View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5567_high_11 (Length: 292)
Name: NF5567_high_11
Description: NF5567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5567_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 282
Target Start/End: Original strand, 39496600 - 39496864
Alignment:
| Q |
18 |
tctagttgagaaaagaagcaacaagagaaaaataagagccaataacaaaattaatatgcagagacaataaccaaatttatctccccaacaaaatcttttg |
117 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
39496600 |
tctagttgagaaaagaagcaccaagagaaaaataagagccaataacaaaattaatatgcagagacaataaccaagtttatctccccaacaaaatcttttg |
39496699 |
T |
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| Q |
118 |
ctgtaagagggaattcctttatcaaacttcaaatcttcaaaatatatactaacacctgggtctctcatcctaacctcactatcatgcaacacagaatttg |
217 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39496700 |
ctgtaagtgggaattcctttatcaaacttcaaatcttcaaaatatatactaacacctgggtctctcatcctaacctcactatcatgcaacacagaatttg |
39496799 |
T |
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| Q |
218 |
tgacaccttgaacattgttgtttacataaatgttgatgcaacaacaatcttttgactcacctttg |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39496800 |
tgacaccttgaacattgttgtttacataaatgttgatgcaacaacaatcttttgactcacctttg |
39496864 |
T |
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