View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5567-Insertion-1 (Length: 1067)

Name: NF5567-Insertion-1
Description: NF5567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5567-Insertion-1
NF5567-Insertion-1
[»] chr7 (42 HSPs)
chr7 (10-506)||(33601668-33602166)
chr7 (24-459)||(33601060-33601500)
chr7 (608-699)||(33602264-33602355)
chr7 (765-878)||(33602421-33602528)
chr7 (308-459)||(17944282-17944434)
chr7 (305-458)||(27863661-27863815)
chr7 (305-459)||(48470023-48470178)
chr7 (305-459)||(19302499-19302650)
chr7 (305-456)||(420342-420494)
chr7 (305-429)||(11619094-11619218)
chr7 (349-459)||(30570911-30571022)
chr7 (349-459)||(39967899-39968010)
chr7 (308-459)||(19022524-19022676)
chr7 (305-456)||(34744010-34744162)
chr7 (334-425)||(38499878-38499969)
chr7 (328-429)||(21568454-21568555)
chr7 (612-657)||(33602132-33602177)
chr7 (305-425)||(36517593-36517711)
chr7 (305-397)||(5947283-5947375)
chr7 (365-459)||(48507701-48507797)
chr7 (381-459)||(46280284-46280363)
chr7 (355-429)||(39629943-39630017)
chr7 (316-460)||(45593505-45593651)
chr7 (310-438)||(19214347-19214476)
chr7 (312-411)||(3927953-3928052)
chr7 (305-459)||(20526425-20526580)
chr7 (364-459)||(45338428-45338523)
chr7 (90-163)||(7244665-7244739)
chr7 (310-459)||(33678759-33678909)
chr7 (358-419)||(20428494-20428555)
chr7 (349-425)||(5947198-5947274)
chr7 (349-429)||(28614443-28614523)
chr7 (305-425)||(34035931-34036051)
chr7 (323-460)||(3308205-3308344)
chr7 (365-455)||(38138475-38138566)
chr7 (305-459)||(39907782-39907935)
chr7 (400-457)||(4970824-4970882)
chr7 (364-441)||(28341052-28341129)
chr7 (355-411)||(28900903-28900960)
chr7 (305-390)||(34464157-34464242)
chr7 (351-459)||(39279941-39280050)
chr7 (321-425)||(44989629-44989734)
[»] chr8 (34 HSPs)
chr8 (306-459)||(26771244-26771398)
chr8 (311-460)||(38648329-38648479)
chr8 (308-459)||(18133635-18133787)
chr8 (305-459)||(10758193-10758347)
chr8 (305-459)||(27028810-27028965)
chr8 (305-429)||(12976223-12976346)
chr8 (305-459)||(35534549-35534702)
chr8 (305-454)||(30251390-30251540)
chr8 (305-425)||(31716163-31716283)
chr8 (309-412)||(35643928-35644031)
chr8 (308-427)||(43045664-43045783)
chr8 (305-419)||(1058013-1058126)
chr8 (349-460)||(25930533-25930646)
chr8 (304-425)||(35749505-35749626)
chr8 (349-406)||(8146362-8146419)
chr8 (309-390)||(28763417-28763498)
chr8 (304-459)||(42043290-42043436)
chr8 (322-457)||(6881908-6882044)
chr8 (305-389)||(36963290-36963374)
chr8 (310-425)||(1930049-1930164)
chr8 (349-412)||(10120783-10120846)
chr8 (305-459)||(15180520-15180673)
chr8 (349-459)||(16825518-16825628)
chr8 (327-457)||(29168015-29168146)
chr8 (349-459)||(29205787-29205897)
chr8 (305-384)||(41589641-41589720)
chr8 (90-163)||(20672735-20672809)
chr8 (349-459)||(37945576-37945686)
chr8 (305-383)||(40859719-40859796)
chr8 (305-425)||(43717870-43717993)
chr8 (305-397)||(32840922-32841014)
chr8 (351-429)||(16347200-16347279)
chr8 (305-339)||(9130255-9130289)
chr8 (349-438)||(9956794-9956884)
[»] chr4 (40 HSPs)
chr4 (305-459)||(17822801-17822956)
chr4 (305-454)||(21731592-21731742)
chr4 (305-429)||(54426053-54426177)
chr4 (315-459)||(50681035-50681180)
chr4 (321-429)||(30668320-30668426)
chr4 (311-448)||(50662680-50662818)
chr4 (305-429)||(26801-26924)
chr4 (308-423)||(13126515-13126630)
chr4 (305-451)||(22030190-22030337)
chr4 (309-459)||(53294054-53294205)
chr4 (349-430)||(29657393-29657474)
chr4 (308-425)||(55302263-55302380)
chr4 (311-423)||(24169279-24169391)
chr4 (311-454)||(2244032-2244179)
chr4 (305-426)||(25904159-25904280)
chr4 (355-451)||(55414406-55414503)
chr4 (352-457)||(7839344-7839450)
chr4 (305-429)||(39603107-39603230)
chr4 (305-455)||(35571567-35571718)
chr4 (81-177)||(30668012-30668099)
chr4 (349-451)||(46588053-46588157)
chr4 (308-397)||(49939890-49939979)
chr4 (305-392)||(15173239-15173326)
chr4 (379-453)||(16199991-16200066)
chr4 (323-459)||(25332753-25332891)
chr4 (305-374)||(437100-437169)
chr4 (360-456)||(41512633-41512730)
chr4 (364-429)||(46592204-46592269)
chr4 (305-425)||(1706636-1706756)
chr4 (352-412)||(21523585-21523644)
chr4 (349-397)||(41336802-41336850)
chr4 (305-372)||(52172791-52172859)
chr4 (351-457)||(2996554-2996660)
chr4 (231-286)||(30668248-30668303)
chr4 (356-425)||(1407970-1408040)
chr4 (96-145)||(18011874-18011924)
chr4 (349-459)||(37863935-37864043)
chr4 (349-419)||(55064855-55064925)
chr4 (355-459)||(54069403-54069508)
chr4 (90-146)||(55547055-55547112)
[»] chr5 (37 HSPs)
chr5 (305-459)||(16937819-16937974)
chr5 (325-459)||(16457935-16458070)
chr5 (305-460)||(10639931-10640087)
chr5 (305-459)||(39105443-39105599)
chr5 (305-451)||(43300865-43301012)
chr5 (305-425)||(9202684-9202804)
chr5 (309-459)||(29925820-29925970)
chr5 (305-458)||(40426745-40426899)
chr5 (305-390)||(31038333-31038418)
chr5 (305-390)||(31047557-31047642)
chr5 (305-425)||(7705934-7706054)
chr5 (305-425)||(7984983-7985103)
chr5 (305-429)||(12857274-12857398)
chr5 (349-429)||(12857685-12857765)
chr5 (310-426)||(42500184-42500298)
chr5 (324-456)||(32009674-32009808)
chr5 (349-413)||(3735138-3735202)
chr5 (305-424)||(35445780-35445898)
chr5 (312-425)||(19460330-19460442)
chr5 (901-990)||(37605999-37606092)
chr5 (352-429)||(37954696-37954773)
chr5 (305-425)||(15246847-15246967)
chr5 (349-440)||(1465000-1465091)
chr5 (361-455)||(25461074-25461169)
chr5 (305-438)||(11700163-11700296)
chr5 (349-459)||(2568636-2568747)
chr5 (305-429)||(9107100-9107224)
chr5 (305-341)||(22209760-22209796)
chr5 (349-412)||(34669709-34669773)
chr5 (356-412)||(35446082-35446138)
chr5 (306-397)||(36797032-36797124)
chr5 (305-384)||(3520632-3520711)
chr5 (305-412)||(3932612-3932719)
chr5 (371-425)||(4014426-4014480)
chr5 (90-157)||(12521518-12521587)
chr5 (355-429)||(39477893-39477967)
chr5 (349-382)||(2973524-2973557)
[»] chr3 (41 HSPs)
chr3 (305-451)||(18405767-18405914)
chr3 (305-459)||(39980708-39980863)
chr3 (305-459)||(20880455-20880610)
chr3 (305-459)||(30443872-30444027)
chr3 (312-460)||(53789406-53789553)
chr3 (305-429)||(24085274-24085398)
chr3 (305-459)||(584025-584180)
chr3 (305-459)||(21367646-21367801)
chr3 (305-392)||(31365124-31365211)
chr3 (349-459)||(36631031-36631142)
chr3 (305-425)||(3845499-3845618)
chr3 (305-425)||(46031004-46031124)
chr3 (353-459)||(402526-402633)
chr3 (346-429)||(901934-902017)
chr3 (305-459)||(46778127-46778281)
chr3 (305-425)||(34610742-34610862)
chr3 (349-459)||(20170502-20170613)
chr3 (307-439)||(22203429-22203561)
chr3 (305-459)||(31365245-31365391)
chr3 (367-459)||(35959454-35959547)
chr3 (306-397)||(49556900-49556997)
chr3 (361-441)||(46478684-46478767)
chr3 (305-459)||(13715508-13715665)
chr3 (312-379)||(34034158-34034225)
chr3 (379-460)||(47132309-47132391)
chr3 (349-457)||(37689212-37689319)
chr3 (90-158)||(46407905-46407974)
chr3 (356-459)||(4401026-4401127)
chr3 (305-425)||(39602147-39602266)
chr3 (392-459)||(44061046-44061114)
chr3 (349-425)||(45541585-45541660)
chr3 (305-372)||(24684758-24684825)
chr3 (355-426)||(28795839-28795910)
chr3 (311-426)||(37389196-37389311)
chr3 (305-459)||(46886628-46886783)
chr3 (305-392)||(51929293-51929380)
chr3 (307-425)||(466207-466325)
chr3 (305-411)||(9832691-9832797)
chr3 (402-459)||(30956659-30956717)
chr3 (402-459)||(30972471-30972529)
chr3 (387-425)||(33883768-33883806)
[»] chr2 (48 HSPs)
chr2 (305-459)||(41851514-41851669)
chr2 (305-459)||(15757594-15757750)
chr2 (308-457)||(43279466-43279616)
chr2 (305-459)||(45229491-45229645)
chr2 (308-459)||(18066107-18066259)
chr2 (305-441)||(26202025-26202162)
chr2 (305-451)||(20952342-20952489)
chr2 (305-459)||(39659445-39659600)
chr2 (347-421)||(33981140-33981214)
chr2 (349-459)||(41812072-41812181)
chr2 (305-409)||(449877-449981)
chr2 (308-459)||(32592566-32592717)
chr2 (305-459)||(1625879-1626034)
chr2 (305-459)||(41241069-41241223)
chr2 (305-430)||(750679-750804)
chr2 (312-459)||(12464416-12464564)
chr2 (305-397)||(19608569-19608661)
chr2 (317-425)||(41293111-41293219)
chr2 (322-429)||(7035520-7035627)
chr2 (352-456)||(5745768-5745873)
chr2 (305-445)||(9174808-9174949)
chr2 (305-459)||(33319752-33319903)
chr2 (305-425)||(4606939-4607059)
chr2 (305-413)||(13325596-13325704)
chr2 (305-369)||(27317449-27317513)
chr2 (308-384)||(30331806-30331882)
chr2 (305-428)||(10619156-10619279)
chr2 (305-372)||(42659147-42659214)
chr2 (305-419)||(31561678-31561792)
chr2 (305-379)||(42419853-42419927)
chr2 (305-421)||(7928234-7928351)
chr2 (365-426)||(20926516-20926577)
chr2 (351-459)||(40279176-40279285)
chr2 (305-422)||(43036574-43036690)
chr2 (305-451)||(2142640-2142788)
chr2 (305-412)||(15305701-15305808)
chr2 (349-424)||(16451133-16451208)
chr2 (349-459)||(26626852-26626963)
chr2 (349-432)||(33192209-33192291)
chr2 (357-411)||(2227194-2227248)
chr2 (96-145)||(3067396-3067446)
chr2 (311-425)||(42457962-42458076)
chr2 (349-407)||(43570446-43570503)
chr2 (349-426)||(1647249-1647325)
chr2 (357-460)||(12289774-12289879)
chr2 (305-425)||(26143578-26143696)
chr2 (305-426)||(36534781-36534902)
chr2 (305-390)||(38916245-38916330)
[»] chr1 (49 HSPs)
chr1 (305-429)||(2295106-2295230)
chr1 (319-451)||(49938734-49938867)
chr1 (305-459)||(3233951-3234106)
chr1 (309-459)||(13809977-13810128)
chr1 (305-459)||(14576590-14576744)
chr1 (305-429)||(29904761-29904885)
chr1 (349-426)||(15477578-15477655)
chr1 (324-459)||(17603339-17603475)
chr1 (352-459)||(24915034-24915142)
chr1 (346-458)||(37631536-37631649)
chr1 (305-459)||(6556950-6557106)
chr1 (318-460)||(27970243-27970387)
chr1 (317-459)||(27976574-27976725)
chr1 (349-459)||(30286499-30286611)
chr1 (305-459)||(473143-473297)
chr1 (308-456)||(2777874-2778022)
chr1 (305-441)||(43230708-43230843)
chr1 (361-458)||(51688685-51688782)
chr1 (305-429)||(5720935-5721059)
chr1 (354-457)||(51929524-51929628)
chr1 (349-424)||(37473418-37473493)
chr1 (305-392)||(42575405-42575492)
chr1 (305-429)||(5741616-5741740)
chr1 (305-459)||(41195132-41195284)
chr1 (361-452)||(42174841-42174933)
chr1 (322-454)||(36872716-36872845)
chr1 (305-392)||(37517102-37517189)
chr1 (305-396)||(38001639-38001729)
chr1 (349-459)||(41184630-41184741)
chr1 (328-426)||(27820156-27820253)
chr1 (309-419)||(38018304-38018414)
chr1 (305-429)||(27146191-27146315)
chr1 (362-458)||(27820330-27820427)
chr1 (349-422)||(38503445-38503518)
chr1 (349-451)||(40977383-40977487)
chr1 (374-459)||(47432075-47432160)
chr1 (305-456)||(1432497-1432649)
chr1 (349-425)||(7136979-7137054)
chr1 (308-451)||(14331970-14332112)
chr1 (305-357)||(14385729-14385781)
chr1 (319-426)||(33186318-33186426)
chr1 (349-440)||(37842336-37842427)
chr1 (305-369)||(38247397-38247461)
chr1 (90-141)||(11893604-11893655)
chr1 (305-384)||(37617401-37617480)
chr1 (403-457)||(39596578-39596633)
chr1 (308-383)||(52863290-52863365)
chr1 (387-456)||(49888749-49888819)
chr1 (352-405)||(36872299-36872352)
[»] chr6 (26 HSPs)
chr6 (309-425)||(31813175-31813291)
chr6 (355-457)||(34430447-34430550)
chr6 (355-425)||(9763574-9763644)
chr6 (315-456)||(20368127-20368268)
chr6 (310-447)||(24982696-24982834)
chr6 (305-406)||(848022-848122)
chr6 (351-459)||(9093538-9093647)
chr6 (305-377)||(4163215-4163287)
chr6 (305-377)||(4224836-4224908)
chr6 (349-459)||(2735048-2735159)
chr6 (374-456)||(6536597-6536680)
chr6 (389-459)||(6909892-6909963)
chr6 (309-412)||(9912131-9912234)
chr6 (304-459)||(24626274-24626422)
chr6 (305-380)||(30926578-30926653)
chr6 (349-427)||(35070630-35070708)
chr6 (323-456)||(35099019-35099152)
chr6 (135-194)||(9027508-9027568)
chr6 (304-384)||(9559357-9559437)
chr6 (352-459)||(18076175-18076290)
chr6 (308-372)||(30536570-30536634)
chr6 (901-951)||(31559483-31559535)
chr6 (349-421)||(31624108-31624179)
chr6 (311-397)||(19411491-19411577)
chr6 (387-459)||(837234-837307)
chr6 (127-163)||(31672538-31672575)
[»] scaffold0221 (1 HSPs)
scaffold0221 (308-425)||(22245-22362)
[»] scaffold0528 (1 HSPs)
scaffold0528 (305-390)||(918-1003)
[»] scaffold0050 (1 HSPs)
scaffold0050 (325-425)||(58756-58856)
[»] scaffold0057 (1 HSPs)
scaffold0057 (305-372)||(24688-24755)


Alignment Details
Target: chr7 (Bit Score: 463; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 10 - 506
Target Start/End: Original strand, 33601668 - 33602166
Alignment:
Q  10 aataaacatcaaacaatattgaagctctggaaaaatttatagatataaattctgacatgaaacaacttgcaacatatccctaagttgtttttagcttatt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33601668 aataaacatcaaacaatattgaagctctggaaaaatttatagatataaattctgacatgaaacaacttgcaacatatccttaagttgtttttagcttatt 33601767  T
Q  110 ttcataaagtcttcacaatagcttataaaacagtttgactttattttattttttagtgtagaaataactcatgataagcacttatgttgtaagctactaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601768 ttcataaagtcttcacaatagcttataaaacagtttgactttattttattttttagtgtagaaataactcatgataagcacttatgttgtaagctactaa 33601867  T
Q  210 gcatttaattaatctatgtatggctatgcaattagaattttaatccaaaggtacaattacaatgcttaaagaaactaaagcctgtttggattagattgag 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601868 gcatttaattaatctatgtatggctatgcaattagaattttaatccaaaggtacaattacaatgcttaaagaaactaaagcctgtttggattagattgag 33601967  T
Q  310 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601968 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 33602067  T
Q  410 ctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaatacnnnnnnnctataacgaaattg--ctgttacgttgattttccagatc 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||  |||||||||||||||||||||||    
T  33602068 ctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaatacaaaaaaactataacgaaattgctctgttacgttgattttccagatc 33602166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 24 - 459
Target Start/End: Original strand, 33601060 - 33601500
Alignment:
Q  24 aatattgaagctctggaaaaatttatagatataaattctgacatgaaacaacttgcaacatatccctaagttgtttttagcttattttcataaagtcttc 123  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  33601060 aatattaaagctttggaaaaatttatagatataaattctgacatgaaacaacttgcaacatatccctaagttgtttttagcttattttcataaactcttt 33601159  T
Q  124 acaatagcttat-aaaacagtttgactttattttattttttagtgtagaaataactcatgataagcacttatgttgtaagctactaagcatttaattaat 222  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||  ||||||||||    
T  33601160 gcaatagcttatgaaaacagtttgactttattttattttttagtgtagaaataactcatgataagcacttatgctgcaagctaccgagtgtttaattaat 33601259  T
Q  223 ctatgtatggctatgcaattagaattttaatccaaaggtacaattacaatgcttaaagaaactaaagcctgtttggattaga----ttgagcttatctac 318  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||    |||||||||||||     
T  33601260 ctatgtttggctattcaattagaatttcaatccaaaggtacaattactatgcttaaagaaactaaagccggtttggaattgattatttgagcttatctat 33601359  T
Q  319 tggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagat 418  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33601360 tggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaattcataagttctctaagat 33601459  T
Q  419 agcttataaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  33601460 agcttataaaacaacttatagcaaatacaaaaataatttaa 33601500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 608 - 699
Target Start/End: Original strand, 33602264 - 33602355
Alignment:
Q  608 ctaaaacgaaattgctctgttacgttgattttccaaatccaaaactacaagcaaataataaacacttaccaatttcggattcaccattcatg 699  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602264 ctaaaacgaaattgctctgttacgttgattttccagatccaaaactacaagcaaataataaacacttaccaatttcggattcaccattcatg 33602355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 765 - 878
Target Start/End: Original strand, 33602421 - 33602528
Alignment:
Q  765 aaatgaaatatggtttgttatatggcggcaaaagtgaataagaaacggttagaagtatgagctggcaaatagcgaaatagtgaaatgaaatattaaacga 864  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||    
T  33602421 aaatgaaatatggtttgttatatggcggcaaaagtgaataagaaacgattagaagtatgagctggcaaatagc------atgaaatgaaatattaaacga 33602514  T
Q  865 ttaaatatgttttt 878  Q
    ||||||||||||||    
T  33602515 ttaaatatgttttt 33602528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 308 - 459
Target Start/End: Original strand, 17944282 - 17944434
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||||||||||||| ||| ||||||| |||  || ||||||| ||||||||||||||||||||||||| || ||||||||||||| |||||||     
T  17944282 agcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacacttttcatatgcttttttcagcttaatttcataaa 17944381  T
Q  408 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    || || |||||| ||||| ||||| ||||| | || |||||||||||||||||    
T  17944382 ttatccaagataacttatgaaaacaacttacaacatatacaaaaacaatttaa 17944434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 305 - 458
Target Start/End: Original strand, 27863661 - 27863815
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||| ||||||||||||||| ||||||| |||  || ||||||||||||||||||  || | |||||| || | ||||||||||||  |||||    
T  27863661 ttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttatgttcat 27863760  T
Q  405 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattta 458  Q
    ||||||||||| |||| ||| |||||| |||||||||| ||||||| | ||||||    
T  27863761 aagttctctaatatagtttattaaaacaacttatagcatatacaaataaaattta 27863815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 48470178 - 48470023
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||  | |||||||||||||||| | |||  || ||||||||||||||||||||| || ||||||||||| ||||| ||||||  |||||    
T  48470178 ttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagcttatgttcat 48470079  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| |  || ||||||||| ||||| |||||||  | |||||||||||||||||    
T  48470078 aagttattcaaaatagcttatgaaaacaacttatattatatacaaaaacaatttaa 48470023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 19302499 - 19302650
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||||||| ||||| | |||  || || ||||||||||||||||||||| ||||||||| | ||||||| ||||  |||||    
T  19302499 ttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaacttttttcaacttattttcat 19302598  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||     ||||||||| ||||| ||||||| || |||||||||||||||||    
T  19302599 aagttct----tatagcttataaaaacaacttataacatatacaaaaacaatttaa 19302650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 305 - 456
Target Start/End: Complemental strand, 420494 - 420342
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||| ||||||||| |||| ||| ||||||| |||  || ||||||||||||||  |||||||| |||||  |||||||||||| ||||  |||||    
T  420494 ttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttcaacttattttcat 420395  T
Q  405 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaatt 456  Q
    |||||||| || ||||||||   |||| |||||||||| ||||||||||||||    
T  420394 aagttctccaatatagcttacggaaacaacttatagcatatacaaaaacaatt 420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 11619094 - 11619218
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||| || |||| ||   ||  || || ||||||||||| ||||||||| ||||||||||| ||||||| ||||| |||||    
T  11619094 ttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagcttttttcaacttaatttcat 11619193  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    |||||||| ||  ||||||||||||    
T  11619194 aagttctccaacgtagcttataaaa 11619218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 30570911 - 30571022
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaataca 447  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||  |||| ||||||||||||| ||  ||| ||||||||  | ||||||||| |||||    
T  30570911 aacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatataca 30571010  T
Q  448 aaaacaatttaa 459  Q
    |||| |||||||    
T  30571011 aaaataatttaa 30571022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 39968010 - 39967899
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 447  Q
    ||||||||||||||||||||| || | |||||||||  |||||| ||||  ||||| |||||||| ||||||||||| ||||| ||||||||| | |||     
T  39968010 aacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagctagtacg 39967911  T
Q  448 aaaacaatttaa 459  Q
    ||||||||||||    
T  39967910 aaaacaatttaa 39967899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 308 - 459
Target Start/End: Original strand, 19022524 - 19022676
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    ||||||||||||| ||| |||||| ||||| | |||  || || ||||||||||| ||||||||| ||||||||||   | |||| ||||  ||||||||    
T  19022524 agcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataag 19022623  T
Q  408 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| || ||||||||| ||||| ||||||||||  ||  ||||||||||||    
T  19022624 ttctccaatatagcttataaaaacaacttatagcatttattaaaacaatttaa 19022676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 456
Target Start/End: Complemental strand, 34744162 - 34744010
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||  |||||| ||| ||||||| |||   | |||| ||||||| | ||||||||| |||||| |||| ||||||  ||||  || ||    
T  34744162 ttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagcttttttcgccttatttttat 34744063  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    |||||||| || ||||||||| ||||| ||||||| || ||||||||||||||    
T  34744062 aagttctccaatatagcttatgaaaacaacttataccatatacaaaaacaatt 34744010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 334 - 425
Target Start/End: Original strand, 38499878 - 38499969
Alignment:
Q  334 gagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 425  Q
    ||||||||||  || ||||| | |||||||||||||||| ||||||||||| |||| |||||||  ||||||||||||| ||||| ||||||    
T  38499878 gagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaagattgcttat 38499969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 21568454 - 21568555
Alignment:
Q  328 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa 427  Q
    |||| ||||||| |||  || |||||||||||||||||||| ||| |||||||||||  |||||| ||||  | ||||||||||| || |||||||||||    
T  21568454 ttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataa 21568553  T
Q  428 aa 429  Q
    ||    
T  21568554 aa 21568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 612 - 657
Target Start/End: Original strand, 33602132 - 33602177
Alignment:
Q  612 aacgaaattgctctgttacgttgattttccaaatccaaaactacaa 657  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  33602132 aacgaaattgctctgttacgttgattttccagatccaaaactacaa 33602177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 36517711 - 36517593
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||| ||||||||||||||||| | ||||| |||  || ||||||| |||||||||  ||||| | |||||||||  ||||||| |||  |||||    
T  36517711 ttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcataagctattttcagtttattttcat 36517614  T
Q  405 aagttctctaagatagcttat 425  Q
    || ||||| ||||||||||||    
T  36517613 aatttctccaagatagcttat 36517593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 5947375 - 5947283
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 397  Q
    ||||||||||||| ||| ||||||||||||||||| |||   | ||||| ||||| |||||||||||| |||||||| || |||| |||||||    
T  5947375 ttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttatgacatttttcatatgctttttacagctta 5947283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 365 - 459
Target Start/End: Complemental strand, 48507797 - 48507701
Alignment:
Q  365 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaa-gatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| |||| |||||  ||||||||||||| |||||||||||||||| ||| |||||| |||||   |||||||| |||||||||||||||||    
T  48507797 ttatgacattttttataagtatttttcagcttaatttcataagttctctaaggatggcttatgaaaacagtttatagcatatacaaaaacaatttaa 48507701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 459
Target Start/End: Original strand, 46280284 - 46280363
Alignment:
Q  381 aagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 459  Q
    |||| ||||||||| ||  ||||||||||||| || ||||||||||||| || ||||||||| |||||||||||||||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaatttaa 46280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 39629943 - 39630017
Alignment:
Q  355 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| | |||||||||||  || |||||||| ||||    
T  39629943 tgaaaacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaa 39630017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 460
Target Start/End: Complemental strand, 45593651 - 45593505
Alignment:
Q  316 tactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt-cagcttaaattcataagttctcta 414  Q
    ||||| |||||| ||| ||||||| |||  || ||||||| |||||| || |||||| ||||||||||| ||||| ||| |||  ||| ||||||||| |    
T  45593651 tactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcataagcttttttccagtttattttcgtaagttctcca 45593552  T
Q  415 agatagcttataaaacca-cttatagcaaatacaaaaacaatttaat 460  Q
    |||||||||| ||||  | ||||||||| |||||||||  |||||||    
T  45593551 agatagcttagaaaaatagcttatagcatatacaaaaaatatttaat 45593505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 310 - 438
Target Start/End: Original strand, 19214347 - 19214476
Alignment:
Q  310 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 409  Q
    |||||||||  ||||||||||| ||||| | |||  || ||||||||||||||||  |||||| ||||||||| | | ||||| ||||  ||||||||||    
T  19214347 cttatctacatgcataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagtt 19214446  T
Q  410 ctctaagatagcttata-aaaccacttata 438  Q
    ||  || |||||||||| |||| |||||||    
T  19214447 ctacaatatagcttatacaaacaacttata 19214476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 411
Target Start/End: Original strand, 3927953 - 3928052
Alignment:
Q  312 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 411  Q
    |||||||| ||||||||||| ||||||| |||  || || || | ||||||  |||||||| ||||||||||| ||||||| ||||  ||||||||||||    
T  3927953 tatctactagcataagttttgtgagactatttgagagaattttttaaaacaatttatgacaattttcataagcttttttcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 20526580 - 20526425
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||||| ||| | || |||| ||||||| |||  || ||||||||||||||| |||| ||| ||||| |||||  |||| ||||||  |||||    
T  20526580 ttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcat 20526481  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
     ||||||| || ||||||||| |||||  |||||||||  |||||| | |||||||    
T  20526480 tagttctccaaaatagcttatgaaaacagcttatagcatgtacaaacataatttaa 20526425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 459
Target Start/End: Complemental strand, 45338523 - 45338428
Alignment:
Q  364 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||||| |||| || ||  ||||||| ||||  ||||| ||||||| || |||||||| ||||| ||||| |||| |||||||||||||||||    
T  45338523 cttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagcttaaaaaacaacttacagcatatacaaaaacaatttaa 45338428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 7244739 - 7244665
Alignment:
Q  90 taagttgtttttagcttattttcataaagtcttcacaatagcttat-aaaacagtttgactttattttatttttt 163  Q
    ||||||||||| |||||||||||||||  ||| ||  ||||||||| |||||||||||||||| |||||| ||||    
T  7244739 taagttgttttcagcttattttcataagctctccaatatagcttatgaaaacagtttgactttcttttatctttt 7244665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 310 - 459
Target Start/End: Complemental strand, 33678909 - 33678759
Alignment:
Q  310 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 409  Q
    |||||||||| ||||||||||| ||||||  |||  || |||||||||||||| ||||| ||| | ||||| ||   |||||| ||||  |||| |||||    
T  33678909 cttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttcaacttattttcacaagtt 33678810  T
Q  410 ctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
     || |||||||||||| |||||  ||||||||   ||||||||| ||||||    
T  33678809 ttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaa 33678759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 20428555 - 20428494
Alignment:
Q  358 aaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 419  Q
    ||||||||||||||| || |||||||| ||||||||||||  ||| ||||||| ||||||||    
T  20428555 aaacagcttatgacagttctcataagcttttttcagcttattttcgtaagttccctaagata 20428494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 5947274 - 5947198
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 425  Q
    ||||| ||||| ||||||||| || |||||||||||  |||||||||||  ||||||| |||||  |||||||||||    
T  5947274 aacttttgaaaccagcttatggcatttttcataagctcttttcagcttattttcataacttctcctagatagcttat 5947198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 429
Target Start/End: Complemental strand, 28614523 - 28614443
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    |||||||||||||| | ||| ||| |||||| |||| |||||||| |||| ||||||||||||| || | ||||| |||||    
T  28614523 aacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaa 28614443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 34036051 - 34035931
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||| || || |||||||  ||   | |||||||||||| | ||||||||| | ||||||||   |||||| ||||  |||      
T  34036051 ttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgc 34035952  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||||||||||||||||    
T  34035951 aagttctctaagatagcttat 34035931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 460
Target Start/End: Original strand, 3308205 - 3308344
Alignment:
Q  323 ataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttt-tcataagcctttttcagcttaaattcataagttctctaagatagc 421  Q
    |||||||||||| |||| |||  || ||||| |||||| |||||||| || ||| |||||||| ||||||||||||  || |||||||||| || ||| |    
T  3308205 ataagttttatgtgactgtttgggagaacttttgaaaatagcttatgccattttctcataagcttttttcagcttattttaataagttctcaaacataac 3308304  T
Q  422 ttat-aaaaccacttatagcaaatacaaaaacaatttaat 460  Q
    || | ||||   ||||||||| ||| | ||||||||||||    
T  3308305 ttctgaaaatatcttatagcatataaataaacaatttaat 3308344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 455
Target Start/End: Original strand, 38138475 - 38138566
Alignment:
Q  365 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 455  Q
    |||||||| ||||||||||| ||||||| ||||  |||||||||||   || |||||| || ||||| |||||||||| |||||||| ||||    
T  38138475 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 38138566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 39907935 - 39907782
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| ||| || ||||||||| ||||||| |||  || ||||| | |||  |||||||| || | ||||| |||  |||||||||||  |||||    
T  39907935 ttgagcttatatacagggataagttttgtgagactgtttgagagaacttgtaaaatgagcttatg-ca-tgttcattagctgttttcagcttattttcat 39907838  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
     ||||||||||||||| |||| |||||   |||||||  |||||||||||||||||    
T  39907837 tagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaa 39907782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 4970824 - 4970882
Alignment:
Q  400 ttcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaattt 457  Q
    |||||||||||||||| ||| ||||| ||||  |||||||||| |||||||||||||||    
T  4970824 ttcataagttctctaatatatcttataaaaagaacttatagcatatacaaaaacaattt 4970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 364 - 441
Target Start/End: Original strand, 28341052 - 28341129
Alignment:
Q  364 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagca 441  Q
    ||||||||| |||||| |||| |||| |||||||  |||||||||||||||| |||| ||||| |||| ||||||||||    
T  28341052 cttatgacaattttcaaaagctttttccagcttat-ttcataagttctctaatatagtttatacaaacaacttatagca 28341129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 28900960 - 28900903
Alignment:
Q  355 tgaaaacagcttatgacacttt-tcataagcctttttcagcttaaattcataagttct 411  Q
    |||||||||||||||||| ||| || |||| |||||||||||||  ||||||||||||    
T  28900960 tgaaaacagcttatgacattttctcgtaaggctttttcagcttattttcataagttct 28900903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 34464157 - 34464242
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 390  Q
    ||||| ||||||| || ||||| |||||  ||||| |||  ||  ||||||||||||||||||||||| |||||| |||| |||||    
T  34464157 ttgagtttatctattgacataaattttacaagactttttgggaggacttatgaaaacagcttatgacaattttcacaagctttttt 34464242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 351 - 459
Target Start/End: Complemental strand, 39280050 - 39279941
Alignment:
Q  351 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaa 449  Q
    ||||| ||||||||||||  || ||| ||||||| ||||||||||||  |||| |||||||| ||||||  |||| ||| || | |||| || ||||| |    
T  39280050 cttataaaaacagcttatagcattttacataagcttttttcagcttattttcaaaagttctccaagataatttatgaaatcagcctataacatatacaca 39279951  T
Q  450 aacaatttaa 459  Q
    ||||||||||    
T  39279950 aacaatttaa 39279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 425
Target Start/End: Original strand, 44989629 - 44989734
Alignment:
Q  321 gcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc-ctttttcagcttaaattcataagttctctaagata 419  Q
    ||||||||||| ||||||| |||  ||||||||||||||||| ||| ||||| | |||| ||||  |||| |||||||  ||||||| ||||  ||||||    
T  44989629 gcataagttttgtgagactgtttgggaaaacttatgaaaacaacttctgacattgttcacaagctgttttgcagcttattttcataatttctacaagata 44989728  T
Q  420 gcttat 425  Q
     |||||    
T  44989729 tcttat 44989734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 8e-39; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 306 - 459
Target Start/End: Complemental strand, 26771398 - 26771244
Alignment:
Q  306 tgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcata 405  Q
    ||||||||||||| |||||||||||| ||||||| |||  || |||||||||||||||||||||||| |||||| |||||||||||| ||||  ||||||    
T  26771398 tgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcata 26771299  T
Q  406 agttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 459  Q
    |||||||||| ||| |||||||||  | ||||||||| |||||||||||||||||    
T  26771298 agttctctaatatatcttataaaaaaagcttatagcatatacaaaaacaatttaa 26771244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 311 - 460
Target Start/End: Complemental strand, 38648479 - 38648329
Alignment:
Q  311 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 410  Q
    |||||||||| |||||||||| ||||||| |||  || | ||||||||||||||| |||||| || |||||||| ||||| ||| ||| |||||||||||    
T  38648479 ttatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataagcttttttaagcgtaatttcataagttc 38648380  T
Q  411 tctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 460  Q
    |  |||||||||||| ||||| ||| ||| || |||||||||||| |||||    
T  38648379 tacaagatagcttatgaaaacaactcataacatatacaaaaacaagttaat 38648329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 308 - 459
Target Start/End: Complemental strand, 18133787 - 18133635
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||||| | ||||||||| ||||||| |||  || | ||| ||||| |||||||| ||| |||||| |||| ||||||||||||  ||||||||    
T  18133787 agcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttattttcataag 18133688  T
Q  408 ttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 459  Q
    ||||| || |||| ||||||||||| ||||||| | |||||||| ||||||||    
T  18133687 ttctccaatatagtttataaaaccagcttataggatatacaaaagcaatttaa 18133635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 10758193 - 10758347
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||| ||||||| ||  |||||||||| ||||||| |||   | || ||||||||||||||||||||| |||||| |||| |||||||||||   |||||    
T  10758193 ttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttttttcagcttgttttcat 10758292  T
Q  405 aagttctctaagatagcttataaa-accacttatagcaaatacaaaaacaatttaa 459  Q
    |||||  |||| |||||||||||| || |||||||||| |||||||||||||||||    
T  10758293 aagtt-gctaatatagcttataaagacaacttatagcatatacaaaaacaatttaa 10758347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 27028965 - 27028810
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||| ||||||||||||||  ||||| | |||  || || || ||||||||||||| |||| |||||||||||  |||||||||||  |||||    
T  27028965 ttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttattttcat 27028866  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||| |||| |||||||||||| |||||  ||||||||| ||||| |||||||||||    
T  27028865 aagctctccaagatagcttatgaaaacagcttatagcatatacacaaacaatttaa 27028810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 305 - 429
Target Start/End: Complemental strand, 12976346 - 12976223
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||| ||| ||||||| |||   | ||||||||| |||||||| | ||| |||||| |||| ||||||||||| | |||||    
T  12976346 ttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagcttttttcagctt-atttcat 12976248  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    ||||||||||| |||||||||||||    
T  12976247 aagttctctaatatagcttataaaa 12976223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 35534549 - 35534702
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||  |||||||||| ||||||| |||  || ||||| |||||||||||||||||| |||| | |||| |||||| |||||  |||||    
T  35534549 ttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggcttactttcat 35534648  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || ||| ||||| ||||| || ||||  | |||||||||||||||||    
T  35534649 aagttctccaatataacttatgaaaacaacatata--acatacaaaaacaatttaa 35534702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 305 - 454
Target Start/End: Original strand, 30251390 - 30251540
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||||||  ||||||| |||  || |||||| |||||||||||||  || ||||||||||| |||| |||||||  |||||    
T  30251390 ttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagctttttacagcttattttcat 30251489  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaa 454  Q
    ||||  || |||||||||||| |||||  |||||| || |||||| |||||    
T  30251490 aagtggtccaagatagcttatgaaaacagcttataacatatacaataacaa 30251540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 31716163 - 31716283
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| |||||||  |||| ||||||| |||  || ||||| |||||||||||||||||| | ||||||||| ||||||||||||  |  ||    
T  31716163 ttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatttctat 31716262  T
Q  405 aagttctctaagatagcttat 425  Q
    || ||||| ||||||||||||    
T  31716263 aacttctccaagatagcttat 31716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 309 - 412
Target Start/End: Original strand, 35643928 - 35644031
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 408  Q
    |||||||||||||||||| |||| ||||||| |||  || |||||||||||| || |||||||| ||||||||||| ||||||| ||||  ||||||||     
T  35643928 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagc 35644027  T
Q  409 tctc 412  Q
    ||||    
T  35644028 tctc 35644031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 43045664 - 43045783
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||||| ||||||| ||| ||||||| |||| || | |||||||||||||||||  ||| |||| |||||| ||||||| ||||  ||||||||    
T  43045664 agcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagcttttttcaacttattttcataag 43045763  T
Q  408 ttctctaagatagcttataa 427  Q
    ||||| || |||| ||||||    
T  43045764 ttctccaatatagtttataa 43045783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 305 - 419
Target Start/End: Original strand, 1058013 - 1058126
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||  |||||||||| ||||||| |||  || ||||| ||||||| |||||||||| ||||||| ||  |||||| |||||  |||||    
T  1058013 ttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattag-ttttttccgcttattttcat 1058111  T
Q  405 aagttctctaagata 419  Q
    |||||||| ||||||    
T  1058112 aagttctccaagata 1058126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 349 - 460
Target Start/End: Original strand, 25930533 - 25930646
Alignment:
Q  349 aacttatgaaaacagctta-tgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac 446  Q
    |||||||||||| | |||| ||||||||||| ||||| ||||||||||||   ||| |||||||| |||||||||||| ||||| | ||| |||| ||||    
T  25930533 aacttatgaaaaaatcttaatgacacttttcgtaagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatatac 25930632  T
Q  447 aaaaacaatttaat 460  Q
    ||||||| ||||||    
T  25930633 aaaaacattttaat 25930646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 425
Target Start/End: Original strand, 35749505 - 35749626
Alignment:
Q  304 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 403  Q
    |||||||||||||| || ||||||||||  ||| || |||  || |||||||||||||||||| |  || ||||||||| | ||||||| | ||  ||||    
T  35749505 attgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatattttca 35749604  T
Q  404 taagttctctaagatagcttat 425  Q
    |||||||| |||||||||||||    
T  35749605 taagttctttaagatagcttat 35749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 8146419 - 8146362
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 406  Q
    ||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||||    
T  8146419 aacttatgaaaacagtttatgacacttttcataagttttttccagcttaatttcataa 8146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 28763498 - 28763417
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 390  Q
    ||||||||| |  |||||||||| ||||||| |||  || |||||||||||||||||||| ||| ||||||||||| |||||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttt 28763417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 459
Target Start/End: Original strand, 42043290 - 42043436
Alignment:
Q  304 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 403  Q
    ||||||||||| ||||| |||||||||||||||||| ||   || ||| |||| ||||||||||||| | ||||||||          ||||||   |||    
T  42043290 attgagcttatttactgtcataagttttatgagactgttcgggagaacatatggaaacagcttatgatatttttcata----------agcttattgtca 42043379  T
Q  404 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    | |||||||||||||||||||| ||||| ||||||| || || ||||||||||||||    
T  42043380 ttagttctctaagatagcttatgaaaacaacttatatcatatccaaaaacaatttaa 42043436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 457
Target Start/End: Complemental strand, 6882044 - 6881908
Alignment:
Q  322 cataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca-gcttaaattcataagttctctaagatag 420  Q
    |||||||||| ||||||| |||  || ||| ||||||||||||| |||| | |||| | |||| |||||   |||||  ||||||||||||| ||  |||    
T  6882044 cataagttttgtgagactgtttgggagaacctatgaaaacagctcatgataattttaacaagctttttttttgcttattttcataagttctccaatttag 6881945  T
Q  421 cttataaaaccacttatagcaaatacaaaaacaattt 457  Q
    ||||||||||  ||||||||| ||| |||||||||||    
T  6881944 cttataaaacagcttatagcatatataaaaacaattt 6881908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 36963290 - 36963374
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttt 389  Q
    ||||||| ||||||||||||||||||| ||||||| |||  || ||||||  |||||||||| ||||| |||||| |||| ||||    
T  36963290 ttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagcttttt 36963374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 1930164 - 1930049
Alignment:
Q  310 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 409  Q
    ||||||||||| |||||||||| ||| | | |||  || ||||| ||||||||| |||||||| | |||||||||  |||||||||||  |||| ||| |    
T  1930164 cttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggt 1930065  T
Q  410 ctctaagatagcttat 425  Q
    | | ||||||||||||    
T  1930064 caccaagatagcttat 1930049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 10120846 - 10120783
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 412  Q
    |||||||||||||||||||||||| || ||||| ||  |||||||||||  |||||||||||||    
T  10120846 aacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctc 10120783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 15180673 - 15180520
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| |||||||||| |||||||||||||||||| |||| || || || ||||||||| || ||||| |||||  |||  ||||| | ||||  ||||     
T  15180673 ttgagtttatctactgccataagttttatgagact-ttttggagaatttctgaaaacaggttttgacaattttc-caagtttttttaaacttattttcag 15180576  T
Q  405 aagttctctaagatagcttata-aaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || |||||||||| |||| ||||||| ||  |||||||| |||||||    
T  15180575 aagttctccaatatagcttatagaaacaacttataacatttacaaaaataatttaa 15180520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 16825518 - 16825628
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaataca 447  Q
    |||||||||||| ||||||||||| |||||||||| |||||||| ||||  |||||||||||   || ||||||| || |||| ||||||| |  | |||    
T  16825518 aacttatgaaaatagcttatgacaattttcataag-ctttttcaacttattttcataagttcggcaatatagcttgtagaaacaacttataacgtaaaca 16825616  T
Q  448 aaaacaatttaa 459  Q
    ||||||||||||    
T  16825617 aaaacaatttaa 16825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 457
Target Start/End: Original strand, 29168015 - 29168146
Alignment:
Q  327 gttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-t 425  Q
    ||||| ||||||| |||  || ||||||| ||||||| |||||||| |||||||||   ||| ||||||||  | ||||||||||| ||||||||| |      
T  29168015 gttttgtgagactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataagttctccaagatagctcagg 29168114  T
Q  426 aaaaccacttatagcaaatacaaaaacaattt 457  Q
    |||||  ||||||||| ||||||||| |||||    
T  29168115 aaaacagcttatagcatatacaaaaataattt 29168146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 29205897 - 29205787
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 447  Q
    ||||||| |||||||| ||||||| |||||||||| |||||| | | ||  ||||||| ||||| || |||| |||| ||||  |||||||||| |||||    
T  29205897 aacttattaaaacagcgtatgacatttttcataag-cttttttaacctactttcataaattctccaaaatagtttatgaaaataacttatagcatataca 29205799  T
Q  448 aaaacaatttaa 459  Q
    ||||||||||||    
T  29205798 aaaacaatttaa 29205787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 41589720 - 41589641
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 384  Q
    |||||||| ||||||| |||||| ||| ||||||| |||| || |||||||||||||| ||||| ||| |||||| ||||    
T  41589720 ttgagcttgtctactgacataagctttttgagactgttttggagaacttatgaaaacaacttataacaattttcaaaagc 41589641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 20672809 - 20672735
Alignment:
Q  90 taagttgtttttagcttattttcataaagtcttcacaatagcttataaaa-cagtttgactttattttatttttt 163  Q
    |||| |||||| |||||||||||||||  ||| ||  ||||||||||||| ||||||||||||||||||| ||||    
T  20672809 taagctgttttcagcttattttcataagctctccaggatagcttataaaaacagtttgactttattttatctttt 20672735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 37945686 - 37945576
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 448  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||| |  || ||||||||||||| ||  ||||||| ||||||    
T  37945686 aacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaacaactatagcatatacaa 37945587  T
Q  449 aaacaatttaa 459  Q
    ||  |||||||    
T  37945586 aattaatttaa 37945576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 40859719 - 40859796
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataag 383  Q
    |||||||||||| ||  |||||||||| |||| || |||| || | |||||||||||||||||||||| ||||||||||    
T  40859719 ttgagcttatctgctaacataagttttgtgaggctgttttggaga-cttatgaaaacagcttatgacaattttcataag 40859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 43717870 - 43717993
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttat---gacacttttcataagcctttttcagcttaaatt 401  Q
    ||||||||||||| || |||||||||| ||||||| |||  || |||||||||||||||  |||   ||||    ||||||||  |||| ||||||  ||    
T  43717870 ttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacagactatgaggacatcgctcataagctgtttttagcttacttt 43717969  T
Q  402 cataagttctctaagatagcttat 425  Q
    ||||||||||| ||||||||||||    
T  43717970 cataagttctccaagatagcttat 43717993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 32840922 - 32841014
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 397  Q
    |||||||||||||||  || |||||||  |||||| |||  || |||||||||||||| ||||||||| | ||||||||   |||||||||||    
T  32840922 ttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagctta 32841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 429
Target Start/End: Complemental strand, 16347279 - 16347200
Alignment:
Q  351 cttatgaaaacagctta-tgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    ||||||||||||  ||| ||||||||||||||||| || ||||||||||  ||||||||||   ||||||| ||||||||    
T  16347279 cttatgaaaacaagttaatgacacttttcataagctttattcagcttaatatcataagttcaacaagatagtttataaaa 16347200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 9130255 - 9130289
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagact 339  Q
    ||||||||||||||||||||||||||| |||||||    
T  9130255 ttgagcttatctactggcataagttttgtgagact 9130289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 349 - 438
Target Start/End: Original strand, 9956794 - 9956884
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttata 438  Q
    |||||||||||| || ||||| || | ||||||||   |||||||||||  ||||||||||||| ||||||| |||| ||||| |||||||    
T  9956794 aacttatgaaaatagtttatggcattgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttata 9956884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 1e-34; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 17822801 - 17822956
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||||| | ||||||| |||  || ||| |||||||||||||||||||| ||||||||||| ||||| ||||||  |||||    
T  17822801 ttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctttttttagcttattttcat 17822900  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| |||||||||||| ||||| |||||||||| ||| || ||||||||||    
T  17822901 aagttctccaagatagcttatgaaaacaacttatagcatataaaataacaatttaa 17822956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 305 - 454
Target Start/End: Original strand, 21731592 - 21731742
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||| ||||||||| |||||||||| ||||| | |||  || |||||||||||||||||||| ||| ||||||||| | ||||||| ||||  |||||    
T  21731592 ttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaacttttttcaacttactttcat 21731691  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaa 454  Q
    || ||||| || ||||||||| ||||| |||||||||| ||||||||||||    
T  21731692 aaattctccaatatagcttataaaaacaacttatagcacatacaaaaacaa 21731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 305 - 429
Target Start/End: Complemental strand, 54426177 - 54426053
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||||||||||||||| |||||||  ||  || |||||| ||||||||||||||||| ||||||||||| |||||||  |||  |||||    
T  54426177 ttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagcttttttcaagttattttcat 54426078  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    |||||||| || |||| ||||||||    
T  54426077 aagttctccaatatagattataaaa 54426053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 315 - 459
Target Start/End: Original strand, 50681035 - 50681180
Alignment:
Q  315 ctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctcta 414  Q
    ||||| || |||||||| ||||||| |||  || ||||||||||||||| | |||||| ||||||||||| |||||||  |||  ||||||| ||||| |    
T  50681035 ctactcgcttaagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctcca 50681134  T
Q  415 agatagcttata-aaaccacttatagcaaatacaaaaacaatttaa 459  Q
    | |||||||||| |||| |||||||||| |||||||||||||||||    
T  50681135 atatagcttatataaacaacttatagcatatacaaaaacaatttaa 50681180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 321 - 429
Target Start/End: Original strand, 30668320 - 30668426
Alignment:
Q  321 gcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatag 420  Q
    ||||||||||| ||||||| |||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||  | || |||||||    
T  30668320 gcataagttttttgagact-ttttggagaacttgtgaaaacagcttatgacacttttcataag-ctttttcagcttaatttcataaactatccaagatag 30668417  T
Q  421 cttataaaa 429  Q
    |||||||||    
T  30668418 cttataaaa 30668426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 311 - 448
Target Start/End: Original strand, 50662680 - 50662818
Alignment:
Q  311 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 410  Q
    ||||||||  || ||||||||||||||||||||  || ||||||||||||||| | |||||| ||||||||||| ||||||| ||||  |||| || |||    
T  50662680 ttatctacccgcttaagttttatgagactctttaagagaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttc 50662779  T
Q  411 tctaagatagcttata-aaaccacttatagcaaatacaa 448  Q
    || || |||||||||| |||| |||||||||| ||||||    
T  50662780 tccaatatagcttatataaacaacttatagcatatacaa 50662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 26801 - 26924
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||| ||||||||||| ||| | ||||| ||| ||| || |||||||||||||||||||||  ||||| ||| ||||||||| |||  |||||    
T  26801 ttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaag-ctttttcagattattttcat 26899  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    |||||||| || |||||||||||||    
T  26900 aagttctccaatatagcttataaaa 26924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 308 - 423
Target Start/End: Original strand, 13126515 - 13126630
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||| |||||  |||||||||| ||||||| |||   | ||||||| |||||||||||||||| || |||||||| ||||||||||||  ||||||||    
T  13126515 agcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataag 13126614  T
Q  408 ttctctaagatagctt 423  Q
    ||||| ||||||||||    
T  13126615 ttctcgaagatagctt 13126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 305 - 451
Target Start/End: Complemental strand, 22030337 - 22030190
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||| |||| | ||||||||||| |||| || |||  || |||||||||||||||||||||||| |||||| |||| ||| |||| |||  |||||    
T  22030337 ttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcaggttattttcat 22030238  T
Q  405 aagttctctaagatagcttataa-aaccacttatagcaaatacaaaaa 451  Q
    |||||||||||  || ||| ||| ||| |||||||||| |||||||||    
T  22030237 aagttctctaatttaacttgtaagaacaacttatagcatatacaaaaa 22030190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 309 - 459
Target Start/End: Original strand, 53294054 - 53294205
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 408  Q
    |||||||||||| ||| |||||| | ||||| |||  ||||||| |||||||||  ||||||   |||||| ||||  ||||||||||   |||||||||    
T  53294054 gcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaagctattttcagcttgttttcataagt 53294153  T
Q  409 tctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||| |||| |||| ||||| |||||||||| |||||||||||||||||    
T  53294154 tctctaatatagtttataaaaacaacttatagcatatacaaaaacaatttaa 53294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 349 - 430
Target Start/End: Complemental strand, 29657474 - 29657393
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaac 430  Q
    |||||||||||||||||||||||| |||||| |||| ||||| ||||||| ||||||| |||||||| ||||||| ||||||    
T  29657474 aacttatgaaaacagcttatgacaattttcaaaagcatttttgagcttaatttcataacttctctaatatagcttgtaaaac 29657393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 308 - 425
Target Start/End: Complemental strand, 55302380 - 55302263
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||| ||||||||||||| |||| || ||   ||||||||||  ||||||||||||||| ||||| ||||| ||||||||||||  ||||||||    
T  55302380 agcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagcttattttcataag 55302281  T
Q  408 ttctctaagatagcttat 425  Q
    || || || |||||||||    
T  55302280 ttttccaacatagcttat 55302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 311 - 423
Target Start/End: Complemental strand, 24169391 - 24169279
Alignment:
Q  311 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 410  Q
    ||||||||||||||||||||| ||||||| |||  || ||||| | |||| ||||||||||| ||||||||||  ||||||| ||||  |||||||| ||    
T  24169391 ttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaacttattttcataagctc 24169292  T
Q  411 tctaagatagctt 423  Q
    || ||||||||||    
T  24169291 tccaagatagctt 24169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 311 - 454
Target Start/End: Complemental strand, 2244179 - 2244032
Alignment:
Q  311 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 410  Q
    |||||||||| |||||||||| ||| ||| |||  || || || | |||||||||||||||| | ||||||| | ||||||| ||||  |||||||||||    
T  2244179 ttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaacttttttcaccttattttcataagttc 2244080  T
Q  411 tctaagatagctta---taaaaccacttatagca-aatacaaaaacaa 454  Q
    || || ||||||||   |||||| |||||||||| |||||||||||||    
T  2244079 tccaatatagcttatattaaaacaacttatagcataatacaaaaacaa 2244032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 305 - 426
Target Start/End: Original strand, 25904159 - 25904280
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||| | || ||||| |||| ||||||| |||  || | ||||||||||||||||||| || ||||||||||| ||||||||||||  || ||    
T  25904159 ttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagcttatttttat 25904258  T
Q  405 aagttctctaagatagcttata 426  Q
    |||||||| || | ||||||||    
T  25904259 aagttctccaaaacagcttata 25904280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 355 - 451
Target Start/End: Original strand, 55414406 - 55414503
Alignment:
Q  355 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 451  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||||| |||||| ||||| ||||| | |||||||| || ||||||    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaa 55414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 352 - 457
Target Start/End: Original strand, 7839344 - 7839450
Alignment:
Q  352 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 450  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||||  ||| ||||||||  ||  |||||||| ||||| | |||||||| ||||||||    
T  7839344 ttatgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatatacaaaa 7839443  T
Q  451 acaattt 457  Q
    |||||||    
T  7839444 acaattt 7839450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 39603107 - 39603230
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||| |||| ||| ||||||||| ||||||| |||  || |||||| ||||||||||||||||| |||| |||||| ||||| |  |||  |||||    
T  39603107 ttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagctttttttaagttattttcat 39603205  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    |||||||| || ||| |||||||||    
T  39603206 aagttctccaatataccttataaaa 39603230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 305 - 455
Target Start/End: Original strand, 35571567 - 35571718
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||||||| || ||   |||  || ||||| | |||||||||||| ||||| ||||| |||   ||||| ||||  ||||     
T  35571567 ttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctggtttcaacttattttcac 35571666  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 455  Q
    ||||||||||||||||||||| |||||  ||||||||  |||| ||||||||    
T  35571667 aagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 30668012 - 30668099
Alignment:
Q  81 acatatccctaagttgtttttagcttattttcataaagtcttcacaatagcttat-aaaacagtttgactttattttattttttagtgtagaaataac 177  Q
    |||||||||||||||||||||||||||||||||||          | |||||||| || |||||||| |||||||||||||||| |||||||||||||    
T  30668012 acatatccctaagttgtttttagcttattttcata----------agtagcttatgaagacagtttggctttattttattttttggtgtagaaataac 30668099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 451
Target Start/End: Original strand, 46588053 - 46588157
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat--aaaaccacttatagcaaatac 446  Q
    |||||| ||||| | ||||||||| |||||||||||||||| || ||||  ||||||||||||| || ||| |||||  ||||| |||||||||| |||     
T  46588053 aacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttatagcatatat 46588152  T
Q  447 aaaaa 451  Q
    |||||    
T  46588153 aaaaa 46588157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 49939890 - 49939979
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 397  Q
    |||||||||||| ||||||| ||| ||||||| |||   | |||||||||||| ||||||||||| | |||||||||  |||||||||||    
T  49939890 agcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacattgttcataagctgttttcagctta 49939979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 15173239 - 15173326
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 392  Q
    |||| ||||||||||| |||||||||| ||||||| |||  || |  ||||||||| ||||||||||| ||||||||||  |||||||    
T  15173239 ttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagtttttttca 15173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 379 - 453
Target Start/End: Original strand, 16199991 - 16200066
Alignment:
Q  379 ataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaaca 453  Q
    |||||||||||| ||||||  ||||||||| ||| |||||||||||| |||||  ||||||||| |||||||||||    
T  16199991 ataagccttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaaca 16200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 459
Target Start/End: Complemental strand, 25332891 - 25332753
Alignment:
Q  323 ataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct-ctaagatagc 421  Q
    ||||||||| ||||||| |||  || |||||  ||||||| |||||| || | ||||||||   |||||||||||  ||||||||||||  |||||||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataagttctgataagatagc 25332792  T
Q  422 ttataaaacca-cttatagcaaatacaaaaacaatttaa 459  Q
    ||||||||  | |||| |||  |||||||||||||||||    
T  25332791 ttataaaaatagcttagagcttatacaaaaacaatttaa 25332753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 437100 - 437169
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacact 374  Q
    |||||| |||||| | |||||| |||| ||||||| |||  ||||||||||||||||| |||||||||||    
T  437100 ttgagcatatctagtagcataacttttgtgagactatttgggaaaacttatgaaaacaacttatgacact 437169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 41512730 - 41512633
Alignment:
Q  360 acagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    ||||||||| ||||||||||||||| ||| ||| ||||  ||||||||||||   ||| ||||||| ||||| |||||||||| |  |||||||||||    
T  41512730 acagcttataacacttttcataagcttttatcatcttattttcataagttcttccagaaagcttatgaaaacaacttatagcatacgcaaaaacaatt 41512633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 46592204 - 46592269
Alignment:
Q  364 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    ||||||||| |||||||||||||||| || ||||  ||||||||||||| || ||| |||||||||    
T  46592204 cttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaa 46592269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 1706756 - 1706636
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| |||||||||| |||||||||| ||||||  |||  || || |||||||||||||||||| || | |||||||||  ||| || ||||  |||||    
T  1706756 ttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttcat 1706657  T
Q  405 aagttctctaagatagcttat 425  Q
    ||| | || ||||||| ||||    
T  1706656 aagctgtccaagatagtttat 1706636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 21523644 - 21523585
Alignment:
Q  352 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 412  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||||  ||||||| |||||    
T  21523644 ttatgaaaacaacttatgacatttttcataag-ctttttcagcttattttcataacttctc 21523585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 41336850 - 41336802
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 397  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  41336850 aacttaagaaaacagcttatgacagttttcataagcttttttcaactta 41336802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 372
Target Start/End: Complemental strand, 52172859 - 52172791
Alignment:
Q  305 ttgagcttatctactggcataagt-tttatgagactcttttcgaaaacttatgaaaacagcttatgaca 372  Q
    |||||||||  ||||||||||||| ||| ||||||| ||   |||||||||||||||||||||||||||    
T  52172859 ttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagcttatgaca 52172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 457
Target Start/End: Complemental strand, 2996660 - 2996554
Alignment:
Q  351 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 449  Q
    |||||||||||| ||||||||| | | ||||||| ||||||| ||||  |||||| | |||| |||||||||||| ||||| ||||||| |  ||| |||    
T  2996660 cttatgaaaacaacttatgaca-tgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaa 2996562  T
Q  450 aacaattt 457  Q
    ||||||||    
T  2996561 aacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 30668248 - 30668303
Alignment:
Q  231 ggctatgcaattagaattttaatccaaaggtacaattacaatgcttaaagaaacta 286  Q
    ||||||||||||| ||||| ||||||||||||||||||| |   ||||||||||||    
T  30668248 ggctatgcaattaaaatttcaatccaaaggtacaattactacagttaaagaaacta 30668303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 1408040 - 1407970
Alignment:
Q  356 gaaaacagcttatgacacttttcataagc-ctttttcagcttaaattcataagttctctaagatagcttat 425  Q
    ||||||||||||||||| |||||||||||  ||||||||||||  ||||||| || ||  |||||||||||    
T  1408040 gaaaacagcttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagcttat 1407970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 18011924 - 18011874
Alignment:
Q  96 gtttttagcttattttcataaagtcttcacaatagcttat-aaaacagttt 145  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||||||||||    
T  18011924 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagttt 18011874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 37863935 - 37864043
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 448  Q
    |||||||||||||||||||||||||  ||||||||   |||||| ||| |||||||||  || | |||||||||||| ||||  |||||| |  | ||||    
T  37863935 aacttatgaaaacagcttatgacac-gttcataagttgttttcacctt-aattcataacctcaccaagatagcttatgaaacagcttatatcttaaacaa 37864032  T
Q  449 aaacaatttaa 459  Q
    |||||||||||    
T  37864033 aaacaatttaa 37864043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 349 - 419
Target Start/End: Complemental strand, 55064925 - 55064855
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 419  Q
    ||||| |||||||| ||||||||| ||||||  ||| ||||||| ||||  ||||||||||||| ||||||    
T  55064925 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaagata 55064855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 459
Target Start/End: Original strand, 54069403 - 54069508
Alignment:
Q  355 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccac-ttatagcaaatacaaaaaca 453  Q
    |||||||||||||  ||| |||||||||||  |||| | ||||  |||||| |||||  || ||| ||||||||| ||  |||||||| |||||||||||    
T  54069403 tgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaaca 54069502  T
Q  454 atttaa 459  Q
    ||||||    
T  54069503 atttaa 54069508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 55547055 - 55547112
Alignment:
Q  90 taagttgtttttagcttattttcataaagtcttcacaatagcttat-aaaacagtttg 146  Q
    ||||||||||||||||||||| |||||| | ||||  ||||||||| |||||||||||    
T  55547055 taagttgtttttagcttatttccataaacttttcagcatagcttatgaaaacagtttg 55547112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 3e-32; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 16937819 - 16937974
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||||||| ||||| | |||   | ||||||||||||||||||||||||  |||||||||| ||||||||||||  ||| |    
T  16937819 ttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagcttttttcagcttattttcct 16937918  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || ||||| ||| ||||| |||||||||| |||||||||||||||||    
T  16937919 aagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaa 16937974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 16457935 - 16458070
Alignment:
Q  325 aagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 424  Q
    ||||||| ||||||| |||  || |||||||||||||||||||||||| |||||||||||  ||||||| |||  |||| |||||||| ||  ||||| |    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctca 16458034  T
Q  425 t-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    | ||||| |||||||||| |||||||||||||||||    
T  16458035 taaaaacaacttatagcatatacaaaaacaatttaa 16458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 305 - 460
Target Start/End: Complemental strand, 10640087 - 10639931
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| |||||||||| |||||||||| ||| | | |||  || |||||||||||||||||||||||| ||||||||||| ||||  ||||||  |||||    
T  10640087 ttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctttttctagcttattttcat 10639988  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 460  Q
    |||||||| || |||| ||||  |||| ||| ||  || ||||||||||||||||||    
T  10639987 aagttctccaaaatagtttatgtaaacaactcatcacatatacaaaaacaatttaat 10639931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 39105599 - 39105443
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaa-aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 403  Q
    ||||| |||||||  || ||||||||||||||||| |||| | | || ||||||||||||||||||||| | |||||||||  |||| ||||||  ||||    
T  39105599 ttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttca 39105500  T
Q  404 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||||| |||||||||||| |||||   |||||||  |||| ||||||||||||    
T  39105499 taagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaa 39105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 305 - 451
Target Start/End: Complemental strand, 43301012 - 43300865
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| || ||||||||||||||||||||| ||   || || |||| |||||||| ||||||| |||  |||||| | ||||||||||  |||||    
T  43301012 ttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttatataagcatgtttcagcttattttcat 43300913  T
Q  405 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaa 451  Q
    |||||||| |||||||||||  ||||| |||||||| | |||||||||    
T  43300912 aagttctccaagatagcttacaaaaacaacttataggatatacaaaaa 43300865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 9202684 - 9202804
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||| |||||||||||||| | ||||| |||  ||||||| ||| ||||||||||||||| | |||||||||  ||| |||||||  |||||    
T  9202684 ttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttccagcttattttcat 9202783  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||  |||||| |||||    
T  9202784 aagttcttcaagataacttat 9202804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 309 - 459
Target Start/End: Complemental strand, 29925970 - 29925820
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 408  Q
    ||||||||||| ||| ||||||| ||||||  |||  || |||||||||||||||||||||||| | |||||  |  ||||||| ||||  |||||||||    
T  29925970 gcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagt 29925872  T
Q  409 tctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||| || |||||||||  |||| |||||||||| ||||| |||||||||||    
T  29925871 tctccaatatagcttatgtaaacaacttatagcacatacagaaacaatttaa 29925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 305 - 458
Target Start/End: Complemental strand, 40426899 - 40426745
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| || ||||| |||| ||||||| |||  |    ||||||||||||||||||| || ||||||||||| ||||| ||||||  ||| |    
T  40426899 ttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagcttattttcgt 40426800  T
Q  405 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattta 458  Q
    |||||||| |||| ||||||   ||||  |||| |||||||||||||||||||||    
T  40426799 aagttctccaagacagcttacggaaacagcttacagcaaatacaaaaacaattta 40426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 31038418 - 31038333
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 390  Q
    |||||||||||||| |||||||||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  31038418 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31038333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 31047642 - 31047557
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 390  Q
    |||||||||||||| |||||||||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  31047642 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31047557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 7705934 - 7706054
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||| |||||||| ||||||||||| |||  ||||||  || |||||||||||||||||||||||| ||||||   || |||||| |||||  ||||     
T  7705934 ttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgcttttttcggcttattttcac 7706033  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||| || |||||||||    
T  7706034 aagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 7985103 - 7984983
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||||||||||||||| ||| ||||||| |||  || | |||| ||||||||||| ||||  | |||||||||  |||||||||||  |||||    
T  7985103 ttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcat 7985004  T
Q  405 aagttctctaagatagcttat 425  Q
    || ||||| ||||||||||||    
T  7985003 aaattctccaagatagcttat 7984983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 12857274 - 12857398
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| || | |||||||| ||| ||| ||   || |||||||||||||| ||||||||| |||||| |||| ||||||||||||  ||  |    
T  12857274 ttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcacaagcttttttcagcttatttttgt 12857373  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    |||||||| || |||||||||||||    
T  12857374 aagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 349 - 429
Target Start/End: Original strand, 12857685 - 12857765
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    |||||||||||||| ||||||||| |||||| || | ||||||||||||  ||||||||||||| || |||||||||||||    
T  12857685 aacttatgaaaacaacttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 310 - 426
Target Start/End: Original strand, 42500184 - 42500298
Alignment:
Q  310 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 409  Q
    |||| |||||| |||||||||| |||||||| ||| || |||||||| ||||| |||| |||| |||||||||| |||||||| ||||  ||||||||||    
T  42500184 cttacctactgacataagttttgtgagactc-tttggagaacttatggaaacaacttacgacaattttcataag-ctttttcaacttattttcataagtt 42500281  T
Q  410 ctctaagatagcttata 426  Q
    ||| || ||||||||||    
T  42500282 ctccaatatagcttata 42500298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 324 - 456
Target Start/End: Complemental strand, 32009808 - 32009674
Alignment:
Q  324 taagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcat-aagcctttttcagcttaaattcataagttctctaagatagct 422  Q
    |||||||| ||||||| |||   |||||||||||||||||||| ||||| ||||||| |||| ||||| | |||   ||||||||||||| || ||||||    
T  32009808 taagttttgtgagactatttggaaaaacttatgaaaacagcttgtgacaattttcataaagcttttttgaacttgttttcataagttctccaatatagct 32009709  T
Q  423 tat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    ||| ||||| | |||||||| |||||| |||||||    
T  32009708 tataaaaacaatttatagcatatacaagaacaatt 32009674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 3735138 - 3735202
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctct 413  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||||||||  ||||||||||||||    
T  3735138 aactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctct 3735202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 305 - 424
Target Start/End: Original strand, 35445780 - 35445898
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| |||||||||| |||||||||| |||||||||||   | || ||||||||||||||||| ||| | ||||| || | |||||| ||||  |||||    
T  35445780 ttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca-tgttcattaggcattttcaccttattttcat 35445878  T
Q  405 aagttctctaagatagctta 424  Q
    || ||||| |||||||||||    
T  35445879 aaattctccaagatagctta 35445898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 19460330 - 19460442
Alignment:
Q  312 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 411  Q
    |||||||||||||||||||  ||||||| |||  || ||||| || ||||| ||||||| | |||||||||| || ||||||||||  ||||||||||||    
T  19460330 tatctactggcataagtttagtgagactgtttaggagaacttttggaaacaacttatgatatttttcataag-ctgtttcagcttattttcataagttct 19460428  T
Q  412 ctaagatagcttat 425  Q
      |||||| |||||    
T  19460429 tgaagataacttat 19460442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 901 - 990
Target Start/End: Complemental strand, 37606092 - 37605999
Alignment:
Q  901 caggaatgataagtaaacacaa-aatacaaacacaaa-atgacaccatacact-atactc-atacttatatattttcctttttccttattcctt 990  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||| |||||||| | ||||| |||||| || ||||||    
T  37606092 caggaatgataagtaaacacaataatacaaacacaaatatgacaccatacactgttactcaatacttatgttttttcttttttcttttttcctt 37605999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 37954773 - 37954696
Alignment:
Q  352 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    ||||||||||||||||||| | ||||||| ||| ||||||| ||||  |||||| |||||| || |||||||||||||    
T  37954773 ttatgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaa 37954696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 15246967 - 15246847
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||||||||| ||| | |||  || ||||||||||| || |||||||||   ||||||||  |||| || ||||  || ||    
T  15246967 ttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttatttttat 15246868  T
Q  405 aagttctctaagatagcttat 425  Q
     | ||||||||||||||||||    
T  15246867 catttctctaagatagcttat 15246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 440
Target Start/End: Original strand, 1465000 - 1465091
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagc 440  Q
    ||||||||||||||||||||| || |  |||||||   |||||||||||  |||| |||| ||| ||||||||||||||||  |||||||||    
T  1465000 aacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttcacaagtcctccaagatagcttataaaataacttatagc 1465091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 25461169 - 25461074
Alignment:
Q  361 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 455  Q
    ||||||||| || ||||||||| | ||||||||||||  ||||| ||||||| || | ||||||| ||||| ||||||| || |||||||||||||    
T  25461169 cagcttatggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatacaaaaacaat 25461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 305 - 438
Target Start/End: Complemental strand, 11700296 - 11700163
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||| ||||||||||||||| ||||||| |||   | |||||||| ||||| ||||||||| | |||||||   | ||||| ||||  |||||    
T  11700296 ttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataa-attgtttcatcttattttcat 11700198  T
Q  405 aagttctctaagatagcttat-aaaaccacttata 438  Q
    |||||||| | |||||| ||| ||||| |||||||    
T  11700197 aagttctccacgatagcatatcaaaacaacttata 11700163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 2568747 - 2568636
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac- 446  Q
    |||||||||||||||||||||||| | ||||||||   |||| ||||||  ||||| || |||| | |||||||||| ||||| |||||||||  ||||     
T  2568747 aacttatgaaaacagcttatgaca-tattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacg 2568649  T
Q  447 aaaaacaatttaa 459  Q
    |||||||||||||    
T  2568648 aaaaacaatttaa 2568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 429
Target Start/End: Complemental strand, 9107224 - 9107100
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||||| || |||||||||| ||||| | |||  || |||| |||||||||||||| |||| |||||| || | |||||| ||| |  |||||    
T  9107224 ttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaacttttttctgctaattttcat 9107125  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    |||||||| || ||| |||| ||||    
T  9107124 aagttctccaatataacttacaaaa 9107100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 22209760 - 22209796
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactct 341  Q
    ||||||||||||||||||||||||||| |||||||||    
T  22209760 ttgagcttatctactggcataagttttctgagactct 22209796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 34669709 - 34669773
Alignment:
Q  349 aacttatgaaaac-agcttatgacacttttcataagcctttttcagcttaaattcataagttctc 412  Q
    ||||||||||||| | || |||||| ||||||||||| ||||||||||||| |||| ||||||||    
T  34669709 aacttatgaaaactaactaatgacatttttcataagcttttttcagcttaatttcagaagttctc 34669773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 35446138 - 35446082
Alignment:
Q  356 gaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 412  Q
    |||||||| |||||||| ||||| ||||| ||||||||||||  |||||||||||||    
T  35446138 gaaaacagtttatgacatttttcgtaagcttttttcagcttattttcataagttctc 35446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 36797032 - 36797124
Alignment:
Q  306 tgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagc-ttatgacacttttcataagcctttttcagctta 397  Q
    ||||||| |||||||| || |||||||||||| | |||| || ||||||| |||||| | || ||||| ||||||||||| |||||| |||||    
T  36797032 tgagcttctctactggtattagttttatgagaatgttttggagaacttataaaaacaactttctgacaattttcataagcttttttcggctta 36797124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 3520711 - 3520632
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 384  Q
    ||||||| ||||||| | ||||||| | ||||||| |||  || |||||||||||||| ||||||||  |||||||||||    
T  3520711 ttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatgacttttttcataagc 3520632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 412
Target Start/End: Original strand, 3932612 - 3932719
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||    |||||| ||| ||||||| |||  ||||||||   |||||||||||||| | ||||||||||| |||| |||||||  ||| |    
T  3932612 ttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcataagctttttacagcttattttcgt 3932711  T
Q  405 aagttctc 412  Q
    ||||||||    
T  3932712 aagttctc 3932719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 4014426 - 4014480
Alignment:
Q  371 cacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 425  Q
    |||| |||||||||  |||||||||||  ||||||||||||| ||||||||||||    
T  4014426 cactgttcataagctgttttcagcttattttcataagttctccaagatagcttat 4014480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 12521587 - 12521518
Alignment:
Q  90 taagttgtttttagcttattttcataaagtcttcacaatagcttat--aaaacagtttgactttatttta 157  Q
    |||| |||||| ||||||||| |||||  |||||| ||||||||||  |||||||||||||| |||||||    
T  12521587 taagctgttttcagcttatttccataagctcttcaaaatagcttatacaaaacagtttgactctatttta 12521518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 39477967 - 39477893
Alignment:
Q  355 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    |||| |||||| |||||| |||||| |||  |||||| |||||  |||| ||||||||||| |||||||||||||    
T  39477967 tgaacacagctgatgacaattttcaaaagtttttttctgcttattttcagaagttctctaacatagcttataaaa 39477893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 382
Target Start/End: Original strand, 2973524 - 2973557
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataa 382  Q
    |||||||||||||||||||||||| |||||||||    
T  2973524 aacttatgaaaacagcttatgacaattttcataa 2973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 3e-32; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 305 - 451
Target Start/End: Original strand, 18405767 - 18405914
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||||||| ||||||| ||| | | ||||||||||||||| | | |||||||||||||| | ||||  ||||||| |||||    
T  18405767 ttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatttcat 18405866  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 451  Q
    |||||||| |||||||||||| ||||| |||||||||| |||||||||    
T  18405867 aagttctccaagatagcttatgaaaacaacttatagcatatacaaaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 39980863 - 39980708
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||||||| ||||||| |||  || |||||||||||||||||||||||   |||||||||| ||||||| ||||  |||||    
T  39980863 ttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttcaacttattttcat 39980764  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || ||||||||| ||||| ||||||||||  | ||||||||||||||    
T  39980763 aagttctccaatatagcttataaaaacaacttatagcatgttcaaaaacaatttaa 39980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 20880610 - 20880455
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||||||  | ||||| |||  || ||| |||||||||||||||||||| ||||||||||| ||||| ||||||  |||||    
T  20880610 ttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttttttgagcttattttcat 20880511  T
Q  405 aagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || ||||||| ||||| ||  |||||||| |||||||||||||||||    
T  20880510 aagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaa 20880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 30444027 - 30443872
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||||||||| |||  ||||||| |||   | | |||||||||||||||||||||| |||||| |||| ||||||||||||  |||||    
T  30444027 ttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttcat 30443928  T
Q  405 aagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || |||| |||||||| || ||||||||| |||||||| ||||||||    
T  30443927 aagttctccaatatagtttataaaaacagcttatagcatatacaaaagcaatttaa 30443872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 312 - 460
Target Start/End: Original strand, 53789406 - 53789553
Alignment:
Q  312 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 411  Q
    ||||||||| |||||||||| |||||||  ||  || ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  53789406 tatctactgacataagttttgtgagact--ttgagagaacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataagttct 53789503  T
Q  412 ctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 460  Q
    | | |||||||||| | ||| |||||||||| |||| |||||| ||||||    
T  53789504 ccatgatagcttatgataacaacttatagcatataccaaaacattttaat 53789553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 24085274 - 24085398
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||| |||||||||||| |||||||  ||| || |||||||||||||||||||||  ||| |||||| ||  |||||||||||  ||||     
T  24085274 ttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgttttcagcttattttcac 24085373  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    |||||||| ||||||||||| ||||    
T  24085374 aagttctccaagatagcttacaaaa 24085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 584180 - 584025
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||||| | ||||||| |||| || || |||||||||||||||| | || |||||||| |  | ||| ||||||| |||||    
T  584180 ttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttctttaagcttaatttcat 584081  T
Q  405 aagttctctaagatagcttataaaac-cacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||  |||||||||||| ||||  ||||||||||   |||||||||||||||    
T  584080 aagttcttcaagatagcttatgaaactaacttatagcatgaacaaaaacaatttaa 584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 21367801 - 21367646
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||||||  ||||||||||| || |||| |||  || |||||||||||||||||||||||| | |||| ||||  |||||||||||  |||||    
T  21367801 ttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcat 21367702  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| |||||||||||| ||||| |||||||    |||| ||||||||||||    
T  21367701 aagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaa 21367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 31365124 - 31365211
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 392  Q
    ||||||||||||| ||||||||||||| ||||||| |||  || ||||||||||| |||||||||||| ||||||||||| |||||||    
T  31365124 ttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttca 31365211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 36631031 - 36631142
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 447  Q
    ||||||||||| |||||||||||  |||||| |||| |||||| |||||  ||||||||||||| || |||||| || ||||| ||||||||||  ||||    
T  36631031 aacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtaca 36631130  T
Q  448 aaaacaatttaa 459  Q
    ||||||||||||    
T  36631131 aaaacaatttaa 36631142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 3845499 - 3845618
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||||||||||||||| ||||||| |||   | ||| | |||| |||| |||||||| |||| |||| | ||||||||||||  |||||    
T  3845499 ttgagcttatctactggcataagttttgtgagactgtttgatagaacatctgaagacagattatgaca-tttttataatcttttttcagcttattttcat 3845597  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||| |||||| |||||    
T  3845598 aagttctccaagataacttat 3845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 46031124 - 46031004
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||||| ||  ||||||||||||||||| |||  || |||||| ||||||||| ||||||| | |||||||||  |||||||||||  || ||    
T  46031124 ttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagcttattttaat 46031025  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||| ||||||| ||||    
T  46031024 aagttctccaagatagtttat 46031004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 459
Target Start/End: Original strand, 402526 - 402633
Alignment:
Q  353 tatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaa 451  Q
    |||||||||||||||||||| | |||||||||  |||||||||||| |||| |||||||  ||||||| |||||||| || |||||| |  |||| ||||    
T  402526 tatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaa 402625  T
Q  452 caatttaa 459  Q
    ||||||||    
T  402626 caatttaa 402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 346 - 429
Target Start/End: Complemental strand, 902017 - 901934
Alignment:
Q  346 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 429  Q
    |||||||||||||||||||| || ||| ||| ||||||| ||||||| ||||  ||||||||||||| || |||||||||||||    
T  902017 gaaaacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataagttctccaatatagcttataaaa 901934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 46778127 - 46778281
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| || |||||||| |||| ||| ||  |||  || |||||||||||||| ||||||||| ||||||||||  || |||||||| | |||||    
T  46778127 ttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagctt-atttcat 46778225  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| || ||||||| |||| |||||   |||||||| | |||||||||||||||    
T  46778226 aagttgtccaagatagtttatgaaaacagtttatagcataaacaaaaacaatttaa 46778281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 34610742 - 34610862
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||||||| |   ||| |||  || ||||||||||||| |||||||||| | ||||||||   ||||||||| |  |||||    
T  34610742 ttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacattgttcataagtggttttcagctgattttcat 34610841  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||| | ||||||||||||    
T  34610842 aagttcgccaagatagcttat 34610862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 20170613 - 20170502
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaataca 447  Q
    |||||| |||||||||| |||  | ||||||||||| ||||||| ||||  ||||| ||||||| || ||| ||| ||||| || ||||||||| |||||    
T  20170613 aacttaagaaaacagctaatgggatttttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatataca 20170514  T
Q  448 aaaacaatttaa 459  Q
    ||||||||||||    
T  20170513 aaaacaatttaa 20170502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 307 - 439
Target Start/End: Complemental strand, 22203561 - 22203429
Alignment:
Q  307 gagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 406  Q
    |||||||||||| | ||| | |||| ||||||| |||  || |||||||||||||||||||||||| ||| | ||||| |  | ||| |||  |||||||    
T  22203561 gagcttatctaccgacattaattttgtgagactgtttg-gagaacttatgaaaacagcttatgacattttacttaagcttaatgcagtttattttcataa 22203463  T
Q  407 gttctctaagatagcttat-aaaaccacttatag 439  Q
    |||||| |||||||||||| ||||| ||||||||    
T  22203462 gttctccaagatagcttatgaaaacaacttatag 22203429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 31365245 - 31365391
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||||| |||||||| |||| ||| ||| |||  || |||||||||| ||||||||||||| |||||||||  |||||||| || |  |||||    
T  31365245 ttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttcaactcattttcat 31365344  T
Q  405 aagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    || ||||| || ||        |||| |||||||||| |||||||||||||||||    
T  31365345 aaattctccaatat--------aaacaacttatagcatatacaaaaacaatttaa 31365391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 35959454 - 35959547
Alignment:
Q  367 atgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||| |||||| |||| ||||||||||||  |||| || |||||||| |||||||||| |||| ||||| |||| ||||||||| |||||||    
T  35959454 atgacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttatagaaacaacttacagcatatacaaaaataatttaa 35959547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 49556997 - 49556900
Alignment:
Q  306 tgagcttatctactggcataagttttatgagactctt-----ttc-gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 397  Q
    |||||||||| | ||||||||||||| ||||||||||     ||| || || ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  49556997 tgagcttatcaagtggcataagttttgtgagactcttagtctttcagagaatttatgaaaacagcttatgacaattttcataagcttttttcaactta 49556900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 441
Target Start/End: Complemental strand, 46478767 - 46478684
Alignment:
Q  361 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctcta--agatagcttataaaacc-acttatagca 441  Q
    |||||||||||| ||||||||||| ||||||| ||||  ||||||||||||| |  | ||||||||||||||| ||||||||||    
T  46478767 cagcttatgacagttttcataagcttttttcaacttattttcataagttctccaatatatagcttataaaaccaacttatagca 46478684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 13715508 - 13715665
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||| |||||||||| ||||| ||||| ||||||| |||   | |||||   ||||||||||||||||  |||||||||| ||||||| ||||  |||||    
T  13715508 ttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgacaactttcataagcatttttcaacttattttcat 13715607  T
Q  405 aagttctctaagatagcttat---aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| || || || ||||||   ||||| ||||||| || |||||||| ||| ||||    
T  13715608 aagttgtccaatatcgcttatataaaaacaacttatatcatatacaaaatcaaattaa 13715665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 34034225 - 34034158
Alignment:
Q  312 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttca 379  Q
    |||||||||||| | ||||| |||||||||||  || ||||||||||||||||||| |||| ||||||    
T  34034225 tatctactggcacacgttttgtgagactctttaggagaacttatgaaaacagcttaggacagttttca 34034158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 379 - 460
Target Start/End: Complemental strand, 47132391 - 47132309
Alignment:
Q  379 ataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaat 460  Q
    |||||| ||||||| ||||  ||||||| ||||| || ||||||||||||| || | ||||||| ||||||||||||||||||    
T  47132391 ataagcttttttcaacttattttcataacttctccaatatagcttataaaaacaacctatagcatatacaaaaacaatttaat 47132309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 37689319 - 37689212
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 447  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||| ||||  ||||||||| |||| | ||| || || ||||| || ||||||| |||||    
T  37689319 aacttaagaaaacagcttatgacaattttca-aagcttttttcaacttattttcataagtgctctgatata-ctcataaaaacaacctatagcatataca 37689222  T
Q  448 aaaacaattt 457  Q
    ||||||||||    
T  37689221 aaaacaattt 37689212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 46407905 - 46407974
Alignment:
Q  90 taagttgtttttagcttattttcataaagtcttcacaatagcttat-aaaacagtttgactttattttat 158  Q
    |||||||||| ||||||||||||| ||  || |||||||||||||| |||||||||| |||||| |||||    
T  46407905 taagttgtttctagcttattttcacaagctcatcacaatagcttatgaaaacagtttaactttactttat 46407974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 459
Target Start/End: Complemental strand, 4401127 - 4401026
Alignment:
Q  356 gaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaat 455  Q
    ||||||||||||||||| ||| |||||||  |||| | ||||  ||||||||||||| || ||| ||  |||||| |||||||||| |||| |||| |||    
T  4401127 gaaaacagcttatgacaatttccataagctgtttttaacttattttcataagttctccaatataact--taaaacaacttatagcatatacgaaaataat 4401030  T
Q  456 ttaa 459  Q
    ||||    
T  4401029 ttaa 4401026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 39602147 - 39602266
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||| |||||||||| |||||| |||| || |||   | | |||||||| ||||||||||||| | |||||||    |||||| ||||  |||||    
T  39602147 ttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgaca-tgttcataaattgttttcaacttattttcat 39602245  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||| ||||||||||||    
T  39602246 aagttctcaaagatagcttat 39602266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 44061046 - 44061114
Alignment:
Q  392 agcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||| |||||||||||||||||||| | ||| ||||| |||||||||  ||| |||||||||||||    
T  44061046 agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaa 44061114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 45541660 - 45541585
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 425  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||   ||||||||| || ||||||||||||    
T  45541660 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaggttattctcataagttatccaagatagcttat 45541585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 24684758 - 24684825
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 372  Q
    ||||||||||||||||||||||||||| ||||||  |||     |||||||||||||| |||||||||    
T  24684758 ttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgaca 24684825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 426
Target Start/End: Original strand, 28795839 - 28795910
Alignment:
Q  355 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 426  Q
    ||||||| | || ||||| ||||| |||||  |||||||||||  |||||||||||||||| ||||||||||    
T  28795839 tgaaaacggtttttgacaattttcttaagctcttttcagcttattttcataagttctctaatatagcttata 28795910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 37389311 - 37389196
Alignment:
Q  311 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 410  Q
    |||||||| | |||||||||| ||||||||||   || |||||||||||||| ||||||||| | |||| | ||   ||| ||||||   |||||||| |    
T  37389311 ttatctacagacataagttttgtgagactcttcgggagaacttatgaaaacaacttatgacattgttcaaatgctgcttttagcttattctcataagtac 37389212  T
Q  411 tctaagatagcttata 426  Q
    || |||||||||||||    
T  37389211 tccaagatagcttata 37389196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 46886628 - 46886783
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||| ||||||||| ||||  |||||| |||  |  | || |||||||||||||||| || | ||| ||||   | ||||| |||  ||||     
T  46886628 ttgagcttatctgctggcataaattttgagagactgtttgggtgagctgatgaaaacagcttatggcattgttcgtaagttatgttcaggttattttcaa 46886727  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| |||||||||||| |||||  ||||||||  ||||||||| |||||||    
T  46886728 aagttctccaagatagcttatgaaaacagcttatagctcatacaaaaataatttaa 46886783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 51929293 - 51929380
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 392  Q
    |||| ||||| |||||||||||||||| ||| ||| |||  || || || ||||||||| |||||||| |||||||| || |||||||    
T  51929293 ttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattatgacaattttcataggcttttttca 51929380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 307 - 425
Target Start/End: Complemental strand, 466325 - 466207
Alignment:
Q  307 gagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 406  Q
    ||||||| | |||| ||||  |||| ||||||| |||  || ||||||  |||||||||| | ||| ||||| ||||| ||||| ||||||  |||||||    
T  466325 gagcttaaccactgacatagattttgtgagactgtttgggataacttacaaaaacagcttttaacatttttcttaagctttttttagcttattttcataa 466226  T
Q  407 gttctctaagatagcttat 425  Q
    |||||| || |||||||||    
T  466225 gttctccaacatagcttat 466207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 305 - 411
Target Start/End: Original strand, 9832691 - 9832797
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| || || |||||||||| | | ||| |||  || ||||| ||||||||||||||| |  ||||||||| | ||||||| |||| ||| ||    
T  9832691 ttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaacttttttcaacttatatttat 9832790  T
Q  405 aagttct 411  Q
    |||||||    
T  9832791 aagttct 9832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 30956659 - 30956717
Alignment:
Q  402 cataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||||||| |||||||||| | ||||| |||||||||  |||||||||||||||||    
T  30956659 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaa 30956717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 30972471 - 30972529
Alignment:
Q  402 cataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||||||| |||||||||| | ||||| |||||||||  |||||||||||||||||    
T  30972471 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaa 30972529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 387 - 425
Target Start/End: Original strand, 33883768 - 33883806
Alignment:
Q  387 ttttcagcttaaattcataagttctctaagatagcttat 425  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  33883768 ttttcagcttattttcataagttctctaagatagcttat 33883806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 8e-30; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 41851669 - 41851514
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| || || ||||||| |||||||  ||  || || ||||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||    
T  41851669 ttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttcat 41851570  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    || ||||| |||||||||| | ||||| |||||||||| |||||||||||||||||    
T  41851569 aaattctccaagatagcttctgaaaacaacttatagcatatacaaaaacaatttaa 41851514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 15757594 - 15757750
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| |||||||||||||||| |||||||  ||  || || |||||||||| |||||||||| |||||| |||| ||||||||||||  |||||    
T  15757594 ttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagcttattttcat 15757693  T
Q  405 aagttctctaagatagcttataaa-accacttatagcaaatac-aaaaacaatttaa 459  Q
    | |||||||   |||||||||||| || |||||||||| |||| |||||||||||||    
T  15757694 acgttctcttgtatagcttataaatacaacttatagcatatacaaaaaacaatttaa 15757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 308 - 457
Target Start/End: Original strand, 43279466 - 43279616
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaa--acttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcata 405  Q
    |||||||||||| ||||||||||| ||||||| |||  || |  | ||||||||||||||||||||| ||||||||||| ||||||| ||||  |||| |    
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcaca 43279565  T
Q  406 agttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaattt 457  Q
    ||||||| || ||||||||| ||||| |||||||||  |||||||||||||||    
T  43279566 agttctccaatatagcttataaaaacaacttatagc--atacaaaaacaattt 43279616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 45229645 - 45229491
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||||||||||||| |   | ||  |||  || |||||||||||| | ||||||||| ||||||| ||| ||||||||||||  |||||    
T  45229645 ttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagcttttttcagcttattttcat 45229546  T
Q  405 aagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| |||||||||||| ||| || | ||| || |||||||||||||||||    
T  45229545 aagttctcgaagatagcttatgaaaacaatgataacatatacaaaaacaatttaa 45229491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 308 - 459
Target Start/End: Complemental strand, 18066259 - 18066107
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    ||||||||||||| |||||||||| ||| ||| ||||  | |||||||||||||||||||||||| |  ||||||||  |||||| ||||  ||| ||||    
T  18066259 agcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaag 18066160  T
Q  408 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| |||||||||||| |||||  ||||||||  |||  ||||||||||||    
T  18066159 ttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaa 18066107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 305 - 441
Target Start/End: Complemental strand, 26202162 - 26202025
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||| ||||||| ||| |||||||||| ||||| ||||| | | || |||||| |||| ||||||||| ||||||||||| ||||||| ||||  |||||    
T  26202162 ttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcataagcttttttcaacttattttcat 26202063  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagca 441  Q
    |||||||| || ||| ||||| ||||| ||||||||||    
T  26202062 aagttctccaatatatcttataaaaacaacttatagca 26202025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 305 - 451
Target Start/End: Complemental strand, 20952489 - 20952342
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| |||||||| ||||||| | ||||| |||  || ||||||||||||||| ||||| || ||||||| | | ||||||| ||||  |||||    
T  20952489 ttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttttttcaacttattttcat 20952390  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 451  Q
    |||||||| || |||||| || ||||| |||||||||| ||| |||||    
T  20952389 aagttctccaatatagctaataaaaacaacttatagcatataaaaaaa 20952342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 39659445 - 39659600
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| |||||||||  |||| || | |  || |||||| |||||||||||||||||  |||  ||||| ||| ||| ||||  |||||    
T  39659445 ttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgacaaattttctaagcttttgtcaccttatcttcat 39659544  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||||||| ||||||||| ||||| | ||||| || | |||||||||||||||    
T  39659545 aagttctctaatatagcttataaaaacaagttataacatagacaaaaacaatttaa 39659600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 347 - 421
Target Start/End: Complemental strand, 33981214 - 33981140
Alignment:
Q  347 aaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 421  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||| ||||| ||||||| ||||| ||||||||    
T  33981214 aaaacttatgaaaacggcttatgacacatttcataagcttttttcaacttaatttcataaattctccaagatagc 33981140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 41812072 - 41812181
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 448  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||| ||| | ||| |||||| || |||||||||| | ||||  ||| ||||| ||||||    
T  41812072 aacttttgaaaacagcttatgacatttttcataagcttttttcaactt-atttcctaagttttccaagatagcttttgaaacatcttgtagcatatacaa 41812170  T
Q  449 aaacaatttaa 459  Q
    |||||||||||    
T  41812171 aaacaatttaa 41812181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 409
Target Start/End: Complemental strand, 449981 - 449877
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||||||||||||| | |||  ||  |||| |||||||||||||||||| |||||||||||  |||| | ||||| || ||    
T  449981 ttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataagctatttttaacttaatttgat 449882  T
Q  405 aagtt 409  Q
    |||||    
T  449881 aagtt 449877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 308 - 459
Target Start/End: Complemental strand, 32592717 - 32592566
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||  |||||||||||||  ||| || |||  || |||||||||||| |||||| |||| ||||||||||| ||| ||| ||||  ||||||||    
T  32592717 agcttatctgatggcataagttttgggagtctatttgggagaacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataag 32592618  T
Q  408 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| || || |||||| ||||| |||||||||  |||| ||||||||||||    
T  32592617 ttctccaatattgcttataaaaacaacttatagcgtatac-aaaacaatttaa 32592566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 1626034 - 1625879
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||  ||| |||||||||| | ||||| |||  || |||||||||||  ||||||||||| | ||||||||   ||||||||| |  ||| |    
T  1626034 ttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgt 1625935  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| |||||||||||| ||||| ||||||| |  |||| ||||||||||||    
T  1625934 aagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaa 1625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 41241069 - 41241223
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| |||| |||| |||||| ||||| | |||   | ||||| ||||||||  |||| || |||| ||||||| ||||||||||||| ||||     
T  41241069 ttgagcttatttactcgcatgagttttgtgagattgtttggtagaacttgtgaaaacaaattataac-ctttccataagcttttttcagcttaatttcac 41241167  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| || |||||| ||||  ||||| |||||||||| |||||||||||||||||    
T  41241168 aagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaa 41241223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 305 - 430
Target Start/End: Complemental strand, 750804 - 750679
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| |||||| |||||||| ||||| ||||| | ||| | | |||||||||||| |||| |||||| | |||||||||  |||| ||||||  | |||    
T  750804 ttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcat 750705  T
Q  405 aagttctctaagatagcttataaaac 430  Q
    |||||||| |||||||||||| ||||    
T  750704 aagttctccaagatagcttatgaaac 750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 459
Target Start/End: Original strand, 12464416 - 12464564
Alignment:
Q  312 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 411  Q
    ||||||||  |||||||||| ||||| | |||  || | ||||  |||| |||||| ||||  ||||| |||| ||||||||||||  |||| |||||||    
T  12464416 tatctactaacataagttttgtgagaatgtttgggacatcttacaaaaaaagcttacgacatatttcacaagcttttttcagcttattttcacaagttct 12464515  T
Q  412 ctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    | |||||||||||| ||||   ||||||||| |||||||||||||||||    
T  12464516 ccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaa 12464564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 19608569 - 19608661
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 397  Q
    ||||| |||||||||| |||| ||||||||||||| ||| ||| ||||||| || ||||||||||||| | |||||||||  |||| ||||||    
T  19608569 ttgagtttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatgacattcttcataagctattttgagctta 19608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 425
Target Start/End: Original strand, 41293111 - 41293219
Alignment:
Q  317 actggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaag 416  Q
    ||||| || |||||| ||||||| |||  || ||||||| |||||||||||||||| ||  |||||||  ||||||||||| |||||||||| ||| | |    
T  41293111 actggtattagttttgtgagactatttgggagaacttataaaaacagcttatgacatttcgcataagctgttttcagcttatattcataagtactccagg 41293210  T
Q  417 atagcttat 425  Q
    |||||||||    
T  41293211 atagcttat 41293219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 322 - 429
Target Start/End: Original strand, 7035520 - 7035627
Alignment:
Q  322 cataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 421  Q
    |||||||||| ||||||| ||||  | |||||||| ||||||||||||||||  ||||||||   ||||| |||||  |||||||||| || |||||||     
T  7035520 cataagttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataagttttccaagatagt 7035619  T
Q  422 ttataaaa 429  Q
    ||||||||    
T  7035620 ttataaaa 7035627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 456
Target Start/End: Original strand, 5745768 - 5745873
Alignment:
Q  352 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaatacaaaa 450  Q
    ||||||||||||||||||||| ||||||||||| |||| || || |  ||| ||||| ||| || |||||||||| |||  |||||||||| ||| ||||    
T  5745768 ttatgaaaacagcttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttatagaaataacttatagcatataaaaaa 5745867  T
Q  451 acaatt 456  Q
    ||||||    
T  5745868 acaatt 5745873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 9174949 - 9174808
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| ||||||||||| | ||||||| |||  |    ||| | |||||| ||||||||| | |||||||||  |||||||||||  |||||    
T  9174949 ttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttcataagctattttcagcttattttcat 9174850  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaata 445  Q
    ||| ||| ||||||||||||| |||||  ||||||| |||||    
T  9174849 aagctctgtaagatagcttatgaaaacagcttatagtaaata 9174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 33319752 - 33319903
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||| |||||||||||||||| |  |||||| |||  || ||||| |  ||| |||||||||||  ||| |||||| ||||||||||||  |||||    
T  33319752 ttgagcttgtctactggcataagttgt--gagactgtttgggagaacttttataaatagcttatgaca--tttaataagcttttttcagcttattttcat 33319847  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| ||||||| |||| |||||   |||||| | ||||||||||| |||||    
T  33319848 aagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagtttaa 33319903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 4607059 - 4606939
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||    ||||||||| ||||||| |||  || ||||| |||||||| ||||||||| | ||||| |||   ||| ||||||  |||||    
T  4607059 ttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcat 4606960  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||| ||||||||||||    
T  4606959 aagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 413
Target Start/End: Complemental strand, 13325704 - 13325596
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||| | ||  ||||||||||||||| | ||   || ||||| |||||||||||||||||| ||  ||||||| |||||||||| |  |||||    
T  13325704 ttgagcttatcaattgatataagttttatgagattgttcgggagaacttttgaaaacagcttatgacatttcacataagcttttttcagctcattttcat 13325605  T
Q  405 aagttctct 413  Q
    |||||||||    
T  13325604 aagttctct 13325596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 27317513 - 27317449
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatg 369  Q
    |||||||||||||| | |||||||||||||||||| |||  || |||||||||||||| ||||||    
T  27317513 ttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 30331882 - 30331806
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 384  Q
    ||||||||||||| |||||||||| ||||||| |||  || |||||||||||| | ||||||||| |||||| ||||    
T  30331882 agcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcacaagc 30331806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 428
Target Start/End: Original strand, 10619156 - 10619279
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| |||||||||| || ||||||| |||||| | ||  || |||| |||||||||||||||| || |||||   ||| ||||||||||||  |||||    
T  10619156 ttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcat 10619255  T
Q  405 aagttctctaagatagcttataaa 428  Q
    |||| ||| ||  |||||||||||    
T  10619256 aagtactccaatctagcttataaa 10619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 42659147 - 42659214
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 372  Q
    |||||||||| |||||||||||||||| ||||||| |||  || || || ||||||||||||||||||    
T  42659147 ttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatgaca 42659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 305 - 419
Target Start/End: Original strand, 31561678 - 31561792
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| |||||||||  |||||||||| | | ||| |||  |||||||| |||||||||| ||||||  ||||||||||  | ||| ||||||  |||||    
T  31561678 ttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatatgacgtttttcataagattgtttaagcttactttcat 31561777  T
Q  405 aagttctctaagata 419  Q
    |||||||| ||||||    
T  31561778 aagttctccaagata 31561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 42419927 - 42419853
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttca 379  Q
    ||||| |||||| ||| |||||||||| ||||||| |||  || |||||| ||||||||||||||||| ||||||    
T  42419927 ttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttca 42419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 7928234 - 7928351
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatg-acacttttcataagcctttttcagcttaaattca 403  Q
    ||||||||||||| || |||||||| | ||||||| ||    | ||||| ||||||||||||||| ||| | ||||||||   |||||||||||  ||||    
T  7928234 ttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataagttgttttcagcttattttca 7928333  T
Q  404 taagttctctaagatagc 421  Q
    ||||||||| ||||||||    
T  7928334 taagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 20926577 - 20926516
Alignment:
Q  365 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 426  Q
    |||||||| ||||||| ||| ||||||| ||||  |||||||||||||||| ||||||||||    
T  20926577 ttatgacaattttcattagcttttttcaacttattttcataagttctctaatatagcttata 20926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 459
Target Start/End: Complemental strand, 40279285 - 40279176
Alignment:
Q  351 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 449  Q
    |||||||||||| |||||| || | ||||||| |  ||||||||| |  ||||||||||||| || ||||||||| ||||| ||||||| |  |||| ||    
T  40279285 cttatgaaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaa 40279186  T
Q  450 aacaatttaa 459  Q
    ||||||||||    
T  40279185 aacaatttaa 40279176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 422
Target Start/End: Complemental strand, 43036690 - 43036574
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| |  |||||||||| ||||| | |||  |||||||||||| |||| ||||||||| | |||||||  || ||| ||||||  |||||    
T  43036690 ttgagcttatctagttacataagttttgtgagagtatttgggaaaacttatgagaacatcttatgacattattcataa-actgttttagcttactttcat 43036592  T
Q  405 aagttctctaagatagct 422  Q
    ||||| || |||||||||    
T  43036591 aagttttccaagatagct 43036574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 451
Target Start/End: Complemental strand, 2142788 - 2142640
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||| ||||||||  ||||||||||||||||||| |||  || ||||||||||||||  || ||||| | ||||| |||  |||| ||||||  |||||    
T  2142788 ttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctgtttttagcttattttcat 2142689  T
Q  405 aagttct-ctaagatagcttat-aaaaccacttatagcaaatacaaaaa 451  Q
    || |||| | ||||||  |||| ||||| |||||||||  |||||||||    
T  2142688 aaattctcccaagataaattatgaaaacaacttatagcttatacaaaaa 2142640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 412
Target Start/End: Complemental strand, 15305808 - 15305701
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| || |||||||||| ||| ||| |||   | ||||| ||| |||| |||||| || ||||||||||  ||||||| ||||  |||||    
T  15305808 ttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcataagtttttttcaacttattttcat 15305709  T
Q  405 aagttctc 412  Q
    ||||||||    
T  15305708 aagttctc 15305701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 424
Target Start/End: Complemental strand, 16451208 - 16451133
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 424  Q
    |||||||||||||| ||||||||| | ||||| |||  |||||||||||  ||||  ||||||| |||||||||||    
T  16451208 aacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagctta 16451133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 26626963 - 26626852
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 447  Q
    |||||| ||||| ||||||||||| | ||||||| |  ||||||| |||  ||||||||||||  |||||||||||| |||||  ||| ||||  ||||     
T  26626963 aacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacg 26626864  T
Q  448 aaaacaatttaa 459  Q
    ||||||||||||    
T  26626863 aaaacaatttaa 26626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 33192291 - 33192209
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca 432  Q
    ||||||||||||||| |||||||| | | |||||||  ||||||||||| ||| ||||| |||| | |||||||||| ||||||    
T  33192291 aacttatgaaaacagtttatgaca-tatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaacca 33192209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 2227248 - 2227194
Alignment:
Q  357 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 411  Q
    |||||||||||||||| ||||||||| | ||||||||||||  ||| ||||||||    
T  2227248 aaaacagcttatgacatttttcataaacatttttcagcttattttcgtaagttct 2227194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 3067396 - 3067446
Alignment:
Q  96 gtttttagcttattttcataaagtcttcacaatagcttat-aaaacagttt 145  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||||||||||    
T  3067396 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagttt 3067446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 42458076 - 42457962
Alignment:
Q  311 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 410  Q
    |||| |||||||||||||||| ||||| | |||  || |  ||||||||||| ||||  ||| |||  |||||   |||||||||||  |||||| ||||    
T  42458076 ttatttactggcataagttttgtgagagtgtttaggagagtttatgaaaacaacttaaaacattttcaataagttgttttcagcttattttcatatgttc 42457977  T
Q  411 tctaagatagcttat 425  Q
    |||||||||||||||    
T  42457976 tctaagatagcttat 42457962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 43570503 - 43570446
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||||||||||||||||| | |||||||| |||||| ||||||  ||||||||    
T  43570503 aacttatgaaaacagcttatgacattgttcataag-cttttttagcttattttcataag 43570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 1647325 - 1647249
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 426  Q
    |||||||||||||||||||||||| |  ||||||||  |||||||||||  | |||||| ||||||  ||||||||||    
T  1647325 aacttatgaaaacagcttatgaca-tgctcataagctgttttcagcttatttccataagctctctataatagcttata 1647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 12289879 - 12289774
Alignment:
Q  357 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaata-caaaaacaa 454  Q
    ||||||| |||||||| | ||||||||| ||||||| ||||  ||||||||||||| || |||  |||| ||||| ||||||| ||  || |||||||||    
T  12289879 aaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataacatgtaccaaaaacaa 12289780  T
Q  455 tttaat 460  Q
    ||||||    
T  12289779 tttaat 12289774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 305 - 425
Target Start/End: Original strand, 26143578 - 26143696
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||| ||||| ||||  |||||| |||  || |||||| ||||||| |||||| || | |||| | |   |||||||||||  |||||    
T  26143578 ttgagcttatctactgacataaatttt--gagactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggttattttcagcttattttcat 26143675  T
Q  405 aagttctctaagatagcttat 425  Q
    |||||||| ||| ||||||||    
T  26143676 aagttctccaagttagcttat 26143696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 305 - 426
Target Start/End: Complemental strand, 36534902 - 36534781
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||| | ||  |||||||||| ||||||| |||  || |||||||||||||||||||| | | | ||||||| |  |||||||||||  |||||    
T  36534902 ttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcagcttattttcat 36534803  T
Q  405 aagttctctaagatagcttata 426  Q
     | |||||  | ||||||||||    
T  36534802 taattctcctatatagcttata 36534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 38916245 - 38916330
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 390  Q
    ||||||||||||||  ||||| ||||| ||||  | |||  || |||||||||||| |||||| | |||||||||||||| |||||    
T  38916245 ttgagcttatctaccagcataggttttgtgaggttgtttaggagaacttatgaaaaaagcttacgccacttttcataagctttttt 38916330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 5e-28; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 305 - 429
Target Start/End: Complemental strand, 2295230 - 2295106
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||||||||||||||| ||||||| |||  || |||||||||||||||||||||||| |||||||||||  | |||| ||||  ||||     
T  2295230 ttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagctctattcaacttattttcac 2295131  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    ||||||||| | |||||||||||||    
T  2295130 aagttctctgatatagcttataaaa 2295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 319 - 451
Target Start/End: Complemental strand, 49938867 - 49938734
Alignment:
Q  319 tggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagat 418  Q
    ||||||||||||| ||||| | |||  || |||||||||||||||||||||||| |||||| |||| ||||||| ||||  |||||||||||||||| ||    
T  49938867 tggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatat 49938768  T
Q  419 agcttat-aaaaccacttatagcaaatacaaaaa 451  Q
    ||||||| ||||| ||||||| || |||||||||    
T  49938767 agcttataaaaacaacttataacatatacaaaaa 49938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 3233951 - 3234106
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| || | |||||||| ||||||| ||   || |||||||||||||| ||||| ||| ||||||||||  ||||||  ||||  |||||    
T  3233951 ttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagtttttttctacttattttcat 3234050  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || ||||||||| ||||| |||||||||| |||||||||||||||||    
T  3234051 aagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaa 3234106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 309 - 459
Target Start/End: Complemental strand, 13810128 - 13809977
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 408  Q
    |||||||||||| | |||||||| |||||||||||| || |||||||||| |||| |||||||| |||||| |||  ||| | ||||||  |||| ||||    
T  13810128 gcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtttttcttagcttattttcacaagt 13810029  T
Q  409 tctctaagatagcttataaaaccact-tatagcaaatacaaaaacaatttaa 459  Q
    ||||||| |||| |||||||| || | ||||||| |||||||||||||||||    
T  13810028 tctctaatatagtttataaaaacaatatatagcatatacaaaaacaatttaa 13809977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 14576590 - 14576744
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||||||||||||| ||| |||| ||  ||| |||  || ||||| |||||||||||||||||| |||||| |||| ||||||||||||  ||||     
T  14576590 ttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagcttttttcagcttattttca- 14576688  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||||||||| ||||||||| ||||  | |||||||| |||||||||||||||||    
T  14576689 aagttctctaatatagcttataaaaaaaaattatagcatatacaaaaacaatttaa 14576744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 305 - 429
Target Start/End: Complemental strand, 29904885 - 29904761
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||||| ||||||||||| ||||||| |||  || ||||||| ||||||||||||| || |||||| |||| ||||||| ||||  |||||    
T  29904885 ttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttattttcat 29904786  T
Q  405 aagttctctaagatagcttataaaa 429  Q
    ||||||| ||| |||| ||||||||    
T  29904785 aagttctataatatagtttataaaa 29904761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 15477655 - 15477578
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 426  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||| ||||||    
T  15477655 aacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 324 - 459
Target Start/End: Original strand, 17603339 - 17603475
Alignment:
Q  324 taagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctt 423  Q
    ||||||||| |||||| ||   || |||||| ||||||||||||||||| ||||||||| | |||| || ||||  |||| |||||||| || |||||||    
T  17603339 taagttttacgagactattagggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagctt 17603438  T
Q  424 at-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    || ||||| |||||||||| |||||||||||||||||    
T  17603439 ataaaaacaacttatagcatatacaaaaacaatttaa 17603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 24915034 - 24915142
Alignment:
Q  352 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 450  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||||  |||| |||||||| |||| ||||||| |||||  ||||||||| ||||||||    
T  24915034 ttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaa 24915133  T
Q  451 acaatttaa 459  Q
    |||||||||    
T  24915134 acaatttaa 24915142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 346 - 458
Target Start/End: Original strand, 37631536 - 37631649
Alignment:
Q  346 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaat 444  Q
    ||||||||||||||||||||| ||||| |||||| |||| ||||||||||||  ||||||||||||| || |||||||| |||| || || ||| || |     
T  37631536 gaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatac 37631635  T
Q  445 acaaaaacaattta 458  Q
    ||||||||||||||    
T  37631636 acaaaaacaattta 37631649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 6557106 - 6556950
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataa-gcctttttcagcttaaattca 403  Q
    |||| ||||||||||  |||||||||| ||||||| |||  || |||||||||||| ||||||||||| |||||| || |  ||||| ||||||   |||    
T  6557106 ttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatgacagttttcaaaaggttttttttagcttattgtca 6557007  T
Q  404 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| ||| ||| ||||| ||||| ||||||| || |||||||||||||||||    
T  6557006 taagttctttaatataacttataaaaacaacttataacatatacaaaaacaatttaa 6556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 318 - 460
Target Start/End: Original strand, 27970243 - 27970387
Alignment:
Q  318 ctggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt-ctctaag 416  Q
    |||||||||||||| ||| |||||||  || ||||||| ||||| | |||||||| ||||||||||| |||||||| |||  |||||||||| | | ||     
T  27970243 ctggcataagttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataagttccccaaaa 27970342  T
Q  417 atagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 460  Q
    |||| ||||  |||| |||||||||| ||||||||||||||||||    
T  27970343 atagtttatggaaacaacttatagcatatacaaaaacaatttaat 27970387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 317 - 459
Target Start/End: Complemental strand, 27976725 - 27976574
Alignment:
Q  317 actggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat---------aag 407  Q
    |||| |||||||||| | ||||| |||  |||||||| |||||| ||||||||||| ||||||||||| ||||||||||||  |||||         |||    
T  27976725 actgacataagttttgttagactgtttg-gaaaacttttgaaaatagcttatgacatttttcataagcttttttcagcttattttcattatttcattaag 27976627  T
Q  408 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||||| |||||||||||| ||||| |||||||||| |||||||||||||||||    
T  27976626 ttctcgaagatagcttatgaaaacaacttatagcatatacaaaaacaatttaa 27976574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 30286499 - 30286611
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaa-atac 446  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| || || ||  | ||||||  || ||||||||| ||||| ||||||||||| ||||    
T  30286499 aacttatgaaaacagcttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaacaacttatagcaacatac 30286598  T
Q  447 aaaaacaatttaa 459  Q
    |||||||||||||    
T  30286599 aaaaacaatttaa 30286611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 305 - 459
Target Start/End: Complemental strand, 473297 - 473143
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||| |||||||||||||||||| | ||| ||  |||  || |||||||||||| ||||||| ||| ||||||||||| ||||||| ||||  |||||    
T  473297 ttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat-acaattttcataagcttttttcaacttattttcat 473199  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||| || | | ||||| ||||| |||||||||| | || ||||||||||||    
T  473198 aagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaa 473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 308 - 456
Target Start/End: Complemental strand, 2778022 - 2777874
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||| | ||||||||||| ||||||| |||  || ||||||||||| || ||||||||  | |||||||||| |||||||||||  ||||||||    
T  2778022 agcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttatgac-gtattcataagccgttttcagcttattttcataag 2777924  T
Q  408 ttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaatt 456  Q
    ||||| ||| || |||| ||||||  ||||||||  ||||||| ||||||    
T  2777923 ttctccaagttaacttattaaaacagcttatagcttatacaaagacaatt 2777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 305 - 441
Target Start/End: Original strand, 43230708 - 43230843
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||| ||||||||||||||||||| |||| | |||  || || ||||||||||||||  ||||| |||| |||||| ||||||| ||||  |||||    
T  43230708 ttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagct--tgacagtttttataagcttttttcaacttattttcat 43230805  T
Q  405 aagttctctaagatagcttataa-aaccacttatagca 441  Q
     ||||||| || ||||| ||||| ||| ||||||||||    
T  43230806 tagttctccaatatagcctataagaacaacttatagca 43230843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 458
Target Start/End: Complemental strand, 51688782 - 51688685
Alignment:
Q  361 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattta 458  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||| |||| | |||||||||  ||||| ||||||||||  |||||||||||||||    
T  51688782 cagcttatgacacttttcagaagtttttttcagcttaatttcataag-tctccacgatagcttacgaaaacaacttatagcatgtacaaaaacaattta 51688685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 305 - 429
Target Start/End: Complemental strand, 5721059 - 5720935
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataag-cctttttcagcttaaattca 403  Q
    ||||||||| ||||| ||||||||||| |  |||| |||  || ||||||||||||||||||||||||  |||||||||   |||||||||| |  ||||    
T  5721059 ttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgaca-atttcataagtattttttcagctgattttca 5720961  T
Q  404 taagttctctaagatagcttataaaa 429  Q
    || ||||||||| |||||||||||||    
T  5720960 tatgttctctaatatagcttataaaa 5720935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 354 - 457
Target Start/End: Original strand, 51929524 - 51929628
Alignment:
Q  354 atgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaac 452  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||  | ||||||||||| || |||| |||||||| || ||||  ||| ||| ||||||    
T  51929524 atgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagcttaaggcatatataaaaac 51929623  T
Q  453 aattt 457  Q
    |||||    
T  51929624 aattt 51929628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 349 - 424
Target Start/End: Complemental strand, 37473493 - 37473418
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 424  Q
    ||||| |||||||| ||||||||| ||||||||||| |||| |||||||  ||||||||||||| |||||| ||||    
T  37473493 aacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaagataactta 37473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 42575405 - 42575492
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 392  Q
    ||||||||||||||| |||||| |||| |||| || |||  ||||| |||| |||||| ||||||||| ||||||||||| |||||||    
T  42575405 ttgagcttatctactagcataaattttgtgaggctgtttgagaaaatttataaaaacaacttatgacagttttcataagcttttttca 42575492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 305 - 429
Target Start/End: Complemental strand, 5741740 - 5741616
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt-cagcttaaattca 403  Q
    ||||||||| ||||| ||||||||||| |   ||| |||  || |||||||||||||| ||||||||| ||| ||||||  ||||| ||||| |  ||||    
T  5741740 ttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgacaattt-cataagtattttttcagctgattttca 5741642  T
Q  404 taagttctctaagatagcttataaaa 429  Q
    |||||||||||| |||||||||||||    
T  5741641 taagttctctaatatagcttataaaa 5741616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 41195132 - 41195284
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    |||||||| |||||||||||||||| |  || ||| |||  || ||||| |  ||| ||||||||||| |||| |||||| ||||||||||||  |||||    
T  41195132 ttgagcttgtctactggcataagttgt--gatactgtttgggagaacttttataaatagcttatgaca-ttttaataagcttttttcagcttattttcat 41195228  T
Q  405 aagttctctaagatagcttataaaaccactt-atagcaaatacaaaaacaatttaa 459  Q
    |||||||| ||||||| |||| ||| || || |||| | ||||||||||| |||||    
T  41195229 aagttctccaagatagtttatgaaaacagttgatagtatatacaaaaacagtttaa 41195284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 452
Target Start/End: Complemental strand, 42174933 - 42174841
Alignment:
Q  361 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaac 452  Q
    |||||||||||| |||||||||||  |||| | ||||  ||||||||||||| || ||| ||||| ||||| |||||||||| ||||||||||    
T  42174933 cagcttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaaac 42174841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 454
Target Start/End: Complemental strand, 36872845 - 36872716
Alignment:
Q  322 cataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 421  Q
    ||||||||||  |||||| |||| || || ||||||||||   |||||||| |||| |||||| ||||||| ||||  ||||||||||||  || |||||    
T  36872845 cataagttttgcgagactgttttggagaatttatgaaaac---ttatgacaattttgataagc-tttttcaacttattttcataagttctgcaatatagc 36872750  T
Q  422 ttataaaacca-cttatagcaaatacaaaaacaa 454  Q
    || ||||| || ||||||||| ||||||||||||    
T  36872749 ttgtaaaaacaacttatagcacatacaaaaacaa 36872716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 37517102 - 37517189
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 392  Q
    |||||||||| |||| ||||||||||| ||||||| | |   | |||||| ||||||||||||||||| |||||| |||| |||||||    
T  37517102 ttgagcttatatacttgcataagttttgtgagactgtatgaaagaacttacgaaaacagcttatgacaattttcaaaagcttttttca 37517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 38001729 - 38001639
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctt 396  Q
    ||||| ||||| |||| |||||||||| ||||||| |||  || ||||||||||||||||||||||| || ||||||||   ||||||||||    
T  38001729 ttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatgac-ctgttcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 41184630 - 41184741
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacc-acttatagcaaataca 447  Q
    |||||||||||| ||||||||||| ||||||||||  ||||||| ||||  |||||||||| || || || |  ||||||||| | |||||  | |||||    
T  41184630 aacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataagttttccaatatggtatataaaaccaaattataatatataca 41184729  T
Q  448 aaaacaatttaa 459  Q
    ||||||||||||    
T  41184730 aaaacaatttaa 41184741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 328 - 426
Target Start/End: Original strand, 27820156 - 27820253
Alignment:
Q  328 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 426  Q
    |||| ||||||| |||| || || ||||||||| ||||||| ||| | |||||||||  |||||||||||  ||||||| |||| ||||||||||||||    
T  27820156 ttttgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttattttcataaattctttaagatagcttata 27820253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 309 - 419
Target Start/End: Original strand, 38018304 - 38018414
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 408  Q
    ||||||||||||||||||||||| |||||||  ||  |||||||||||||| ||| ||| |||| | ||||| ||   |||||||||||  ||||| | |    
T  38018304 gcttatctactggcataagttttgtgagactggttgggaaaacttatgaaagcagattaggacattgttcattaggtattttcagcttattttcatgaat 38018403  T
Q  409 tctctaagata 419  Q
    |||| ||||||    
T  38018404 tctccaagata 38018414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 27146191 - 27146315
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaa-aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 403  Q
    ||||||||||||| ||||||||||||| ||||||| | || ||| |||||| | ||||| ||||||||| | |||||||||  |||||| ||||  |||     
T  27146191 ttgagcttatctattggcataagttttgtgagact-tgttggaagaacttaaggaaacaacttatgacattgttcataagctgttttcaacttactttcg 27146289  T
Q  404 taagttctctaagatagcttataaaa 429  Q
    ||||||||  ||||||| ||| ||||    
T  27146290 taagttcttcaagatagtttacaaaa 27146315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 458
Target Start/End: Original strand, 27820330 - 27820427
Alignment:
Q  362 agcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaattta 458  Q
    |||||| |||| | |||||||||  |||||||||||  ||||||| ||||| |||||||||||||||| || | ||||||  ||||| ||||||||||    
T  27820330 agcttacgacattgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaattta 27820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 38503445 - 38503518
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagct 422  Q
    |||||||| ||||||| ||||||| | ||||||||   |||||||||||  ||||||||||||| |||||||||    
T  38503445 aacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 451
Target Start/End: Original strand, 40977383 - 40977487
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca--cttatagcaaatac 446  Q
    ||||||||||||||  |||||||| |||||| |||| |||| |||||||  |||||| ||||||| | || ||||||||||  |  ||||||||| ||||    
T  40977383 aacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaattaaccttatagcatatac 40977482  T
Q  447 aaaaa 451  Q
    |||||    
T  40977483 aaaaa 40977487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 459
Target Start/End: Complemental strand, 47432160 - 47432075
Alignment:
Q  374 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||| |||| ||||||||||||  ||||||| ||||  || ||| ||||||||||  ||||||||| || ||||||||||||||    
T  47432160 ttttcacaagcttttttcagcttattttcataaattcttcaatataacttataaaacaccttatagcatattcaaaaacaatttaa 47432075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 456
Target Start/End: Complemental strand, 1432649 - 1432497
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||| || | ||||| |||| ||||||| |||   | |||||||||||| ||| ||||||| | |||||||| | |  | ||||||  |||||    
T  1432649 ttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacattgttcataagacatacttagcttactttcat 1432550  T
Q  405 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    |||||||| ||||||| |||| ||||| | |||||||  ||| ||||||||||    
T  1432549 aagttctccaagatagtttatgaaaacaatttatagcttataaaaaaacaatt 1432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 7136979 - 7137054
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 425  Q
    ||||||||||||  |||||||||| | ||||||||   |||||||||||  ||||||||||||| ||||||||||||    
T  7136979 aacttatgaaaatcgcttatgaca-tattcataagttattttcagcttattttcataagttctccaagatagcttat 7137054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 308 - 451
Target Start/End: Complemental strand, 14332112 - 14331970
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    ||||||||||||| |||| ||||| ||||||| ||   |  ||||||||||||||  ||||||||| |||| | ||| ||||||||||||| |||| |||    
T  14332112 agcttatctactgtcatatgttttgtgagactgttcgggtgaacttatgaaaacaaattatgacac-tttcgttagcttttttcagcttaatttca-aag 14332015  T
Q  408 ttctctaagatagc-ttataaaaccacttatagcaaatacaaaaa 451  Q
    | ||| |||||||| ||   |||| |||||||||| |||||||||    
T  14332014 tcctccaagatagcatttggaaacaacttatagcatatacaaaaa 14331970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 14385729 - 14385781
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatga 357  Q
    ||||||||||||||||||||||||||  ||||||| |||| || |||||||||    
T  14385729 ttgagcttatctactggcataagtttcgtgagactattttggagaacttatga 14385781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 33186426 - 33186318
Alignment:
Q  319 tggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgac-acttttcataagcctttttcagcttaaattcataagttctctaaga 417  Q
    ||||||||||||| ||||||| | |  || ||||||||||||| | ||||||| | |||||| |||| ||||||||||||  |  ||||||||||||| |    
T  33186426 tggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaatttttcaaaagcttttttcagcttatttatataagttctctaata 33186327  T
Q  418 tagcttata 426  Q
    ||| |||||    
T  33186326 tagattata 33186318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 440
Target Start/End: Original strand, 37842336 - 37842427
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagc 440  Q
    |||||||||||||| || |||||| | |||||||||  |||||||||||  || |||||||||  |||||||||||| ||||| |||||||||    
T  37842336 aacttatgaaaacatctaatgaca-tgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagc 37842427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 38247461 - 38247397
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatg 369  Q
    |||| |||||||||||||||||||||| ||  ||| |||  || |||||||||||||||||||||    
T  38247461 ttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 11893604 - 11893655
Alignment:
Q  90 taagttgtttttagcttattttcataaagtcttcacaatagcttataaaaca 141  Q
    ||||||||||| ||||||||| |||||| |||||| |||||||||| |||||    
T  11893604 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaaca 11893655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 384
Target Start/End: Original strand, 37617401 - 37617480
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 384  Q
    ||||| ||||||| || | |||||||| ||||||| ||| ||| || ||||||||||||||| |||||  ||||||||||    
T  37617401 ttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagcttttgacaaatttcataagc 37617480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 457
Target Start/End: Complemental strand, 39596633 - 39596578
Alignment:
Q  403 ataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaattt 457  Q
    ||||| |||| ||||||||||||||||||| ||||||||  |||||||||||||||    
T  39596633 ataagctctccaagatagcttataaaaccatcttatagcttatacaaaaacaattt 39596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 383
Target Start/End: Original strand, 52863290 - 52863365
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataag 383  Q
    ||||||||||||||||||| |||| || |||| |||  || |||||||| ||| ||||||||||| ||||| ||||    
T  52863290 agcttatctactggcataatttttgtgtgactgtttcggagaacttatggaaaaagcttatgacatttttcttaag 52863365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 387 - 456
Target Start/End: Complemental strand, 49888819 - 49888749
Alignment:
Q  387 ttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    ||||| |||||  |||||||||||||||||||||||||| ||||| ||| |||||  |||| |||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaatt 49888749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 36872352 - 36872299
Alignment:
Q  352 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcata 405  Q
    ||||||||||||||||| | | ||||||||||| ||||||| ||||| ||||||    
T  36872352 ttatgaaaacagcttattataattttcataagcttttttcaacttaatttcata 36872299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 7e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 309 - 425
Target Start/End: Complemental strand, 31813291 - 31813175
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 408  Q
    |||||| |||||||||||||||| ||||||| |||  || ||||||||||||  |||||||| | | |||||||||| |||||||||||  |||||| ||    
T  31813291 gcttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcatatgt 31813192  T
Q  409 tctctaagatagcttat 425  Q
    |||| ||||||||||||    
T  31813191 tctccaagatagcttat 31813175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 355 - 457
Target Start/End: Original strand, 34430447 - 34430550
Alignment:
Q  355 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaaca 453  Q
    |||||||||||||||||| || |||||||| ||||||||||||  ||||||| ||||| |||||||||||| |||||  |||||| || |||||||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaaca 34430546  T
Q  454 attt 457  Q
    ||||    
T  34430547 attt 34430550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 355 - 425
Target Start/End: Complemental strand, 9763644 - 9763574
Alignment:
Q  355 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 425  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||  || |||||||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagcttat 9763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 315 - 456
Target Start/End: Original strand, 20368127 - 20368268
Alignment:
Q  315 ctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctcta 414  Q
    |||||| |||||||||| | ||||| |||  || |||||||||||||| ||||||||| | |||||||||   ||||| ||||  ||||||||||||| |    
T  20368127 ctactgacataagttttgtaagactatttgggagaacttatgaaaacaacttatgaca-tgttcataagctagtttcaacttattttcataagttctcca 20368225  T
Q  415 agatagcttat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    ||| ||||||| ||||| ||||||| |  ||||||||||||||    
T  20368226 agaaagcttatgaaaacaacttataactcatacaaaaacaatt 20368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 447
Target Start/End: Complemental strand, 24982834 - 24982696
Alignment:
Q  310 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 409  Q
    ||||||||||  |||||||||| ||||||| |||| || ||| | ||| |||||||||||||| |||| || ||| ||||| ||||||   |||||||||    
T  24982834 cttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttatgacatttttaatgagctttttttagcttaccctcataagtt 24982735  T
Q  410 ctctaagatagcttat-aaaaccacttatagcaaataca 447  Q
    ||| || ||| ||||| |||||  ||||||||| |||||    
T  24982734 ctccaaaataacttatgaaaacagcttatagcatataca 24982696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 305 - 406
Target Start/End: Complemental strand, 848122 - 848022
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 404  Q
    ||||||||||||| | ||||||||||| ||||||| |||   | ||||||| ||||| |||||||||| ||||| ||||| ||||||||||||  |||||    
T  848122 ttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaagcttttttcagcttattttcat 848024  T
Q  405 aa 406  Q
    ||    
T  848023 aa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 351 - 459
Target Start/End: Original strand, 9093538 - 9093647
Alignment:
Q  351 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 449  Q
    |||||||||| ||||||||||| | || |||| |  |||||||||||  ||| |||||||||||||| ||||||| |||||  ||||||||  |||| ||    
T  9093538 cttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaa 9093637  T
Q  450 aacaatttaa 459  Q
    ||||||||||    
T  9093638 aacaatttaa 9093647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 4163287 - 4163215
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacactttt 377  Q
    |||||||||||||||||||||||||||| |||||| ||   || ||| |||||||||| ||||||||| ||||    
T  4163287 ttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4163215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 4224908 - 4224836
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacactttt 377  Q
    |||||||||||||||||||||||||||| |||||| ||   || ||| |||||||||| ||||||||| ||||    
T  4224908 ttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4224836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 2735159 - 2735048
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 447  Q
    ||||||||||||| |||||||||| |||||||||||  ||||| |||||  |||||||||| |  ||||| |||||| |||||  |||||||   |||||    
T  2735159 aacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattataca 2735060  T
Q  448 aaaacaatttaa 459  Q
    |||| |||||||    
T  2735059 aaaataatttaa 2735048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 374 - 456
Target Start/End: Complemental strand, 6536680 - 6536597
Alignment:
Q  374 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    ||||||||||| ||||||| ||||  ||||||| ||||| || ||||||| | ||||| |||||||||| ||||||||||||||    
T  6536680 ttttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatatacaaaaacaatt 6536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 389 - 459
Target Start/End: Original strand, 6909892 - 6909963
Alignment:
Q  389 ttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||||| ||||||| ||||| ||||||  |||| ||||| |||||||||| |||||||||||||||||    
T  6909892 ttcagcttaatttcataaattctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaa 6909963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 412
Target Start/End: Original strand, 9912131 - 9912234
Alignment:
Q  309 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 408  Q
    ||||||||||||  |||||||||  | |||| |||  || ||||||||||| |||||||||||| | |||||||||  |||| ||||||  |||||||||    
T  9912131 gcttatctactgatataagttttgggcgactgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagt 9912230  T
Q  409 tctc 412  Q
    ||||    
T  9912231 tctc 9912234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 459
Target Start/End: Complemental strand, 24626422 - 24626274
Alignment:
Q  304 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 403  Q
    |||||||||||||| |  ||| || ||| ||||| | |||  |||||||| ||||||||||||||||| || ||||||| | ||||||||||            
T  24626422 attgagcttatctagtaacatcagctttgtgagaatgtttgggaaaacttttgaaaacagcttatgacgctcttcataaacttttttcagct-------- 24626331  T
Q  404 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    ||| | ||| |||||||||||| ||||| |||||||| | |||||||||||||||||    
T  24626330 taattactccaagatagcttatgaaaacaacttatagaatatacaaaaacaatttaa 24626274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 30926653 - 30926578
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcat 380  Q
    |||||||||| | ||||||||| ||| |||||||| |||   | |||||||||||||||||||||||| |||||||    
T  30926653 ttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaattttcat 30926578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 35070630 - 35070708
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa 427  Q
    |||||| ||||||||||||||||| |||||| |||| |||||  ||||   ||||||||||||| || |||||||||||    
T  35070630 aacttacgaaaacagcttatgacaattttcacaagcttttttgggcttgttttcataagttctccaaaatagcttataa 35070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 456
Target Start/End: Complemental strand, 35099152 - 35099019
Alignment:
Q  323 ataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagct 422  Q
    ||||||||| |||| || |||  || || ||| |||||||||| |||||| ||||| ||||  ||||||| ||||  |||| || | |||||||||||||    
T  35099152 ataagttttctgaggctgtttgggagaatttaggaaaacagctaatgacatttttcgtaagt-tttttcaacttattttcaaaaatactctaagatagct 35099054  T
Q  423 tat-aaaaccacttatagcaaatacaaaaacaatt 456  Q
    ||| ||||| ||||||| || ||||||||||||||    
T  35099053 tatgaaaacaacttataacatatacaaaaacaatt 35099019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 9027568 - 9027508
Alignment:
Q  135 taaaacagtttgactttattttattttttagtgtagaaataactcat-gataagcacttat 194  Q
    |||||||||||||||||||||||| || || |||||||||| || || |||||||||||||    
T  9027568 taaaacagtttgactttattttatcttctattgtagaaatagcttatagataagcacttat 9027508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 384
Target Start/End: Original strand, 9559357 - 9559437
Alignment:
Q  304 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 384  Q
    |||||| ||||||| ||||||||||||| ||||||| |||  || || ||||||||||||||||  ||| | |||||||||    
T  9559357 attgagattatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataagc 9559437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 459
Target Start/End: Complemental strand, 18076290 - 18076175
Alignment:
Q  352 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc-----tct--aagatagcttat-aaaaccacttatagcaaa 443  Q
    |||||||| |||||||||||| ||||||| |||  |||||| |||| ||||||||||||     |||  || ||||||||| ||||| |||||||||||     
T  18076290 ttatgaaaccagcttatgacaattttcatgagctgttttcaacttatattcataagttcttagttcttcaatatagcttataaaaacaacttatagcaat 18076191  T
Q  444 tacaaaaacaatttaa 459  Q
    || |||||||||||||    
T  18076190 tagaaaaacaatttaa 18076175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 30536634 - 30536570
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 372  Q
    ||||||||||||||| |||||||| ||||||| |||  ||  ||||||||||| |||||||||||    
T  30536634 agcttatctactggcgtaagttttgtgagactgtttgggaggacttatgaaaatagcttatgaca 30536570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 901 - 951
Target Start/End: Original strand, 31559483 - 31559535
Alignment:
Q  901 caggaatgataagtaaacacaa-aatacaaacacaaa-atgacaccatacact 951  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  31559483 caggaatgataagtaaacacaataatacaaacataaatatgacaccatacact 31559535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 31624179 - 31624108
Alignment:
Q  349 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 421  Q
    |||||||||||||||||||||||| | |||||||||  |||||| ||||  ||||||| ||||| ||||||||    
T  31624179 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttattttcataatttctccaagatagc 31624108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 397
Target Start/End: Original strand, 19411491 - 19411577
Alignment:
Q  311 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 397  Q
    ||||||||| |||||||||||||  || | |||  || ||||| || ||||||||||||||| || |||||||| |||||| |||||    
T  19411491 ttatctacttgcataagttttatatgaatgtttgggagaacttttgtaaacagcttatgacagttctcataagcttttttcggctta 19411577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 837234 - 837307
Alignment:
Q  387 ttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 459  Q
    |||||||||||  ||||||||||||| ||||||||| || ||||| |||||||||  | || ||||||||||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaa 837307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 31672538 - 31672575
Alignment:
Q  127 atagcttat-aaaacagtttgactttattttatttttt 163  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  31672538 atagcttatgaaaacagtttgactttattttatttttt 31672575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 308 - 425
Target Start/End: Complemental strand, 22362 - 22245
Alignment:
Q  308 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 407  Q
    |||||||||| ||||||||||||| |||| || ||   ||||||||||  ||||||||||||||| ||||| ||||| ||||||||||||  ||||||||    
T  22362 agcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagcttattttcataag 22263  T
Q  408 ttctctaagatagcttat 425  Q
    || || || |||||||||    
T  22262 ttttccaacatagcttat 22245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 918 - 1003
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 390  Q
    |||||||||||||| |||||||||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  918 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 325 - 425
Target Start/End: Complemental strand, 58856 - 58756
Alignment:
Q  325 aagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 424  Q
    ||||||| || |||| |||| ||||| |||||||| ||| |||||||| ||||||||||| ||||||| ||||| ||||||||||||  || ||||||||    
T  58856 aagttttgtgtgactgtttttgaaaatttatgaaagcagtttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagctta 58757  T
Q  425 t 425  Q
    |    
T  58756 t 58756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 372
Target Start/End: Complemental strand, 24755 - 24688
Alignment:
Q  305 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 372  Q
    |||||| |||||| ||||||| ||||| ||||||| |||  || ||||||| ||||||||||||||||    
T  24755 ttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgaca 24688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University