View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5578_high_10 (Length: 241)
Name: NF5578_high_10
Description: NF5578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5578_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 41 - 234
Target Start/End: Complemental strand, 37413701 - 37413507
Alignment:
| Q |
41 |
aatcttgttgtactttattgtaactagtttttt-gtctctctcaaaaactccatgtgttattagatgttgttcattatcagtaaactcctccttcagttt |
139 |
Q |
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| T |
37413701 |
aatcttgttgtactttattgtaactagtttttttgtctctctcaaaaactccatgtgttattagatgctgttcattatcagtaaactcctccttcagctt |
37413602 |
T |
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| Q |
140 |
caactttgtcactctctttcaaagtcaaattgtttccctgtctctccggttctaattataccttcaacattatacaatttcataacttcatctca |
234 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
37413601 |
caactttgtcactctctttcaaagtcaaattgtttccctgtctctccggttctaattataccttcaacattatacaatttcataacttcttctca |
37413507 |
T |
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