View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5570_high_23 (Length: 228)

Name: NF5570_high_23
Description: NF5570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5570_high_23
NF5570_high_23
[»] chr8 (60 HSPs)
chr8 (1-129)||(39723968-39724097)
chr8 (1-129)||(13026640-13026769)
chr8 (1-106)||(39723429-39723536)
chr8 (1-129)||(9823281-9823410)
chr8 (1-129)||(22851395-22851524)
chr8 (3-129)||(9822753-9822880)
chr8 (18-129)||(13027219-13027330)
chr8 (1-129)||(13937310-13937438)
chr8 (1-99)||(3307372-3307472)
chr8 (1-129)||(13936728-13936853)
chr8 (1-99)||(6092809-6092908)
chr8 (80-134)||(15156062-15156116)
chr8 (1-129)||(15042150-15042278)
chr8 (81-134)||(37752237-37752290)
chr8 (80-134)||(12281247-12281301)
chr8 (81-134)||(41662281-41662334)
chr8 (81-134)||(43245994-43246047)
chr8 (1-64)||(22851906-22851970)
chr8 (79-134)||(9465695-9465750)
chr8 (79-134)||(18019910-18019965)
chr8 (83-134)||(43162417-43162468)
chr8 (80-134)||(765857-765911)
chr8 (80-134)||(34313941-34313995)
chr8 (34-134)||(7127779-7127882)
chr8 (28-129)||(41662350-41662452)
chr8 (28-129)||(43245876-43245978)
chr8 (51-99)||(15442797-15442845)
chr8 (81-129)||(16929067-16929115)
chr8 (51-99)||(34498156-34498204)
chr8 (28-98)||(37396743-37396814)
chr8 (28-105)||(6199044-6199122)
chr8 (28-105)||(9623530-9623608)
chr8 (28-105)||(24473716-24473794)
chr8 (28-105)||(33727053-33727131)
chr8 (79-134)||(33748160-33748217)
chr8 (28-99)||(6198692-6198764)
chr8 (55-99)||(20861614-20861658)
chr8 (55-99)||(25439102-25439146)
chr8 (43-129)||(765739-765825)
chr8 (79-129)||(12281426-12281475)
chr8 (51-129)||(15155888-15155965)
chr8 (57-99)||(15444625-15444667)
chr8 (80-134)||(22786933-22786987)
chr8 (28-105)||(34498503-34498581)
chr8 (71-129)||(37752089-37752146)
chr8 (55-105)||(41662549-41662599)
chr8 (81-134)||(11007654-11007707)
chr8 (82-134)||(74864-74916)
chr8 (28-99)||(17431321-17431393)
chr8 (90-134)||(43597913-43597957)
chr8 (43-129)||(12281129-12281215)
chr8 (28-129)||(15156132-15156234)
chr8 (79-129)||(23123517-23123564)
chr8 (79-129)||(16928947-16928996)
chr8 (79-129)||(16929242-16929291)
chr8 (55-105)||(24473371-24473421)
chr8 (55-105)||(37397121-37397171)
chr8 (79-129)||(37752416-37752465)
chr8 (79-129)||(43246176-43246225)
chr8 (200-228)||(15156182-15156210)
[»] chr7 (58 HSPs)
chr7 (1-129)||(44599494-44599623)
chr7 (1-106)||(13863340-13863447)
chr7 (1-129)||(13863878-13864005)
chr7 (18-129)||(44600073-44600184)
chr7 (1-99)||(8643687-8643786)
chr7 (80-134)||(9412202-9412256)
chr7 (81-134)||(13772793-13772846)
chr7 (1-129)||(46816232-46816360)
chr7 (80-134)||(3687534-3687588)
chr7 (80-134)||(6908391-6908445)
chr7 (28-105)||(10533062-10533140)
chr7 (28-105)||(37888861-37888939)
chr7 (28-99)||(18864001-18864073)
chr7 (28-99)||(20419272-20419344)
chr7 (28-99)||(22740190-22740262)
chr7 (55-105)||(9035269-9035319)
chr7 (79-129)||(18925229-18925279)
chr7 (55-105)||(20418916-20418966)
chr7 (55-105)||(37889235-37889285)
chr7 (55-105)||(37971988-37972038)
chr7 (55-105)||(37972372-37972422)
chr7 (81-134)||(33628501-33628554)
chr7 (28-99)||(3205041-3205113)
chr7 (55-99)||(13741591-13741635)
chr7 (55-99)||(13744209-13744253)
chr7 (35-134)||(15567120-15567220)
chr7 (28-99)||(17157001-17157073)
chr7 (55-99)||(22740567-22740611)
chr7 (28-129)||(3687604-3687705)
chr7 (43-129)||(9412288-9412374)
chr7 (1-99)||(46815202-46815301)
chr7 (55-105)||(3204695-3204745)
chr7 (82-132)||(5349641-5349691)
chr7 (79-129)||(9412028-9412077)
chr7 (28-105)||(18864350-18864428)
chr7 (83-129)||(27096170-27096216)
chr7 (83-129)||(27182087-27182133)
chr7 (28-105)||(29292950-29293028)
chr7 (28-105)||(29293294-29293372)
chr7 (28-105)||(36527746-36527824)
chr7 (57-99)||(48359353-48359395)
chr7 (81-129)||(38191388-38191435)
chr7 (28-99)||(48359606-48359678)
chr7 (80-127)||(5735382-5735429)
chr7 (28-105)||(9034895-9034974)
chr7 (79-134)||(34235855-34235910)
chr7 (83-134)||(35080132-35080183)
chr7 (28-105)||(42418976-42419055)
chr7 (79-129)||(13772901-13772950)
chr7 (72-106)||(18925315-18925349)
chr7 (55-105)||(42418619-42418669)
chr7 (72-129)||(13772646-13772702)
chr7 (79-108)||(15567017-15567046)
chr7 (72-129)||(33628653-33628709)
chr7 (71-116)||(35080215-35080259)
chr7 (70-106)||(5349724-5349760)
chr7 (85-129)||(23686723-23686766)
chr7 (28-99)||(38826861-38826933)
[»] chr6 (33 HSPs)
chr6 (1-129)||(33829556-33829685)
chr6 (18-129)||(33828995-33829106)
chr6 (81-134)||(3403867-3403920)
chr6 (81-134)||(30388242-30388295)
chr6 (79-134)||(2762606-2762661)
chr6 (79-134)||(10039843-10039898)
chr6 (80-134)||(18242033-18242087)
chr6 (80-134)||(33972190-33972244)
chr6 (28-129)||(3403936-3404038)
chr6 (79-134)||(11656603-11656658)
chr6 (28-105)||(10087806-10087884)
chr6 (28-105)||(33974247-33974325)
chr6 (79-134)||(13579528-13579583)
chr6 (80-134)||(33658563-33658617)
chr6 (72-129)||(3403722-3403778)
chr6 (28-129)||(30388311-30388411)
chr6 (55-105)||(32733972-32734022)
chr6 (28-99)||(7654496-7654568)
chr6 (28-106)||(18242103-18242183)
chr6 (43-106)||(21032005-21032069)
chr6 (79-127)||(21032107-21032155)
chr6 (57-105)||(29074350-29074398)
chr6 (57-105)||(29079114-29079162)
chr6 (57-105)||(29106923-29106971)
chr6 (86-129)||(31598157-31598200)
chr6 (86-129)||(31598641-31598684)
chr6 (79-129)||(10039681-10039729)
chr6 (83-129)||(12714436-12714481)
chr6 (79-129)||(18241859-18241908)
chr6 (43-107)||(2762509-2762574)
chr6 (55-99)||(2354786-2354830)
chr6 (200-228)||(21032130-21032158)
chr6 (55-99)||(22755065-22755109)
[»] chr2 (54 HSPs)
chr2 (1-106)||(7591228-7591334)
chr2 (1-106)||(26842158-26842265)
chr2 (1-129)||(2639402-2639531)
chr2 (1-129)||(26841592-26841721)
chr2 (18-106)||(18296103-18296192)
chr2 (18-106)||(2638847-2638936)
chr2 (1-99)||(7591770-7591870)
chr2 (80-134)||(32673020-32673074)
chr2 (81-134)||(11883746-11883799)
chr2 (80-134)||(6171334-6171388)
chr2 (80-134)||(20347341-20347395)
chr2 (80-134)||(30191046-30191100)
chr2 (36-134)||(40221443-40221543)
chr2 (1-64)||(18296642-18296707)
chr2 (80-129)||(26737657-26737706)
chr2 (19-99)||(38490780-38490861)
chr2 (81-134)||(40469607-40469660)
chr2 (43-129)||(24832336-24832422)
chr2 (28-129)||(40469676-40469778)
chr2 (28-105)||(8851176-8851254)
chr2 (80-134)||(15920912-15920966)
chr2 (28-105)||(26692768-26692846)
chr2 (36-105)||(37720232-37720301)
chr2 (28-99)||(7664282-7664354)
chr2 (28-99)||(7664621-7664693)
chr2 (58-105)||(7979982-7980029)
chr2 (79-134)||(17345854-17345909)
chr2 (28-129)||(30190928-30191030)
chr2 (44-129)||(11883890-11883975)
chr2 (55-105)||(16910855-16910905)
chr2 (28-105)||(16911217-16911295)
chr2 (28-105)||(17851350-17851428)
chr2 (55-99)||(7979599-7979643)
chr2 (55-99)||(8851558-8851602)
chr2 (55-99)||(18750102-18750146)
chr2 (55-99)||(26692430-26692474)
chr2 (43-129)||(11883628-11883714)
chr2 (28-105)||(19141797-19141875)
chr2 (55-129)||(41790888-41790961)
chr2 (56-105)||(6324945-6324994)
chr2 (55-99)||(41790524-41790568)
chr2 (31-105)||(6325298-6325373)
chr2 (79-134)||(18055166-18055221)
chr2 (43-129)||(20347427-20347513)
chr2 (28-129)||(32673090-32673191)
chr2 (51-106)||(40469454-40469509)
chr2 (79-134)||(43495484-43495538)
chr2 (55-105)||(5793475-5793525)
chr2 (55-105)||(17851006-17851055)
chr2 (71-129)||(18296685-18296742)
chr2 (51-129)||(30191197-30191274)
chr2 (51-129)||(32672847-32672924)
chr2 (27-99)||(5379906-5379979)
chr2 (200-228)||(43495481-43495509)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-106)||(6715-6822)
scaffold0328 (1-106)||(6179-6285)
[»] chr4 (65 HSPs)
chr4 (1-129)||(36096395-36096524)
chr4 (1-129)||(50679344-50679473)
chr4 (1-99)||(43050641-43050741)
chr4 (18-129)||(50678784-50678895)
chr4 (1-106)||(36095844-36095950)
chr4 (1-106)||(43051172-43051279)
chr4 (1-99)||(45830118-45830216)
chr4 (1-129)||(56505698-56505827)
chr4 (1-106)||(47219125-47219228)
chr4 (1-129)||(56506494-56506623)
chr4 (28-129)||(16555764-16555866)
chr4 (80-134)||(11241567-11241621)
chr4 (81-134)||(16555695-16555748)
chr4 (82-134)||(22681702-22681754)
chr4 (79-134)||(49178639-49178694)
chr4 (80-130)||(3930357-3930407)
chr4 (28-105)||(4239314-4239392)
chr4 (80-134)||(13198727-13198781)
chr4 (79-133)||(27304893-27304947)
chr4 (28-105)||(32703598-32703676)
chr4 (82-134)||(35393599-35393651)
chr4 (51-134)||(5206107-5206190)
chr4 (1-99)||(45829028-45829127)
chr4 (80-134)||(8488307-8488361)
chr4 (28-105)||(28196374-28196452)
chr4 (28-105)||(28196721-28196799)
chr4 (29-105)||(25161906-25161983)
chr4 (15-99)||(39744400-39744485)
chr4 (40-106)||(11529195-11529262)
chr4 (55-105)||(169042-169092)
chr4 (79-129)||(8181996-8182046)
chr4 (28-105)||(9380335-9380413)
chr4 (28-105)||(9380689-9380767)
chr4 (44-129)||(16555520-16555605)
chr4 (51-129)||(23432481-23432559)
chr4 (15-99)||(293152-293237)
chr4 (55-99)||(169415-169459)
chr4 (28-99)||(9023628-9023700)
chr4 (28-99)||(39744064-39744136)
chr4 (55-99)||(43292071-43292115)
chr4 (28-129)||(3930427-3930528)
chr4 (71-129)||(5206222-5206278)
chr4 (79-129)||(8182172-8182222)
chr4 (55-105)||(9023272-9023322)
chr4 (28-105)||(23539867-23539945)
chr4 (55-105)||(26207388-26207438)
chr4 (55-105)||(26207722-26207772)
chr4 (28-105)||(32703253-32703331)
chr4 (28-105)||(39086571-39086649)
chr4 (55-105)||(43292333-43292383)
chr4 (55-105)||(44468899-44468949)
chr4 (55-105)||(48406361-48406411)
chr4 (45-129)||(18077167-18077251)
chr4 (28-99)||(23540200-23540272)
chr4 (28-99)||(25162261-25162333)
chr4 (51-106)||(39415251-39415306)
chr4 (31-105)||(48405989-48406064)
chr4 (79-129)||(8488482-8488530)
chr4 (79-129)||(13198906-13198955)
chr4 (27-129)||(23433433-23433534)
chr4 (80-134)||(24775641-24775695)
chr4 (82-134)||(7603296-7603348)
chr4 (200-228)||(22681603-22681631)
chr4 (55-99)||(39912463-39912507)
chr4 (79-134)||(54508997-54509050)
[»] chr1 (62 HSPs)
chr1 (1-129)||(6002813-6002943)
chr1 (1-106)||(49284975-49285082)
chr1 (18-129)||(49284414-49284525)
chr1 (1-129)||(6002242-6002371)
chr1 (80-134)||(17518481-17518535)
chr1 (28-129)||(39691948-39692049)
chr1 (80-134)||(47955429-47955483)
chr1 (81-134)||(22149580-22149633)
chr1 (80-134)||(8108899-8108953)
chr1 (80-134)||(41083031-41083085)
chr1 (28-129)||(48105064-48105165)
chr1 (28-105)||(9347154-9347232)
chr1 (28-105)||(13918474-13918552)
chr1 (28-105)||(27172143-27172221)
chr1 (28-129)||(28633725-28633826)
chr1 (28-129)||(48104683-48104784)
chr1 (28-105)||(50526420-50526498)
chr1 (28-105)||(27172490-27172567)
chr1 (28-99)||(6703494-6703566)
chr1 (28-99)||(20480201-20480273)
chr1 (28-99)||(26814728-26814800)
chr1 (28-99)||(26815067-26815139)
chr1 (28-106)||(44911052-44911131)
chr1 (28-129)||(47955311-47955413)
chr1 (28-105)||(9347499-9347577)
chr1 (55-105)||(32163019-32163069)
chr1 (55-129)||(42611190-42611263)
chr1 (28-105)||(46823871-46823949)
chr1 (55-105)||(50429684-50429734)
chr1 (55-105)||(50430057-50430107)
chr1 (28-104)||(999473-999550)
chr1 (1-64)||(48191305-48191369)
chr1 (28-99)||(28634105-28634177)
chr1 (28-99)||(50615569-50615641)
chr1 (28-99)||(50623397-50623469)
chr1 (28-129)||(22149649-22149748)
chr1 (83-134)||(31848016-31848067)
chr1 (55-105)||(6703870-6703920)
chr1 (71-129)||(8108985-8109042)
chr1 (55-105)||(46824254-46824304)
chr1 (28-105)||(49318114-49318192)
chr1 (1-64)||(48190811-48190876)
chr1 (55-99)||(999145-999189)
chr1 (57-105)||(4692411-4692459)
chr1 (55-99)||(20371072-20371116)
chr1 (51-107)||(24671282-24671338)
chr1 (27-129)||(31847900-31848002)
chr1 (82-134)||(46057016-46057068)
chr1 (27-129)||(19008697-19008799)
chr1 (58-105)||(20480591-20480638)
chr1 (79-129)||(13589659-13589707)
chr1 (55-105)||(13918843-13918893)
chr1 (51-129)||(17518308-17518384)
chr1 (55-105)||(44911413-44911463)
chr1 (51-129)||(47955580-47955657)
chr1 (71-129)||(48190776-48190833)
chr1 (28-105)||(49317779-49317857)
chr1 (57-99)||(49318421-49318463)
chr1 (28-91)||(33085713-33085775)
chr1 (55-99)||(21687059-21687103)
chr1 (57-105)||(21687445-21687493)
chr1 (55-99)||(42611590-42611634)
[»] chr5 (58 HSPs)
chr5 (1-129)||(18817531-18817660)
chr5 (1-106)||(18816979-18817086)
chr5 (1-106)||(11350835-11350941)
chr5 (1-106)||(11351349-11351454)
chr5 (81-134)||(18433138-18433191)
chr5 (80-134)||(25115880-25115934)
chr5 (80-134)||(25174972-25175026)
chr5 (82-134)||(34576988-34577040)
chr5 (28-129)||(18433020-18433122)
chr5 (82-134)||(26020573-26020625)
chr5 (28-99)||(42919338-42919410)
chr5 (28-129)||(26020455-26020557)
chr5 (28-105)||(12498595-12498673)
chr5 (28-105)||(19514554-19514632)
chr5 (28-105)||(22729388-22729466)
chr5 (79-134)||(5187645-5187700)
chr5 (83-134)||(5779742-5779793)
chr5 (36-105)||(2817177-2817247)
chr5 (28-105)||(3888267-3888345)
chr5 (28-105)||(3888610-3888688)
chr5 (28-105)||(12498876-12498954)
chr5 (55-105)||(21207254-21207304)
chr5 (55-105)||(26571140-26571190)
chr5 (55-105)||(37610594-37610644)
chr5 (55-105)||(37780718-37780768)
chr5 (55-105)||(43463783-43463833)
chr5 (56-129)||(31569912-31569983)
chr5 (28-99)||(26570763-26570835)
chr5 (28-99)||(34147173-34147245)
chr5 (28-99)||(43464140-43464212)
chr5 (54-129)||(5187805-5187879)
chr5 (79-134)||(9869738-9869793)
chr5 (28-99)||(22729041-22729112)
chr5 (28-129)||(25115762-25115864)
chr5 (28-129)||(25174854-25174956)
chr5 (57-99)||(10098919-10098961)
chr5 (55-105)||(11316950-11317000)
chr5 (51-129)||(25175123-25175200)
chr5 (55-105)||(37610229-37610279)
chr5 (55-105)||(37780347-37780397)
chr5 (85-134)||(12441196-12441245)
chr5 (28-99)||(19514911-19514983)
chr5 (55-99)||(25940555-25940599)
chr5 (28-99)||(34147458-34147530)
chr5 (83-134)||(9665649-9665700)
chr5 (81-128)||(16726084-16726130)
chr5 (71-106)||(22428960-22428995)
chr5 (71-106)||(22429188-22429223)
chr5 (83-134)||(23011261-23011312)
chr5 (79-129)||(18433316-18433365)
chr5 (79-129)||(25116061-25116110)
chr5 (55-105)||(25940990-25941040)
chr5 (71-129)||(34577156-34577212)
chr5 (80-121)||(23011091-23011131)
chr5 (71-107)||(5187577-5187613)
chr5 (55-99)||(10098553-10098597)
chr5 (55-99)||(41072190-41072234)
chr5 (79-107)||(41383167-41383195)
[»] chr3 (54 HSPs)
chr3 (1-106)||(1928354-1928461)
chr3 (80-134)||(10293730-10293784)
chr3 (80-134)||(20968897-20968951)
chr3 (81-134)||(18875012-18875065)
chr3 (28-99)||(8314047-8314119)
chr3 (82-134)||(9026855-9026907)
chr3 (6-99)||(10771537-10771629)
chr3 (28-105)||(27238848-27238926)
chr3 (28-105)||(48159925-48160003)
chr3 (51-99)||(21896483-21896531)
chr3 (28-99)||(42673244-42673316)
chr3 (79-134)||(13657621-13657676)
chr3 (32-129)||(47871073-47871170)
chr3 (55-105)||(10348775-10348825)
chr3 (51-129)||(18875163-18875240)
chr3 (28-105)||(27238493-27238571)
chr3 (28-105)||(40848548-40848626)
chr3 (55-105)||(48160309-48160359)
chr3 (82-131)||(4947384-4947433)
chr3 (81-134)||(45060774-45060826)
chr3 (1-64)||(1927812-1927875)
chr3 (55-99)||(22429572-22429616)
chr3 (55-99)||(26007215-26007259)
chr3 (55-99)||(42456171-42456215)
chr3 (28-99)||(53687922-53687994)
chr3 (55-99)||(53766197-53766241)
chr3 (79-134)||(1101090-1101144)
chr3 (79-134)||(3644720-3644775)
chr3 (79-134)||(17372473-17372528)
chr3 (80-131)||(18874885-18874935)
chr3 (28-129)||(20968967-20969068)
chr3 (58-105)||(24485049-24485096)
chr3 (15-105)||(42673005-42673096)
chr3 (55-105)||(3353527-3353577)
chr3 (71-129)||(17372303-17372360)
chr3 (55-105)||(24485436-24485486)
chr3 (55-105)||(40848937-40848987)
chr3 (28-105)||(47666283-47666361)
chr3 (28-105)||(53688251-53688329)
chr3 (58-99)||(3353161-3353202)
chr3 (82-134)||(14015873-14015926)
chr3 (77-129)||(3644781-3644832)
chr3 (28-99)||(36180588-36180660)
chr3 (57-105)||(36180968-36181016)
chr3 (28-106)||(22429185-22429264)
chr3 (79-129)||(10293909-10293958)
chr3 (72-106)||(14015957-14015991)
chr3 (80-134)||(17440880-17440934)
chr3 (51-129)||(20968723-20968800)
chr3 (28-105)||(26007567-26007645)
chr3 (28-99)||(10293642-10293715)
chr3 (84-129)||(47871005-47871049)
chr3 (200-228)||(1101087-1101115)
chr3 (200-228)||(10293637-10293665)
[»] scaffold0802 (3 HSPs)
scaffold0802 (80-134)||(1297-1351)
scaffold0802 (28-129)||(1367-1469)
scaffold0802 (51-129)||(1123-1200)
[»] scaffold0319 (3 HSPs)
scaffold0319 (81-134)||(6575-6628)
scaffold0319 (28-129)||(6644-6745)
scaffold0319 (79-129)||(6399-6448)
[»] scaffold0192 (2 HSPs)
scaffold0192 (81-134)||(25247-25300)
scaffold0192 (28-129)||(25316-25418)
[»] scaffold0110 (2 HSPs)
scaffold0110 (80-134)||(45684-45738)
scaffold0110 (28-129)||(45754-45855)
[»] scaffold0001 (5 HSPs)
scaffold0001 (83-134)||(439021-439072)
scaffold0001 (51-129)||(438935-439012)
scaffold0001 (83-134)||(183544-183595)
scaffold0001 (51-129)||(439173-439248)
scaffold0001 (43-129)||(183626-183711)
[»] scaffold1221 (1 HSPs)
scaffold1221 (80-134)||(1604-1658)
[»] scaffold0002 (2 HSPs)
scaffold0002 (88-134)||(412044-412090)
scaffold0002 (200-228)||(411951-411979)
[»] scaffold0598 (1 HSPs)
scaffold0598 (77-134)||(6749-6806)
[»] scaffold0460 (2 HSPs)
scaffold0460 (28-99)||(364-436)
scaffold0460 (55-105)||(739-789)
[»] scaffold0176 (1 HSPs)
scaffold0176 (55-105)||(19648-19698)
[»] scaffold0017 (2 HSPs)
scaffold0017 (55-105)||(185250-185300)
scaffold0017 (28-96)||(184876-184945)
[»] scaffold0041 (2 HSPs)
scaffold0041 (28-105)||(38643-38721)
scaffold0041 (55-99)||(38285-38329)
[»] scaffold0015 (1 HSPs)
scaffold0015 (80-134)||(16976-17030)
[»] scaffold0069 (1 HSPs)
scaffold0069 (55-99)||(50107-50151)
[»] scaffold0035 (1 HSPs)
scaffold0035 (74-134)||(73086-73146)
[»] scaffold0029 (1 HSPs)
scaffold0029 (28-105)||(9933-10012)
[»] scaffold0376 (1 HSPs)
scaffold0376 (77-129)||(7460-7510)


Alignment Details
Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 39723968 - 39724097
Alignment:
Q  1 tcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39723968 tcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 39724067  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  39724068 tggc-aaaagataggggtgaaaagtgcaatt 39724097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13026769 - 13026640
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  13026769 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgaggtgcaaaatcgcacaat 13026670  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  13026669 tggc-aaaagataggggtgaaaagtgcaatt 13026640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39723536 - 39723429
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  39723536 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgggatgcaaaatcgcacaat 39723437  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  39723436 tggcaaaa 39723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 9823281 - 9823410
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||  |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9823281 tcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 9823380  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  9823381 tggc-aaaagataggggtgaaaagtgcaatt 9823410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22851524 - 22851395
Alignment:
Q  1 tcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  22851524 tcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaat 22851425  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | |  |||||||| |||  ||||||||||||    
T  22851424 t-gacaaaagataggggtgaaaagtgcaatt 22851395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 9822880 - 9822753
Alignment:
Q  3 atcactaaaacacatggg-ggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatta 100  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||     
T  9822880 atcactaaaacacatgggtggcctccaaatcagaaagggggaaaaagatatggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt- 9822782  T
Q  101 gcaaaaagataaggggcaaaagtgcaatt 129  Q
    |  |||||||| |||  ||||||||||||    
T  9822781 gataaaagataggggtgaaaagtgcaatt 9822753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 13027219 - 13027330
Alignment:
Q  18 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataagggg 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||     
T  13027219 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggc-aaaagataggggt 13027317  T
Q  117 caaaagtgcaatt 129  Q
     ||||||||||||    
T  13027318 gaaaagtgcaatt 13027330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 13937310 - 13937438
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  13937310 tcatcactaaaacacatgggggccttcaaaccagaaagggggaaaaggatgaggtgcaaaatcactcgtttaaaaacatggggtgcaaattcgcacaatt 13937409  T
Q  100 agcaaaaagataaggggcaaaagtgcaatt 129  Q
      |||||| ||| |||| ||||||||||||    
T  13937410 gacaaaaa-ataggggggaaaagtgcaatt 13937438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3307472 - 3307372
Alignment:
Q  1 tcatcactaaaacacat-gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||    
T  3307472 tcatcactaaaacacatagggggcctccaaatcagaaagggagaaaaagatggggtgcaaaatcgcttgtttaaaaatatgggatgcaaaatcgcacaat 3307373  T
Q  99 t 99  Q
    |    
T  3307372 t 3307372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13936853 - 13936728
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||| |||| | ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  13936853 tcatcactaaaacatatggag-ccttcaaatcagaaa-ggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaatt 13936756  T
Q  100 agcaaaaagataaggggcaaaagtgcaatt 129  Q
     |  ||||||| ||||| ||||||||||||    
T  13936755 -ggtaaaagat-agggggaaaagtgcaatt 13936728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6092908 - 6092809
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||| ||  ||||||| ||||| |||||||||||||||||    
T  6092908 tcatcactaaaacacatgggggcctttaaatctgaaaaggggaaaaagatggggtgcaaaatcgttcaattaaaaatatgggatgcaaaatcgcacaatt 6092809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 15156062 - 15156116
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15156062 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 15156116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15042278 - 15042150
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatgg-gtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||| ||||||| |||| |||  |||||||||| |||||||| ||||| |||||||||||||| |||||||  || |||||||||||| |||||||    
T  15042278 tcatcactgaaacacacggggaccttgaaatcagaaagggggaaaatgatggcgtgcaaaatcgctcatttaaaacaatagggtgcaaaatcacacaatt 15042179  T
Q  100 agcaaaaagataaggggcaaaagtgcaatt 129  Q
     || |||||||||||||  |||||||||||    
T  15042178 ggc-aaaagataaggggggaaagtgcaatt 15042150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 37752290 - 37752237
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37752290 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 37752237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 12281301 - 12281247
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12281301 gggtgcaaaatcgcacagttagcaaaaagataaggggcaaaagtgcaattgaaca 12281247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 41662281 - 41662334
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41662281 ggtgtaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 41662334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 43246047 - 43245994
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43246047 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaattgaaca 43245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22851906 - 22851970
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgc 64  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  22851906 tcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagacgaggtgcaaaatcgc 22851970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 9465750 - 9465695
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  9465750 ggggtgcaaaatcgcacagttagcaaaaagatagggggcaaaagtgcaattgaaca 9465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 18019965 - 18019910
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18019965 ggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaattgaaca 18019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 43162417 - 43162468
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43162417 tgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaaca 43162468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 765911 - 765857
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  765911 gggtgcaaaatcgcacggttagcaaaaagataaggggcaaaagtgcaattgaaca 765857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 34313941 - 34313995
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  34313941 gggtgcaaaatcgtacaattagcaaaaagataagggacaaaagtgcaattgaaca 34313995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 7127779 - 7127882
Alignment:
Q  34 gaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaa--acatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattg 130  Q
    ||||| ||| |||||||||| ||||||||||||| |  ||||  | ||||||||||||||| | ||||||||||||||||| |||| |||||||||||||    
T  7127779 gaaaatgggcaaaagatggggtgcaaaatcgctcataaaaaagaagatggggtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaattg 7127878  T
Q  131 aaca 134  Q
    ||||    
T  7127879 aaca 7127882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 41662350 - 41662452
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||  | ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||    
T  41662350 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgc 41662448  T
Q  126 aatt 129  Q
    ||||    
T  41662449 aatt 41662452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 43245978 - 43245876
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||  | ||||| | |||||||||||||||||||||| | |||||||| |||| ||||||||    
T  43245978 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatc-aaaagatagggggaaaaagtgc 43245880  T
Q  126 aatt 129  Q
    ||||    
T  43245879 aatt 43245876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 15442845 - 15442797
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  15442845 gggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatcacacaatt 15442797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 16929115 - 16929067
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  16929115 ggtgcaaaatctcacaattaacaaaaagataaggggcaaaagtgcaatt 16929067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 34498204 - 34498156
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  34498204 gggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 34498156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 37396814 - 37396743
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  37396814 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaat 37396743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 6199044 - 6199122
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  6199044 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 6199122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9623608 - 9623530
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||| |||||||  || ||| ||||||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  9623608 aaatcagaaaaagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 9623530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 24473716 - 24473794
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  24473716 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 24473794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 33727053 - 33727131
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||  ||||||||||||||||||||||||    
T  33727053 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaa 33727131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 33748160 - 33748217
Alignment:
Q  79 ggggtgcaaaatcgcacaattagc--aaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  33748160 ggggtgcaaaatcgcacaattagcaaaaaaaaatagggggcaaaagtgcaattgaaca 33748217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 6198764 - 6198692
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  || ||||||||||||||||||||    
T  6198764 aaatcagaaatggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaatt 6198692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 20861614 - 20861658
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  20861614 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 20861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 25439102 - 25439146
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  25439102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 25439146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 765825 - 765739
Alignment:
Q  43 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  765825 aaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgcaatt 765739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 12281426 - 12281475
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  12281426 ggggtgcaaaatcgcacaattaac-aaaagataagggggaaaagtgcaatt 12281475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 15155965 - 15155888
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  15155965 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 15155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 15444625 - 15444667
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  15444625 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 15444667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 22786987 - 22786933
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||| |  |||| ||||||||||||||||||||||| ||||    
T  22786987 gggtgcaaaatcgcacaactgacaaatagataaggggcaaaagtgcaattaaaca 22786933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 34498503 - 34498581
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||| || ||| ||| |||| || ||||||||  ||||||||||||||||||||||| |||||    
T  34498503 aaatcagaaagggggaaaaatatagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaatttgcaaa 34498581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 37752146 - 37752089
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||| |||||||||||||||||||||||||| |||| ||| |||| ||||||||||||    
T  37752146 aaaaagatggggtgcaaaatcgcacaattagc-aaaacataggggggaaaagtgcaatt 37752089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 41662599 - 41662549
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  41662599 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 41662549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 11007707 - 11007654
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||| |||||||||||||| ||||||||||| || |||||||||||||| ||||    
T  11007707 ggtgtaaaatcgcacaattggcaaaaagatagggagcaaaagtgcaattaaaca 11007654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 74864 - 74916
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||  |||||||||| ||| ||||||||||||| ||||    
T  74864 gtgcaaaatcgcacaattgacaaaaagataggggacaaaagtgcaattaaaca 74916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 17431393 - 17431321
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||| |||| ||||||||||||||    
T  17431393 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaatt 17431321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 43597957 - 43597913
Alignment:
Q  90 tcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||    
T  43597957 tcgcacaattagcaaaaagatagggggcaaaagcacaattgaaca 43597913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 12281215 - 12281129
Alignment:
Q  43 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||| |||||||||||||    ||||| | | ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  12281215 aaaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgcaatt 12281129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 15156132 - 15156234
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| ||||||||||||     ||||| | ||||||||||||||||||||| |  |||||||| |||| ||||||||    
T  15156132 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaatt-gacaaaagataggggggaaaagtgc 15156230  T
Q  126 aatt 129  Q
    ||||    
T  15156231 aatt 15156234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 23123517 - 23123564
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  23123517 ggggtgcaaaatcgcacaattagc-aaaagataagggg--aaagtgcaatt 23123564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 16928996 - 16928947
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  16928996 ggggtgcaaaatcgcacaattagc-aaaagatagggggggaaagtgcaatt 16928947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 16929242 - 16929291
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  16929242 ggggtgcaaaatcgcacaattagc-aaaagataggggagaaaagtgcaatt 16929291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 24473421 - 24473371
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||| |||||||  ||||||||||||||| ||||||| |||||    
T  24473421 gcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaa 24473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 37397121 - 37397171
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||| ||||||||||||||  |||||| |||||||||||||||| |||||    
T  37397121 gcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaa 37397171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 37752416 - 37752465
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  37752416 ggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 37752465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 43246176 - 43246225
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  43246176 ggggtgcaaaatcacacaattagc-aaaagataggggggaaaagtgcaatt 43246225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 15156182 - 15156210
Alignment:
Q  200 gagggggtgcaaaatcgcacaattgacaa 228  Q
    |||||||||||||||||||||||||||||    
T  15156182 gagggggtgcaaaatcgcacaattgacaa 15156210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 7e-42; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44599623 - 44599494
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44599623 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 44599524  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  44599523 tggc-aaaagataggggtgaaaagtgcaatt 44599494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13863447 - 13863340
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13863447 tcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 13863348  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  13863347 tggcaaaa 13863340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 13863878 - 13864005
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  13863878 tcatcactaaaacacatcggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgc-aaatcgcacaatt 13863976  T
Q  100 agcaaaaagataaggggcaaaagtgcaatt 129  Q
     || |||||||| |||  ||||||||||||    
T  13863977 ggc-aaaagataggggtgaaaagtgcaatt 13864005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 44600073 - 44600184
Alignment:
Q  18 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataagggg 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||     
T  44600073 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggc-aaaagataggggt 44600171  T
Q  117 caaaagtgcaatt 129  Q
     ||||||||||||    
T  44600172 gaaaagtgcaatt 44600184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8643687 - 8643786
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  8643687 tcatcgctaaaacacataggggccttcaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaataacatggggtgcaaaatcgcacaatt 8643786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 9412202 - 9412256
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9412202 gggtgcaaaatcgcacagttagcaaaaagataaggggcaaaagtgcaattgaaca 9412256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 13772793 - 13772846
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13772793 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaattgaaca 13772846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 46816232 - 46816360
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||| ||||| | |||||||||| |||| |||||| ||| |||| |||||| | |||||||||||||||||||| |||||||||||||||||| ||||    
T  46816232 tcatcattaaaatatatgggggccttcaaaccagaaaggggaaaaatgatggggtacaaaatcgctcgtttaaaaatatggggtgcaaaatcgcataatt 46816331  T
Q  100 agcaaaaagataaggggcaaaagtgcaatt 129  Q
     |  ||||||||  ||| ||||||||||||    
T  46816332 -ggtaaaagatagcgggaaaaagtgcaatt 46816360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 3687534 - 3687588
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  3687534 gggtgtaaaatcgcacaattagcaaaaaaataagggacaaaagtgcaattgaaca 3687588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 6908391 - 6908445
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  6908391 gggtgcaaaatcgcacaattagcaaaaagatagggggtaaaagcgcaattgaaca 6908445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 10533140 - 10533062
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  10533140 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 10533062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 37888939 - 37888861
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  37888939 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 37888861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18864073 - 18864001
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  18864073 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 18864001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 20419272 - 20419344
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  20419272 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 20419344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 22740262 - 22740190
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  22740262 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 22740190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 9035269 - 9035319
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  9035269 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 9035319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 18925229 - 18925279
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  18925229 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatt 18925279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 20418966 - 20418916
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  20418966 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 20418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 37889235 - 37889285
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  37889235 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 37889285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 37972038 - 37971988
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  37972038 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 37971988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 37972372 - 37972422
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  37972372 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 37972422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 33628554 - 33628501
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||| |||||||||||||||||||| || ||||| |||||||||||||    
T  33628554 ggtgcaaaattgcacaattagcaaaaagatagggtgcaaatgtgcaattgaaca 33628501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 3205041 - 3205113
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | |||||||||||||||||||||    
T  3205041 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaatt 3205113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 13741635 - 13741591
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  13741635 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 13741591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 13744209 - 13744253
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  13744209 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 13744253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 15567120 - 15567220
Alignment:
Q  35 aaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaac 133  Q
    |||||||| |||||||||| || ||||||||||    ||||| |  || ||||||||| ||||||||||||||||| | |||||||| ||||||||||||    
T  15567120 aaaaggggcaaaagatgggatgaaaaatcgctcaaaaaaaaagagaggatgcaaaatcacacaattagcaaaaagagagggggcaaacgtgcaattgaac 15567219  T
Q  134 a 134  Q
    |    
T  15567220 a 15567220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 17157073 - 17157001
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||    
T  17157073 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaatt 17157001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 22740567 - 22740611
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  22740567 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 22740611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 3687604 - 3687705
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||    
T  3687604 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgc 3687701  T
Q  126 aatt 129  Q
    ||||    
T  3687702 aatt 3687705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 9412288 - 9412374
Alignment:
Q  43 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  9412288 aaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgcaatt 9412374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 46815301 - 46815202
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatgg-gtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||| ||||| || | ||||||||||| |||||||| ||||| |||||| |||| | ||||||||| ||| | ||||| || ||||||||    
T  46815301 tcatcactaaaacatatgggagcattcaaatcagaaagggggaaaatgatggagtgcaagatcgtttgtttaaaaatatgagatgcaagattgcacaatt 46815202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 3204745 - 3204695
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  3204745 gcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 3204695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 5349641 - 5349691
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaa 132  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||||||||||    
T  5349641 gtgcaaaattgcacaatatgcaaaaagatagggggcaaaagtgcaattgaa 5349691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 9412077 - 9412028
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  9412077 ggggtgcaaaatcgcacaattaac-aaaagataagggggaaaagtgcaatt 9412028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 18864350 - 18864428
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  ||| ||||||||||||||||||| |||||    
T  18864350 aaatcagaaagggggaaaactatagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaa 18864428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 27096216 - 27096170
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||    
T  27096216 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaatt 27096170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 27182087 - 27182133
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||    
T  27182087 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaatt 27182133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 29293028 - 29292950
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||||| ||||||||||||||||| |||||    
T  29293028 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaa 29292950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 29293294 - 29293372
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  |||| |||||||||||||||||| |||||    
T  29293294 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaa 29293372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 36527746 - 36527824
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||| |||| |||||    
T  36527746 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaa 36527824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 48359395 - 48359353
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  48359395 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 48359353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 38191435 - 38191388
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagat-aggggaaaaagtgcaatt 38191388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 48359606 - 48359678
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||| |||||||||||||||||||    
T  48359606 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaatt 48359678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 5735429 - 5735382
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaa 127  Q
    |||||||||||||||||||| ||||||||||| || | ||||||||||    
T  5735429 gggtgcaaaatcgcacaattggcaaaaagatagggagaaaaagtgcaa 5735382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9034974 - 9034895
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacat-ggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  || |||||||| |||||||||||| |||||    
T  9034974 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaa 9034895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 34235855 - 34235910
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||| |||||| |||||| | ||||||||| ||||||||||||||||| ||||    
T  34235855 ggggtgcgaaatcgaacaatttgaaaaaagatagggggcaaaagtgcaattaaaca 34235910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 35080132 - 35080183
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||  ||||||| ||||||||||  ||||||||||    
T  35080132 tgcaaaatcgcacaattagcttaaagatagggggcaaaagcacaattgaaca 35080183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 42418976 - 42419055
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacat-ggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  || ||||||||||| ||||||||| |||||    
T  42418976 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaa 42419055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 13772901 - 13772950
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagc-aaatgataggggggaaaagtgcaatt 13772950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 18925315 - 18925349
Alignment:
Q  72 aaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||| ||||||||||||||||||||||||||||||    
T  18925315 aaaaaatggggtgcaaaatcgcacaattagcaaaa 18925349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 42418669 - 42418619
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  || || | |||||||||||||||||||||    
T  42418669 gcaaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaa 42418619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 13772702 - 13772646
Alignment:
Q  72 aaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||| ||||||||||||||| |||||||||| |||||||| || | ||||||||||||    
T  13772702 aaaagatggggtgcaaaatcacacaattagc-aaaagatagggaggaaaagtgcaatt 13772646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 15567046 - 15567017
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaag 108  Q
    ||||||||||||||||||||||||||||||    
T  15567046 ggggtgcaaaatcgcacaattagcaaaaag 15567017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 33628653 - 33628709
Alignment:
Q  72 aaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||| |||||||||||||||||||||||||  ||||||||  ||| ||||||||||||    
T  33628653 aaaagatggggtgcaaaatcgcacaattag-taaaagatagagggaaaaagtgcaatt 33628709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 35080215 - 35080259
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataagggg 116  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||    
T  35080215 aaaaagatggggtgcaaaatcgcacaattaac-aaaagataagggg 35080259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 5349724 - 5349760
Alignment:
Q  70 taaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||||| |||||||||||||||||||||||| |||||    
T  5349724 taaaaagatggggtgcaaaatcgcacaattaacaaaa 5349760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 23686723 - 23686766
Alignment:
Q  85 caaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||    
T  23686723 caaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 23686766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 38826861 - 38826933
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| |||||| || ||||||||||  ||| |||||||||||||||||||    
T  38826861 aaatcagaaagggggaaaactatagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaatt 38826933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 33829556 - 33829685
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33829556 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 33829655  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  33829656 tggc-aaaagataggggtgaaaagtgcaatt 33829685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 33829106 - 33828995
Alignment:
Q  18 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataagggg 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||     
T  33829106 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggc-aaaagataggggt 33829008  T
Q  117 caaaagtgcaatt 129  Q
     ||||||||||||    
T  33829007 gaaaagtgcaatt 33828995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 3403867 - 3403920
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3403867 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 3403920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 30388242 - 30388295
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30388242 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 30388295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 2762661 - 2762606
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2762661 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaaca 2762606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 10039843 - 10039898
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10039843 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaaca 10039898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 18242033 - 18242087
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18242033 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaaca 18242087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 33972190 - 33972244
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33972190 gggtgcaaaatctcacaattagcaaaaagatatggggcaaaagtgcaattgaaca 33972244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 3403936 - 3404038
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  3403936 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgc 3404034  T
Q  126 aatt 129  Q
    ||||    
T  3404035 aatt 3404038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 11656658 - 11656603
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  11656658 ggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaattgaaca 11656603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 10087806 - 10087884
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  10087806 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 10087884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 33974247 - 33974325
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  33974247 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 33974325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 13579528 - 13579583
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  13579528 ggggtgcagaattgcacaattagcaaaaatatagggggcaaaagtgcaattgaaca 13579583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 33658617 - 33658563
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||| ||||    
T  33658617 gggtgcaaaattgcacaattggcaaaaagataaagggcaaaagtgcaattaaaca 33658563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 3403778 - 3403722
Alignment:
Q  72 aaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  3403778 aaaagatggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 3403722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 30388311 - 30388411
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||| |||||||| |||| |||||| |    
T  30388311 aaatcagaaagggggtaaaaagatggggtgcaaaatcgctcaa--aaaaaaagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtac 30388407  T
Q  126 aatt 129  Q
    ||||    
T  30388408 aatt 30388411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 32733972 - 32734022
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  32733972 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 32734022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 7654496 - 7654568
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||| || |||||||||||  |||||||||||||||||||||||    
T  7654496 aaatcagaaagggggaaaactatagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaatt 7654568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 18242103 - 18242183
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| ||||||    
T  18242103 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaa 18242183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 21032069 - 21032005
Alignment:
Q  43 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||||||||||    
T  21032069 aaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaa 21032005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 21032155 - 21032107
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaa 127  Q
    |||||||||||||||||||||  ||| |||||| |||||||||||||||    
T  21032155 ggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaa 21032107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 29074350 - 29074398
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  29074350 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaa 29074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 29079114 - 29079162
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  29079114 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaa 29079162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 29106923 - 29106971
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  29106923 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaa 29106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 31598157 - 31598200
Alignment:
Q  86 aaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||  |||||||||| |||||||||||||||||    
T  31598157 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatt 31598200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 31598641 - 31598684
Alignment:
Q  86 aaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||  |||||||||| |||||||||||||||||    
T  31598641 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatt 31598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 10039729 - 10039681
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagc-aaaagat-agggggaaaagtgcaatt 10039681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 12714481 - 12714436
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaa-gatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 18241908 - 18241859
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  18241908 ggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 18241859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 2762574 - 2762509
Alignment:
Q  43 aaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaa 107  Q
    ||||||||| ||||||||||| |||    ||||| | |||||||||||||||||||||||||||||    
T  2762574 aaaaagatgaggtgcaaaatcactcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaa 2762509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 2354786 - 2354830
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||| |||||||| |||  |||||||||||||||||||||||    
T  2354786 gcaaaatggctcgttttaaacaatggggtgcaaaatcgcacaatt 2354830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 21032158 - 21032130
Alignment:
Q  200 gagggggtgcaaaatcgcacaattgacaa 228  Q
    |||||||||||||||||||||||||||||    
T  21032158 gagggggtgcaaaatcgcacaattgacaa 21032130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 22755065 - 22755109
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  ||| |||||||||||||| ||||    
T  22755065 gcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataatt 22755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7591334 - 7591228
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7591334 tcatcgctaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 7591235  T
Q  100 agcaaaa 106  Q
     ||||||    
T  7591234 ggcaaaa 7591228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26842158 - 26842265
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26842158 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 26842257  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  26842258 tggcaaaa 26842265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 2639402 - 2639531
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2639402 tcatcgctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 2639501  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  2639502 tggc-aaaagataggggtgaaaagtgcaatt 2639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26841721 - 26841592
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||  |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26841721 tcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 26841622  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  26841621 tggc-aaaagataggggtgaaaagtgcaatt 26841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 18296192 - 18296103
Alignment:
Q  18 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18296192 gggggcctccaaatcagaaaaggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaa 18296103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 2638936 - 2638847
Alignment:
Q  18 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  2638936 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaa 2638847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7591770 - 7591870
Alignment:
Q  1 tcatcactaaaacacat-gggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||| || | |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7591770 tcatcactaaaatacgtagggggcctccaaatcagaaagggggaaaaaaatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 7591869  T
Q  99 t 99  Q
    |    
T  7591870 t 7591870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 32673020 - 32673074
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32673020 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 32673074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 11883799 - 11883746
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11883799 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 11883746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 6171334 - 6171388
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6171334 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaaca 6171388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 20347341 - 20347395
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20347341 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaaca 20347395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 30191100 - 30191046
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30191100 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaaca 30191046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 40221443 - 40221543
Alignment:
Q  36 aaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaa-aacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaac 133  Q
    ||||||| |||||||| |||||||||||||||    ||| || | ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  40221443 aaaggggcaaaagatgaggtgcaaaatcgctcaaaaaaagaagaaggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaattgaac 40221542  T
Q  134 a 134  Q
    |    
T  40221543 a 40221543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18296642 - 18296707
Alignment:
Q  1 tcatcactaaaacacatgggg-gcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 64  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  18296642 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 18296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 38490780 - 38490861
Alignment:
Q  19 ggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||  |||||| ||| ||||||||||||||| ||||||||||||||||||||| |||| | |||||||||||||||||    
T  38490780 ggggccttgaaatcataaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaatt 38490861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 40469607 - 40469660
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaattgaaca 40469660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 24832422 - 24832336
Alignment:
Q  43 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||| |||||||||||||    ||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  24832422 aaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 24832336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 40469676 - 40469778
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  40469676 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgc 40469774  T
Q  126 aatt 129  Q
    ||||    
T  40469775 aatt 40469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 8851254 - 8851176
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  8851254 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 8851176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 15920912 - 15920966
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  15920912 gggtgtaaaatcgcacaattagcaaaaagttagggggcaaaagtgcaattgaaca 15920966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 26692768 - 26692846
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  26692768 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 26692846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 37720301 - 37720232
Alignment:
Q  36 aaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||  || || ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  37720301 aaaggggaaaactataggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 37720232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 7664354 - 7664282
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  7664354 aaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 7664282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 7664621 - 7664693
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  7664621 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 7664693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 7979982 - 7980029
Alignment:
Q  58 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  7979982 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaa 7980029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 17345909 - 17345854
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  17345909 ggggtgaaaaatcgcacaattaacaaaaatatagggggcaaaagtgcaattgaaca 17345854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 30191030 - 30190928
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||    
T  30191030 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgc 30190932  T
Q  126 aatt 129  Q
    ||||    
T  30190931 aatt 30190928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 11883890 - 11883975
Alignment:
Q  44 aaaagatgg-gtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||| ||||||||||||||    ||||| | |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  11883890 aaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 11883975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 16910905 - 16910855
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  16910905 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 16910855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 16911217 - 16911295
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  16911217 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 16911295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 17851350 - 17851428
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||| |||||||||||||| |||||    
T  17851350 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaa 17851428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 7979643 - 7979599
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  7979643 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 7979599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 8851558 - 8851602
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  8851558 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 8851602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 18750102 - 18750146
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  18750102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 18750146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 26692474 - 26692430
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  26692474 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 26692430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 11883714 - 11883628
Alignment:
Q  43 aaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||| |||||||||| ||||    ||||| | |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  11883714 aaaaagatgaggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 11883628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 19141797 - 19141875
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||||| ||||||||||||||||| |||||    
T  19141797 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaa 19141875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 41790888 - 41790961
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||| |||  |||||| |||||||||||||||| || |||| ||| |||| ||||||||||||    
T  41790888 gcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggc-aaaatataggggggaaaagtgcaatt 41790961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 6324994 - 6324945
Alignment:
Q  56 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  6324994 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 6324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 41790568 - 41790524
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||||| |||  |||||||||||||||||||||||    
T  41790568 gcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaatt 41790524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 6325298 - 6325373
Alignment:
Q  31 tcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||| ||||||||  || ||| |||||||||||||||||| |  ||| ||||||||||||||||||| |||||    
T  6325298 tcagaaatggggaaaactatagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaa 6325373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 18055221 - 18055166
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| ||||||  ||| || |||||||||||||| ||||    
T  18055221 ggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaaca 18055166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 20347427 - 20347513
Alignment:
Q  43 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||| ||||||||| |||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  20347427 aaaaagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgcaatt 20347513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 32673090 - 32673191
Alignment:
Q  28 aaatcagaaa-aggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| ||||  |||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || ||||||| ||||| ||||||||    
T  32673090 aaatcagaaagagggcgaaaagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggc-aaaagat-aggggaaaaagtgc 32673187  T
Q  126 aatt 129  Q
    ||||    
T  32673188 aatt 32673191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 40469509 - 40469454
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    ||||||||||||||||    ||||| | ||||||||||||||||||||||||||||    
T  40469509 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaa 40469454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 43495484 - 43495538
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||  ||||||||| ||||| |||||||||||| ||||    
T  43495484 ggggtgcaaaatcgcacaattgacaaaaagat-agggggaaaagtgcaattaaaca 43495538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 5793525 - 5793475
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  || || ||||||||||||||||| |||||    
T  5793525 gcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaa 5793475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 17851055 - 17851006
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||| |||||    
T  17851055 gcaaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattggcaaa 17851006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 18296685 - 18296742
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||| ||||||||||||||||||||||| || |||||||| |||  ||||||||||||    
T  18296685 aaaaagatggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 18296742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 30191197 - 30191274
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | ||||||||||||||||||||||   |||||||| |||| ||||||||||||    
T  30191197 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatta-ataaaagataggggggaaaagtgcaatt 30191274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 32672924 - 32672847
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| |  ||||||||||||||||||||| | |||||||||||  |||||||||||||    
T  32672924 gggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgcacaattaac-aaaagataaggaacaaaagtgcaatt 32672847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 5379906 - 5379979
Alignment:
Q  27 caaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||| |||| |||| || ||| |||||||||| ||||| |||  | |||||||||||||||||||||    
T  5379906 caaatcagaaagggggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaatt 5379979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 43495481 - 43495509
Alignment:
Q  200 gagggggtgcaaaatcgcacaattgacaa 228  Q
    |||||||||||||||||||||||||||||    
T  43495481 gagggggtgcaaaatcgcacaattgacaa 43495509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6715 - 6822
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6715 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 6814  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  6815 tggcaaaa 6822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6285 - 6179
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  6285 tcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcatttaaaaatatggggtgtaaaatcgcacaatt 6186  T
Q  100 agcaaaa 106  Q
    |||||||    
T  6185 agcaaaa 6179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36096395 - 36096524
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36096395 tcatcactaaaacacatggggggcctccaaatcagaaaggggaaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 36096494  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  36096495 tggc-aaaagataggggtgaaaagtgcaatt 36096524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 50679344 - 50679473
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  50679344 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaat 50679443  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  50679444 tggc-aaaagataggggtgaaaagtgcaatt 50679473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43050741 - 43050641
Alignment:
Q  1 tcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  43050741 tcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcactcgtttaaaaacatggggtgcaaaatcgcacaat 43050642  T
Q  99 t 99  Q
    |    
T  43050641 t 43050641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 50678895 - 50678784
Alignment:
Q  18 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataagggg 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||     
T  50678895 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggc-aaaagataggggt 50678797  T
Q  117 caaaagtgcaatt 129  Q
     ||||||||||||    
T  50678796 gaaaagtgcaatt 50678784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36095950 - 36095844
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36095950 tcatcactaaaatacatggggggcctccaaatcagaaa-ggggaaaaagatagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 36095852  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  36095851 tggcaaaa 36095844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43051172 - 43051279
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  43051172 tcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaat 43051271  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  43051272 tggcaaaa 43051279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45830118 - 45830216
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  45830118 tcatcactaaaacatatggggggctccaaatcagaaa-ggggaaaaagatggggtgcaaaatcgctcttttaaaaacatggggtgtaaaatcgcacaatt 45830216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 56505827 - 56505698
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||| |||| |||||| ||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||||    
T  56505827 tcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaat 56505728  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||| ||||||||||||    
T  56505727 tggc-aaaagataggggggaaaagtgcaatt 56505698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47219125 - 47219228
Alignment:
Q  1 tcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||||||||| ||||||||||||||||    |||||||||||||| || ||||||||| ||||||||||||  ||||||||||||||||||    
T  47219125 tcatcactaaaacacatggagggcctccaaatcaga----gggaaaaagatggggtgtaaaatcgctggtttaaaaacataaggtgcaaaatcgcacaat 47219220  T
Q  99 tagcaaaa 106  Q
    ||||||||    
T  47219221 tagcaaaa 47219228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 56506494 - 56506623
Alignment:
Q  1 tcatcactaaaacacatg-ggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||| | ||||||| ||||||||||| |||||||| |||||| |||||||||||||  |||||||||||| || |||||| |||||||    
T  56506494 tcatcactaaaacacacgaggggccttcaaatcagaaagggggaaaatgatggggtgcaaaatcgctcaattaaaaacatggagtacaaaattgcacaat 56506593  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || ||||||||||||  ||||||||||||    
T  56506594 tggc-aaaagataagggtgaaaagtgcaatt 56506623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 16555764 - 16555866
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  16555764 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagc-aaaagataagggggaaaagtgc 16555862  T
Q  126 aatt 129  Q
    ||||    
T  16555863 aatt 16555866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 11241567 - 11241621
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11241567 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgaaattgaaca 11241621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 16555695 - 16555748
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaattgaaca 16555748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 22681754 - 22681702
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22681754 gtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaaca 22681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 49178694 - 49178639
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  49178694 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaattgaaca 49178639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 3930357 - 3930407
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattg 130  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3930357 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattg 3930407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 4239314 - 4239392
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||| || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  4239314 aaatcagaaagggggaaaaatatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 4239392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 13198781 - 13198727
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  13198781 gggtgcaaaatcgcacaattagaaaaaagataagggacaaaagtgcaattgaaca 13198727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 27304893 - 27304947
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaac 133  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  27304893 ggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaattgaac 27304947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 32703598 - 32703676
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  32703598 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 32703676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 35393651 - 35393599
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  35393651 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagttcaattgaaca 35393599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 5206107 - 5206190
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||    ||||| | || |||||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  5206107 gggtgcaaaatcgctcagaaaaaaagagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaattgaaca 5206190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45829127 - 45829028
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||| || | ||| | ||||||||||   |||||||||||||| |||||||||||| |||||| ||||| |||| |||||||||||||||    
T  45829127 tcatcactaaaacatatagaggcattcaaatcagaacgagggaaaaagatgggatgcaaaatcgcttgtttaataacattgggtacaaaatcgcacaatt 45829028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 8488361 - 8488307
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  8488361 gggtgcaaaattgcacaattagcaaaaacatagggggcaaaagtgcaattgaaca 8488307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 28196452 - 28196374
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  28196452 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 28196374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 28196721 - 28196799
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  28196721 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 28196799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 25161983 - 25161906
Alignment:
Q  29 aatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  25161983 aatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 25161906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 39744400 - 39744485
Alignment:
Q  15 catgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||| || | |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  39744400 catggggaccacaaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 39744485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 11529262 - 11529195
Alignment:
Q  40 gggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    ||||||| |||| ||||||||||||| || ||||||||||||||||||||||| ||||||| ||||||    
T  11529262 gggaaaatgatgtggtgcaaaatcgcacgattaaaaacatggggtgcaaaatcacacaattggcaaaa 11529195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 169092 - 169042
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  169092 gcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaa 169042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 8182046 - 8181996
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaatt 8181996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9380413 - 9380335
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||| |||||||||||||||| |||||    
T  9380413 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaa 9380335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 9380689 - 9380767
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||| |||||||||||||||||| |||||    
T  9380689 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaa 9380767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 16555605 - 16555520
Alignment:
Q  44 aaaagatgggtgcaaaatcgctcgtttaaaaac-atggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||    |||||  | |||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  16555605 aaaagatgggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaac-aaaagataagggggaaaagtgcaatt 16555520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 23432559 - 23432481
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||| | || |||||||| |||||||||| ||| ||||||||  |||||| ||| |||||||||||||||||    
T  23432559 gggtgcaaaattgttcatttaaaaagatggggtgcagaattgcacaattgacaaaaaaatagggggcaaaagtgcaatt 23432481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 293152 - 293237
Alignment:
Q  15 catgggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||   |||||||||| ||||||||  ||  || ||||||||||||||||||||  |||||||||||||||||||||||    
T  293152 catgggggccataaaatcagaaagggggaaaactatacggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 293237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 169415 - 169459
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  169415 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 169459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 9023628 - 9023700
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||    
T  9023628 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaatt 9023700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 39744136 - 39744064
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||| ||||||||||||||    
T  39744136 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaatt 39744064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 43292115 - 43292071
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  43292115 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 43292071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 3930427 - 3930528
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| ||||||||||||     ||||| | |||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  3930427 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagat-agggggaaaagtgc 3930524  T
Q  126 aatt 129  Q
    ||||    
T  3930525 aatt 3930528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 5206222 - 5206278
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||| || |||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  5206222 aaaaagatagggtgcaaaatcgcacaatta--aaaaagataagggggaaaagtgcaatt 5206278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 8182172 - 8182222
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||||||||||||| ||| |||  ||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaatt 8182222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 9023322 - 9023272
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||| |||||||||||  ||||||||||||||||||||||| |||||    
T  9023322 gcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 9023272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 23539945 - 23539867
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| | ||||||| || ||| ||||||||| |||||| |||  ||||||||||||||||||||||| |||||    
T  23539945 aaatcagaaaggaggaaaaatatagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaa 23539867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 26207438 - 26207388
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  26207438 gcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaa 26207388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 26207722 - 26207772
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  26207722 gcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaa 26207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 32703331 - 32703253
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | |||||||| |||||||||||| |||||    
T  32703331 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaa 32703253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 39086571 - 39086649
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||  ||||||||||||||||||| |||||    
T  39086571 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaa 39086649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 43292333 - 43292383
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  43292333 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaa 43292383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 44468899 - 44468949
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  44468899 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 44468949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 48406361 - 48406411
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  || |||||||||||||||||||| |||||    
T  48406361 gcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaa 48406411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 18077167 - 18077251
Alignment:
Q  45 aaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||| |||||||||||||    ||||| | ||||||||||||||||||||||||||||| ||| |||  ||||||||||||    
T  18077167 aaagatgggatgcaaaatcgctcaacaaaaaagagggggtgcaaaatcgcacaattagcaaaaa-ataggggtgaaaagtgcaatt 18077251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 23540200 - 23540272
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| | ||||||||||||||||||  || ||||||||||||||||||||    
T  23540200 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaatt 23540272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 25162261 - 25162333
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||| |||||||||| |||||||    
T  25162261 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaatt 25162333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 39415306 - 39415251
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    ||||||||||||||||   |||||| |  |||||||||||||||||||||||||||    
T  39415306 gggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgcacaattagcaaaa 39415251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 48406064 - 48405989
Alignment:
Q  31 tcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||| ||| |||| |||||    
T  48406064 tcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaa 48405989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 8488482 - 8488530
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  8488482 ggggtgcaaaatcgcacaattag-aaaaagataaggcg-aaaagtgcaatt 8488530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 13198906 - 13198955
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  13198906 ggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 13198955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 23433433 - 23433534
Alignment:
Q  27 caaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgca 126  Q
    ||||||||||| ||| |||||   ||||||||||||||||  ||||||| |  || |||| |||||||||||| |  |||||||||| |||| |||||||    
T  23433433 caaatcagaaaggggcaaaaaagagggtgcaaaatcgctcacttaaaaagaaaggatgcacaatcgcacaatt-gacaaaagataagaggcagaagtgca 23433531  T
Q  127 att 129  Q
    |||    
T  23433532 att 23433534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 24775695 - 24775641
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||| |||||||||||||||  |||||| ||| ||||||||||||||||| ||||    
T  24775695 gggtacaaaatcgcacaattgacaaaaatatagggggcaaaagtgcaattaaaca 24775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 7603296 - 7603348
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||| || | ||||||||| || |||||||||||||| ||||    
T  7603296 gtgcaaaatcgcacatttggtaaaaagatagggagcaaaagtgcaattaaaca 7603348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 22681631 - 22681603
Alignment:
Q  200 gagggggtgcaaaatcgcacaattgacaa 228  Q
    |||||||||||||||||||||||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaa 22681603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 39912463 - 39912507
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||| |||||||||||  ||||| |||||||||||||||||    
T  39912463 gcaaaatcactcgtttaaaactatgggatgcaaaatcgcacaatt 39912507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 54508997 - 54509050
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||| |||||||||||||||| |||||| |||  ||||||||||||||||| ||||    
T  54508997 ggggagcaaaatcgcacaattggcaaaatgat--ggggcaaaagtgcaattaaaca 54509050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 6002813 - 6002943
Alignment:
Q  1 tcatcactaaaacacatggggg--cctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaa 97  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6002813 tcatcactaaaacacatgggggggcctccaaatcagaaagggggaaaaagatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaa 6002912  T
Q  98 ttagcaaaaagataaggggcaaaagtgcaatt 129  Q
    || || |||||||| ||   ||||||||||||    
T  6002913 tt-gcgaaaagatagggatgaaaagtgcaatt 6002943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 49284975 - 49285082
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  49284975 tcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaat 49285074  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  49285075 tggcaaaa 49285082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 49284525 - 49284414
Alignment:
Q  18 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataagggg 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||     
T  49284525 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggc-aaaagataggggt 49284427  T
Q  117 caaaagtgcaatt 129  Q
     ||||||||||||    
T  49284426 gaaaagtgcaatt 49284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 6002371 - 6002242
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||||||||||  |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  6002371 tcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaat 6002272  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | |  |||||||| |||  ||||||||||||    
T  6002271 t-gacaaaagataggggtgaaaagtgcaatt 6002242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 17518481 - 17518535
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518481 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 17518535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 39691948 - 39692049
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgca 126  Q
    |||||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| |  |||| ||| |||| |||||||||    
T  39691948 aaatcagaaagggggaaaaagatagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaatt-gacaaaatataggggggaaaagtgca 39692046  T
Q  127 att 129  Q
    |||    
T  39692047 att 39692049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 47955483 - 47955429
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47955483 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaaca 47955429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 22149580 - 22149633
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22149580 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaaca 22149633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 8108899 - 8108953
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8108899 gggtgtaaaatcgcacaattagcaaaaagatatggggcaaaagtgcaattgaaca 8108953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 41083085 - 41083031
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  41083085 gggtgcaaaatcgcacaattagtaaaaagataaggggcaaaagtacaattgaaca 41083031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 48105064 - 48105165
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgca 126  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| || |||  |||||||| |||||||||    
T  48105064 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggc-aaactataagggggaaaagtgca 48105162  T
Q  127 att 129  Q
    |||    
T  48105163 att 48105165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9347232 - 9347154
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  9347232 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 9347154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 13918552 - 13918474
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  13918552 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 13918474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 27172221 - 27172143
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  27172221 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 27172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 28633826 - 28633725
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgca 126  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||| |||||| || |||  |||||||| |||||||||    
T  28633826 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggc-aaactataagggggaaaagtgca 28633728  T
Q  127 att 129  Q
    |||    
T  28633727 att 28633725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 48104784 - 48104683
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgca 126  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| || |||  ||| |||| |||||||||    
T  48104784 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt-gccaaactataggggggaaaagtgca 48104686  T
Q  127 att 129  Q
    |||    
T  48104685 att 48104683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 50526420 - 50526498
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  50526420 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 50526498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 27172490 - 27172567
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || || ||||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  27172490 aaatcagaaagggggaaaactataggggcaaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaa 27172567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 6703566 - 6703494
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  6703566 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaatt 6703494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 20480273 - 20480201
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  20480273 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 20480201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 26814800 - 26814728
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  26814800 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 26814728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 26815067 - 26815139
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  26815067 aaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 26815139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 44911131 - 44911052
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||||||||||||||||||||||| ||||||    
T  44911131 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaa 44911052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 47955413 - 47955311
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||    
T  47955413 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgc 47955315  T
Q  126 aatt 129  Q
    ||||    
T  47955314 aatt 47955311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 9347499 - 9347577
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||| |||||||| |||||    
T  9347499 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaa 9347577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 32163019 - 32163069
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  32163019 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 32163069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 42611263 - 42611190
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| || |||  |||||||| ||||||||||||    
T  42611263 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggc-aaactataagggggaaaagtgcaatt 42611190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 46823949 - 46823871
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||| |||||||||||||||||| |||||    
T  46823949 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaa 46823871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 50429734 - 50429684
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  50429734 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaa 50429684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 50430057 - 50430107
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  50430057 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 50430107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 999473 - 999550
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaa 104  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| ||||||||||||||||| ||||    
T  999473 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaa 999550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48191305 - 48191369
Alignment:
Q  1 tcatcactaaaacacatgggg-gcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 64  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||    
T  48191305 tcatcactaaaacacatggggggcctccaaatcag-aaagggggaaaagatggggtgcaaaatcgc 48191369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 28634105 - 28634177
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||| ||||||||||  |||||||||||||||||||||||    
T  28634105 aaatcagaaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaatt 28634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 50615569 - 50615641
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||    
T  50615569 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaatt 50615641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 50623397 - 50623469
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||    
T  50623397 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaatt 50623469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 22149649 - 22149748
Alignment:
Q  28 aaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgca 126  Q
    |||||||||| ||| ||||||||||| ||||||||||||     ||||| | | |||||||||||||||||||||| |||||||| |||| |||||||||    
T  22149649 aaatcagaaaggggcaaaaagatggggtgcaaaatcgctaaa--aaaaaaaggaggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgca 22149745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 31848067 - 31848016
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||| ||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaaaca 31848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 6703870 - 6703920
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  |||||||||||||| |||||||| |||||    
T  6703870 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaa 6703920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 8108985 - 8109042
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||| ||||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  8108985 aaaaagatggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgcaatt 8109042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 46824254 - 46824304
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  |||||||||||||| |||||||| |||||    
T  46824254 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaa 46824304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 49318114 - 49318192
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||||| ||||||||||||||||| |||||    
T  49318114 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaa 49318192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48190876 - 48190811
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 64  Q
    ||||||||||||  |||||||| ||||||||| ||||| |||||||||||| ||||||||||||||    
T  48190876 tcatcactaaaattcatggggggcctccaaattagaaagggggaaaaagatggggtgcaaaatcgc 48190811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 999189 - 999145
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  999189 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaatt 999145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 4692411 - 4692459
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||  |||||||||||||| |||||||| |||||    
T  4692411 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaa 4692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 20371116 - 20371072
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||    
T  20371116 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaatt 20371072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 24671338 - 24671282
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaa 107  Q
    ||||||||||||||||  ||||||  |||| |||||||||||||||||| |||||||    
T  24671338 gggtgcaaaatcgctcaattaaaaggatggagtgcaaaatcgcacaattggcaaaaa 24671282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 31848002 - 31847900
Alignment:
Q  27 caaatcagaaaagggg-aaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtg 124  Q
    |||| |||||| |||| |||||||| ||||||||||||||||    ||||| ||||| |||||||| ||||||||||| |||||||||||||  ||||||    
T  31848002 caaaccagaaagggggcaaaaagatcgggtgcaaaatcgctcaaa-aaaaatatgggatgcaaaattgcacaattagc-aaaagataagggggtaaagtg 31847905  T
Q  125 caatt 129  Q
    |||||    
T  31847904 caatt 31847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 46057068 - 46057016
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||    
T  46057068 gtgcaaaatcgcacaattggcaaaaaaatagggggcaaaattgcaattaaaca 46057016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 19008697 - 19008799
Alignment:
Q  27 caaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    ||||||||||| ||||||||  || ||| ||||||| || ||||| |||  ||||||||||||||||||||||| || |||  ||| |||| ||||||||    
T  19008697 caaatcagaaagggggaaaattatagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaatt-gcgaaactataggggggaaaagtgc 19008795  T
Q  126 aatt 129  Q
    ||||    
T  19008796 aatt 19008799  T

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Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 20480591 - 20480638
Alignment:
Q  58 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||||  || |||||||||||||||||||| |||||    
T  20480591 aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaa 20480638  T

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Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 13589659 - 13589707
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagc-aaaagat-agggggaaaagtgcaatt 13589707  T

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Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 13918843 - 13918893
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||| ||||||||||  ||| ||||||||||||||||||| |||||    
T  13918843 gcaaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 13918893  T

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Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 17518384 - 17518308
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||| | ||||||||||||| ||| ||||||||    
T  17518384 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaac-aaaagataagggg-aaaggtgcaatt 17518308  T

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Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 44911413 - 44911463
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||| |||  || |||||||||||||||||||| |||||    
T  44911413 gcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaa 44911463  T

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Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 47955580 - 47955657
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | ||||||||||||||||||||||   |||||||| |||| ||||||||||||    
T  47955580 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatta-ataaaagataggggggaaaagtgcaatt 47955657  T

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Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 48190833 - 48190776
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||| ||||||||||||||||||||||| || |||||||| |||  ||||||||||||    
T  48190833 aaaaagatggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 48190776  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 49317857 - 49317779
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| | ||||||||||||||||||  ||||| |||||||| |||||||| |||||    
T  49317857 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaa 49317779  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 49318421 - 49318463
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||  ||||| |||||||||||||||||    
T  49318421 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaatt 49318463  T

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Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 33085775 - 33085713
Alignment:
Q  28 aaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatc 91  Q
    |||||||||| | |||||| |||| |||||||||||| |||||||||  ||||||||||||||||    
T  33085775 aaatcagaaaggaggaaaaggatgaggtgcaaaatcgttcgtttaaa--catggggtgcaaaatc 33085713  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 21687103 - 21687059
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  ||||||||||||||  |||||||    
T  21687103 gcaaaatcgctcgtttaaaactatggggtgcaaaattacacaatt 21687059  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 21687445 - 21687493
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||  ||| ||| ||||||||||||||| |||||    
T  21687445 aaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaa 21687493  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 42611590 - 42611634
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||| ||||||||  ||| |||||||||||||||||||    
T  42611590 gcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaatt 42611634  T

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Target: chr5 (Bit Score: 79; Significance: 4e-37; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18817531 - 18817660
Alignment:
Q  1 tcatcactaaaacacatgggggc-ctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    ||||| ||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18817531 tcatcgctaaaacacatggggggtctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 18817630  T
Q  99 tagcaaaaagataaggggcaaaagtgcaatt 129  Q
    | || |||||||| |||  ||||||||||||    
T  18817631 tggc-aaaagataggggtgaaaagtgcaatt 18817660  T

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Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18817086 - 18816979
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||| || |||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18817086 tcatcactaaaatacgtggggggcctccaaatcagaaagggggaaaaagatgggatgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 18816987  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  18816986 tggcaaaa 18816979  T

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Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11350941 - 11350835
Alignment:
Q  1 tcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||    
T  11350941 tcatcactaaaacacatggggggcctccaaatcaaaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaat-gcacaat 11350843  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  11350842 tggcaaaa 11350835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11351349 - 11351454
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  11351349 tcattactaaaacacatgggggcctccaaatcataaagggggaaaa-gatggggtgtaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaatt 11351447  T
Q  100 agcaaaa 106  Q
     ||||||    
T  11351448 ggcaaaa 11351454  T

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Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 18433191 - 18433138
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18433191 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 18433138  T

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Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 25115934 - 25115880
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25115934 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaaca 25115880  T

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Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 25175026 - 25174972
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25175026 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaaca 25174972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 34577040 - 34576988
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34577040 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaaca 34576988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 18433122 - 18433020
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||    
T  18433122 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgc 18433024  T
Q  126 aatt 129  Q
    ||||    
T  18433023 aatt 18433020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 26020625 - 26020573
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  26020625 gtgcaaaatcgcacaattaacaaaaagataagggacaaaagtgcaattgaaca 26020573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 42919410 - 42919338
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||| |||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  42919410 aaatcagaaaggggaaaaatgatagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaatt 42919338  T

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Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 26020557 - 26020455
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||| |||||||||||||||    ||||| |||||||||||||||||||||||||| |||||||| || | ||||||||    
T  26020557 aaatcagaaagggggcaaaaagatgcggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagc-aaaagatagggaggaaaagtgc 26020459  T
Q  126 aatt 129  Q
    ||||    
T  26020458 aatt 26020455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 12498673 - 12498595
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  12498673 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 12498595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 19514632 - 19514554
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  19514632 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 19514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 22729388 - 22729466
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  22729388 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 22729466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 5187700 - 5187645
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||| |||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  5187700 ggggtacaaaatcgcataattagcaaaaagataggggacaaaagtgcaattgaaca 5187645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 5779742 - 5779793
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  5779742 tgcaaaatcgcacaattagcaaaaagataggagacaaaagtgcaattgaaca 5779793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 2817247 - 2817177
Alignment:
Q  36 aaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||| || ||| ||||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  2817247 aaaggggaaaaatatagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaa 2817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 3888345 - 3888267
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||| |||||| |||||    
T  3888345 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaa 3888267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 3888610 - 3888688
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||| |||||| |||||    
T  3888610 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaa 3888688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 12498876 - 12498954
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||| ||||||||  ||||||||||||||||||||||| |||||    
T  12498876 aaatcagaaagggggaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaa 12498954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 21207304 - 21207254
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  21207304 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 21207254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 26571140 - 26571190
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  26571140 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 26571190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 37610594 - 37610644
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  37610594 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaa 37610644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 37780718 - 37780768
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  37780718 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaa 37780768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 43463833 - 43463783
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  43463833 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 43463783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 31569983 - 31569912
Alignment:
Q  56 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| |  ||||||| ||||| ||||||||||||    
T  31569983 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaatt-gacaaaagat-agggggaaaagtgcaatt 31569912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 26570835 - 26570763
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  |||||||||||||||||||||||    
T  26570835 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 26570763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 34147245 - 34147173
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | |||||||||||||||||||||    
T  34147245 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaatt 34147173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 43464140 - 43464212
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  43464140 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaatt 43464212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 5187805 - 5187879
Alignment:
Q  54 tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||    ||||| | |||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  5187805 tgcaaaatcgctcaaaaaaaaatagggggtgcaaaattgcacaattaacaaaa-gataaggggcaaaagtgcaatt 5187879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 9869738 - 9869793
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| | ||||||| | ||||||||||||||||| ||||    
T  9869738 ggggtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaattaaaca 9869793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 22729112 - 22729041
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || || ||||||||||||||||||||  |||  ||||||||||||||||||    
T  22729112 aaatcagaaagggggaaaactataggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatt 22729041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 25115864 - 25115762
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||| ||||||| || |||||||| |||| ||||||||    
T  25115864 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggc-aaaagataggggggaaaagtgc 25115766  T
Q  126 aatt 129  Q
    ||||    
T  25115765 aatt 25115762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 25174956 - 25174854
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||| ||||||| || |||||||| |||| ||||||||    
T  25174956 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggc-aaaagataggggggaaaagtgc 25174858  T
Q  126 aatt 129  Q
    ||||    
T  25174857 aatt 25174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 10098919 - 10098961
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  10098919 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 10098961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 11316950 - 11317000
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||| |||||||  ||||||||||||||||||||||| |||||    
T  11316950 gcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaa 11317000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 25175123 - 25175200
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  25175123 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 25175200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 37610279 - 37610229
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||| |||||    
T  37610279 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaa 37610229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 37780397 - 37780347
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||| |||||    
T  37780397 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaa 37780347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 12441196 - 12441245
Alignment:
Q  85 caaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||  |||||||||| ||||||||||||||||| ||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaaca 12441245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 19514911 - 19514983
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| |||||||  |||||||||||  |||||||||||||||||||||||    
T  19514911 aaatcagaaagggggaaaactatagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaatt 19514983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 25940599 - 25940555
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  || ||||||||||||||||||||    
T  25940599 gcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaatt 25940555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 34147458 - 34147530
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | | |||||||||||||||||||    
T  34147458 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaatt 34147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 9665700 - 9665649
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||| |||||||||||||||||||||||| |||||||||   ||||||||||    
T  9665700 tgcagaatcgcacaattagcaaaaagatagggggcaaaaacacaattgaaca 9665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaat 128  Q
    ||||||||||||||||||| || |||||||| ||||||||||||||||    
T  16726130 ggtgcaaaatcgcacaattggc-aaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 22428995 - 22428960
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22428995 aaaaagatggggtgcaaaatcgcacaattagcaaaa 22428960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 22429188 - 22429223
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22429188 aaaaagatggggtgcaaaatcgcacaattagcaaaa 22429223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 23011261 - 23011312
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||| || |||||||| ||||||||| ||||||| ||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaaaca 23011312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 18433316 - 18433365
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  18433316 ggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 18433365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 25116061 - 25116110
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  25116061 ggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 25116110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 25940990 - 25941040
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||| |||||||||||| ||||| ||||    
T  25940990 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaa 25941040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 34577156 - 34577212
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||| ||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||    
T  34577156 aaaaagatggggtgcaaaatcacacaattagc-aaaagat-aggggaaaaagtgcaatt 34577212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 23011131 - 23011091
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaa 121  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  23011131 gggtgcaaaatcgcacaattagc-aaaagataaggggaaaaa 23011091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 5187613 - 5187577
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaa 107  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  5187613 aaaaagatggggtgcaaaatcgcacgattagcaaaaa 5187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 10098597 - 10098553
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  || || |||||||||||||||||    
T  10098597 gcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaatt 10098553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 41072190 - 41072234
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  || ||||||||||||| ||||||    
T  41072190 gcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaatt 41072234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 41383167 - 41383195
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaa 107  Q
    |||||||||||||||||||||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaa 41383195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1928354 - 1928461
Alignment:
Q  1 tcatcactaaaacacatgggggcc-tccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaat 98  Q
    |||||||||||||| ||||||||| | |||| ||||||||||||||| ||| |||||||||| | |||||||||||| ||||||||||||||||||||||    
T  1928354 tcatcactaaaacatatgggggcccttcaaaccagaaaaggggaaaaggatagggtgcaaaaccactcgtttaaaaatatggggtgcaaaatcgcacaat 1928453  T
Q  99 tagcaaaa 106  Q
    | ||||||    
T  1928454 tggcaaaa 1928461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 10293784 - 10293730
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10293784 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaaca 10293730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 20968897 - 20968951
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20968897 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaaca 20968951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 18875065 - 18875012
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaaca 18875012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 8314119 - 8314047
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| |||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  8314119 aaatcagaaagggggaaaatgatagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaatt 8314047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 9026907 - 9026855
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9026907 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaaca 9026855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 10771629 - 10771537
Alignment:
Q  6 actaaaacacatgggggcctccaaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||||||||| |||| |||||| ||| |||| ||| |||| ||||||||||| |||||||||||| ||  ||||||||||||||    
T  10771629 actaaaacacatgggggccttcaaaccagaaa-gggaaaaatgataggtgtaaaatcgctcggttaaaaacatggagtaaaaaatcgcacaatt 10771537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 27238848 - 27238926
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  27238848 aaatcagaaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 27238926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 48160003 - 48159925
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  48160003 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 48159925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 21896483 - 21896531
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  21896483 gggtgcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaatt 21896531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 42673244 - 42673316
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  42673244 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 42673316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 13657621 - 13657676
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||    
T  13657621 ggggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaaaca 13657676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 47871073 - 47871170
Alignment:
Q  32 cagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacat-ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||| ||||||||||||||||    |||||  | |||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  47871073 cagaaaaggggaaaaagatggggtgcaaaatcgctcaaaaaaaaaagtgggggtgcaaaatcgcacaattagc-aaaagat-agggggaaaagtgcaatt 47871170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 10348775 - 10348825
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  10348775 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 10348825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 18875163 - 18875240
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | |||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  18875163 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgtacaattagc-aaaagatagggggcaaaagtgcaatt 18875240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 27238571 - 27238493
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  || |||||||||||||||||||| |||||    
T  27238571 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaa 27238493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 40848626 - 40848548
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||| |||||||||||||| |||||    
T  40848626 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaa 40848548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 48160309 - 48160359
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  48160309 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 48160359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 4947433 - 4947384
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattga 131  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  4947433 gtgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattga 4947384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 45060774 - 45060826
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  45060774 ggtgcaaaatcgaacaattggcaaaaagat-aggggcaaaagtgcaattgaaca 45060826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1927875 - 1927812
Alignment:
Q  1 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 64  Q
    |||||||||||| |||||||||||| |||| ||| ||||||||||||||| ||||||||||||||    
T  1927875 tcatcactaaaatacatgggggccttcaaaccag-aaaggggaaaaagatagggtgcaaaatcgc 1927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 22429572 - 22429616
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  22429572 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 22429616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 26007259 - 26007215
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  26007259 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 26007215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 42456171 - 42456215
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  42456171 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 42456215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 53687994 - 53687922
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || ||| | ||||||||||||||||||  |||||||||||||||||||||||    
T  53687994 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 53687922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 53766241 - 53766197
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  53766241 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 53766197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 1101090 - 1101144
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||| ||||    
T  1101090 ggggtgcaaaatcgcacaattgacaaaaagat-aggggcaaaagtgcaattaaaca 1101144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 3644720 - 3644775
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||| | ||||  |||||||||||||||| ||||    
T  3644720 ggggtgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaaaca 3644775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 17372473 - 17372528
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||| ||| ||||    
T  17372473 ggggtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaaaca 17372528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 18874935 - 18874885
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattga 131  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  18874935 gggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattga 18874885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 20968967 - 20969068
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||    
T  20968967 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaa-ggggtgcaaaatcgcacaattggc-aaaagataggggggaaaagtgc 20969064  T
Q  126 aatt 129  Q
    ||||    
T  20969065 aatt 20969068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 24485096 - 24485049
Alignment:
Q  58 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||||||||  ||||||||||||||||||||||| |||||    
T  24485096 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 24485049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 42673096 - 42673005
Alignment:
Q  15 catgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||   |||||| ||| ||||||||  || ||| ||||||||| ||||||||||  ||||||||||||||||||||||| |||||    
T  42673096 catgggggccataaaatcataaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 42673005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 3353527 - 3353577
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  3353527 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 3353577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 17372360 - 17372303
Alignment:
Q  71 aaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||| ||||||||||||||||||||||||||||| ||| |||| ||| ||||||||    
T  17372360 aaaaacagggggtgcaaaatcgcacaattagcaaaaa-atagggggaaaaggtgcaatt 17372303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 24485436 - 24485486
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||||| |||||||  ||||||||||||||||||||||| |||||    
T  24485436 gcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaa 24485486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 40848937 - 40848987
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||| |||||    
T  40848937 gcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaa 40848987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 47666283 - 47666361
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  |||||||||||||| |||||||| |||||    
T  47666283 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaa 47666361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 53688251 - 53688329
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  |||| |||||||||||||||||| |||||    
T  53688251 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaa 53688329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 3353202 - 3353161
Alignment:
Q  58 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  3353202 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaatt 3353161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 14015873 - 14015926
Alignment:
Q  82 gtgcaaaatcgcacaattagcaaaaagata-aggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||| ||||    
T  14015873 gtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaaaca 14015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 3644781 - 3644832
Alignment:
Q  77 atggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| |||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaa-ataagggggaaaaatgcaatt 3644832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 36180660 - 36180588
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  ||||| |||||||||||||||||    
T  36180660 aaatcagaaagggggaaaactataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaatt 36180588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 36180968 - 36181016
Alignment:
Q  57 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| ||||    
T  36180968 aaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaa 36181016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 22429264 - 22429185
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  || ||||||||| |||||||||| ||||||    
T  22429264 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaa 22429185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 10293909 - 10293958
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  10293909 ggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtgcaatt 10293958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 14015957 - 14015991
Alignment:
Q  72 aaaacatggggtgcaaaatcgcacaattagcaaaa 106  Q
    |||| ||||||||||||||||||||||||||||||    
T  14015957 aaaagatggggtgcaaaatcgcacaattagcaaaa 14015991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 17440934 - 17440880
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||| ||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||    
T  17440934 gggttcaaaatcgcacaattggcaaaaatatatggggcaaaaatgcaattaaaca 17440880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 20968800 - 20968723
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||| | |||||||| |||| ||| ||||||||    
T  20968800 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaggtgcaatt 20968723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 26007567 - 26007645
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||  ||||||||||| |||||| |||||    
T  26007567 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaa 26007645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 10293715 - 10293642
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||    
T  10293715 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 10293642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 47871005 - 47871049
Alignment:
Q  84 gcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||    
T  47871005 gcaaaatcgcacaattggcaaaaagat-aggggcaaaagtgtaatt 47871049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 1101087 - 1101115
Alignment:
Q  200 gagggggtgcaaaatcgcacaattgacaa 228  Q
    |||||||||||||||||||||||||||||    
T  1101087 gagggggtgcaaaatcgcacaattgacaa 1101115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 10293665 - 10293637
Alignment:
Q  200 gagggggtgcaaaatcgcacaattgacaa 228  Q
    |||||||||||||||||||||||||||||    
T  10293665 gagggggtgcaaaatcgcacaattgacaa 10293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 1297 - 1351
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1297 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 1351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 1367 - 1469
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || |||||||| |||| ||||||||    
T  1367 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggc-aaaagatagggggaaaaagtgc 1465  T
Q  126 aatt 129  Q
    ||||    
T  1466 aatt 1469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 1200 - 1123
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  1200 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaac-aaaagatagggggaaaaagtgcaatt 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 6575 - 6628
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6575 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 6628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 6644 - 6745
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  6644 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagat-agggggaaaagtgc 6741  T
Q  126 aatt 129  Q
    ||||    
T  6742 aatt 6745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 6448 - 6399
Alignment:
Q  79 ggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  6448 ggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 25247 - 25300
Alignment:
Q  81 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25247 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 25300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 25316 - 25418
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  25316 aaatcagaaatggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgc 25414  T
Q  126 aatt 129  Q
    ||||    
T  25415 aatt 25418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 45684 - 45738
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45684 gggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaaca 45738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 45754 - 45855
Alignment:
Q  28 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgc 125  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| || ||||||| ||||| ||||||||    
T  45754 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggc-aaaagat-agggggaaaagtgc 45851  T
Q  126 aatt 129  Q
    ||||    
T  45852 aatt 45855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 1e-18; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 439072 - 439021
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  439072 tgcaaaattgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 439021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 439012 - 438935
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  439012 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 438935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 183544 - 183595
Alignment:
Q  83 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||| ||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaaca 183595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 439173 - 439248
Alignment:
Q  51 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||    ||||| | ||| |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  439173 gggtgcaaaatcgctcaa--aaaaagaggggatgcaaaatcgcacaattagc-aaaagataaggggaaaaagtgcaatt 439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 183626 - 183711
Alignment:
Q  43 aaaaagatgggtgcaaaatcgctcgtttaaa-aacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    ||||||||||||||||||||||||   |||| || | ||||||| |||||||||||||||| |||| ||| |||| ||||||||||||    
T  183626 aaaaagatgggtgcaaaatcgctcaaataaagaagagggggtgc-aaatcgcacaattagc-aaaatataggggggaaaagtgcaatt 183711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 1658 - 1604
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1658 gggtgcaaaatcgcacaattagcaaaaagataagagacaaaagtgcaattgaaca 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 412090 - 412044
Alignment:
Q  88 aatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  412090 aatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaaca 412044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 411979 - 411951
Alignment:
Q  200 gagggggtgcaaaatcgcacaattgacaa 228  Q
    |||||||||||||||||||||||||||||    
T  411979 gagggggtgcaaaatcgcacaattgacaa 411951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 6749 - 6806
Alignment:
Q  77 atggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||    
T  6749 atggggtgcaaaatcatagaattagcaaaaaaataaggggcaaaagtgcaattgaaca 6806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 436 - 364
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||    
T  436 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaatt 364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 739 - 789
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  739 gcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaa 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 19698 - 19648
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  19698 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 19648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 185250 - 185300
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  185250 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 185300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 184945 - 184876
Alignment:
Q  28 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 96  Q
    |||||||||| ||||||||  || |||| |||||||||||||||||||  |||||||||||||| |||||    
T  184945 aaatcagaaagggggaaaactataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcaca 184876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 38643 - 38721
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||| |||||||| |  ||||||||||||||||||||||| |||||    
T  38643 aaatcagaaagggggaaaactatagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaa 38721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 38329 - 38285
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    |||||||||||| |||||||  ||||| |||||||||||||||||    
T  38329 gcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaatt 38285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 17030 - 16976
Alignment:
Q  80 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    ||||||||||||| ||||||||  |||||||| ||| ||||||||||||||||||    
T  17030 gggtgcaaaatcgtacaattagagaaaagataggggacaaaagtgcaattgaaca 16976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 50151 - 50107
Alignment:
Q  55 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 99  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||    
T  50151 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaatt 50107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 73146 - 73086
Alignment:
Q  74 aacatggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaaca 134  Q
    |||| |||||||||||||||||| ||  |||||||||| ||| ||||||||||||| ||||    
T  73146 aacagggggtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaaaca 73086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 10012 - 9933
Alignment:
Q  28 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacat-ggggtgcaaaatcgcacaattagcaaa 105  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  || |||||| |||||||||||||| |||||    
T  10012 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaa 9933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 7510 - 7460
Alignment:
Q  77 atggggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 129  Q
    |||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  7510 atggggtgcaaaatcgcataattagc-aaaagat-aggggaaaaagtgcaatt 7460  T

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