |||  ||| |||||||||| ||||||||||||| ||||||||| ||||    
T  42359460 gtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 42359396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 46348394 - 46348330
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| |||||||||  |||||||| |||| ||| ||||| ||||    
T  46348394 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgc 46348330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 51410052 - 51410084
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  51410052 cataattcagtgtaattacaagtgtcggtgtcg 51410084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 258
Target Start/End: Original strand, 1815284 - 1815315
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtc 258  Q
    ||||||||||||||||||||||||||||||||    
T  1815284 cataattcagtgtaattacaagtgtcggtgtc 1815315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 6332697 - 6332732
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgt 262  Q
    ||||||||||||||||||||||| ||||||||||||    
T  6332697 cataattcagtgtaattacaagtatcggtgtcgtgt 6332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 40258944 - 40258885
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||| || |||||||||| || |||||||| | ||||||||||||| |||||||||    
T  40258944 gtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtc 40258885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 258
Target Start/End: Complemental strand, 40258965 - 40258934
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtc 258  Q
    ||||||||||||||||||||||||||||||||    
T  40258965 cataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 41597492 - 41597417
Alignment:
Q  248 gtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| ||||| ||||| || |||||||||||||||| | ||||| || | |||| | |||||||||||||||||||    
T  41597492 gtgttggtgttgtgtccgtgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgc 41597417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 41597585 - 41597550
Alignment:
Q  149 ctatgaagcacggatacggatacggacaccgaacac 184  Q
    |||||||||||||||||||||||||||||| |||||    
T  41597585 ctatgaagcacggatacggatacggacaccaaacac 41597550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 5898275 - 5898213
Alignment:
Q  261 gtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||| || ||||||||||||| || ||||||| ||||| ||||||| ||||||||| ||||    
T  5898275 gtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgc 5898213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 21378605 - 21378635
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgt 257  Q
    |||||||||||||||||||||||||||||||    
T  21378605 cataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 31015094 - 31015140
Alignment:
Q  268 tcggacacgacacgtgcccgacaccggaacacgcctaatccaaggag 314  Q
    |||||||||||||||| | |||| ||| |||||||||||||||||||    
T  31015094 tcggacacgacacgtgtctgacatcgggacacgcctaatccaaggag 31015140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 35919308 - 35919270
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcgg 265  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  35919308 cataattcagtgtaattataagtgtccgtgtcgtgtcgg 35919270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 36878416 - 36878477
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    ||||||||||||||||||||| |||||||  | ||||||||||| |||||  |||||||||||    
T  36878416 gctatgaagcacggatacggacacggacatag-acactgacacgccgacaccgctaataattt 36878477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 40181922 - 40181976
Alignment:
Q  262 tcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtg 316  Q
    ||||| |||||||| ||||||| || ||||||| ||||||||||||| |||||||    
T  40181922 tcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 1815305 - 1815362
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtg 316  Q
    |||||||| || |||||||||| || |||||||||| ||||||||||||  |||||||    
T  1815305 gtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtg 1815362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 10577852 - 10577815
Alignment:
Q  147 tgctatgaagcacggatacggatacggacaccgaacac 184  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  10577852 tgctatgaagcacggatacggacacggacaccggacac 10577815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 31694824 - 31694755
Alignment:
Q  150 tatgaagcacggatacggatacggacaccg---------aacactgacacgtcgacatagctaataattt 210  Q
    ||||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||    
T  31694824 tatgaagcacggatacggatacggacaccggacacgacagacactgatacgtcgacatagctaataattt 31694755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 38078772 - 38078661
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccg------aacactgacacgtcgacatagctaataatttnnnnnnnnnnnnnnnncataattcagtgtaa 241  Q
    ||||||||||||||||||||| ||||||||||      |||||||||||||||||| ||||||||||||                ||||||||| |||||    
T  38078772 gctatgaagcacggatacggacacggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatca------cataattcaatgtaa 38078679  T
Q  242 ttacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||    
T  38078678 ttacaagtgtcggtgtcg 38078661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 259
Target Start/End: Complemental strand, 42359478 - 42359449
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||||||||||||||    
T  42359478 aattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 46940798 - 46940761
Alignment:
Q  280 cgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  46940798 cgtgtccgacaccggaacacgcctaatccgaggagtgt 46940761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 48548017 - 48547972
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcgga 272  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||    
T  48548017 cataattcaatgtaattacaagtattggtgtcgtgtcggtgtcgga 48547972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 17117582 - 17117522
Alignment:
Q  150 tatgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    |||||||||||||||| || || |||||||||||||||| |  ||||||  ||||||||||    
T  17117582 tatgaagcacggatacagacacagacaccgaacactgactctccgacatcactaataattt 17117522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 22515919 - 22515887
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  22515919 cataatttagtgtaattacaagtgtcggtgtcg 22515887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 22881648 - 22881616
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  22881648 cataatttagtgtaattacaagtgtcggtgtcg 22881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 41877502 - 41877470
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  41877502 cataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 150 - 318
Target Start/End: Complemental strand, 4987394 - 4987232
Alignment:
Q  150 tatgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaataatttnnnnnnnnnnnnnnnncataattcagtgtaattacaagt 249  Q
    |||||||||||||||||||||| |||   ||||||||||||| ||||| ||||||||||||                |||||||||||||||||||||||    
T  4987394 tatgaagcacggatacggatacagacctagaacactgacacgccgacacagctaataattt------gaaaaaatcacataattcagtgtaattacaagt 4987301  T
Q  250 gtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    || |||| ||||||||| | |||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  4987300 gttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 4987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 15796325 - 15796236
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||| || ||||||||||||||||||||||| ||||||    
T  15796325 ataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgt 15796236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 41961678 - 41961586
Alignment:
Q  231 attcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || ||||||||||||| || |||||| ||||    
T  41961678 attcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgc 41961586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 34185152 - 34185059
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||||||||||||||||||||  | ||||||| |||| ||| |||||||||| ||||||||||||| ||||||||| ||||    
T  34185152 aattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 34185059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 14209140 - 14209236
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||||| ||| | || ||||||||||| |||||| ||||    
T  14209140 cataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgc 14209236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 14832126 - 14832205
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaat 306  Q
    ||||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  14832126 cataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 28812542 - 28812638
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||| ||||||||||||||||||||| ||| || ||||||| || || |||||| | | ||||||||||||| ||||||||||||||    
T  28812542 cataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgc 28812638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 227 - 325
Target Start/End: Complemental strand, 16000048 - 15999955
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgcat 325  Q
    ||||||||||||||| |||||||||||||||||     | | || |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  16000048 cataattcagtgtaactacaagtgtcggtgtcg-----gacacgtacacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcat 15999955  T

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Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 49651818 - 49651723
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||| |  |||||||||| |||| |||||||| || |||||| ||||    
T  49651818 cataattcactgtaattacaagtgtcggtgtcgtgtcggac-cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgc 49651723  T

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Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 8039866 - 8039771
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||| || || || |||||||||| |||||| |||||| | |||| |||||||    
T  8039866 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgc 8039771  T

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Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 14216920 - 14217015
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||  |||||| || |||| |||||||| || |||||| ||||    
T  14216920 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgc 14217015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 14223049 - 14223144
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||  |||||| || |||| |||||||| || |||||| ||||    
T  14223049 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgc 14223144  T

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Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 28918028 - 28918110
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||| || |||||||||||||||||||||||    
T  28918028 cataattcagtgtaattacaagtgtcggtgtcgtg---------gacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtc 28918110  T

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Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 27505273 - 27505363
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||||||||||||||||||||      || ||||||||||||| |||||||||| ||| ||||||||| ||||||||| ||||    
T  27505273 cataattaagtgtaattacaagtgtcggtgtcgtg------tctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgc 27505363  T

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Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 750650 - 750594
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtg 283  Q
    ||||||||  || ||||||||||||||||||||||||||| ||||||||||||||||    
T  750650 cataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtg 750594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 55212990 - 55213073
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaag 311  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||| ||| ||||||| |||||||||  |||||| |||||||||    
T  55212990 cataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaag 55213073  T

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Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 55401123 - 55401187
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| |||||||||  ||||||||||||| ||||||||| ||||    
T  55401123 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgc 55401187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 40993346 - 40993287
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||| ||||||||||||| || |||||||||| ||||||||||||| |||||||||    
T  40993346 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 40993287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 7171549 - 7171607
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||| ||| |||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  7171549 gtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 32400810 - 32400748
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    ||||||||||| ||||||||| ||| |||||| ||||||||||| ||||| ||||||||||||    
T  32400810 gctatgaagcatggatacggacacgaacaccggacactgacacggcgacacagctaataattt 32400748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 11665974 - 11666067
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| |||||||||| | ||||||||||||||| | | |  ||||||||||||| | || | ||||||||||||||| ||||||||||| ||||    
T  11665974 aatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtccgtgc 11666067  T

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Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 14829716 - 14829797
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgt-gcccgacaccggaacacgcctaatc 307  Q
    |||||||||  ||||||||||||||||||||||||||||| | |||||||| | || |  ||||||||| ||||||||||||    
T  14829716 cataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgagatgtggttcgacaccgggacacgcctaatc 14829797  T

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Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 34910344 - 34910397
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacac 280  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||    
T  34910344 cataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacac 34910397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 10955000 - 10955056
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagt 315  Q
    |||||||| |||||||||||||||| ||||||| || ||||||||||||| ||||||    
T  10955000 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 11252024 - 11252088
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| || ||||| ||||||| ||| || ||||||||||||||||| ||||||||||||||    
T  11252024 gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgc 11252088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 17005650 - 17005555
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||| |||||||||||| |||| ||| || ||||  ||||||| | |||||| | ||||  ||||||| |||||||| |||||    
T  17005650 ataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaatccgaggagtgtttgtgc 17005555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 14747511 - 14747577
Alignment:
Q  149 ctatgaagcacggatacggatacggacaccg-----aacactgacacgtcgacatagctaataattt 210  Q
    |||||||||||||||||||||||||||||||      ||||||||||| ||||| ||||||||||||    
T  14747511 ctatgaagcacggatacggatacggacaccggacacgacactgacacgccgacacagctaataattt 14747577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 4990999 - 4990950
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacg 276  Q
    |||||||||||||||||||||||||||| ||||||| ||| || ||||||    
T  4990999 cataattcagtgtaattacaagtgtcggcgtcgtgttggtatcagacacg 4990950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 1509566 - 1509614
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacac 275  Q
    ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  1509566 cataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac 1509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 9800067 - 9800147
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||| ||||||||  ||||||||||||||||||||| || || | || ||||| | |||||| | ||||||||||||    
T  9800067 cataattccgtgtaattgtaagtgtcggtgtcgtgtcggtatcagagatgatacgtgtcggacacctggacacgcctaatc 9800147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 16789040 - 16789092
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacac 280  Q
    ||||||||||||||||| |||||| ||||||||||| || ||||||| |||||    
T  16789040 ataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacac 16789092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 20503513 - 20503577
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| | ||||||||||| || | |||||||| ||||||||||||| ||||||||| ||||    
T  20503513 gtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgc 20503577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 25775536 - 25775568
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  25775536 cataattcagtgtaattacaagtgtcggtgtcg 25775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 13806270 - 13806344
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatcc 308  Q
    |||| |||||| | ||||||||||||||||||| |  ||||| |||| || ||||| |||| |||||||||||||    
T  13806270 cagtataattatatgtgtcggtgtcgtgtcggtgttagacacaacacatgaccgaccccgggacacgcctaatcc 13806344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 16000130 - 16000096
Alignment:
Q  150 tatgaagcacggatacggatacggacaccgaacac 184  Q
    ||||||||||||||||||| |||||||||||||||    
T  16000130 tatgaagcacggatacggacacggacaccgaacac 16000096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 20503492 - 20503522
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgt 257  Q
    |||||||||||||||||||||||||||||||    
T  20503492 cataattcagtgtaattacaagtgtcggtgt 20503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 25948919 - 25948881
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcgg 265  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  25948919 cataattcagtgtaattataagtgttggtgtcgtgtcgg 25948881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 16192782 - 16192729
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacac 280  Q
    |||||||||||||||||| | |||| | |||||||||||| || ||||||||||    
T  16192782 cataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgacac 16192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 26508137 - 26508166
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtg 256  Q
    ||||||||||||||||||||||||||||||    
T  26508137 cataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 29386543 - 29386494
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacg 276  Q
    |||||||||||||||| | | ||||||||||||||| ||| |||||||||    
T  29386543 cataattcagtgtaatcatatgtgtcggtgtcgtgtaggtatcggacacg 29386494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 8587053 - 8587021
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  8587053 cataattaagtgtaattacaagtgtcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 8593164 - 8593196
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||| |||||||||||||||||||||    
T  8593164 cataattcagtataattacaagtgtcggtgtcg 8593196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 13845536 - 13845472
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||| ||||| | ||||| |  |||||||| |||||||||||||| ||||    
T  13845536 gtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgc 13845472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 14027958 - 14027994
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccgaacac 184  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  14027958 gctatgaagcacggatacggacacggacaccggacac 14027994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 51206385 - 51206353
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||| |||||||||||||||||    
T  51206385 cataattcagtgtaaatacaagtgtcggtgtcg 51206353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 37419773 - 37419866
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||  |||| |||||||||| ||||||||||||| ||||||||| ||||    
T  37419773 aattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 37419866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 30717562 - 30717466
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||  |||||| || | ||||||||||||||||||||| ||||    
T  30717562 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgc 30717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 26769547 - 26769634
Alignment:
Q  236 gtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| || ||||||||||||| ||||||||| ||||    
T  26769547 gtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgc 26769634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 35056896 - 35056991
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||||||  ||||||||| ||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgc 35056991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 36756376 - 36756280
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| |||||||||||||||||  || ||| |||| |||| || ||||||||| |||||||||||||| ||||||||||||||    
T  36756376 cataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgc 36756280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 11223895 - 11223800
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| || | |||||||| ||||||||||||  ||||||||| ||||    
T  11223895 cataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgc 11223800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 15657891 - 15657982
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||||||||||||||||| |||||||||||||| | | |||||| ||||||||| ||||| |||| ||||||||| ||| |||||||||    
T  15657891 cataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtc 15657982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 34785014 - 34784918
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||| | ||||||||||||||||||| ||||||||||||| || | ||||| || |||||||| || | ||||||||||||||    
T  34785014 cataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgc 34784918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 44860347 - 44860443
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| | ||||||||||||||| ||| | |||||||||| ||| |||||| ||| |||| |||||| | ||||||||| ||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgc 44860443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 2438730 - 2438666
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||| || |||||||||| ||||||||||||| ||||||||| ||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 2438666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 12224271 - 12224335
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||| ||||| ||||||| || |||||||||||||||||||||| |||||    
T  12224271 gtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgc 12224335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 315
Target Start/End: Complemental strand, 4882727 - 4882640
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagt 315  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||| || || | | |||| |||||| |||||| | ||||||    
T  4882727 ataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgatacatgtcgggcacctgaacacacctaattcgaggagt 4882640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 12668455 - 12668400
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgt 282  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||    
T  12668455 cataattcagtgtaattataagtgtcggtgtcgtgtcggtattggatacgacacgt 12668400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 14996254 - 14996171
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||| |||||||||||||||||||||||| ||||||      |||| ||||||| | |||||||||||||||||||||| |||||||||    
T  14996254 ataatttagtgtaattacaagtgtcggtgtcttgtcgg------acac-acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 32749857 - 32749766
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||||||||||| | ||||||| ||||||||||| | ||||||  |||| ||| ||||||| || |||||||| ||| ||||||||||    
T  32749857 cataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtc 32749766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 323
Target Start/End: Complemental strand, 36096400 - 36096311
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| |  |||||||||||||||| | |||||||||||||||| | ||||| || |||||||| | |||| ||||||| ||||    
T  36096400 cagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgc 36096311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 24009343 - 24009407
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| | ||||| || |||||||| |||||||||||||| ||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 24009407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 28524453 - 28524533
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||||||||||||| | |||||| ||| |||| ||| |||||||| ||||||| | ||||| | |||||||||||||    
T  28524453 cataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacacagaaacacgcctaatc 28524533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 5040782 - 5040841
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||| |||||||||||| ||| ||||| |||| ||||||||| |||||||||||||    
T  5040782 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtc 5040841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 23058474 - 23058435
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggt 266  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  23058474 cataatccagtgtaattacaagtgtcggtgtcgtgtcggt 23058435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 4207884 - 4207973
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    ||||||| |||||||||| |  ||||||| |||||||||| ||||||||||||||||  |||||||| ||||||  |||||| | ||||||    
T  4207884 cataatttagtgtaattatat-tgtcggtatcgtgtcggtgtcggacacgacacgtgttcgacaccgaaacacgtttaatccgaagagtgt 4207973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 452
Target Start/End: Complemental strand, 4527501 - 4527444
Alignment:
Q  395 tcatagatggttggcacaaaacgatatcatacttcatctttggacaactcactgattc 452  Q
    |||||||||| ||||  ||| |||| |||||||||||||||||||||||| |||||||    
T  4527501 tcatagatggctggcttaaagcgatctcatacttcatctttggacaactctctgattc 4527444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 27084304 - 27084377
Alignment:
Q  246 aagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtct 319  Q
    |||||||| | || ||||||| |||||||||||||||| || ||||||  ||||||||||||  ||||||||||    
T  27084304 aagtgtcgatttcatgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtct 27084377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 33153451 - 33153488
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcg 264  Q
    |||||||||||||||||||||||||| |||||||||||    
T  33153451 cataattcagtgtaattacaagtgtccgtgtcgtgtcg 33153488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 34337201 - 34337152
Alignment:
Q  239 taattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccga 288  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  34337201 taattacaagtgtcggtgtcctgtcggtgtcggacacaacacgtgtccga 34337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 2331821 - 2331914
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtg 322  Q
    |||||||||||||| |||   |||||||||||||||| || |||| |||  |||||| | |||||| | ||||||||||||||| || ||||||||    
T  2331821 cataattcagtgtatttat--gtgtcggtgtcgtgtcagtgtcgggcacagcacgtgtctgacaccaggacacgcctaatccaatgaatgtctgtg 2331914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 2438751 - 2438719
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  2438751 cataattcagtgtaattacaagtgtcggtgtcg 2438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 18421990 - 18422022
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  18421990 cataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 19536429 - 19536397
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  19536429 cataattcagtgtaattacaagtgtcggtgtcg 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 21624294 - 21624326
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcg 21624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 27286324 - 27286228
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||| | |||||  |||| ||||| | ||||||||||||| || |||||||||| |||   |||||| || ||||||||||||    
T  27286324 cataattaagtgtaattataggtgtcaatgtcatgtcgatgtcggacacgacacatgtccgacaccgggacatatctaatctaaagagtgtctgtgc 27286228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 28596517 - 28596581
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| |||||||  | |||| |||||||| ||||||||| ||||    
T  28596517 gtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgc 28596581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 38117170 - 38117106
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| ||| |||||||| ||||||| |||||||||| ||||||||||||| ||| ||||| ||||    
T  38117170 gtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgc 38117106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 262
Target Start/End: Original strand, 974778 - 974809
Alignment:
Q  231 attcagtgtaattacaagtgtcggtgtcgtgt 262  Q
    ||||||||||||||||||||||||||||||||    
T  974778 attcagtgtaattacaagtgtcggtgtcgtgt 974809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 19942314 - 19942372
Alignment:
Q  260 tgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||| ||||||||| || ||| | |||||||| ||||||||||||| |||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtc 19942372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 37419713 - 37419759
Alignment:
Q  164 acggatacggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    |||||||||||||||| ||||||||||| |||||| || ||||||||    
T  37419713 acggatacggacaccggacactgacacgccgacatggcaaataattt 37419759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 259
Target Start/End: Original strand, 44635527 - 44635557
Alignment:
Q  229 taattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||    
T  44635527 taattcagtgtaattacaagtgtcggtgtcg 44635557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 259
Target Start/End: Original strand, 15972903 - 15972932
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||||||||||||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcg 15972932  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 15972921 - 15972970
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatcc 308  Q
    |||||||| |||||||||||||||| ||||| |||| |||| ||||||||    
T  15972921 gtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatcc 15972970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 20539705 - 20539672
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtg 261  Q
    |||||| |||||||||||||||||||||||||||    
T  20539705 ataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 21374809 - 21374768
Alignment:
Q  149 ctatgaagcacggatacggatacggacaccgaacactgacac 190  Q
    |||||||||||||||||||| |||||||||| |||| |||||    
T  21374809 ctatgaagcacggatacggacacggacaccggacacggacac 21374768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 21624327 - 21624376
Alignment:
Q  276 gacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgcat 325  Q
    |||||||| |||||| ||| |||| |||||||||||||||||| ||||||    
T  21624327 gacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgcat 21624376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 5367240 - 5367292
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaag 311  Q
    |||||||| ||||||||||||| |  ||||| |||| ||||||||||||||||    
T  5367240 gtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 17776614 - 17776710
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||| |||||||||||| | ||||| |||||  |||||| | |||||||||  ||| |||||  ||| ||| ||||||||| ||||||||| ||||    
T  17776614 cataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggacacgacgtgtgtccgacctcgggacaggcctaatccgaggagtgtccgtgc 17776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 30404882 - 30404850
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||| ||||    
T  30404882 cataattcagtgtaattacaagtgtcggcgtcg 30404850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 259
Target Start/End: Original strand, 33884082 - 33884110
Alignment:
Q  231 attcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||    
T  33884082 attcagtgtaattacaagtgtcggtgtcg 33884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 37559004 - 37559036
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||| |||||||||||||||||||||||    
T  37559004 cataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 2955 - 3051
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| ||||||||||||||| || ||||||||||||| || |||||||||||||  ||||||||||||||||||||||| ||||||||| ||||    
T  2955 cataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgc 3051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 22652003 - 22652099
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||| ||||||| ||||||||| ||||    
T  22652003 cataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 22652099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 29510333 - 29510240
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||| |||| |||||||| ||||||||| ||||    
T  29510333 aattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgc 29510240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 4673454 - 4673361
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||||| || ||||| ||| | | ||||||||||| | |  |||||||||||||||||||||||||||||||||||||||    
T  4673454 aattcagtgtaattacaagtatcagtgtcttgttgatgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgc 4673361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 15816161 - 15816065
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||||   |||||||||| ||||||||||||| || |||||| ||||    
T  15816161 cataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgc 15816065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 29447142 - 29447046
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| ||||| |||||||||||||||| ||||||| |||||||||||| ||| | |||||| | ||||||||||||| ||||||||| ||||    
T  29447142 cataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgc 29447046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 2572088 - 2572016
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacac 299  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||| ||||    
T  2572088 cataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtccgataccgggacac 2572016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 8343343 - 8343439
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||||||||||| |||||||    || || ||||||||||||| |||||||||| ||||||||||||| | ||||||||||||    
T  8343343 cataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgc 8343439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 22197774 - 22197678
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtc-gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||||||||| |||||||||||  ||||||||| ||||    
T  22197774 cataatttagtgtaattacaagtgtcagtgtcagtgtcg-tgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgc 22197678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 34451037 - 34450968
Alignment:
Q  254 gtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||| |||||||||||||||| | ||||| || |||||||| |||||||||||||| ||||    
T  34451037 gtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 34450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 28745525 - 28745621
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| ||||| ||||| ||||| |||||||||||| ||||||||||||| || ||| |||||  ||| | ||||| ||||||||||| ||||    
T  28745525 cataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgc 28745621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 29447471 - 29447567
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||| | |||| |||||||||||||| || ||||||||| ||| |||||||||| ||| | ||||||  ||||||||| ||||    
T  29447471 cataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgc 29447567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 21465440 - 21465535
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||  ||||||||||||||| ||||||||||| || |||||||||||||||| || |||| || | |||||||||   ||||||||| ||||    
T  21465440 ataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgc 21465535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 27067322 - 27067238
Alignment:
Q  237 tgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||| ||||||||||||| |||||||||||| ||| |  ||||||||  ||| ||||||| ||||||||| ||||    
T  27067322 tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccgga--acgtctaatccgaggagtgtccgtgc 27067238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 3951547 - 3951491
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagt 315  Q
    |||||||| || ||||||||||||| | ||||| |||||||||||||||||||||||    
T  3951547 gtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagt 3951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 5813640 - 5813704
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||   ||||||||| ||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgc 5813704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 11803286 - 11803382
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| | |||| ||||| |||| ||| | ||| ||||||| || ||||||| || ||||| ||||||| ||||||||| ||||    
T  11803286 cataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgc 11803382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  270 ggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 26902207 - 26902111
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| | ||||||||||||| |  || |||||||||||||||| | | ||| || |||||||| |||  ||||||||| ||||    
T  26902207 cataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgc 26902111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 36450765 - 36450701
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||| ||| ||||||||||| |||| |||||||| | ||||||||||||| ||||||||||||||    
T  36450765 gtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgc 36450701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 4122280 - 4122185
Alignment:
Q  228 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||| | |||||||||| |||||  | ||  ||||||||||||   |||||||||||||| ||||||||| ||||||| ||||    
T  4122280 ataattcattgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgttggacaccggaacacgtctaatccaaagagtgtccgtgc 4122185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 6065648 - 6065593
Alignment:
Q  268 tcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||||| || ||||||||||||||||| |||| ||||||||||| ||||    
T  6065648 tcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgc 6065593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 25566868 - 25566903
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgt 262  Q
    ||||||||||||||||||||||||||||||||||||    
T  25566868 cataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 24727784 - 24727694
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||| |||||||||| |||||||  ||||| ||||||| ||| ||| |||||||| || | ||| ||||||||||||||| || |||||    
T  24727784 cataatgcagtgtaatttcaagtgttagtgtcatgtcggtatcgaacatgacacgtgtccaataccagaacacgcctaatccgagaagtgt 24727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 8798838 - 8798805
Alignment:
Q  285 ccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||||||||||||||||||||||||||||||    
T  8798838 ccgacaccggaacacgcctaatccaaggagtgtc 8798805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 13436954 - 13436917
Alignment:
Q  286 cgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgc 13436917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 4948679 - 4948711
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  4948679 cataattcagtgtaattacaagtgtcggtgtcg 4948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 11927118 - 11927022
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| | ||||||||||||||| ||| ||  |||||||| ||  || ||| ||  ||||||||||||| | ||||||| ||||    
T  11927118 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaatccgatgagtgtccgtgc 11927022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 24669460 - 24669492
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  24669460 cataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 22595950 - 22596010
Alignment:
Q  149 ctatgaagcacggatacggatac-ggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    |||||||||||||||||||| || ||||||  |||||||||||| ||||| ||||||||||||    
T  22595950 ctatgaagcacggatacggacaccggacac--aacactgacacgccgacacagctaataattt 22596010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 24362234 - 24362167
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtct-cggacacgacacgtgcccgacaccg 293  Q
    |||||||||||||||||| | |||||  |||||||||||| | ||||||||||||||| ||| |||||    
T  24362234 cataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgacacgtgtccggcaccg 24362167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 40332239 - 40332298
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||| | |||||||||||||| || ||||||| || |||||||||| |||||||||    
T  40332239 gtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtc 40332298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 11944692 - 11944782
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    ||||| |||||||||||| | ||||||||||||||| | | ||  |||||||| ||  |||||||||  ||||||||||||| | ||||||    
T  11944692 cataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgcctaatccgatgagtgt 11944782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 14639787 - 14639737
Alignment:
Q  273 cacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| || |||||||||| ||| |||||||||||||||| |||||||    
T  14639787 cacgacacatgtccgacaccgggacatgcctaatccaaggagtatctgtgc 14639737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 24205830 - 24205760
Alignment:
Q  248 gtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||| ||||| |||||||| ||| |||| || | || | |||||||||||||||||||||| |||||||||    
T  24205830 gtgttggtgttgtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtc 24205760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 40332218 - 40332248
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgt 257  Q
    |||||||||||||||||||||||||||||||    
T  40332218 cataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 4611561 - 4611614
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacac 280  Q
    |||||||||||||||||| | || ||||||  |||||||| |||||||||||||    
T  4611561 cataattcagtgtaattatatgtctcggtgctgtgtcggtatcggacacgacac 4611614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 8342999 - 8343032
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgt 260  Q
    ||||||| ||||||||||||||||||||||||||    
T  8342999 cataatttagtgtaattacaagtgtcggtgtcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 7442872 - 7442920
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacac 275  Q
    ||||||||||||||||||||||||| ||||| || || || ||||||||    
T  7442872 cataattcagtgtaattacaagtgttggtgttgtatcagtgtcggacac 7442920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 12570540 - 12570461
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    ||||||| |||||||||| | |||||| ||| || ||||| || ||||| ||||||| |||||||| | ||||||||||||    
T  12570540 cataattaagtgtaattatatgtgtcgatgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatc 12570461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 20785575 - 20785539
Alignment:
Q  148 gctatgaagcacggatacggatacggacaccgaacac 184  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  20785575 gctatgaagcacggatacggacacggacaccgtacac 20785539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 20873096 - 20873128
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  20873096 cataatttagtgtaattacaagtgtcggtgtcg 20873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 22596021 - 22596053
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||||||||| |||||||    
T  22596021 cataattcagtgtaattacaagtgttggtgtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 24362319 - 24362287
Alignment:
Q  147 tgctatgaagcacggatacggatacggacaccg 179  Q
    ||||||||||||| |||||||||||||||||||    
T  24362319 tgctatgaagcacagatacggatacggacaccg 24362287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 24613547 - 24613579
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||| |||||||||||||||||||||||||    
T  24613547 cataattaagtgtaattacaagtgtcggtgtcg 24613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 29655998 - 29655930
Alignment:
Q  239 taattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    ||||||||||||| || |||||||| || |||||||| |||| |  | ||||||| |||||||||||||    
T  29655998 taattacaagtgtaggcgtcgtgtcagtgtcggacacaacacatatctgacaccgaaacacgcctaatc 29655930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 30077419 - 30077387
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||| ||||||    
T  30077419 cataattcagtgtaattacaagtgtccgtgtcg 30077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 30271287 - 30271255
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||| ||||||||||||||||||||||||||    
T  30271287 cataatgcagtgtaattacaagtgtcggtgtcg 30271255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 31557047 - 31557103
Alignment:
Q  262 tcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||| || |||||||||| || |||||||| | ||||||||||||||||| |||||    
T  31557047 tcggtgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtc 31557103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 33405395 - 33405331
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||||| || | |||||| | ||||| ||||||||| ||||||| ||||    
T  33405395 gtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgc 33405331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 43737822 - 43737758
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||| ||| | ||||| || | |||||| |||||||||||||| ||||    
T  43737822 gtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgc 43737758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 53207 - 53304
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgca 324  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||| |||||||||| |||||  ||||||||| |||||| |||||    
T  53207 cataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgca 53304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 71755 - 71848
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||| |||||||||| ||||| ||||||| ||||||||| ||||    
T  71755 aattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgc 71848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 241621 - 241717
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| ||||||||||  |||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||| || |||||| ||||    
T  241621 cataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgc 241717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 3881 - 3790
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| || |||||| ||  ||||||||||||| |||||||||    
T  3881 cataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtc 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 8667 - 8571
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| || ||||||||| |||||||||||||||||| |||||||||| ||||| ||||||| || ||||||||||| | ||||||||| ||||    
T  8667 cataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgc 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 263404 - 263313
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    |||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||  ||| |||   ||||||||||||| |||||||||    
T  263404 cataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtc 263313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 323
Target Start/End: Complemental strand, 6021 - 5932
Alignment:
Q  234 cagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||||||| | ||||||||||||| ||||| ||| |||||||||||| | ||||| |  |||||||| |||||||||||||| ||||    
T  6021 cagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgc 5932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 23538 - 23634
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| ||||||| ||||||| ||||| |||||||||| | ||| |||| || || |||||| |||||| || ||||| |||||    
T  23538 cataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgtttgtgc 23634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 23447 - 23485
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcgg 265  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  23447 cataattcagtgtaattataagtgtcggtgtcgtgtcgg 23485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 9777 - 9683
Alignment:
Q  229 taattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||| | ||||||||||||||| ||| || |||||||||| || | |||| ||| |||||  |||||| ||||||||| ||||    
T  9777 taattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgc 9683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 473 - 409
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| ||||||||||| |||| |||||||||| |||| |||||||| ||||||||| ||||    
T  473 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgc 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 259
Target Start/End: Complemental strand, 491 - 462
Alignment:
Q  230 aattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||||||||||||||    
T  491 aattcagtgtaattacaagtgtcggtgtcg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 575 - 542
Alignment:
Q  151 atgaagcacggatacggatacggacaccgaacac 184  Q
    |||||||||||||||||| |||||||||||||||    
T  575 atgaagcacggatacggacacggacaccgaacac 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 44557 - 44461
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||||||||| | |||||||| |||||||||| | |||||| ||||||| ||||||| || ||| |  |||||  || |||||||||||    
T  44557 cataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgc 44461  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 20199 - 20238
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggt 266  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20199 cataattcagtgtaattacaagtgtcagtgtcgtgtcggt 20238  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 23797 - 23832
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgt 262  Q
    ||||||||||||||||||||||||||||||||||||    
T  23797 cataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0376 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 305
Target Start/End: Original strand, 6339 - 6417
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaa 305  Q
    ||||||||| |||||||| | ||||||||||||| ||||| | || ||||||||| | ||||| |||||||||| ||||    
T  6339 cataattcaatgtaattatatgtgtcggtgtcgtatcggtgtggggcacgacacgggtccgacgccggaacacgtctaa 6417  T

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Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 13453 - 13531
Alignment:
Q  240 aattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtc 318  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||   ||||| ||| | || |||||||| |||||||||    
T  13453 aattacatgtgtcggggtcgtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtc 13531  T

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Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 14584 - 14633
Alignment:
Q  268 tcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||    
T  14584 tcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgt 14633  T

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Target: scaffold0512 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 5047 - 4983
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||| |||||||||||||||| ||||||  |  ||| ||||||||| ||||||||||||||    
T  5047 gtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgc 4983  T

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Target: scaffold0306 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 13427 - 13518
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||| ||||||||| ||||||||||     || |||||||||||||| | | |||||  | |||| |||||||||||||||||| ||||    
T  13427 cataattcagtgcaattacaagggtcggtgtcg-----gtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgc 13518  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 21900 - 21809
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||| ||||||||| ||||||||||     || |||||||||||||| | | |||||  | |||| |||||||||||||||||| ||||    
T  21900 cataattcagtgcaattacaagggtcggtgtcg-----gtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgc 21809  T

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Target: scaffold0083 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 45562 - 45530
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||||||||||||||||||    
T  45562 cataattcagtgtaattacaagtgtcggtgtcg 45530  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 8846 - 8894
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatc 307  Q
    |||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  8846 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatc 8894  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 8662 - 8713
Alignment:
Q  272 acacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    |||||||||||| ||||||| || | ||||||||||||||||||||| ||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgc 8713  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 51769 - 51827
Alignment:
Q  151 atgaagcacggatacggatacggacaccgaacactgacacgtcgacatagctaataattt 210  Q
    ||||||||| |||| |||||||||||| || |||||||||| ||||| ||||||||||||    
T  51769 atgaagcacagatatggatacggacacgga-cactgacacgccgacacagctaataattt 51827  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 24052 - 24148
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtctcggacacgacac--gtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||||| |||||||||||| || || ||||||||||||| |||||||| ||||  ||| ||||||| || ||||||||||||| | ||||||| ||||    
T  24052 cataatttagtgtaattaca-gtttcagtgtcgtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgc 24148  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 258
Target Start/End: Original strand, 123655 - 123686
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtc 258  Q
    ||||||||||||||||||||||||||||||||    
T  123655 cataattcagtgtaattacaagtgtcggtgtc 123686  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 83187 - 83220
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgt 260  Q
    ||||||||||||||||||||| ||||||||||||    
T  83187 cataattcagtgtaattacaaatgtcggtgtcgt 83220  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 70326 - 70384
Alignment:
Q  259 gtgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgt 317  Q
    |||||||| |||||||||||||||| |||||||| | ||| ||||||||| | ||||||    
T  70326 gtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgt 70384  T

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Target: scaffold0050; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 70305 - 70337
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    |||||||||||||||||| ||||||||||||||    
T  70305 cataattcagtgtaattataagtgtcggtgtcg 70337  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 130509 - 130538
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtg 256  Q
    ||||||||||||||||||||||||||||||    
T  130509 cataattcagtgtaattacaagtgtcggtg 130538  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 178850 - 178813
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcgtgtcg 264  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  178850 cataattcagtgtaattacaagtgtcagtgtcatgtcg 178813  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 174563 - 174510
Alignment:
Q  260 tgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaagga 313  Q
    ||||||| | ||||||| || ||| |||||| ||||||||||||||||||||||    
T  174563 tgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaagga 174510  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 180076 - 180023
Alignment:
Q  260 tgtcggtctcggacacgacacgtgcccgacaccggaacacgcctaatccaagga 313  Q
    ||||||| | ||||||| || ||| |||||| ||||||||||||||||||||||    
T  180076 tgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaagga 180023  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 46709 - 46741
Alignment:
Q  227 cataattcagtgtaattacaagtgtcggtgtcg 259  Q
    ||||||||||||||||||||| |||||||||||    
T  46709 cataattcagtgtaattacaaatgtcggtgtcg 46741  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 90903 - 90955
Alignment:
Q  271 gacacgacacgtgcccgacaccggaacacgcctaatccaaggagtgtctgtgc 323  Q
    ||||| ||||||| ||||||||  |||||||||||||||| |||||| |||||    
T  90903 gacacaacacgtgtccgacaccaaaacacgcctaatccaatgagtgtatgtgc 90955  T

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