View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5578_high_8 (Length: 267)
Name: NF5578_high_8
Description: NF5578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5578_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 40368988 - 40368868
Alignment:
| Q |
27 |
ttagataactcataacaccaatttgatcataaattaagaggaaaatcatatggtctagttattaaatttcttatctatttaaagttttgaaaaatttaca |
126 |
Q |
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| T |
40368988 |
ttagataactcataacaccaatttgat---aaattaagaggaaaatcatatggtctagtttttaaatttcttatctatttaaagttttgaaaaatttaca |
40368892 |
T |
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| Q |
127 |
ataatatttgtaagtttagtggat |
150 |
Q |
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| T |
40368891 |
ataatatttgtaagtttagtggat |
40368868 |
T |
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