View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5579_high_2 (Length: 817)

Name: NF5579_high_2
Description: NF5579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5579_high_2
NF5579_high_2
[»] chr2 (5 HSPs)
chr2 (459-809)||(34415814-34416163)
chr2 (251-446)||(34416207-34416402)
chr2 (90-206)||(34417144-34417260)
chr2 (10-93)||(34417598-34417681)
chr2 (561-619)||(815691-815749)
[»] chr7 (4 HSPs)
chr7 (559-718)||(25879589-25879749)
chr7 (590-661)||(18043127-18043198)
chr7 (311-446)||(48374137-48374273)
chr7 (527-573)||(8920496-8920542)
[»] chr1 (3 HSPs)
chr1 (560-719)||(15499466-15499626)
chr1 (561-647)||(35989968-35990056)
chr1 (470-757)||(44323159-44323448)
[»] chr3 (3 HSPs)
chr3 (464-652)||(36337524-36337714)
chr3 (253-357)||(20506598-20506701)
chr3 (309-404)||(36337334-36337430)
[»] chr4 (3 HSPs)
chr4 (326-446)||(1656181-1656301)
chr4 (311-397)||(2033044-2033132)
chr4 (383-446)||(16741889-16741952)
[»] scaffold0376 (2 HSPs)
scaffold0376 (290-349)||(6986-7045)
scaffold0376 (467-582)||(7207-7322)
[»] chr6 (2 HSPs)
chr6 (462-652)||(33555079-33555271)
chr6 (758-809)||(33554919-33554970)
[»] chr5 (5 HSPs)
chr5 (459-660)||(16490061-16490262)
chr5 (561-620)||(32695140-32695199)
chr5 (570-652)||(1431187-1431269)
chr5 (385-446)||(22407654-22407715)
chr5 (326-399)||(22407734-22407807)
[»] chr8 (1 HSPs)
chr8 (561-652)||(32124382-32124475)


Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 459 - 809
Target Start/End: Complemental strand, 34416163 - 34415814
Alignment:
Q  459 aagtgaaaaatgaatgaatatgttaaatcatacaaggttatttatcaccataaacctatctaagaccataactatggtcaaaggaaacatttacaaccct 558  Q
    ||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||     
T  34416163 aagtgaagaacgaatgaatatgttaaatcatagaaggttatttataaccataaacctatctaagaccgtaactacggtcaaaggaaacatttacaacccc 34416064  T
Q  559 taaaccgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccacagtctgggatgattcagattatatatgccga 658  Q
    ||| |||| |||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  34416063 taagccgatcaaaaatgtattaaacccactacaa-ccgtccaaacatttggtgtaacgtcactgtccacagtctaggatgattcggattatatataccga 34415965  T
Q  659 aatactcaccaaaatttcgaaatatataatctgaactgttccaaactatgtttaaccttgaattttgaagggttctcattgtgaataacataggaaaaag 758  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||| ||| ||||||||||||| ||||| ||||||||||||||||||| | ||||||||||    
T  34415964 aatactcaccaaaatttcgaattatataatccgaaatgttccagactgtgtttaaccttgatttttggagggttctcattgtgaatatcgtaggaaaaag 34415865  T
Q  759 tacaaaacataattcaacggtataaacaacgtaataacataaatgatgatg 809  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34415864 tagaaaacataattcaacggtataaacaacataataacataaatgatgatg 34415814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 251 - 446
Target Start/End: Complemental strand, 34416402 - 34416207
Alignment:
Q  251 tatttgttccgattatgaaatacaaaccatattatagggatttttagattctaaaattcaaaacataacaaaataaaagaaaatgtgtcgtaattgatat 350  Q
    ||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34416402 tattttttccgaatataaaattcaaaccatattatagggatttttagattctaaaattcgaaacataacaaaataaaagaaaatgtgtcgtaattgatat 34416303  T
Q  351 taaaggtctacgttgactgtcatgcagtccccgcataaactgcaaagcagtttcagatatcgtatgagcggtcagtagtgaccataatctcataaa 446  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||||    
T  34416302 taaaggtatacgttgactgtcatgcagtccccgcattaactgcaaagccgtttcagagatcgtatgagcggtcagcagtgaccataatgtcataaa 34416207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 34417260 - 34417144
Alignment:
Q  90 ctatttagcctagaatcgacaatagtggaaggtggattgcaatttgcattctgccttaatcttcctttctactgtgattttctgaattgacaacggtact 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  34417260 ctatttagcctagaatcgacaatagtggaaggtggattgcaatttgcattccgccttaatcttcttttctactgtgattttgtgaattgacaacggtact 34417161  T
Q  190 tcacatagaaggtaata 206  Q
    |||||||||||||||||    
T  34417160 tcacatagaaggtaata 34417144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 34417681 - 34417598
Alignment:
Q  10 caccaacaacatgaaagaaattgtaggagagaatccaagttctaccactgaaacacgagttctttgtttaaatgggtcacctat 93  Q
    |||||||||| | |||||||| |||||||||||||||| | ||| |||| ||||||||||| ||| ||||||||| ||||||||    
T  34417681 caccaacaacttaaaagaaatggtaggagagaatccaaatcctatcactaaaacacgagttatttatttaaatggatcacctat 34417598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 815691 - 815749
Alignment:
Q  561 aaccgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtca 619  Q
    ||||||||||||||||||||||  ||| |||||||||| |||| || |||| |||||||    
T  815691 aaccgaccaaaaatgcattaaacacaccacaaaccgtctaaacctttggtgaaacgtca 815749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 559 - 718
Target Start/End: Original strand, 25879589 - 25879749
Alignment:
Q  559 taaaccgaccaaaaatg-cattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccacagtctgggatgattcagattatatatgccg 657  Q
    ||||||||||||||||  |||||||  ||| |||||| ||| |||| || ||||||| ||||   |||||||||||||||| ||  |||||||||||| |    
T  25879589 taaaccgaccaaaaataacattaaacacaccacaaacagtctaaacctttggtgtaatgtcatcatccacagtctgggatggtttggattatatatgctg 25879688  T
Q  658 aaatactcaccaaaatttcgaaatatataatctgaactgttccaaactatgtttaaccttg 718  Q
    |||  |||| ||| |||||  | |||||||| |||||||||||  ||||||||||||||||    
T  25879689 aaagtctcagcaacatttcagattatataatttgaactgttccggactatgtttaaccttg 25879749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 590 - 661
Target Start/End: Original strand, 18043127 - 18043198
Alignment:
Q  590 caaaccgtccaaacattcggtgtaacgtcactgtccacagtctgggatgattcagattatatatgccgaaat 661  Q
    ||||||||||||||  | ||||||||  || ||||||||||||||||||||| |||||||||||| ||||||    
T  18043127 caaaccgtccaaaccgttggtgtaactacattgtccacagtctgggatgatttagattatatatgtcgaaat 18043198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 311 - 446
Target Start/End: Original strand, 48374137 - 48374273
Alignment:
Q  311 aaacataacaaaataaa-agaaaatgtgtcgtaattgatattaaaggtctacgttgactgtcatgcagtccccgcataaactgcaaagcagtttcagata 409  Q
    ||||||| |||| |||| ||||| |||||| |||||||||| ||||||||  | || | ||| | || ||||||||||||||||||| || ||||||| |    
T  48374137 aaacatagcaaattaaatagaaagtgtgtcataattgatatcaaaggtcttggctgtccgtcgtacaatccccgcataaactgcaaaacaatttcagaga 48374236  T
Q  410 tcgtatgagcggtcagtagtgaccataatctcataaa 446  Q
    |  |||||||| || | ||| ||||| || |||||||    
T  48374237 ttatatgagcgatcggcagtaaccatgatatcataaa 48374273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 527 - 573
Target Start/End: Original strand, 8920496 - 8920542
Alignment:
Q  527 taactatggtcaaaggaaacatttacaacccttaaaccgaccaaaaa 573  Q
    ||||||| ||||||||||||||||||||  | |||||||||||||||    
T  8920496 taactatagtcaaaggaaacatttacaatgcataaaccgaccaaaaa 8920542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 719
Target Start/End: Original strand, 15499466 - 15499626
Alignment:
Q  560 aaaccgaccaaaaatg-cattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccacagtctgggatgattcagattatatatgccga 658  Q
    |||||||||||||| | |||||||  ||| | ||||||||||| |||| ||||||||| |||  ||||||||||| |||| |||| |||||||||||  |    
T  15499466 aaaccgaccaaaaacgacattaaacacaccataaaccgtccaagcatttggtgtaacgccacaatccacagtctgtgatggttcatattatatatgcaaa 15499565  T
Q  659 aatactcaccaaaatttcgaaatatataatctgaactgttccaaactatgtttaaccttga 719  Q
    ||| ||||   | |||||  | ||||||||||||||||| ||  ||| |||||||||||||    
T  15499566 aatcctcagtgacatttcagattatataatctgaactgtccctgactgtgtttaaccttga 15499626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 35990056 - 35989968
Alignment:
Q  561 aaccgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccac--agtctgggatgattcagatt 647  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||| |||| |||| |||  |||||  ||||||||||| ||| ||||    
T  35990056 aaccgaccaaaaatgcattaaacacaccacaaaccgtccaaacattgggtgaaacgccacaatccacctagtctgggatgtttcggatt 35989968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 470 - 757
Target Start/End: Complemental strand, 44323448 - 44323159
Alignment:
Q  470 gaatgaatatgttaaatcatacaaggttatttatcaccataaacctatctaagaccataactatggtcaaaggaaa-catttacaacccttaaaccgacc 568  Q
    ||||||||||||| || |||||| || |||||||  |||||||||||||  ||    ||| ||| |||||| |||| | |||||||  | ||||| ||||    
T  44323448 gaatgaatatgttgaagcatacatggctatttatagccataaacctatcctagcatgtaattatagtcaaacgaaatcgtttacaatgcctaaactgacc 44323349  T
Q  569 aaaaatg-cattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccacagtctgggatgattcagattatatatgccgaaatactcac 667  Q
    ||||||  |||||||  ||| |||||| ||||| || || |||| || | ||  ||||| ||| ||||| | || |||||||||||| |||  | || |     
T  44323348 aaaaataacattaaacacaccacaaactgtccatacctttggtgcaaggccatcgtccatagtttgggaaggtttagattatatatgtcgagttccttag 44323249  T
Q  668 caaaatttcgaaatatataatctgaactgttccaaactatgtttaaccttgaattttgaagggttctcattgtgaataacataggaaaaa 757  Q
     || |||||  | ||||||||||||||||| ||||||| ||| ||| |||||   ||| ||||||||||| |||||||| ||||||||||    
T  44323248 aaacatttcagattatataatctgaactgtcccaaactgtgtataagcttgatcattggagggttctcatggtgaataaaataggaaaaa 44323159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 464 - 652
Target Start/End: Original strand, 36337524 - 36337714
Alignment:
Q  464 aaaaatgaatgaatatgttaaatcatacaaggttatttatcaccataaacctatctaagaccataactatggtcaaaggaaacatttacaacccttaaac 563  Q
    ||||||||||||||||||| || ||| || |  |||| || ||||||||||||||  ||    ||||||  ||| |||||||| |||| ||  | |||||    
T  36337524 aaaaatgaatgaatatgttgaagcatgcatgactattcataaccataaacctatcataggttgtaactacagtcgaaggaaacgtttagaatgcataaac 36337623  T
Q  564 cgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtcca--cagtctgggatgattcagattatata 652  Q
    |||| ||||||||||||||  ||| ||||||||||||||| || ||||||| |||||  ||||  |||||| ||| | |||||||||||||    
T  36337624 cgactaaaaatgcattaaacacaccacaaaccgtccaaactttgggtgtaatgtcacattccatgcagtctaggaggtttcagattatata 36337714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 20506598 - 20506701
Alignment:
Q  253 tttgttccgattatgaaatacaaaccatattatagggatttttagattctaaaattcaaaacataacaaaataaaagaaaatgtgtcgtaattgatatta 352  Q
    ||||||| |||||||||||   || ||||||  |||||||||  ||||||||||||| |||||| |||||||||||| |||||||| ||||||| ||| |    
T  20506598 tttgttcggattatgaaatctgaatcatattggagggattttcggattctaaaattcgaaacat-acaaaataaaaggaaatgtgttgtaattggtatca 20506696  T
Q  353 aaggt 357  Q
    |||||    
T  20506697 aaggt 20506701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 309 - 404
Target Start/End: Original strand, 36337334 - 36337430
Alignment:
Q  309 caaaacataacaaaataaa-agaaaatgtgtcgtaattgatattaaaggtctacgttgactgtcatgcagtccccgcataaactgcaaagcagtttc 404  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||  |||||  ||| |||| ||| ||||||||| |||||||| ||||    
T  36337334 caaaacataacaaaataaatagaaagtgtatcgtaattgatatcaaaggtctttgttgatcgtcgtgcaatcctcgcataaacggcaaagcaatttc 36337430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 326 - 446
Target Start/End: Complemental strand, 1656301 - 1656181
Alignment:
Q  326 aaagaaaatgtgtcgtaattgatattaaaggtctacgttgactgtcatgcagtccccgcataaactgcaaagcagtttcagatatcgtatgagcggtcag 425  Q
    ||||||| ||||||||| ||||||| |||  | || |||||| | | | || |||||||||||||||||||||| ||||||  || ||||||| |||||     
T  1656301 aaagaaattgtgtcgtatttgatatcaaacatgtatgttgacagacgtacaatccccgcataaactgcaaagcaatttcagggattgtatgaggggtcaa 1656202  T
Q  426 tagtgaccataatctcataaa 446  Q
    |||||||||| || |||||||    
T  1656201 tagtgaccatgatatcataaa 1656181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 397
Target Start/End: Original strand, 2033044 - 2033132
Alignment:
Q  311 aaacataacaaaataaaa--gaaaatgtgtcgtaattgatattaaaggtctacgttgactgtcatgcagtccccgcataaactgcaaag 397  Q
    ||||||||||||||||||  |||| || |||||||||||||| || |||||  |||||| ||| | || ||||| ||||||||||||||    
T  2033044 aaacataacaaaataaaaaagaaagtgagtcgtaattgatatcaagggtctctgttgaccgtcgtacaatccccacataaactgcaaag 2033132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 16741952 - 16741889
Alignment:
Q  383 gcataaactgcaaagcagtttcagatatcgtatgagcggtcagtagtgaccataatctcataaa 446  Q
    ||||||||||||||||| |||  || || |||||||||||||| ||||||||| || |||||||    
T  16741952 gcataaactgcaaagcaattttcgagattgtatgagcggtcagcagtgaccatgatatcataaa 16741889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 6986 - 7045
Alignment:
Q  290 atttttagattctaaaattcaaaacataacaaaataaaagaaaatgtgtcgtaattgata 349  Q
    |||||| |||||||||||   |||||||||||||||||||||||||||| ||||||||||    
T  6986 atttttggattctaaaatctgaaacataacaaaataaaagaaaatgtgttgtaattgata 7045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 582
Target Start/End: Original strand, 7207 - 7322
Alignment:
Q  467 aatgaatgaatatgttaaatcatacaaggttatttatcaccataaacctatctaagaccataactatggtcaaaggaaacatttacaacccttaaaccga 566  Q
    |||||||||||||||| || ||| ||||| |||||||  ||||||| |||||  |||   ||||||  |||||||| ||| |||||||  | ||| ||||    
T  7207 aatgaatgaatatgttgaagcatgcaaggctatttatagccataaaactatcctagattgtaactacagtcaaagggaacgtttacaatgcctaagccga 7306  T
Q  567 ccaaaaatgcattaaa 582  Q
    ||||| ||||||||||    
T  7307 ccaaatatgcattaaa 7322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 462 - 652
Target Start/End: Complemental strand, 33555271 - 33555079
Alignment:
Q  462 tgaaaaatgaatgaatatgttaaatcatacaaggttatttatcaccataaacctatctaagaccataactatggtcaaaggaaacatttacaacccttaa 561  Q
    |||| |||||||||||||||| || ||| ||||| |||||||  | |||||| ||||  ||||  ||||||  ||||||||| |  |||||||  | |||    
T  33555271 tgaagaatgaatgaatatgttgaaccatgcaaggctatttatagctataaacatatcctagactgtaactacagtcaaaggatatgtttacaatgcataa 33555172  T
Q  562 accgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtc--cacagtctgggatgattcagattatata 652  Q
    |   |||||||||||||||||| ||| ||||||||| ||||| || ||||| ||| |||  ||  |||||||||||| | ||| |||||||||    
T  33555171 ataaaccaaaaatgcattaaatacaccacaaaccgttcaaaccttgggtgttacgccacaatccacacagtctgggaggtttcggattatata 33555079  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 758 - 809
Target Start/End: Complemental strand, 33554970 - 33554919
Alignment:
Q  758 gtacaaaacataattcaacggtataaacaacgtaataacataaatgatgatg 809  Q
    ||||||||||||||||||| | ||||||||| ||||||||||| ||||||||    
T  33554970 gtacaaaacataattcaacagcataaacaacataataacataagtgatgatg 33554919  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000005; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 459 - 660
Target Start/End: Complemental strand, 16490262 - 16490061
Alignment:
Q  459 aagtgaaaaatgaatgaatatgttaaatcatacaaggttatttatcaccataaacctatctaagaccataactatggtcaaaggaaacatttacaaccct 558  Q
    ||||||| ||||||| ||||||||| | ||| ||||  |||||||  |||||||  ||||  ||||  ||||||   |||||||| || ||||| |  |     
T  16490262 aagtgaagaatgaattaatatgttataacatgcaagactatttatagccataaaattatcctagactgtaactacattcaaaggatacgtttacgatgcc 16490163  T
Q  559 taaaccgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccacagtctgggatgattcagattatatatgccga 658  Q
    |||||||||||||||| |||||||  ||| |||||||||| |||| || ||||||| | ||   |||| | |||||||||  ||||| ||||||||||||    
T  16490162 taaaccgaccaaaaatacattaaacacaccacaaaccgtcaaaacctttggtgtaatgccatcatccataatctgggatggctcagaatatatatgccga 16490063  T
Q  659 aa 660  Q
    ||    
T  16490062 aa 16490061  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 561 - 620
Target Start/End: Original strand, 32695140 - 32695199
Alignment:
Q  561 aaccgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcac 620  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||| || |||| ||||||||    
T  32695140 aaccgtccaaaaatgcattaaatacaccacaaaccgtccaaacttttggtgaaacgtcac 32695199  T

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Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 652
Target Start/End: Original strand, 1431187 - 1431269
Alignment:
Q  570 aaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccacagtctgggatgattcagattatata 652  Q
    |||||||||||||  ||||||||||||||||| |||||  | ||||| |||  |||||| ||||||||| |||| ||||||||    
T  1431187 aaaatgcattaaacacactacaaaccgtccaaccattccttataacgccacaatccacattctgggatggttcaaattatata 1431269  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 22407715 - 22407654
Alignment:
Q  385 ataaactgcaaagcagtttcagatatcgtatgagcggtcagtagtgaccataatctcataaa 446  Q
    |||||||||||| || || |||| || |||||||||||||| ||||||||| || |||||||    
T  22407715 ataaactgcaaaccaattgcagagattgtatgagcggtcagcagtgaccatgatatcataaa 22407654  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 399
Target Start/End: Complemental strand, 22407807 - 22407734
Alignment:
Q  326 aaagaaaatgtgtcgtaattgatattaaaggtctacgttgactgtcatgcagtccccgcataaactgcaaagca 399  Q
    ||||||| |||||| || ||||||| ||||||||  | |||||||| | || ||||| ||||||||||||||||    
T  22407807 aaagaaattgtgtcatatttgatatcaaaggtctctgctgactgtcgtacaatccccacataaactgcaaagca 22407734  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 561 - 652
Target Start/End: Complemental strand, 32124475 - 32124382
Alignment:
Q  561 aaccgaccaaaaatgcattaaatccactacaaaccgtccaaacattcggtgtaacgtcactgtccac--agtctgggatgattcagattatata 652  Q
    ||||||||||||||||||||||  ||| | ||||||||||||  || |||| |||||||  || |||  ||||||||| | |||||||||||||    
T  32124475 aaccgaccaaaaatgcattaaagacacaaaaaaccgtccaaatcttgggtgaaacgtcatagtgcacatagtctgggaggtttcagattatata 32124382  T

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