View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5576-Insertion-10 (Length: 278)
Name: NF5576-Insertion-10
Description: NF5576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5576-Insertion-10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 278
Target Start/End: Original strand, 31549451 - 31549722
Alignment:
| Q |
7 |
agcaagatcatctttctgctttgtggcctcttcttgagaagactattaaatgaaccaagttcaataacttaggtcacaagaaattgtattgaacaaaata |
106 |
Q |
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| T |
31549451 |
agcaagatcatctttctgctttgtggcctcttcttgagaagactattaaatgaaccaagttcaataacttaggtcacaagaaattgtattgaacaaaata |
31549550 |
T |
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| Q |
107 |
ttatatacaatttgaatcatcttcaaagtatatcatattcaacgtagttaacattatcttcgtctaaacattcgcagaagaagataaagaatgagtaaat |
206 |
Q |
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| T |
31549551 |
ttatatacaatttgaatcatcttcaaagtatatcatattcaacgtagttaacattatcttcgtctaaacattcgcagaagaagataaagaatgagtaaat |
31549650 |
T |
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| Q |
207 |
cttagcctattctaacttgaattccagttgaaaagaatcacatgtgaaagcagaacttacaatggataaagt |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31549651 |
cttagcctattctaacttgaattccagttgaaaagaatcacatgtgaaagcagaacttacaatggataaagt |
31549722 |
T |
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