View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5567-Insertion-9 (Length: 207)
Name: NF5567-Insertion-9
Description: NF5567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5567-Insertion-9 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 7292376 - 7292575
Alignment:
| Q |
8 |
acaatattaaggacaaacacaaataattttcctatataactcatttttcatataggaaaatgatgtctatacctgcaacaccatatcattaagagcagta |
107 |
Q |
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| T |
7292376 |
acaatattaaggacaaacacaaataattttcctatataactcatttttcatataggaaaatgatgtctatacctgcaacaccatatcattaagagcagta |
7292475 |
T |
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| Q |
108 |
gccaaaaaatcccaatcgtcgcaacaatattccacgtcacatggatcttcatttcttcttccaaccatcgttagaacaatgcgacccccttcaaccaatt |
207 |
Q |
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| T |
7292476 |
gccaaaaaatcccaatcgtcgcaacaatattccacgtcacatggatcttcatttcttcttccaaccatcgttagaacaatgcgacccccttcaaccaatt |
7292575 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 7297497 - 7297605
Alignment:
| Q |
94 |
cattaagagcagtagccaaaaaatcccaatcgtcgcaacaatattccacgtcacatggatcttcatttcttcttccaaccatcgttagaacaatgcgacc |
193 |
Q |
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| T |
7297497 |
cattaagaacagcagctaaaagctcccaatagtagcaacaatattttatgtcacatggatcttcatttcttcttcctggcattgttagaaccatgcaacc |
7297596 |
T |
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| Q |
194 |
cccttcaac |
202 |
Q |
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| T |
7297597 |
cccttcaac |
7297605 |
T |
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