View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5567_high_9 (Length: 312)
Name: NF5567_high_9
Description: NF5567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5567_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 34922280 - 34922564
Alignment:
| Q |
13 |
aatattgtctagaatttagttatgtagagttaagaacaacaatagttggcaatagtttttaattaattaacattctcaaaccttaaccatgaaattgaat |
112 |
Q |
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| T |
34922280 |
aatattgtctagaatttagttatgtagagttaagaacaacaatagttggcaatagtttttaattaattaacattctcaaaccttaaccatgaaattgaat |
34922379 |
T |
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| Q |
113 |
ggcctaacatctaattaaggcatcttgaaccacataggacaagttgtgtagataaaaagggctttcaatgtactaatatcattgtgccattattgaaagc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34922380 |
ggcctaacatctaattaaggcatcttgaaccacataggacaagttgtgtagataaaaagggctttcaatgtactaatatcattgtgccattattgaaagc |
34922479 |
T |
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| Q |
213 |
aagagatgatgcaaagctttgataggacacttgttcgttagtgctcataaattaggtaaagtgtttaccttgagatgaaatatgt |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34922480 |
aagagatgatgcaaagctttgataggacacttgttcgttagtgctcataaattaggtaaagtgtttaccttgagatgaaatatgt |
34922564 |
T |
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