View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5569_high_2 (Length: 602)
Name: NF5569_high_2
Description: NF5569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5569_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 532; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 15 - 587
Target Start/End: Complemental strand, 45068910 - 45068338
Alignment:
| Q |
15 |
atcaatattccttccttgaactaaggtattgccgataagggcacttcacacacacagtaacccctttcccttccagtgcattgatttgaacaatcaatgc |
114 |
Q |
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| T |
45068910 |
atcaatattccttccttgaactaaggtattgccgataagggcacttcacactcacagtaacccctttcccttccagtgcattgatttgaacaatcaatgc |
45068811 |
T |
|
| Q |
115 |
aattggttttggcctcattcatggtgatgattctccacttagaacaagagacaaaacattggcctacaagtagcacgaactcatcactcatcaaaacaga |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068810 |
aattggttttggcctcattcatggtgatgattctccacttagaacaagagacaaaacattggcctacaagtagcacgaactcatcactcatcaaaacaga |
45068711 |
T |
|
| Q |
215 |
acttgtcattgagtattgaccaaatacaatttcttttaacattaattgttgatattcnnnnnnnataggcaaatgttagtgattaattagttaagaggag |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
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| T |
45068710 |
acttgtcattgagtattgaccaaatacaatttcttttaacattaattgttgatattctttttttataggcaaatgttagtgattaattagttaaggggag |
45068611 |
T |
|
| Q |
315 |
ggagaaatgtttgtcgcagggatcgaactctgaacttgctacatagaactccttcggtttcctaacccttatcattgggctacaccgtcgaagacattgt |
414 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
45068610 |
ggagaaatgtttgtcgcagggatcgaactctgaacttgctacatagaactccttcggtttcctaacccttatcattgggctacaccgtcaaagacattgt |
45068511 |
T |
|
| Q |
415 |
cgatatttgtttgacgtatactaacctcaacctcaacctctaagcaaagagattgagacttgatccaataactttcatgcctatgctatataccctacaa |
514 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068510 |
cgatatttgtttgacgtatactaacctcaacctcaacctcaaagcgaagagattgagacttgatccaataactttcatgcctatgctatataccctacaa |
45068411 |
T |
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| Q |
515 |
tgttatccatttgataggcatggtgatagtacttgcagacaaatacattgaccctatatcatatcctattatt |
587 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068410 |
tgttatccatttgataggcatggtgatagtacttgcagacaaatacattgaccctatatcatatcctattatt |
45068338 |
T |
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