View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5569_high_5 (Length: 487)
Name: NF5569_high_5
Description: NF5569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5569_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 35641715 - 35641885
Alignment:
| Q |
36 |
tgtccacaatttatggtggagacccaaacgtatagagcaacaacttaggcaacaaggggtgagaggaacttcctacaagttttggtatggtgacttacca |
135 |
Q |
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| T |
35641715 |
tgtccacaatttatggtggagacccaaacgtatagagcaacaacttaggtaacaaggggtgagaggaacttcctacaagttttggtatggtgacttacca |
35641814 |
T |
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| Q |
136 |
cagatgataaagtcttctcgtgaagcatccttatctaaacccttgtccttgaaccaccaaaatatcgttcc |
206 |
Q |
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| T |
35641815 |
cagatgataaagtcttctcgtgaagcatccttatctaaatccttgaccttgaaccaccaaaatatcgttcc |
35641885 |
T |
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