View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5566_high_2 (Length: 239)
Name: NF5566_high_2
Description: NF5566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5566_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 25897515 - 25897737
Alignment:
| Q |
1 |
tgattgttggaacacatacttcaaagattccattttcaaagtgttgtcgaactagagatttagccaaggtatcaactaatgatcctcagttataattccc |
100 |
Q |
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| T |
25897515 |
tgattgttggaacacatacttcaaagattccattttcaaagtgttgtcgaactagagatttagccaaggtatcaactaatgatcctcagttataattccc |
25897614 |
T |
|
| Q |
101 |
ttgcttcaagggattaaaaaatctcaaaaatattgaacaaatcatactctactttttgaaactaaatttgaaacatgaattgtttgattttcatttaatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
25897615 |
ttgcttcaagggattaaaaaatctcaaaaatattgaacaaatcatactctactttttgaaactaaatttgaaatatgaattgtttgattttcatttaatg |
25897714 |
T |
|
| Q |
201 |
ataattagattcatgaatcattt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
25897715 |
ataattagattcatgaatcattt |
25897737 |
T |
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