View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5579_low_11 (Length: 211)
Name: NF5579_low_11
Description: NF5579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5579_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 48080982 - 48080810
Alignment:
| Q |
26 |
gctcgcttatccttttgtacactttccaattttattgatttctttagctccaattcttcaagtgtacccacccatgagtgctaagtctcttaaacccata |
125 |
Q |
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| T |
48080982 |
gctcgcttatccttttgtacactttccaattttattgatttctttagctccaattcttcaagtgtacccacccatgagtgctaagtctcttaaacccata |
48080883 |
T |
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| Q |
126 |
atcacaaggaaatgttaaaagtacatgtaaaataaaaacctaaattctaaacatgctaccccgtgttcatctc |
198 |
Q |
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| T |
48080882 |
atcacaaggaaatattaaaagtacatgtaaaataaaaacctaaattctaaacatgctaccccatgttcttctc |
48080810 |
T |
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