View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5581-Insertion-6 (Length: 427)

Name: NF5581-Insertion-6
Description: NF5581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5581-Insertion-6
NF5581-Insertion-6
[»] chr1 (82 HSPs)
chr1 (237-357)||(25990664-25990784)
chr1 (237-357)||(44875095-44875215)
chr1 (238-395)||(15285683-15285839)
chr1 (237-357)||(28017574-28017694)
chr1 (237-354)||(38942565-38942682)
chr1 (237-357)||(40219973-40220092)
chr1 (238-357)||(23873952-23874071)
chr1 (238-357)||(35941757-35941876)
chr1 (239-351)||(4529109-4529221)
chr1 (237-357)||(46949237-46949357)
chr1 (237-343)||(47996884-47996990)
chr1 (237-354)||(29488667-29488784)
chr1 (237-354)||(40935737-40935854)
chr1 (237-354)||(40960598-40960715)
chr1 (237-395)||(43656161-43656317)
chr1 (237-354)||(49924338-49924455)
chr1 (244-396)||(9127921-9128072)
chr1 (237-400)||(26907213-26907375)
chr1 (239-357)||(28916641-28916759)
chr1 (237-354)||(18036464-18036580)
chr1 (240-395)||(18852102-18852256)
chr1 (237-361)||(35189112-35189237)
chr1 (237-357)||(26479655-26479775)
chr1 (239-349)||(18913472-18913582)
chr1 (237-351)||(39026370-39026484)
chr1 (237-354)||(31970433-31970549)
chr1 (246-357)||(6848439-6848548)
chr1 (240-354)||(45358003-45358117)
chr1 (241-361)||(36383840-36383960)
chr1 (69-184)||(18913301-18913416)
chr1 (67-184)||(39026200-39026317)
chr1 (68-184)||(23873783-23873898)
chr1 (68-184)||(46949410-46949525)
chr1 (237-341)||(15311110-15311213)
chr1 (67-184)||(18852312-18852428)
chr1 (67-184)||(25990837-25990953)
chr1 (67-184)||(40935568-40935684)
chr1 (105-184)||(43656029-43656108)
chr1 (68-184)||(49924508-49924623)
chr1 (68-184)||(40960430-40960545)
chr1 (67-177)||(26479835-26479945)
chr1 (69-184)||(26907048-26907162)
chr1 (67-184)||(29488837-29488953)
chr1 (67-184)||(38942395-38942512)
chr1 (105-184)||(15285892-15285971)
chr1 (102-184)||(28916504-28916586)
chr1 (69-184)||(44875268-44875382)
chr1 (67-184)||(6848265-6848380)
chr1 (74-184)||(35189290-35189400)
chr1 (284-357)||(35884138-35884211)
chr1 (74-177)||(35941937-35942039)
chr1 (67-184)||(28017747-28017861)
chr1 (244-359)||(44056429-44056545)
chr1 (105-176)||(9128140-9128211)
chr1 (102-184)||(15311266-15311348)
chr1 (69-184)||(18036633-18036747)
chr1 (69-184)||(31970266-31970380)
chr1 (69-184)||(40220145-40220262)
chr1 (105-177)||(47997050-47997122)
chr1 (102-176)||(35884308-35884382)
chr1 (67-164)||(45357830-45357928)
chr1 (238-354)||(16661437-16661554)
chr1 (238-305)||(25185426-25185492)
chr1 (243-354)||(35366330-35366442)
chr1 (243-359)||(37538726-37538843)
chr1 (243-354)||(7397629-7397740)
chr1 (237-307)||(15912169-15912238)
chr1 (238-351)||(41063666-41063780)
chr1 (238-359)||(43359607-43359729)
chr1 (237-309)||(44510340-44510411)
chr1 (102-149)||(4529300-4529347)
chr1 (250-354)||(51339032-51339137)
chr1 (308-354)||(4672802-4672848)
chr1 (238-307)||(5858493-5858561)
chr1 (250-354)||(51840630-51840735)
chr1 (308-354)||(6785359-6785405)
chr1 (237-290)||(42724082-42724134)
chr1 (325-354)||(43667498-43667527)
chr1 (274-354)||(44149010-44149090)
chr1 (292-354)||(45840223-45840287)
chr1 (314-354)||(15959858-15959898)
chr1 (238-354)||(34102095-34102210)
[»] chr7 (75 HSPs)
chr7 (237-354)||(45598822-45598939)
chr7 (237-357)||(35181107-35181227)
chr7 (237-357)||(43107984-43108105)
chr7 (237-357)||(41889086-41889206)
chr7 (237-357)||(23106367-23106488)
chr7 (237-354)||(41815772-41815889)
chr7 (237-349)||(23731483-23731595)
chr7 (237-354)||(19933134-19933251)
chr7 (237-354)||(19964273-19964390)
chr7 (240-357)||(34808134-34808251)
chr7 (237-354)||(36576336-36576453)
chr7 (237-354)||(47383324-47383441)
chr7 (237-353)||(21654200-21654316)
chr7 (238-354)||(44600364-44600480)
chr7 (237-359)||(40560295-40560417)
chr7 (241-350)||(3157358-3157467)
chr7 (237-349)||(40583068-40583180)
chr7 (237-357)||(48879303-48879423)
chr7 (237-359)||(32491186-32491307)
chr7 (239-357)||(48937970-48938086)
chr7 (239-357)||(48942996-48943112)
chr7 (237-357)||(42617586-42617706)
chr7 (237-342)||(22111409-22111514)
chr7 (68-184)||(43107816-43107931)
chr7 (237-353)||(39348708-39348824)
chr7 (69-184)||(42617759-42617874)
chr7 (69-184)||(3157524-3157638)
chr7 (69-184)||(18206231-18206345)
chr7 (69-184)||(35181280-35181394)
chr7 (260-354)||(9818399-9818491)
chr7 (260-354)||(10720324-10720416)
chr7 (76-176)||(22111248-22111348)
chr7 (68-184)||(23106541-23106656)
chr7 (76-176)||(40583241-40583341)
chr7 (237-354)||(39337445-39337565)
chr7 (69-184)||(19932967-19933081)
chr7 (239-357)||(41890323-41890459)
chr7 (68-177)||(9818563-9818671)
chr7 (68-177)||(10720488-10720596)
chr7 (102-184)||(41890187-41890269)
chr7 (69-184)||(41889259-41889373)
chr7 (105-176)||(7989255-7989326)
chr7 (103-182)||(44600536-44600615)
chr7 (238-354)||(30082282-30082387)
chr7 (102-184)||(32491051-32491133)
chr7 (68-184)||(47383494-47383609)
chr7 (237-306)||(18206398-18206467)
chr7 (105-177)||(41815640-41815712)
chr7 (67-184)||(21654031-21654147)
chr7 (68-177)||(40560477-40560585)
chr7 (115-184)||(19964151-19964220)
chr7 (237-310)||(35084180-35084253)
chr7 (104-184)||(23731648-23731730)
chr7 (102-177)||(48879483-48879558)
chr7 (237-298)||(33153013-33153074)
chr7 (105-184)||(45598992-45599072)
chr7 (238-306)||(28608338-28608407)
chr7 (107-184)||(34808307-34808384)
chr7 (103-184)||(36576506-36576585)
chr7 (243-360)||(39170451-39170568)
chr7 (243-306)||(18800859-18800922)
chr7 (67-183)||(35084010-35084126)
chr7 (293-351)||(7989425-7989483)
chr7 (238-307)||(31769083-31769151)
chr7 (238-307)||(35888090-35888158)
chr7 (106-176)||(2633326-2633396)
chr7 (244-306)||(29236153-29236215)
chr7 (241-282)||(7989391-7989432)
chr7 (248-354)||(22369148-22369255)
chr7 (274-354)||(47778675-47778755)
chr7 (243-286)||(28941277-28941320)
chr7 (106-177)||(48937838-48937908)
chr7 (238-300)||(6882378-6882439)
chr7 (237-285)||(37767139-37767187)
chr7 (238-354)||(38260237-38260355)
[»] chr8 (67 HSPs)
chr8 (237-357)||(35259976-35260096)
chr8 (237-357)||(27621049-27621169)
chr8 (237-354)||(24612602-24612719)
chr8 (237-357)||(37597989-37598109)
chr8 (237-354)||(11043979-11044096)
chr8 (237-359)||(25321708-25321830)
chr8 (237-354)||(27752508-27752625)
chr8 (241-354)||(33851149-33851262)
chr8 (237-357)||(35344285-35344406)
chr8 (237-357)||(35346426-35346546)
chr8 (237-354)||(3099874-3099992)
chr8 (237-340)||(44358613-44358716)
chr8 (237-354)||(44052542-44052660)
chr8 (239-397)||(32678633-32678790)
chr8 (237-354)||(36537980-36538097)
chr8 (237-349)||(39187159-39187272)
chr8 (237-357)||(44411331-44411452)
chr8 (240-395)||(11992609-11992764)
chr8 (241-332)||(37567557-37567648)
chr8 (68-184)||(35344459-35344575)
chr8 (67-184)||(35260149-35260265)
chr8 (67-184)||(37598161-37598277)
chr8 (69-184)||(11044149-11044263)
chr8 (241-357)||(12108088-12108204)
chr8 (69-184)||(27752678-27752792)
chr8 (237-305)||(31133151-31133219)
chr8 (68-184)||(11992820-11992935)
chr8 (69-176)||(31132986-31133090)
chr8 (68-184)||(44411163-44411278)
chr8 (69-184)||(27621222-27621336)
chr8 (67-177)||(25321539-25321648)
chr8 (104-176)||(35346293-35346365)
chr8 (69-184)||(3100045-3100159)
chr8 (237-293)||(34713511-34713567)
chr8 (244-319)||(40487794-40487868)
chr8 (102-184)||(24612467-24612549)
chr8 (103-177)||(34713627-34713701)
chr8 (102-184)||(36538150-36538232)
chr8 (103-177)||(44052720-44052794)
chr8 (237-303)||(2238715-2238781)
chr8 (105-184)||(12108247-12108326)
chr8 (241-354)||(16635497-16635610)
chr8 (296-357)||(31133765-31133826)
chr8 (238-354)||(8673302-8673418)
chr8 (69-177)||(39187332-39187436)
chr8 (239-306)||(24510819-24510886)
chr8 (241-354)||(16635361-16635478)
chr8 (247-329)||(16635786-16635871)
chr8 (241-329)||(16643195-16643284)
chr8 (241-290)||(41426325-41426374)
chr8 (237-354)||(17314750-17314868)
chr8 (68-141)||(32678471-32678544)
chr8 (241-343)||(16635640-16635746)
chr8 (246-354)||(17713143-17713252)
chr8 (241-307)||(34899894-34899959)
chr8 (248-354)||(5217312-5217419)
chr8 (238-307)||(25195169-25195237)
chr8 (237-305)||(17336713-17336780)
chr8 (243-307)||(41362435-41362498)
chr8 (243-351)||(28497641-28497750)
chr8 (243-354)||(26954520-26954632)
chr8 (237-348)||(27819585-27819697)
chr8 (134-184)||(37567450-37567500)
chr8 (238-307)||(41791583-41791651)
chr8 (308-359)||(30576040-30576091)
chr8 (308-354)||(13144174-13144220)
chr8 (314-354)||(13143665-13143705)
[»] chr4 (69 HSPs)
chr4 (237-357)||(3043254-3043374)
chr4 (237-357)||(39970076-39970196)
chr4 (237-357)||(52712976-52713096)
chr4 (237-357)||(53677566-53677686)
chr4 (237-357)||(9798162-9798282)
chr4 (239-354)||(38940785-38940900)
chr4 (237-354)||(32012414-32012531)
chr4 (237-354)||(50768361-50768478)
chr4 (237-357)||(10591590-10591709)
chr4 (237-357)||(29180499-29180619)
chr4 (237-357)||(30776571-30776691)
chr4 (237-357)||(30777400-30777520)
chr4 (237-357)||(49901939-49902060)
chr4 (238-354)||(38187814-38187930)
chr4 (237-357)||(43980411-43980531)
chr4 (238-354)||(37788367-37788483)
chr4 (239-357)||(1619942-1620060)
chr4 (237-354)||(55937790-55937907)
chr4 (240-351)||(29899634-29899745)
chr4 (237-343)||(51495079-51495182)
chr4 (239-354)||(27750437-27750552)
chr4 (69-184)||(30777573-30777688)
chr4 (67-184)||(43980584-43980700)
chr4 (239-354)||(30012041-30012157)
chr4 (69-184)||(9797995-9798109)
chr4 (68-184)||(10591422-10591537)
chr4 (68-183)||(29180331-29180445)
chr4 (68-184)||(30776403-30776518)
chr4 (237-308)||(47807157-47807228)
chr4 (69-184)||(39969909-39970023)
chr4 (69-177)||(29899808-29899915)
chr4 (102-184)||(55937655-55937737)
chr4 (68-169)||(28681760-28681860)
chr4 (68-184)||(3043086-3043201)
chr4 (105-184)||(37788537-37788616)
chr4 (237-354)||(5222380-5222502)
chr4 (102-183)||(38940956-38941037)
chr4 (105-183)||(53677434-53677512)
chr4 (67-158)||(38187646-38187736)
chr4 (69-184)||(50768531-50768645)
chr4 (67-184)||(51495235-51495350)
chr4 (105-184)||(32012282-32012361)
chr4 (307-357)||(47806811-47806861)
chr4 (238-354)||(23978230-23978347)
chr4 (75-184)||(47807281-47807388)
chr4 (102-184)||(49902113-49902195)
chr4 (105-184)||(52713141-52713220)
chr4 (244-354)||(46070641-46070753)
chr4 (106-183)||(5222249-5222326)
chr4 (237-319)||(5234089-5234171)
chr4 (238-354)||(8013204-8013321)
chr4 (238-354)||(37911804-37911921)
chr4 (237-307)||(38140826-38140896)
chr4 (241-343)||(17236342-17236446)
chr4 (244-354)||(28318538-28318649)
chr4 (238-359)||(49080170-49080294)
chr4 (68-184)||(1620115-1620231)
chr4 (237-288)||(17799248-17799299)
chr4 (250-354)||(47516318-47516423)
chr4 (243-354)||(53848387-53848499)
chr4 (257-354)||(28142755-28142854)
chr4 (314-354)||(26916257-26916297)
chr4 (115-163)||(27750313-27750361)
chr4 (238-354)||(8178354-8178470)
chr4 (116-183)||(17236262-17236329)
chr4 (248-307)||(40553738-40553796)
chr4 (308-354)||(16605040-16605086)
chr4 (238-351)||(32410252-32410365)
chr4 (238-359)||(40411016-40411138)
[»] chr2 (67 HSPs)
chr2 (237-360)||(28424187-28424310)
chr2 (237-359)||(4033795-4033917)
chr2 (237-357)||(792476-792596)
chr2 (238-354)||(38549764-38549880)
chr2 (238-357)||(29514140-29514259)
chr2 (237-354)||(21539676-21539793)
chr2 (240-361)||(35832324-35832445)
chr2 (237-357)||(8784311-8784431)
chr2 (237-360)||(14565493-14565617)
chr2 (247-395)||(15858740-15858887)
chr2 (237-354)||(33635255-33635372)
chr2 (241-395)||(43075629-43075782)
chr2 (241-357)||(29514599-29514714)
chr2 (237-359)||(28492434-28492556)
chr2 (237-357)||(5091660-5091782)
chr2 (237-343)||(22162249-22162356)
chr2 (237-354)||(4091929-4092047)
chr2 (237-349)||(44803823-44803934)
chr2 (237-351)||(10478097-10478214)
chr2 (237-354)||(18834030-18834149)
chr2 (69-184)||(792309-792423)
chr2 (61-172)||(15858634-15858744)
chr2 (69-184)||(21539846-21539960)
chr2 (67-184)||(14565324-14565440)
chr2 (67-184)||(10979258-10979374)
chr2 (68-184)||(4092100-4092215)
chr2 (68-184)||(10478267-10478382)
chr2 (237-354)||(15068665-15068771)
chr2 (68-176)||(35832509-35832616)
chr2 (67-184)||(43075839-43075954)
chr2 (68-184)||(8784484-8784600)
chr2 (102-184)||(38549628-38549710)
chr2 (69-184)||(43451594-43451708)
chr2 (266-351)||(10979114-10979198)
chr2 (239-323)||(9294605-9294689)
chr2 (68-176)||(33635433-33635540)
chr2 (69-169)||(38071403-38071502)
chr2 (69-177)||(44803994-44804101)
chr2 (237-354)||(43451435-43451541)
chr2 (102-184)||(28492609-28492691)
chr2 (103-184)||(5091526-5091607)
chr2 (238-354)||(26998239-26998356)
chr2 (69-169)||(29513973-29514071)
chr2 (68-184)||(29514427-29514542)
chr2 (243-354)||(38070918-38071030)
chr2 (238-344)||(20380055-20380162)
chr2 (120-184)||(4033678-4033742)
chr2 (238-306)||(13822891-13822959)
chr2 (69-184)||(28424360-28424476)
chr2 (67-152)||(38564668-38564752)
chr2 (238-354)||(32273593-32273710)
chr2 (250-332)||(38071571-38071658)
chr2 (68-184)||(18833861-18833977)
chr2 (238-354)||(32010024-32010141)
chr2 (243-339)||(33933045-33933143)
chr2 (243-354)||(44442055-44442165)
chr2 (274-359)||(40808888-40808975)
chr2 (238-354)||(9709436-9709552)
chr2 (238-354)||(11031044-11031161)
chr2 (246-339)||(4891768-4891862)
chr2 (308-359)||(5280692-5280743)
chr2 (274-354)||(25571947-25572029)
chr2 (106-184)||(9294744-9294822)
chr2 (238-307)||(8032790-8032858)
chr2 (237-290)||(12872107-12872160)
chr2 (274-354)||(18454968-18455048)
chr2 (314-354)||(45085191-45085231)
[»] chr3 (77 HSPs)
chr3 (239-357)||(1335027-1335145)
chr3 (240-395)||(55400618-55400772)
chr3 (237-357)||(21654161-21654282)
chr3 (237-357)||(23513484-23513604)
chr3 (237-357)||(26641195-26641315)
chr3 (237-357)||(31126129-31126249)
chr3 (238-395)||(45781276-45781433)
chr3 (237-357)||(46580453-46580573)
chr3 (241-359)||(13541192-13541310)
chr3 (237-354)||(46819969-46820086)
chr3 (237-357)||(53020099-53020220)
chr3 (237-343)||(46296160-46296266)
chr3 (237-360)||(28793075-28793199)
chr3 (241-357)||(37324171-37324291)
chr3 (237-359)||(51255103-51255223)
chr3 (237-347)||(52172093-52172204)
chr3 (237-351)||(43575881-43575994)
chr3 (239-357)||(51426534-51426654)
chr3 (262-354)||(16739263-16739355)
chr3 (67-184)||(21654335-21654451)
chr3 (240-354)||(36189092-36189206)
chr3 (237-354)||(32322322-32322439)
chr3 (67-184)||(32322153-32322269)
chr3 (67-184)||(55400828-55400944)
chr3 (68-184)||(26641027-26641142)
chr3 (273-354)||(34022541-34022622)
chr3 (67-177)||(53020280-53020389)
chr3 (102-177)||(31126309-31126384)
chr3 (102-177)||(46580632-46580707)
chr3 (69-177)||(34022696-34022803)
chr3 (237-307)||(49068018-49068088)
chr3 (102-184)||(45347661-45347743)
chr3 (67-177)||(37323997-37324106)
chr3 (238-306)||(52252004-52252072)
chr3 (105-184)||(49068141-49068220)
chr3 (67-184)||(46295990-46296107)
chr3 (238-354)||(22456089-22456206)
chr3 (238-354)||(22479135-22479252)
chr3 (105-176)||(28793260-28793331)
chr3 (102-165)||(46820143-46820206)
chr3 (68-165)||(51426728-51426824)
chr3 (69-184)||(16739081-16739190)
chr3 (67-161)||(23514554-23514648)
chr3 (237-354)||(23209360-23209478)
chr3 (238-354)||(21214161-21214278)
chr3 (307-395)||(49066993-49067080)
chr3 (243-354)||(10251931-10252043)
chr3 (102-184)||(43576047-43576129)
chr3 (244-354)||(38401300-38401411)
chr3 (243-349)||(49583890-49583997)
chr3 (243-354)||(47444059-47444174)
chr3 (105-184)||(1335200-1335279)
chr3 (238-354)||(2994499-2994616)
chr3 (105-184)||(51255276-51255355)
chr3 (243-354)||(10114832-10114943)
chr3 (300-354)||(45347814-45347868)
chr3 (238-333)||(48291763-48291859)
chr3 (118-184)||(52252126-52252192)
chr3 (67-160)||(13541347-13541439)
chr3 (238-354)||(34194808-34194925)
chr3 (238-354)||(54725684-54725801)
chr3 (238-307)||(30454805-30454873)
chr3 (69-183)||(51309504-51309618)
chr3 (67-184)||(36188920-36189036)
chr3 (122-184)||(45781487-45781549)
chr3 (240-290)||(51309397-51309447)
chr3 (238-307)||(7886698-7886766)
chr3 (246-307)||(29676536-29676596)
chr3 (244-307)||(7615008-7615070)
chr3 (244-307)||(10014238-10014300)
chr3 (238-304)||(8097099-8097164)
chr3 (325-354)||(33974747-33974776)
chr3 (308-357)||(50730010-50730059)
chr3 (238-270)||(3972286-3972318)
chr3 (238-270)||(3997560-3997592)
chr3 (262-306)||(34105500-34105544)
chr3 (314-354)||(54465068-54465108)
[»] chr6 (26 HSPs)
chr6 (237-357)||(12278622-12278742)
chr6 (237-357)||(17721930-17722050)
chr6 (237-357)||(10227828-10227948)
chr6 (237-355)||(374017-374135)
chr6 (237-359)||(30949049-30949171)
chr6 (237-395)||(30766325-30766482)
chr6 (237-357)||(33756172-33756292)
chr6 (238-351)||(17598215-17598328)
chr6 (238-354)||(31887243-31887360)
chr6 (68-183)||(10228002-10228116)
chr6 (68-184)||(30949224-30949339)
chr6 (68-184)||(17721762-17721877)
chr6 (69-184)||(5121410-5121524)
chr6 (69-184)||(30766535-30766649)
chr6 (69-184)||(374188-374302)
chr6 (106-184)||(12278795-12278873)
chr6 (238-339)||(3888362-3888464)
chr6 (237-303)||(32882814-32882880)
chr6 (243-354)||(5300720-5300831)
chr6 (238-354)||(4031907-4032024)
chr6 (238-307)||(16524349-16524417)
chr6 (116-176)||(17598390-17598450)
chr6 (258-354)||(5822162-5822260)
chr6 (238-305)||(4987914-4987980)
chr6 (237-299)||(16655172-16655233)
chr6 (69-163)||(31887074-31887168)
[»] chr5 (49 HSPs)
chr5 (237-357)||(31690741-31690861)
chr5 (238-357)||(8146135-8146254)
chr5 (238-357)||(13146647-13146766)
chr5 (241-395)||(37066348-37066501)
chr5 (237-356)||(30086669-30086788)
chr5 (237-399)||(20914736-20914897)
chr5 (244-354)||(35462846-35462956)
chr5 (237-357)||(42364957-42365073)
chr5 (237-351)||(8541685-8541799)
chr5 (237-354)||(24439493-24439610)
chr5 (239-357)||(12638808-12638925)
chr5 (239-351)||(8143858-8143970)
chr5 (241-353)||(24432525-24432637)
chr5 (240-343)||(31316925-31317028)
chr5 (237-354)||(16286204-16286321)
chr5 (258-354)||(25962594-25962690)
chr5 (69-184)||(31316755-31316869)
chr5 (69-184)||(8145967-8146081)
chr5 (237-357)||(20452543-20452664)
chr5 (67-184)||(30086498-30086616)
chr5 (68-184)||(25962401-25962516)
chr5 (237-344)||(17825319-17825425)
chr5 (105-184)||(24432389-24432468)
chr5 (102-176)||(12638988-12639062)
chr5 (67-170)||(35462671-35462773)
chr5 (237-306)||(2002254-2002323)
chr5 (103-184)||(20914950-20915031)
chr5 (72-177)||(8541521-8541625)
chr5 (105-184)||(16286072-16286151)
chr5 (103-177)||(13146827-13146901)
chr5 (102-184)||(42365126-42365208)
chr5 (238-339)||(3463937-3464040)
chr5 (105-177)||(37066212-37066284)
chr5 (238-354)||(28906990-28907107)
chr5 (238-354)||(28943385-28943502)
chr5 (103-170)||(31690607-31690674)
chr5 (302-357)||(32433573-32433628)
chr5 (243-354)||(8506359-8506471)
chr5 (238-339)||(8959577-8959679)
chr5 (238-351)||(16153467-16153581)
chr5 (243-339)||(1144624-1144720)
chr5 (243-339)||(10154055-10154152)
chr5 (243-359)||(29307317-29307433)
chr5 (237-307)||(35275346-35275415)
chr5 (308-354)||(38130328-38130374)
chr5 (275-354)||(41625689-41625770)
chr5 (314-354)||(842753-842793)
chr5 (275-354)||(42273552-42273632)
chr5 (244-272)||(42273654-42273682)
[»] scaffold0495 (2 HSPs)
scaffold0495 (237-357)||(4547-4666)
scaffold0495 (68-183)||(4720-4834)
[»] scaffold0330 (1 HSPs)
scaffold0330 (241-339)||(3105-3204)
[»] scaffold0774 (1 HSPs)
scaffold0774 (314-354)||(3615-3655)
[»] scaffold0565 (1 HSPs)
scaffold0565 (244-359)||(6003-6116)
[»] scaffold0018 (1 HSPs)
scaffold0018 (314-354)||(154795-154835)


Alignment Details
Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 25990784 - 25990664
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25990784 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattggtcttttttgctt 25990685  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  25990684 atattttgagacaaagaatat 25990664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 44875215 - 44875095
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  44875215 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctt 44875116  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  44875115 atattttgagacaaagaatat 44875095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 238 - 395
Target Start/End: Complemental strand, 15285839 - 15285683
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  15285839 gagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatggcataaaaattggtcttttttgctta 15285740  T
Q  338 tattttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    |||||||||||||||||||| | |        ||||||||||||||||||||||||||    
T  15285739 tattttgagacaaagaatatgaga-tttttttgcttatattttaagacggagggagta 15285683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 28017694 - 28017574
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28017694 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgatcttttttgctt 28017595  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||||||| |||||||||    
T  28017594 atattttgagataaagaatat 28017574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 38942565 - 38942682
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38942565 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataatagcataaaagttgatcttttttgctt 38942664  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  38942665 atattttgagacaaagaa 38942682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 40220092 - 40219973
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  40220092 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat-atttgtttgaaaaaacataataatagcataaaaattagtcttttttgctt 40219994  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  40219993 atattttgagacaaagaatat 40219973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 23873952 - 23874071
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||    
T  23873952 gagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgcgta 23874051  T
Q  338 tattttgagacaaagaatat 357  Q
    ||||||||||||||||||||    
T  23874052 tattttgagacaaagaatat 23874071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 35941876 - 35941757
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  35941876 gagaacaaattgaatgcaatttgtatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttgattttttttgctta 35941777  T
Q  338 tattttgagacaaagaatat 357  Q
    ||||||||||||||||||||    
T  35941776 tattttgagacaaagaatat 35941757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 4529221 - 4529109
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  4529221 agaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttatttgaaaaaacataataatagcataaaagttgatcttttttgcttat 4529122  T
Q  339 attttgagacaaa 351  Q
    |||||||||||||    
T  4529121 attttgagacaaa 4529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 46949357 - 46949237
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  46949357 ggagaacaaattgaatacaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataataacataaaagttggtcttttttgctt 46949258  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  46949257 atattttgagacaaagaatat 46949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 237 - 343
Target Start/End: Complemental strand, 47996990 - 47996884
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47996990 ggagaacaaattgaatacaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 47996891  T
Q  337 atatttt 343  Q
    |||||||    
T  47996890 atatttt 47996884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 29488784 - 29488667
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  29488784 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaatattatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctt 29488685  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  29488684 atattttgagacaaagaa 29488667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 40935737 - 40935854
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  40935737 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaagaaacataaaaatagcataaaagttgatcttttttgctt 40935836  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  40935837 atattttgagacaaagaa 40935854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 40960598 - 40960715
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  40960598 ggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgatcttttttgctt 40960697  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  40960698 atattttgagacaaagaa 40960715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 395
Target Start/End: Original strand, 43656161 - 43656317
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||| |||    
T  43656161 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatgacataaaagttgat-ttttttcctt 43656259  T
Q  337 atattttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||||||||||||||||||||| | |        ||||||||||||||||||||||||||    
T  43656260 atattttgagacaaagaatatgaga-tttttttgcttatattttaagacggagggagta 43656317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 49924455 - 49924338
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  49924455 ggagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgatcttttttgctt 49924356  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  49924355 atattttgagacaaagaa 49924338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 244 - 396
Target Start/End: Complemental strand, 9128072 - 9127921
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatatttt 343  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  9128072 aaattgaatgcaatttacatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcataaaagttggtcttttttgcttatatttt 9127973  T
Q  344 gagacaaagaatataaaannnnnnnngcttatattttaagacggagggagtac 396  Q
    |||||||||||||| | |        |||||||||||||||||||||||||||    
T  9127972 gagacaaagaatatgaga-tttttttgcttatattttaagacggagggagtac 9127921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 237 - 400
Target Start/End: Original strand, 26907213 - 26907375
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  26907213 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaagataatttgtttgaaaaaacataataatagcataaaagttggtcttttttactt 26907312  T
Q  337 atattttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagtacttat 400  Q
    |||||||||||||||||| || | |        |||||||||||||||||||||||||| ||||    
T  26907313 atattttgagacaaagaaaatgaga-tttttttgcttatattttaagacggagggagtatttat 26907375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 28916641 - 28916759
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||    
T  28916641 agaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataatagcataaaagtttgtcttttttacttat 28916740  T
Q  339 attttgagacaaagaatat 357  Q
    ||||||||||||| |||||    
T  28916741 attttgagacaaaaaatat 28916759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 18036580 - 18036464
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  18036580 ggagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtctttttt-ctt 18036482  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  18036481 atattttgagacaaagaa 18036464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 240 - 395
Target Start/End: Complemental strand, 18852256 - 18852102
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||| | | |||||| ||||||||    
T  18852256 gaacaaattgaatgcaatttgcatttaattttacattggaaaaaataatttgtttgaaaaaacataataatgacataaaagtaggtcttttatgcttata 18852157  T
Q  340 ttttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    |||||||||||||||||| | |        ||||||||||||||||||||||||||    
T  18852156 ttttgagacaaagaatatgaga-tttttttgcttatattttaagacggagggagta 18852102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 237 - 361
Target Start/End: Complemental strand, 35189237 - 35189112
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa-cataataatagcataaaaattgatcttttttgct 335  Q
    |||||||| ||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||| ||| |||||||||||    
T  35189237 ggagaacacattgaatgcaatttgtagttaattttacattgaaaaagattatttgtttgaaaaaaacataataataccataaaagttggtcttttttgct 35189138  T
Q  336 tatattttgagacaaagaatataaaa 361  Q
    ||||||||||||||||||||||||||    
T  35189137 tatattttgagacaaagaatataaaa 35189112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 26479775 - 26479655
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| | ||||||| ||    
T  26479775 ggagaacatattgaatgcaattttcattgaattttacattggaaaagatgatttgtttgaaaaaatataataatggcataaaagttggttttttttgttt 26479676  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  26479675 atattttgagacaaagaatat 26479655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 239 - 349
Target Start/End: Original strand, 18913472 - 18913582
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| | ||||||||||||    
T  18913472 agaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaagatagcatcaaaattggtattttttgcttat 18913571  T
Q  339 attttgagaca 349  Q
    |||||||||||    
T  18913572 attttgagaca 18913582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 39026370 - 39026484
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  39026370 ggagaataaattaaatgcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacataaaaatagcataaaagttggtcttttttgctt 39026469  T
Q  337 atattttgagacaaa 351  Q
    |||||||||||||||    
T  39026470 atattttgagacaaa 39026484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 31970433 - 31970549
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| |||||||||||| |||    
T  31970433 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaagacataaaaataacataaaagttgatctttttt-ctt 31970531  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||| ||||||||    
T  31970532 atattttgatacaaagaa 31970549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 6848439 - 6848548
Alignment:
Q  246 attgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgcttatattttg 344  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    ||||||||||||||||||||    
T  6848439 attgaatgcaatttgcatttaattttagattggaaaagatgatttgttagaaaaaaacataataatagcataaaaa---gtcttttttgcttatattttg 6848535  T
Q  345 agacaaagaatat 357  Q
    |||||||||||||    
T  6848536 agacaaagaatat 6848548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 240 - 354
Target Start/End: Original strand, 45358003 - 45358117
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    ||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| | |||||||||||||    
T  45358003 gaacaaattaaatgcaacatgtatttaattttacattggaaaagatgatttgtttgaaataacataaaaatagcataaaagttggttttttttgcttata 45358102  T
Q  340 ttttgagacaaagaa 354  Q
    |||||||||||||||    
T  45358103 ttttgagacaaagaa 45358117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 36383960 - 36383840
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgttt-gaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  36383960 aacaaattgaatgcaatttgcatttaattttactttggaaa-gatgatttttttagaaaaaacataataataacataaaagttgatcttttttgcttata 36383862  T
Q  340 ttttgagacaaagaatataaaa 361  Q
    ||||| |||||| || ||||||    
T  36383861 ttttgtgacaaataaaataaaa 36383840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 18913301 - 18913416
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18913301 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 18913400  T
Q  169 tgaaataagattcatg 184  Q
     | |||||| ||||||    
T  18913401 cggaataagtttcatg 18913416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 39026200 - 39026317
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||     
T  39026200 tatactccctccgtcctaatttataagcaaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttctt 39026299  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  39026300 cttgaaataagtttcatg 39026317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 23873783 - 23873898
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  23873783 atactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 23873881  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  23873882 ttggaataagtttcatg 23873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 46949525 - 46949410
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  46949525 atactccctccgtcctaatttataagcaaaaaa-cactaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcc 46949427  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  46949426 ttggaataagtttcatg 46949410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 15311213 - 15311110
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||| ||| | |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| ||    
T  15311213 ggagaacaaattgaatacaact-gcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataacagcataaaagttgatcttttttgttt 15311115  T
Q  337 atatt 341  Q
    |||||    
T  15311114 atatt 15311110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 18852428 - 18852312
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||||| |||||||||||||       |||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  18852428 tatactccctccgttctaatttataagcaaaaaa-cactaattcacacttattaagaaagctaacagttagtgatttgaggtataattttttgtgttctc 18852330  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  18852329 cttgaaataagtttcatg 18852312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 25990953 - 25990837
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       || ||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  25990953 tatactccctccgtcctaatttataagcaaaaaa-cattaaatcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 25990855  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  25990854 cttggaataagtttcatg 25990837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 40935568 - 40935684
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  40935568 tatactccctccatcctaatttataagcaaaaaa-cactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctc 40935666  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  40935667 cttggaataagtttcatg 40935684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 43656029 - 43656108
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  43656029 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatg 43656108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 49924623 - 49924508
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||||||||||||||||||||||        || ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| |    
T  49924623 atactccctccgtcctaatttataag-taaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttc 49924525  T
Q  168 ttgaaataagattcatg 184  Q
    |||||||||| ||||||    
T  49924524 ttgaaataagtttcatg 49924508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 40960430 - 40960545
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||| |||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||    
T  40960430 atactccttccgtcctaatttataagcaaaaaa-cactaattcacatttattaagaaaactaacacttagtgatttgaggcatgattttttgtgttctcc 40960528  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  40960529 ttggaataagtttcatg 40960545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 26479945 - 26479835
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||| ||||||| |||||||||||||       || ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  26479945 tatacttcctccgttctaatttataagcaaaaaaacaataattcacacttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttctc 26479846  T
Q  167 cttgaaataag 177  Q
    ||| |||||||    
T  26479845 cttaaaataag 26479835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 26907048 - 26907162
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||| | ||| ||||||||||||||| |||||||||||||||    
T  26907048 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctcct 26907146  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  26907147 tggaataagtttcatg 26907162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 29488953 - 29488837
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||||||||||||||||||        |||||||||||| ||||||||||||| |||| ||||||||||||||||||| || ||||||||||    
T  29488953 tatactccctccgtcctaatttataag-tcaaaaacactaattcacacttattaagaaaacgaacacttagtgatttgaggtataatttgttgtgttctc 29488855  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  29488854 cttggaataagtttcatg 29488837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 38942395 - 38942512
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||| ||||||| ||| |||||||||       || ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  38942395 tatacttcctccgttctattttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 38942494  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  38942495 cttggaataagtttcatg 38942512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 15285971 - 15285892
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  15285971 taattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctccttgaaataagtttcatg 15285892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 28916504 - 28916586
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||| ||||||    
T  28916504 cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaataagtttcatg 28916586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 44875382 - 44875268
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||| ||||||||||||||||||||       |||||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  44875382 tactctctccgtcctaatttataagcaaaaaa-cactaattcacacttactaagaaaactaacacttagtgatttgaggtataaatttttgtgttctcct 44875284  T
Q  169 tgaaataagattcatg 184  Q
    |  |||||| ||||||    
T  44875283 tagaataagtttcatg 44875268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 6848265 - 6848380
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||| ||||||||||||||        |||||||||||||||||||| |||||||| | ||||||||||||||||| | |||||||||||||    
T  6848265 tatactccctccatcctaatttataag-aaaaaaacactaattcacatttattaa-aaaactaataattagtgatttgaggtatgattttttgtgttctc 6848362  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  6848363 cttgaaataagtttcatg 6848380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 35189400 - 35189290
Alignment:
Q  74 cctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaa-ctaacatttagtgatttgaggtataactttttgtgttctccttgaa 172  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||| |||||| ||||||    
T  35189400 cctccgtcctaatttataagcaaaaaa-cactaattcacatttattaagaaaaactaacacttagtaatttgaggtataattttttatgttcttcttgaa 35189302  T
Q  173 ataagattcatg 184  Q
    ||||| ||||||    
T  35189301 ataagtttcatg 35189290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 35884211 - 35884138
Alignment:
Q  284 atgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaatat 357  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||    
T  35884211 atgatttgtttgaaaaaatataataatagcataaaagttggtcttttttgcttatattttaagataaagaatat 35884138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 35942039 - 35941937
Alignment:
Q  74 cctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaa 173  Q
    |||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||| | ||||||||||||| |||||||| |||||||||||    
T  35942039 cctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctccttgaaa 35941941  T
Q  174 taag 177  Q
    ||||    
T  35941940 taag 35941937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 28017861 - 28017747
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||| ||||||||||||||||       || ||||||||| |||||||||||||||||| |||||||||||||||||||  |||| ||| |||    
T  28017861 tatactccctctgtcctaatttataagcaaaaaa-cattaattcacacttattaagaaaactaacacttagtgatttgaggtataa--ttttttgtactc 28017765  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  28017764 cttgaaataagtttcatg 28017747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 359
Target Start/End: Original strand, 44056429 - 44056545
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattga-tcttttttgcttatattt 342  Q
    |||| |||||||| ||||||||||||||||  || ||||||||  || |||||||||||||| ||||||||  |||||||| | ||||||||||||||||    
T  44056429 aaatggaatgcaaattgcatttaattttactctgaaaaagatgggttttttgaaaaaacatattaatagcaggaaaattgatttttttttgcttatattt 44056528  T
Q  343 tgagacaaagaatataa 359  Q
    || ||||||||| ||||    
T  44056529 tgggacaaagaaaataa 44056545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 9128211 - 9128140
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  9128211 taattcacacttattaagaaaattaacacttagtgatttgaggtatacttttttgtgttctccttgaaataa 9128140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 15311348 - 15311266
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||| |||||||||||||||| | ||| ||||||||||||||| ||||||| ||||||||| |||||| ||||||    
T  15311348 cactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtattctccttggaataagtttcatg 15311266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 18036747 - 18036633
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||||||||||||||||||||||        || ||||||| | |||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||    
T  18036747 tactccctccgtcctaatttataag-taaaaaacattaattcatacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttcttct 18036649  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  18036648 tggaataagtttcatg 18036633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 31970266 - 31970380
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||| |||||||||||||||||||        ||||||||||| |||||||||| | ||||| ||||||||||||||||| | |||||||||||||||    
T  31970266 tactccttccgtcctaatttataagcaaaaaat-actaattcacacttattaagaagattaacacttagtgatttgaggtatgattttttgtgttctcct 31970364  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  31970365 tggaataagtttcatg 31970380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 40220262 - 40220145
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagt---gatttgaggtataactttttgtgttct 165  Q
    ||||||||||||||||||||| ||||       || ||||||||| |||||||||||||||||| |||||   |||||||||||||| ||||||||||||    
T  40220262 tactccctccgtcctaatttacaagcaaaaaa-cagtaattcacacttattaagaaaactaacacttagtagtgatttgaggtataattttttgtgttct 40220164  T
Q  166 ccttgaaataagattcatg 184  Q
    ||||| |||||| ||||||    
T  40220163 ccttggaataagtttcatg 40220145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 47997122 - 47997050
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||| | |||||| ||||    
T  47997122 taattcacacttattaagaaaactaacatttagtgatttgaggtattattttttgtgtttttcttgaagtaag 47997050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 35884382 - 35884308
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    ||||| ||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||  |||||||||    
T  35884382 cactagttcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttctttttgaaataa 35884308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 45357830 - 45357928
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnn-cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttc 164  Q
    |||| |||||||||||||||||||||||        || ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  45357830 tataatccctccgtcctaatttataagcaaaaaaaacattaattcacacttattaagacaactaacacttagtgatttgaggtataattttttgtgttc 45357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 16661554 - 16661437
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||||||||||||||||| |||||||||||||||  |||| ||||||| |||| ||||| ||||||||||  ||||  |||| | ||| |||||||||||    
T  16661554 gagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataattaaatatgataacagttggtcttttttgct 16661456  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| || ||||||    
T  16661455 tataatttgggataaagaa 16661437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 25185426 - 25185492
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 305  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  25185426 gagaacaaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaaacata 25185492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 35366330 - 35366442
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| |||| |||||||||| | |||||||| || |||| ||||||| ||||||||  ||||  |||||| |||||||||||||||||||     
T  35366330 caaattgaatgcactttgaatttaatttttctttggaaaatataattt-tttgaaacaacataattaaatatgataaaagttgatcttttttgcttataa 35366428  T
Q  341 tttgagacaaagaa 354  Q
    |||  |||||||||    
T  35366429 ttttggacaaagaa 35366442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 359
Target Start/End: Complemental strand, 37538843 - 37538726
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| |||||| |||||||| |  || ||||||| |||| ||||||| ||||||||  ||||  |||||| ||||||||||||| |||||     
T  37538843 caaattgaatgcactttgcagttaattttcctatgtaaaagataattt-tttgaaacaacataattaaatatgataaaagttgatcttttttgtttataa 37538745  T
Q  341 tttgagacaaagaatataa 359  Q
    |||| ||||||||| ||||    
T  37538744 tttgggacaaagaaaataa 37538726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 7397740 - 7397629
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||||||| ||||  ||||  |||||| ||   ||||||||||||||     
T  7397740 caaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaac-taattaaatatgataaaagttaggcttttttgcttataa 7397643  T
Q  341 tttgagacaaagaa 354  Q
    |||| |||||||||    
T  7397642 tttgggacaaagaa 7397629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 15912238 - 15912169
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    ||||| ||||||||||||| ||||||||||||||| | |||||||| ||||||| ||||||| ||||||||    
T  15912238 ggagagcaaattgaatgcagtttgcatttaatttttctttggaaaaaatgattt-tttgaaataacataat 15912169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 41063780 - 41063666
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||||||||||||||||| ||||||||||||||| | ||| ||||||| |||| ||||||| || |||||  || |  |||||| ||| |||||||| ||    
T  41063780 gagaacaaattgaatgcactttgcatttaatttttctttgaaaaagataattt-tttgaaacaatataattaaaaatgataaaagttggtctttttttct 41063682  T
Q  336 tatattttgagacaaa 351  Q
    |||| |||| ||||||    
T  41063681 tataatttgggacaaa 41063666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 359
Target Start/End: Complemental strand, 43359729 - 43359607
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||| | |||||||||||||||   ||| ||||||| | || ||| ||| ||||||||  ||||  ||||||||| |||||||||| |    
T  43359729 gagagcaaattgaatgtactttgcatttaattttcttttgaaaaagataaatt-tttaaaacaacataattaaatatgataaaaatttatcttttttgtt 43359631  T
Q  336 tatattttgagacaaagaatataa 359  Q
    |||| |||||||||||||| ||||    
T  43359630 tataatttgagacaaagaaaataa 43359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 44510340 - 44510411
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataa 309  Q
    ||||| ||||||||||||| ||||||||||||||| | ||||||||| | |||| ||||||||||||| ||||    
T  44510340 ggagagcaaattgaatgcactttgcatttaattttcctttggaaaaggtaattt-tttgaaaaaacatgataa 44510411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 4529347 - 4529300
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggta 149  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||    
T  4529347 cactaattcatacttattaagaaaactaacacttagtgatttgaggta 4529300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 354
Target Start/End: Original strand, 51339032 - 51339137
Alignment:
Q  250 aatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttgaga 347  Q
    ||||||| |||||||||||||  | |||||||||||||||| |||||||||| |||||  ||||  |||||| ||  |||||||| |||||| |||| ||    
T  51339032 aatgcaaattgcatttaatttctctttggaaaagatgattt-tttgaaaaaatataattaaatataataaaagttagtcttttttacttataatttgcga 51339130  T
Q  348 caaagaa 354  Q
    |||||||    
T  51339131 caaagaa 51339137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 4672848 - 4672802
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  4672848 aataggataaaaatttatcttttttgcttatattttgggacaaagaa 4672802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 5858493 - 5858561
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||||||||||||||| | ||| ||||||| |||| ||||||| ||||||||    
T  5858493 gagagcaaattgaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaacaacataat 5858561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 354
Target Start/End: Original strand, 51840630 - 51840735
Alignment:
Q  250 aatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttgaga 347  Q
    ||||||| |||||||||||||  | |||||||||||||||| |||||||||| |||||  ||||  |||||| ||  |||||||| |||||| |||  ||    
T  51840630 aatgcaaattgcatttaatttctctttggaaaagatgattt-tttgaaaaaatataattaaatataataaaagttagtcttttttacttataatttacga 51840728  T
Q  348 caaagaa 354  Q
    |||||||    
T  51840729 caaagaa 51840735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 6785405 - 6785359
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||| |||||| || ||||||||||||||||||||| |||||||||    
T  6785405 aataggataaaagtttatcttttttgcttatattttgtgacaaagaa 6785359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 42724134 - 42724082
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgattt 290  Q
    ||||| |||||| ||||||||||||||||||||| || || |||||||||||||    
T  42724134 ggagagcaaattaaatgcaatttgcatttaatttcac-tttgaaaagatgattt 42724082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 354
Target Start/End: Original strand, 43667498 - 43667527
Alignment:
Q  325 tcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||||||||||||||||||||||||    
T  43667498 tcttttttgcttatattttgagacaaagaa 43667527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 44149010 - 44149090
Alignment:
Q  274 attggaaaagatgatttgtttgaaaa-aacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||||||||||| ||| |||| || || | ||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  44149010 attggaaaagatgatttttttaaaaacaagatta-aatagaataaaagtttgtcttttttgcttatattttgggacaaagaa 44149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 45840223 - 45840287
Alignment:
Q  292 tttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||||||||||  ||||  |||||| |||| |||||||||||||| |||| |||||||||    
T  45840223 tttgaaaaaacataattaaatatgataaaatttgaacttttttgcttataatttgggacaaagaa 45840287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 15959858 - 15959898
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||  |||||||||||||||||||| |||||||||    
T  15959858 ataaaaatttgtcttttttgcttatattttgggacaaagaa 15959898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 34102095 - 34102210
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| |||||||| |||| ||||||||||||||| | ||| |||||||||||  ||||||| ||||||||  ||||  |||||| ||  ||||||||| |    
T  34102095 gagagcaaattga-tgcactttgcatttaattttcctttgaaaaagatgatt--tttgaaataacataattaaatatgataaaagtttgtcttttttgtt 34102191  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| ||||| ||| ||||    
T  34102192 tataatttgatacagagaa 34102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 45598939 - 45598822
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  45598939 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattagtcttttttgctt 45598840  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  45598839 atattttgagacaaagaa 45598822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 35181227 - 35181107
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  35181227 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctt 35181128  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||| |||||||||||||||    
T  35181127 atattctgagacaaagaatat 35181107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 43107984 - 43108105
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||||||    
T  43107984 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacataaaagttggtcttttttgct 43108083  T
Q  336 tatattttgagacaaagaatat 357  Q
    ||||||||||||||||||||||    
T  43108084 tatattttgagacaaagaatat 43108105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 41889206 - 41889086
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  41889206 ggagaacaaattgaatgcaatttgctttgaattttacattggaaaagatgatttgtttgaaaaaacataataatggcataaaagttgattttttttgctt 41889107  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  41889106 atattttgagacaaagaatat 41889086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 23106488 - 23106367
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatc-ttttttgct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||||    
T  23106488 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttagtctttttttgct 23106389  T
Q  336 tatattttgagacaaagaatat 357  Q
    |||||||||||||||| |||||    
T  23106388 tatattttgagacaaataatat 23106367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 41815772 - 41815889
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||| || |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  41815772 ggagaacaaattgaatgcaacttacatttaattttacattggaaaatatgatttatttgaaaaaacataataatagcataaaagttgatcttttttgctt 41815871  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  41815872 atattttgagacaaagaa 41815889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 349
Target Start/End: Complemental strand, 23731595 - 23731483
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  23731595 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgatcttttttgctt 23731496  T
Q  337 atattttgagaca 349  Q
    |||||||||||||    
T  23731495 atattttgagaca 23731483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 19933134 - 19933251
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  19933134 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtttatcttttttgctt 19933233  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||| ||||||    
T  19933234 atattttgagataaagaa 19933251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 19964273 - 19964390
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  19964273 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtttatcttttttgctt 19964372  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||| ||||||    
T  19964373 atattttgagataaagaa 19964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 34808251 - 34808134
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  34808251 gaacaaattgaatgcaatttgcatttaattttacgttgaaaaagatgatttgtttgaaaaaacataataataacataaaagttggtcttttttgcttata 34808152  T
Q  340 ttttgagacaaagaatat 357  Q
    |||| |||||||||||||    
T  34808151 ttttaagacaaagaatat 34808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 36576453 - 36576336
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||| |||    
T  36576453 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaagtttgtcttttttactt 36576354  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  36576353 atattttgagacaaagaa 36576336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 47383441 - 47383324
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||    
T  47383441 ggagaataaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacataataatatcataaaagttggtattttttgctt 47383342  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  47383341 atattttgagacaaagaa 47383324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 21654200 - 21654316
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || |||||| ||    
T  21654200 ggagaacaaattgaatgtaatttgcatttaattttacattggaaaaggtgatttgtttgaaaaaacataataatagcataaaagttggtcctttttgttt 21654299  T
Q  337 atattttgagacaaaga 353  Q
    |||||||||||||||||    
T  21654300 atattttgagacaaaga 21654316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 44600480 - 44600364
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||    
T  44600480 gagaacaaattgaatgcaacttgcatttaattttacactggaaaagatgatttatttgaaaaaacataataataacataaaagttggtcttttttgctta 44600381  T
Q  338 tattttgagacaaagaa 354  Q
    |||||||||||||||||    
T  44600380 tattttgagacaaagaa 44600364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 237 - 359
Target Start/End: Complemental strand, 40560417 - 40560295
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||    
T  40560417 ggagaataaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaaatgggtcttttttgatt 40560318  T
Q  337 atattttgagacaaagaatataa 359  Q
    |||||||||||||||||| ||||    
T  40560317 atattttgagacaaagaaaataa 40560295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 3157467 - 3157358
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatat 340  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||    
T  3157467 aacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacataataatagcataaaagttagtcttttttgcttatat 3157368  T
Q  341 tttgagacaa 350  Q
    ||||||||||    
T  3157367 tttgagacaa 3157358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 237 - 349
Target Start/End: Complemental strand, 40583180 - 40583068
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||| | ||||||||||    
T  40583180 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacataaaagttggtattttttgctt 40583081  T
Q  337 atattttgagaca 349  Q
    |||||||||||||    
T  40583080 atattttgagaca 40583068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 48879423 - 48879303
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||| |||||||| |||    
T  48879423 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttttttgaaaaaacataataataacataaaagttggtcttttttactt 48879324  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||| ||| ||| |||||    
T  48879323 atattttaagataaaaaatat 48879303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 237 - 359
Target Start/End: Original strand, 32491186 - 32491307
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||    
T  32491186 ggagaacaaattaaatgcaacttgcatttaattttacattcgaaaagatgatttgtttgaaaaaacataa-aatagcataaaagttggttttttttgctt 32491284  T
Q  337 atattttgagacaaagaatataa 359  Q
    ||||||| |||||||||| ||||    
T  32491285 atattttcagacaaagaaaataa 32491307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 48937970 - 48938086
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||   ||||||||||    
T  48937970 agaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcacaaaagttga---tttttgctta 48938066  T
Q  338 tattttgagacaaagaatat 357  Q
    |||||| |||||||||||||    
T  48938067 tattttaagacaaagaatat 48938086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 48942996 - 48943112
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||   ||||||||||    
T  48942996 agaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcacaaaagttga---tttttgctta 48943092  T
Q  338 tattttgagacaaagaatat 357  Q
    |||||| |||||||||||||    
T  48943093 tattttaagacaaagaatat 48943112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 42617706 - 42617586
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| ||||| | ||  ||||||||||||    
T  42617706 ggagcacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacataataatatcataagagtttgtcttttttgctt 42617607  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||||||| |||||||||    
T  42617606 atattttgagaaaaagaatat 42617586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 237 - 342
Target Start/End: Original strand, 22111409 - 22111514
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||| | ||||||||||    
T  22111409 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacataaaagttggtattttttgctt 22111508  T
Q  337 atattt 342  Q
    ||||||    
T  22111509 atattt 22111514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 43107816 - 43107931
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  43107816 atactccctccgtcctaatttataagcaaaaaa-cactaattcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 43107914  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  43107915 ttggaataagtttcatg 43107931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 39348824 - 39348708
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||| | || ||||||| |||| ||||||||||||||| ||| ||||||||||||    
T  39348824 ggagaacaaattgaatacaatttgcatttaattttactttggaaaagattaattttttgaaacaacacaataatagcataaaagttggtcttttttgctt 39348725  T
Q  337 atattttgagacaaaga 353  Q
    ||||||||  |||||||    
T  39348724 atattttggtacaaaga 39348708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 42617874 - 42617759
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| ||||||| |||||||||| ||| ||||||||||||||| |||||||||||||||    
T  42617874 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctcct 42617775  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  42617774 tggaataagtttcatg 42617759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 3157638 - 3157524
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |    
T  3157638 tactccctccgtcctaatttataagcaaaaaa-cactaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctt 3157540  T
Q  169 tgaaataagattcatg 184  Q
    ||||||||| ||||||    
T  3157539 tgaaataagtttcatg 3157524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 18206231 - 18206345
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  18206231 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcct 18206329  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  18206330 tggaataagtttcatg 18206345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 35181394 - 35181280
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  35181394 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcct 35181296  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  35181295 tggaataagtttcatg 35181280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 9818491 - 9818399
Alignment:
Q  260 gcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||| ||| ||||||||||||||||||||||| ||||||    
T  9818491 gcatttaattttacattggaaaagatgatttgtttgaaaaa--aaaataataacataaaagttggtcttttttgcttatattttgagaaaaagaa 9818399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 10720416 - 10720324
Alignment:
Q  260 gcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||| ||| ||||||||||||||||||||||| ||||||    
T  10720416 gcatttaattttacattggaaaagatgatttgtttgaaaaa--aaaataataacataaaagttggtcttttttgcttatattttgagaaaaagaa 10720324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 22111248 - 22111348
Alignment:
Q  76 tccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaata 175  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  22111248 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 22111347  T
Q  176 a 176  Q
    |    
T  22111348 a 22111348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 23106656 - 23106541
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||| ||||||||||||        ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  23106656 atactccctccgtcttaatttataagcaaaaaat-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 23106558  T
Q  168 ttgaaataagattcatg 184  Q
    || ||||||| ||||||    
T  23106557 ttaaaataagtttcatg 23106541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 40583341 - 40583241
Alignment:
Q  76 tccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaata 175  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  40583341 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 40583242  T
Q  176 a 176  Q
    |    
T  40583241 a 40583241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 39337565 - 39337445
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgttt---gaaaaaacataataatagcataaaaattgatcttttttg 333  Q
    ||||||||| |||||||||||||||||||| |||||  |||||||||||||||| |||   |||| |||| ||||||||||||||| ||| | |||||||    
T  39337565 ggagaacaatttgaatgcaatttgcatttagttttaatttggaaaagatgattttttttttgaaacaacacaataatagcataaaagttggtattttttg 39337466  T
Q  334 cttatattttgagacaaagaa 354  Q
    ||||||||||| |||||||||    
T  39337465 cttatattttgggacaaagaa 39337445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 19932967 - 19933081
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||| ||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  19932967 tactctctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcct 19933065  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  19933066 tggaataagtttcatg 19933081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 41890323 - 41890459
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa------------------cataataatagcataaaaa 320  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||                  |||||||||||||||||||    
T  41890323 agaacaaattgaatgtaatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaaacataataatacgttcaccataataatagcataaaaa 41890422  T
Q  321 ttgatcttttttgcttatattttgagacaaagaatat 357  Q
    ||| |||||||||||||||||||||||||||||||||    
T  41890423 ttggtcttttttgcttatattttgagacaaagaatat 41890459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 9818671 - 9818563
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||| |||||||||||        |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  9818671 atactccctccgtcgtaatttataag-tcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcc 9818573  T
Q  168 ttgaaataag 177  Q
    ||| ||||||    
T  9818572 ttggaataag 9818563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 10720596 - 10720488
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||| |||||||||||        |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  10720596 atactccctccgtcgtaatttataag-tcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcc 10720498  T
Q  168 ttgaaataag 177  Q
    ||| ||||||    
T  10720497 ttggaataag 10720488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 41890187 - 41890269
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||| | |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  41890187 cactaattcaaacttattaagaaaactaacatttaatgatttggggtataattttttgtgttctccttgaaataagtttcatg 41890269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 41889373 - 41889259
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||||||||| |||||||||||||       || ||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  41889373 tactccctccgttctaatttataagcaaaaaa-cattaattcacacttattaagaaaactaacacttagtgatttgatgtataattttttgtattctcct 41889275  T
Q  169 tgaaataagattcatg 184  Q
    ||||||||| ||||||    
T  41889274 tgaaataagtttcatg 41889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 7989255 - 7989326
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  7989255 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 7989326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 44600615 - 44600536
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattca 182  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||  |||||| ||||    
T  44600615 actaattcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctccttagaataagtttca 44600536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 30082387 - 30082282
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||           |||| ||||||||||| |||||||||||||    
T  30082387 gagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttttttga-----------aataacataaaaattggtcttttttgctta 30082299  T
Q  338 tattttgagacaaagaa 354  Q
    ||||||| |||||||||    
T  30082298 tattttgggacaaagaa 30082282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 32491051 - 32491133
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||||  |||||| ||||||    
T  32491051 cactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttctccttataataagtttcatg 32491133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 47383609 - 47383494
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       ||| ||||||||  ||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  47383609 atactccctccgtcctaatttataagcaaaaaa-cacaaattcacacatattaagaaaactaacacttaatgatttgagatataattttttgtgttctcc 47383511  T
Q  168 ttgaaataagattcatg 184  Q
    || ||||||| ||||||    
T  47383510 ttaaaataagtttcatg 47383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 18206398 - 18206467
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    |||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18206398 ggagaacaaattaaatacaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataa 18206467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 41815640 - 41815712
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  41815640 taattgacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataag 41815712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 21654031 - 21654147
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||||| |||||||||||||       |||||||||||| |||||||||||||||| | ||||||| ||||| ||| | |||||||||||||    
T  21654031 tatactccctccgttctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaatacttagtgacttgagatatcattttttgtgttctc 21654129  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  21654130 cttggaataagtttcatg 21654147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 40560585 - 40560477
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       || ||||| ||| ||||||| |||||||||| ||| | ||||||||||||| ||||||||||||||    
T  40560585 atactccctccgtcctaatttataagcaaaaaa-cattaatttacacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctcc 40560487  T
Q  168 ttgaaataag 177  Q
    ||||||||||    
T  40560486 ttgaaataag 40560477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 19964151 - 19964220
Alignment:
Q  115 ttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||| ||||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatg 19964220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 35084180 - 35084253
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataat 310  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| |||||||| | |||| ||||||||||||    
T  35084180 ggagaacaaattcaatgcaatttgcatttaattttactttggaaaggatgatttttatgaagaaacataataat 35084253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 23731730 - 23731648
Alignment:
Q  104 ctaattcacatttattaagaaaacta--acatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||||||||||||||||||  ||| |||||||||||| |||| | ||||||||||||||||| |||||| ||||||    
T  23731730 ctaattcacatttattaagaaaactataacacttagtgatttgatgtatgattttttgtgttctccttggaataagtttcatg 23731648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 48879558 - 48879483
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    |||||||| ||| |||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||    
T  48879558 cactaatttacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataag 48879483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 33153074 - 33153013
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaa 298  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||    
T  33153074 ggagaacaaattgaatgcaatttgcatttaattttactttgaaaaagataatttttttgaaa 33153013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 45599072 - 45598992
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataa-ctttttgtgttctccttgaaataagattcatg 184  Q
    |||||| || |||||||||||||||||| |||||||||||||||||||  ||||||| || ||||||||||||| ||||||    
T  45599072 taattcgcacttattaagaaaactaacacttagtgatttgaggtataatttttttgtattttccttgaaataagtttcatg 45598992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 28608407 - 28608338
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatt-tgtttgaaaaaacataa 306  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||| | ||||||| |||||||    
T  28608407 gagaacaaattgaatgcaatttgcatttaattttactttggaaaatgtgattctttttgaaataacataa 28608338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 34808384 - 34808307
Alignment:
Q  107 attcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||| ||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||| || ||| ||||||    
T  34808384 attcacacttagtaagaaaactaatacttagtgatttgaggtataattttttgtgttcttcttggaaaaagtttcatg 34808307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 36576585 - 36576506
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||  |||||| ||||||    
T  36576585 actaattcacacttat-aagaaaactaacacttagtgatttgaggtataattttttgt-ttctccttagaataagtttcatg 36576506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 360
Target Start/End: Complemental strand, 39170568 - 39170451
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||||||||||||||| | || |||||||| |||| |||| || ||||||||  ||||  |||||| ||||| ||||||| |||||     
T  39170568 caaattgaatgcactttgcatttaatttt-cttttgaaaagataattt-tttgtaacaacataattaaatataataaaagttgatattttttgtttataa 39170471  T
Q  341 tttgagacaaagaatataaa 360  Q
    |||||||||||||| |||||    
T  39170470 tttgagacaaagaaaataaa 39170451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 18800859 - 18800922
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||  |||||| |||||||    
T  18800859 caaattgaatgcaatttacatttaattttactttgaaaaagatgattttcttgaaataacataa 18800922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 183
Target Start/End: Original strand, 35084010 - 35084126
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||||||| |||||||||||       ||| |||||||| ||| |||||||||||| |   ||| ||||||| ||||  ||||||||||||     
T  35084010 tatactccctccgtcccaatttataagcaaaaaaacacaaattcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttctt 35084109  T
Q  167 cttgaaataagattcat 183  Q
    ||||||||||| |||||    
T  35084110 cttgaaataagtttcat 35084126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 7989425 - 7989483
Alignment:
Q  293 ttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaa 351  Q
    ||||||||||||||||||| ||||||| ||| |||||||| |||||||||||| |||||    
T  7989425 ttgaaaaaacataataataacataaaagttggtcttttttacttatattttgaaacaaa 7989483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 31769083 - 31769151
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| || | ||||||||||||||||    
T  31769083 gagagcaaattgaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataat 31769151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 35888090 - 35888158
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||||||||| ||||| | ||||||||||| |||| ||||||||||||||||    
T  35888090 gagagcaaattgaatgcactttgcattttattttcctttggaaaagataattt-tttgaaaaaacataat 35888158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 2633326 - 2633396
Alignment:
Q  106 aattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    ||||||||||||||||||||||||| |  || | |||| ||||| ||||||| ||||||||||| ||||||    
T  2633326 aattcacatttattaagaaaactaaaacataataattttaggtaaaacttttggtgttctccttaaaataa 2633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 29236153 - 29236215
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    ||||||||||||||||  |||||||||||| | | |||||||||||| ||||||| |||||||    
T  29236153 aaattgaatgcaatttatatttaattttacttcgtaaaagatgatttttttgaaataacataa 29236215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 7989391 - 7989432
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaa 282  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  7989391 aacaaattgaatgcaacttgcatttaattttacattgaaaaa 7989432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 22369255 - 22369148
Alignment:
Q  248 tgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttga 345  Q
    ||||||||| |||||||||||||  | || ||||||||||||| ||||||||||||||||  ||||  |||||| ||  | |||||| |||||| |||||    
T  22369255 tgaatgcaaattgcatttaatttctcctttgaaaagatgattt-tttgaaaaaacataattaaatatgataaaagttagtttttttttcttataatttga 22369157  T
Q  346 gacaaagaa 354  Q
     ||||||||    
T  22369156 tacaaagaa 22369148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 47778755 - 47778675
Alignment:
Q  274 attggaaaagatgatttgtttgaaaa-aacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||||||||||| ||| |||| || || | ||||| |||||||||  |||||||||||||||||||| |||||||||    
T  47778755 attggaaaagatgatttttttaaaaacaagatta-aatagaataaaaatttgtcttttttgcttatattttgggacaaagaa 47778675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 28941277 - 28941320
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatg 286  Q
    |||||| ||||||||||||||||||||| || ||||||||||||    
T  28941277 caaatttaatgcaatttgcatttaatttcactttggaaaagatg 28941320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 48937838 - 48937908
Alignment:
Q  106 aattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    |||||| | |||||||||||||  ||| |||||| || ||||||||| ||||||||||||||||| ||||||    
T  48937838 aattcatacttattaagaaaacatacacttagtggtt-gaggtataattttttgtgttctccttggaataag 48937908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 6882439 - 6882378
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 300  Q
    ||||||||||| |||||||||| ||||||||||| | ||| |||| ||||||| |||||||||    
T  6882439 gagaacaaattaaatgcaattttcatttaatttttctttgaaaaatatgattt-tttgaaaaa 6882378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 37767139 - 37767187
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat 285  Q
    |||||||||||| ||||||||||||| ||||||| |  |||||||||||    
T  37767139 ggagaacaaattaaatgcaatttgcacttaatttcattttggaaaagat 37767187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 38260355 - 38260237
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaa-ttgatcttttttgc 334  Q
    |||| |||||| |||||| |||||||||||||||   ||||||||||| |||| ||||||| || |||||  |||| |||||||| ||  | |||||| |    
T  38260355 gagagcaaattaaatgcactttgcatttaattttcatttggaaaagataattt-tttgaaacaatataattaaatatcataaaaagtttgtattttttac 38260257  T
Q  335 ttatattttgagacaaagaa 354  Q
    ||||| |||| |||||||||    
T  38260256 ttataatttgggacaaagaa 38260237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 35260096 - 35259976
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  35260096 ggagaacaaattgaatggaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctt 35259997  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  35259996 atattttgagacaaagaatat 35259976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 27621169 - 27621049
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  27621169 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagtttgtcttttttgctt 27621070  T
Q  337 atattttgagacaaagaatat 357  Q
    |||| ||||||||||||||||    
T  27621069 atatattgagacaaagaatat 27621049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 24612602 - 24612719
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  24612602 ggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctt 24612701  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  24612702 atattttgagacaaagaa 24612719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 37598109 - 37597989
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| ||| ||||||||||||    
T  37598109 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataacaacataaaagttggtcttttttgctt 37598010  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  37598009 atattttgagacaaagaatat 37597989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 11044096 - 11043979
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  11044096 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacataataatagcataaaagttggtcttttttgctt 11043997  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  11043996 atattttgagacaaagaa 11043979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 237 - 359
Target Start/End: Original strand, 25321708 - 25321830
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  25321708 ggagagcaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgctt 25321807  T
Q  337 atattttgagacaaagaatataa 359  Q
    |||||||||||||||||| ||||    
T  25321808 atattttgagacaaagaaaataa 25321830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 27752625 - 27752508
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||    
T  27752625 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgttt 27752526  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  27752525 atattttgagacaaagaa 27752508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 241 - 354
Target Start/End: Original strand, 33851149 - 33851262
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatat 340  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  33851149 aacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgatcttttttgcttatat 33851248  T
Q  341 tttgagacaaagaa 354  Q
    |||||| |||||||    
T  33851249 tttgaggcaaagaa 33851262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 35344406 - 35344285
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaaga-tgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    |||||| | |||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35344406 ggagaatacattgaatgcaatttgcatttaattttacattgaaaaaaaatgatttgtttgaaaaaacataataatagcataaaaattggtcttttttgct 35344307  T
Q  336 tatattttgagacaaagaatat 357  Q
    ||||||||||||||||||||||    
T  35344306 tatattttgagacaaagaatat 35344285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 35346426 - 35346546
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  35346426 ggagaatacattgaatgcaatttgcattcaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttgatcttttttattt 35346525  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  35346526 atattttgagacaaagaatat 35346546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 3099992 - 3099874
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa-aaaacataataatagcataaaa-attgatcttttttgc 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  3099992 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcataaaagattg-tcttttttgc 3099894  T
Q  335 ttatattttgagacaaagaa 354  Q
    ||||||||||| ||||||||    
T  3099893 ttatattttgaaacaaagaa 3099874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 237 - 340
Target Start/End: Original strand, 44358613 - 44358716
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  44358613 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacgtaataataacataaaagttgatcttttttgctt 44358712  T
Q  337 atat 340  Q
    ||||    
T  44358713 atat 44358716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 44052660 - 44052542
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa-aaaacataataatagcataaaaattgatcttttttgct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| | |||||||||    
T  44052660 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacataaaagttggttttttttgct 44052561  T
Q  336 tatattttgagacaaagaa 354  Q
    |||||||||||| ||||||    
T  44052560 tatattttgagataaagaa 44052542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 239 - 397
Target Start/End: Original strand, 32678633 - 32678790
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  32678633 agaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagtttatcttttttgcttat 32678732  T
Q  339 attttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagtact 397  Q
    ||||| | |||||||| || | |        ||||||||||||||||||||||||||||    
T  32678733 attttaaaacaaagaaaatgata-tttttttgcttatattttaagacggagggagtact 32678790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 36538097 - 36537980
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||    
T  36538097 ggagaataaattaaatgcaaattgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtttgtcttttttgctt 36537998  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  36537997 atattttgagacaaagaa 36537980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 237 - 349
Target Start/End: Complemental strand, 39187272 - 39187159
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaa-attgatcttttttgct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||| | |||||||||    
T  39187272 ggagaacaaattgaatgcaatttgcatttaattttacattggaaatgatgatttgtttgaaaaaacataataatagcataaaagtttgtttttttttgct 39187173  T
Q  336 tatattttgagaca 349  Q
    ||||||||||||||    
T  39187172 tatattttgagaca 39187159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 44411331 - 44411452
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatc-ttttttgct 335  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||    
T  44411331 ggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcataaaagttggtctttttttgct 44411430  T
Q  336 tatattttgagacaaagaatat 357  Q
    |||||||||||| |||||||||    
T  44411431 tatattttgagaaaaagaatat 44411452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 240 - 395
Target Start/End: Complemental strand, 11992764 - 11992609
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa-aaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | | | ||||||||||||    
T  11992764 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcataaaagtaggttttttttgcttat 11992665  T
Q  339 attttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||||| | ||||||||||| |||        |||||||||||| |||||||||||||    
T  11992664 attttaatacaaagaatatgaaa-tttttttgcttatattttaggacggagggagta 11992609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 332
Target Start/End: Original strand, 37567557 - 37567648
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatctttttt 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||    
T  37567557 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtctgaaaaaacataataatagcataaaagttggtatttttt 37567648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 35344575 - 35344459
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||||| |||||||||||||||||       | |||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35344575 atactccctacgtcctaatttataagcaaaaaaactctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 35344476  T
Q  168 ttgaaataagattcatg 184  Q
    |||||||||| ||||||    
T  35344475 ttgaaataagtttcatg 35344459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 35260265 - 35260149
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  35260265 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctc 35260167  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  35260166 cttggaataagtttcatg 35260149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 37598277 - 37598161
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||  |||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  37598277 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacggttattaagaaaactaacacttactgatttgaggtataattttttgtgttctc 37598179  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  37598178 cttgaaataagtttcatg 37598161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 11044263 - 11044149
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||||||||| |||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  11044263 tactccctccgttctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 11044165  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  11044164 tggaataagtttcatg 11044149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 12108204 - 12108088
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaatt-gatcttttttgcttata 339  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||| |||||||| || | | |||||||||||||    
T  12108204 aacaaattgaatgcaatttgcattgaattttacatt-gaaaaaatgatttgtttgaaaaaatataataatggcataaaagttggtttttttttgcttata 12108106  T
Q  340 ttttgagacaaagaatat 357  Q
    |||||||| ||| |||||    
T  12108105 ttttgagataaaaaatat 12108088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 27752792 - 27752678
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||| ||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  27752792 tactccctccgtcctgatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 27752694  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  27752693 tggaataagtttcatg 27752678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 31133151 - 31133219
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 305  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133151 ggagaaaaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 11992935 - 11992820
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||||||||||||||||||||||        |||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11992935 atactccctccgtcctaatttataag-taaaaaacactaattcacactaattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 11992837  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  11992836 ttggaataagtttcatg 11992820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 31132986 - 31133090
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  31132986 tactccctccgtcctaatttataagcaaaaa---actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 31133082  T
Q  169 tgaaataa 176  Q
    || |||||    
T  31133083 tggaataa 31133090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 44411163 - 44411278
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||| |||||||||||||||||||       |||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||    
T  44411163 atactccttccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcc 44411261  T
Q  168 ttgaaataagattcatg 184  Q
    |||||||||| ||||||    
T  44411262 ttgaaataagtttcatg 44411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 27621336 - 27621222
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||| ||    
T  27621336 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctact 27621238  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  27621237 tggaataagtttcatg 27621222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 25321539 - 25321648
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||| |||||||||    
T  25321539 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacacttatttagaaaactaacatttggtgatttgaggtataattttctgtgttctc 25321637  T
Q  167 cttgaaataag 177  Q
    |||| ||||||    
T  25321638 cttggaataag 25321648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 35346293 - 35346365
Alignment:
Q  104 ctaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  35346293 ctaattcacatttattaagaaaattaatatttagtgatttgaggtataattttttgtgttctccttgaaataa 35346365  T

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Target: chr8; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 3100159 - 3100045
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||| ||||||||||||       |||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |    
T  3100159 tactccctccgtcttaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgt 3100061  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  3100060 tggaataagtttcatg 3100045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 34713567 - 34713511
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtt 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34713567 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtt 34713511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 40487794 - 40487868
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaa 319  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  40487794 aaattgaatgcaacttgcattgaattttacattggaaaagatgatttgtttg-aaaaacataataatagcaaaaaa 40487868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 24612467 - 24612549
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||| |||||| ||||||    
T  24612467 cactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctccttggaataagtttcatg 24612549  T

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Target: chr8; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 34713701 - 34713627
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| | |||||||||||    
T  34713701 actaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtttttcttgaaataag 34713627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 36538232 - 36538150
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||  |||||| ||||||    
T  36538232 cactaattcacatttattaagaaaactaacatttagtgatttgaggaataattttttatgttctctttagaataagtttcatg 36538150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 44052794 - 44052720
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||    
T  44052794 actaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttggaataag 44052720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 2238715 - 2238781
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaca 303  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  2238715 ggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatgatttttttgaaataaca 2238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 12108326 - 12108247
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||| || |||||||||||||||||||||||| |||||| |||||| |||||||||| || |||||||||| ||||||    
T  12108326 taattctcacttattaagaaaactaacatttagtaatttgaagtataattttttgtgttatctttgaaataagtttcatg 12108247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 354
Target Start/End: Complemental strand, 16635610 - 16635497
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa-aaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    ||||| ||||||| |||||| ||| |||||||| || ||||||||||||| |||||| |||||||| ||||||||||||| ||| ||||| || ||||||    
T  16635610 aacaacttgaatgaaatttgaattaaattttacttttgaaaagatgattt-tttgaagaaaacatagtaatagcataaaagttggtctttcttacttata 16635512  T
Q  340 ttttgagacaaagaa 354  Q
    ||||  |||||||||    
T  16635511 ttttaggacaaagaa 16635497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 31133765 - 31133826
Alignment:
Q  296 aaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaatat 357  Q
    ||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  31133765 aaaaaacataacaatagcataaaagttggtctttttttcttatattttgagacaaagaatat 31133826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 8673418 - 8673302
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    |||| ||||||||||| | ||||||||||||||| | ||||||||||| |||| ||| |||| ||  || ||||  |||||| ||| |||||||||||||    
T  8673418 gagagcaaattgaatgtactttgcatttaattttcctttggaaaagataatttttttaaaaacactaaaaaatatgataaaagttggtcttttttgctta 8673319  T
Q  338 tattttgagacaaagaa 354  Q
    || |||| |||||||||    
T  8673318 taatttgggacaaagaa 8673302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 39187436 - 39187332
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||| ||||||||||||       |||||||||||  |||||||||||||||||| |||||||||||||||||||   ||||||||||| |    
T  39187436 tactccctccgtcataatttataagcaaaaaa-cactaattcacgcttattaagaaaactaacacttagtgatttgaggtataa---tttgtgttctcgt 39187341  T
Q  169 tgaaataag 177  Q
    || ||||||    
T  39187340 tggaataag 39187332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 24510819 - 24510886
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    ||||||||||||||||||||||||||||||  ||| |||||||| ||||||| ||||||| |||||||    
T  24510819 agaacaaattgaatgcaatttgcatttaatactactttggaaaaaatgatttttttgaaataacataa 24510886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 354
Target Start/End: Complemental strand, 16635478 - 16635361
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-----aaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    ||||| |||||||||||||| ||| |||||||| || ||||||||||||| ||||     |||||||||| ||||||||||||| ||| ||||| || ||    
T  16635478 aacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt-tttgaagaaaaaaaacatagtaatagcataaaagttggtctttcttact 16635380  T
Q  336 tatattttgagacaaagaa 354  Q
    ||||||||  |||||||||    
T  16635379 tatattttaggacaaagaa 16635361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 16635871 - 16635786
Alignment:
Q  247 ttgaatgcaatttgcatttaatttt-acattggaaaagatgatttgtttgaaa--aaacataataatagcataaaaattgatcttt 329  Q
    ||||||| ||||||||||||||||| || || ||||||||||||| |||||||  ||||||| ||||||||||||||||| |||||    
T  16635871 ttgaatgaaatttgcatttaatttttacttttgaaaagatgatttttttgaaagaaaacatagtaatagcataaaaattggtcttt 16635786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 16643284 - 16643195
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgttt-gaaaaaacataataatagcataaaaattgatcttt 329  Q
    ||||| ||||||  ||||||||||| ||||||| || |||||||||||||||||  ||||||||||||||||  |||||| |||||||||    
T  16643284 aacaacttgaatataatttgcattttattttacttttgaaaagatgatttgtttaaaaaaaacataataataagataaaagttgatcttt 16643195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 41426374 - 41426325
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgattt 290  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  41426374 aacaaattgaatgcaatttgcatttaattttactttgaaaaagatgattt 41426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 17314868 - 17314750
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgc 334  Q
    ||||| ||||||||||||| |||| ||||||||||   || |||||||| | || ||||||||||||||||  ||||  |||||| ||||||||||||||    
T  17314868 ggagagcaaattgaatgcactttggatttaattttcttttagaaaagataagtt-tttgaaaaaacataattaaatatgataaaagttgatcttttttgc 17314770  T
Q  335 ttatattttgagacaaagaa 354  Q
    ||||| ||||  ||||||||    
T  17314769 ttataatttggaacaaagaa 17314750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 32678471 - 32678544
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgat 141  Q
    |||||||||||||||||||||||||||       || ||||||||| |||||||||||||||||| ||||||||    
T  32678471 atactccctccgtcctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgat 32678544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 16635746 - 16635640
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-----aaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    ||||| |||||||||||||| ||| |||||||| || ||||||||||||| ||||     |||||||||| ||||||||||||| ||| ||||| || ||    
T  16635746 aacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt-tttgaagataaaaaacatagtaatagcataaaagttggtctttcttact 16635648  T
Q  336 tatatttt 343  Q
    ||||||||    
T  16635647 tatatttt 16635640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 354
Target Start/End: Complemental strand, 17713252 - 17713143
Alignment:
Q  246 attgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatatttt 343  Q
    |||||||||| ||||||||||||||| | ||||||||||| ||||| |||||| || |||||  ||||  |||||| ||| |||||||| |||||| |||    
T  17713252 attgaatgcactttgcatttaattttcctttggaaaagataatttg-ttgaaacaatataattaaatatgataaaagttggtcttttttacttataattt 17713154  T
Q  344 gagacaaagaa 354  Q
    | |||||||||    
T  17713153 gggacaaagaa 17713143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 34899959 - 34899894
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    ||||||||||||| |||| |||||||||||||| || ||||||||||||| ||||||| ||||||||    
T  34899959 aacaaattgaatgaaattagcatttaattttactttagaaaagatgattt-tttgaaataacataat 34899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 5217419 - 5217312
Alignment:
Q  248 tgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttga 345  Q
    ||||||||| |||||||||||||  | |||| ||||||||| | ||||||||||||||||  ||||  |||||| ||| ||||||||||||||| ||||     
T  5217419 tgaatgcaaattgcatttaatttctccttgggaaagatgatgt-tttgaaaaaacataattaaatatgataaaagttggtcttttttgcttataatttgg 5217321  T
Q  346 gacaaagaa 354  Q
     ||||||||    
T  5217320 tacaaagaa 5217312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 25195169 - 25195237
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| | || ||||||||||||||||    
T  25195169 gagagcaaattgaatgcactttgcatttaatttttctttggaaaagataagtt-tttgaaaaaacataat 25195237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 17336780 - 17336713
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 305  Q
    ||||| ||||||||||||| ||||||||||||||| | || |||||||| |||| ||||||||||||||    
T  17336780 ggagagcaaattgaatgcactttgcatttaattttcctttagaaaagataattt-tttgaaaaaacata 17336713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 41362435 - 41362498
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||| |||||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||||    
T  41362435 caaattaaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataat 41362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 28497641 - 28497750
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| | ||||||||||||| | ||||||||||| |||| ||||||| ||||||||  ||||  |||||| ||| | | |||||||||||     
T  28497641 caaattgaatgcactatgcatttaattttcctttggaaaagataattt-tttgaaataacataattaaatatgataaaagttggtatattttgcttataa 28497739  T
Q  341 tttgagacaaa 351  Q
    |||| ||||||    
T  28497740 tttgggacaaa 28497750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 26954520 - 26954632
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata--ataatagcataaaaattgatcttttttgcttatat 340  Q
    |||| |||||||| |||||||||||||||   ||||||||||| |||| ||||||| ||||||  | ||||  |||||| ||| |||||||| ||||||     
T  26954520 caaaatgaatgcactttgcatttaattttcttttggaaaagataattt-tttgaaacaacatagtaaaatatgataaaatttggtcttttttacttataa 26954618  T
Q  341 tttgagacaaagaa 354  Q
    |||| |||||||||    
T  26954619 tttgggacaaagaa 26954632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 27819697 - 27819585
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgc 334  Q
    ||||| |||||| |||| | ||||||||||||||| | ||| |||||||||||| ||||||| |||| |||  ||||  |||||| || |||||||||||    
T  27819697 ggagagcaaattaaatgtagtttgcatttaattttcctttgaaaaagatgattt-tttgaaataacaaaattaaatatgataaaagtttatcttttttgc 27819599  T
Q  335 ttatattttgagac 348  Q
    ||||| ||| ||||    
T  27819598 ttataatttaagac 27819585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 37567450 - 37567500
Alignment:
Q  134 ttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||| ||||||    
T  37567450 ttagtgatttgaggtataattttttgtgttctctttggaataagtttcatg 37567500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 41791583 - 41791651
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||| |||||||||||   |||||||||||||||| |||||||||| |||||    
T  41791583 gagagcaaattgaatgcattttacatttaattttcttttggaaaagatgattt-tttgaaaaaagataat 41791651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 30576040 - 30576091
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaatataa 359  Q
    ||||| |||||||||  |||||||||||||||||||| ||||||||| ||||    
T  30576040 aataggataaaaatttgtcttttttgcttatattttgggacaaagaaaataa 30576091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 13144174 - 13144220
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||| |||||| ||  ||||||||||||||||||||||||||||||    
T  13144174 aataggataaaagtttgtcttttttgcttatattttgagacaaagaa 13144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 13143705 - 13143665
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||| || ||||||||||||||||||||| |||||||||    
T  13143705 ataaaagtttatcttttttgcttatattttgggacaaagaa 13143665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 3043254 - 3043374
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3043254 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgatctttttcgctt 3043353  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  3043354 atattttgagacaaagaatat 3043374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 39970076 - 39970196
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  39970076 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttggttgaaaaaacataataatagcataaaaattagtcttttttgctt 39970175  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  39970176 atattttgagacaaagaatat 39970196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 52713096 - 52712976
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  52713096 ggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattggtcttttttactt 52712997  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  52712996 atattttgagacaaagaatat 52712976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 53677566 - 53677686
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  53677566 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggttttttttgctt 53677665  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  53677666 atattttgagacaaagaatat 53677686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 9798162 - 9798282
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9798162 ggagaacacattgaatccaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgatcttttttgctt 9798261  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||| ||| |||||||||    
T  9798262 atattttaagataaagaatat 9798282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 239 - 354
Target Start/End: Complemental strand, 38940900 - 38940785
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  38940900 agaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtattttttgcttat 38940801  T
Q  339 attttgagacaaagaa 354  Q
    ||||||||||||||||    
T  38940800 attttgagacaaagaa 38940785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 32012414 - 32012531
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  32012414 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagtttgtcttttttgctt 32012513  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  32012514 atattttgagacaaagaa 32012531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 50768478 - 50768361
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  50768478 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgctt 50768379  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  50768378 atattttgagacaaagaa 50768361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 10591590 - 10591709
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||    
T  10591590 ggagaaccaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattagtctttttt-ctt 10591688  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||||||||||| |||||    
T  10591689 atattttgagacaaaaaatat 10591709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 29180499 - 29180619
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||  ||||||||||||    
T  29180499 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacataaaagtttgtcttttttgctt 29180598  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  29180599 atattttgagacaaagaatat 29180619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 30776571 - 30776691
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  30776571 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacataaaagttggtcttttttgctt 30776670  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||||||||||| |||||    
T  30776671 atattttgagacaaataatat 30776691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 30777520 - 30777400
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  30777520 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacataaaagttggtcttttttgctt 30777421  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||||||||||| |||||    
T  30777420 atattttgagacaaataatat 30777400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 49902060 - 49901939
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaa-attgatcttttttgct 335  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||  ||| | |||||||||    
T  49902060 ggagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataataacataaaagtttgtttttttttgct 49901961  T
Q  336 tatattttgagacaaagaatat 357  Q
    ||||||||||||||||||||||    
T  49901960 tatattttgagacaaagaatat 49901939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 38187814 - 38187930
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  38187814 gagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacatactaatagcataaaagttgatcttttttactta 38187913  T
Q  338 tattttgagacaaagaa 354  Q
    |||||||||| ||||||    
T  38187914 tattttgagataaagaa 38187930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 43980531 - 43980411
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||| |||    
T  43980531 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaatataataatagcataaaagttggtattttttactt 43980432  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||| |||||||||||||    
T  43980431 atattttaagacaaagaatat 43980411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 37788483 - 37788367
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| ||||    
T  37788483 gagaacaaattaaatgcaagttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttactta 37788384  T
Q  338 tattttgagacaaagaa 354  Q
    |||||||||| ||||||    
T  37788383 tattttgagataaagaa 37788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 239 - 357
Target Start/End: Complemental strand, 1620060 - 1619942
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| | |||| || ||||    
T  1620060 agaacaaattgaatgcaaattgcatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcataaaagttggtgttttatgattat 1619961  T
Q  339 attttgagacaaagaatat 357  Q
    |||||||||||||||||||    
T  1619960 attttgagacaaagaatat 1619942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 55937790 - 55937907
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||    
T  55937790 ggagaacaaattaaatacaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatatcataaaagttggtcttttttgctt 55937889  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||| ||||||||||    
T  55937890 atattttaagacaaagaa 55937907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 240 - 351
Target Start/End: Complemental strand, 29899745 - 29899634
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  29899745 gaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgcttata 29899646  T
Q  340 ttttgagacaaa 351  Q
    | |||| |||||    
T  29899645 tgttgaaacaaa 29899634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 237 - 343
Target Start/End: Complemental strand, 51495182 - 51495079
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||||||||||| ||||||||||||||||    
T  51495182 ggagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttaaaaaaacat---aatagcataaaagttgatcttttttgctt 51495086  T
Q  337 atatttt 343  Q
    |||||||    
T  51495085 atatttt 51495079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 239 - 354
Target Start/End: Original strand, 27750437 - 27750552
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||| || |||||||    
T  27750437 agaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaataacataaaaatagcataaaagttggtctgttatgcttat 27750536  T
Q  339 attttgagacaaagaa 354  Q
    ||||||||| ||||||    
T  27750537 attttgagataaagaa 27750552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 30777688 - 30777573
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  30777688 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacaattagtgatttgaggtataattttttgtgttctcct 30777589  T
Q  169 tgaaataagattcatg 184  Q
    ||||||||| ||||||    
T  30777588 tgaaataagtttcatg 30777573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 43980700 - 43980584
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||| |||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43980700 tatattccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacatttagtgatttgaggtataaatttttgtgttctc 43980602  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  43980601 cttgaaataagtttcatg 43980584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 239 - 354
Target Start/End: Original strand, 30012041 - 30012157
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg--aaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||   ||||||||||||||||| |||||| ||||||||||||||||    
T  30012041 agaacaaattgaatgcaatttgcatttaattttactttggaaa-gatgattttttttttaaaaaacataataatagaataaaagttgatcttttttgctt 30012139  T
Q  337 atattttgagacaaagaa 354  Q
    |||||||| |||||||||    
T  30012140 atattttgggacaaagaa 30012157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 9797995 - 9798109
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  9797995 tactcccttcgtcctaatttataagcaaaaaa-cactaattcacatttattaagaaaactaacatttagtgatttgaggtataattttttgcgttctcct 9798093  T
Q  169 tgaaataagattcatg 184  Q
    ||||||||| ||||||    
T  9798094 tgaaataagtttcatg 9798109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 10591422 - 10591537
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       || ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10591422 atactccctccgtcctaatttataagcaaaaaa-cagtaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcc 10591520  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  10591521 ttggaataagtttcatg 10591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 29180331 - 29180445
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  29180331 atactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 29180429  T
Q  168 ttgaaataagattcat 183  Q
    ||| |||||| |||||    
T  29180430 ttggaataagtttcat 29180445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 30776403 - 30776518
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  30776403 atactccctccgtcctaatttataagcaaaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 30776501  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  30776502 ttggaataagtttcatg 30776518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 47807228 - 47807157
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataata 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47807228 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacataata 47807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 39969909 - 39970023
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       || ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  39969909 tactccctccgtcctaatttataagcaaaaaa-cagtaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 39970007  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  39970008 tggaataagtttcatg 39970023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 29899915 - 29899808
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||||||||||||||||||||||        |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  29899915 tactccctccgtcctaatttataag-taaaaaacactaattcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctcct 29899817  T
Q  169 tgaaataag 177  Q
    || ||||||    
T  29899816 tggaataag 29899808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 55937655 - 55937737
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  55937655 cactaattcatacttattaagaaaactaacacttagtgatttgaggtataagtttttgtgttctccttgaaataagtttcatg 55937737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 28681860 - 28681760
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||| ||||||||||||||||||||        ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28681860 atactctctccgtcctaatttataagcaaaaaat-actaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcc 28681762  T
Q  168 tt 169  Q
    ||    
T  28681761 tt 28681760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 3043086 - 3043201
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||| |||||||||||||||||||        |||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||| ||||    
T  3043086 atactctctccgtcctaatttataag-taaaaaacactaattcacacttattaagaaaactaacacttagtgagttgaggtataattttttgtgtactcc 3043184  T
Q  168 ttgaaataagattcatg 184  Q
    |||||||||| ||||||    
T  3043185 ttgaaataagtttcatg 3043201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 37788616 - 37788537
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  37788616 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatg 37788537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 5222380 - 5222502
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-----aaaaaacataataatagcataaaaattgatcttttt 331  Q
    |||||||||||| |||||||||||||||||||||||| |||||||| ||||||| |||      ||||||||||||||||| |||||| ||| |||||||    
T  5222380 ggagaacaaattcaatgcaatttgcatttaattttactttggaaaaaatgattttttttttttaaaaaaacataataatagtataaaagttggtcttttt 5222479  T
Q  332 tgcttatattttgagacaaagaa 354  Q
    | ||||||||||  |||||||||    
T  5222480 tacttatattttaggacaaagaa 5222502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 38941037 - 38940956
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcat 183  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| |||||    
T  38941037 cactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcat 38940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 53677434 - 53677512
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcat 183  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| || |||||    
T  53677434 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaatgagtttcat 53677512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 38187646 - 38187736
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataacttttt 158  Q
    ||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  38187646 tatactccctccgtcctaatttataagctaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 38187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 50768645 - 50768531
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||| | ||||||||| ||| ||||| |||||||||| ||||    
T  50768645 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttcct 50768547  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  50768546 tggaataagtttcatg 50768531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 51495350 - 51495235
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||||||||||||||||||        |||||||||||| |||||||||||| ||||| ||| ||||||||||||||| |||||||||||||    
T  51495350 tatactccctccgtcctaatttataag--aaaaaacactaattcacagttattaagaaaattaacacttaatgatttgaggtataattttttgtgttctc 51495253  T
Q  167 cttgaaataagattcatg 184  Q
     ||  |||||| ||||||    
T  51495252 tttataataagtttcatg 51495235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 32012282 - 32012361
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| || |||| ||||||    
T  32012282 taattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaattaagtttcatg 32012361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 47806861 - 47806811
Alignment:
Q  307 taatagcataaaaattgatcttttttgcttatattttgagacaaagaatat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47806861 taatagcataaaaattgatcttttttgcttatattttgagacaaagaatat 47806811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 23978230 - 23978347
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||| ||||||| |||    
T  23978230 gagagcaaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttggtctttttcgct 23978328  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| || ||||||    
T  23978329 tataatttgggataaagaa 23978347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 47807388 - 47807281
Alignment:
Q  75 ctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaat 174  Q
    ||||||||||||||||||||       |||||||||||| |||||||||||| |||   ||||||||||||||||||| ||||||||||||| ||| |||    
T  47807388 ctccgtcctaatttataagcaaaaa--cactaattcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtgttctctttggaat 47807291  T
Q  175 aagattcatg 184  Q
    ||| ||||||    
T  47807290 aagtttcatg 47807281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 49902195 - 49902113
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||| ||||||  ||| |||||| ||||||    
T  49902195 cactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttatgttctagttggaataagtttcatg 49902113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 52713220 - 52713141
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||| |||||||||||||||||| | |||||||||||| |||||| |||||||||| | |||| |||||| ||||||    
T  52713220 taattcatatttattaagaaaactaatacttagtgatttgaagtataattttttgtgtttttcttggaataagtttcatg 52713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 46070641 - 46070753
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatc-ttttttgcttatat 340  Q
    |||||||||||| ||||||||||||||| | ||||||||||| |||| ||| ||| ||||||||  ||||  |||||||||| || |||||||||||||     
T  46070641 aaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttcaaacaacataattaaatatgataaaaattggtctttttttgcttataa 46070739  T
Q  341 tttgagacaaagaa 354  Q
    |||| |||||||||    
T  46070740 tttgggacaaagaa 46070753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 5222249 - 5222326
Alignment:
Q  106 aattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcat 183  Q
    |||||||| |||||||||||||||| |  |||| ||||||| ||||| |||||||||||| ||||||||||| |||||    
T  5222249 aattcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttcttcttgaaataagtttcat 5222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 5234089 - 5234171
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatga-tttgtttgaaaaaacataataatagcataaaa 319  Q
    |||||| |||||||||||||||| ||||||||||||  ||  ||||||| | ||| ||||||||||||||||||||||||||||    
T  5234089 ggagaataaattgaatgcaatttacatttaatttta-ttttaaaaagataattttttttgaaaaaacataataatagcataaaa 5234171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 8013204 - 8013321
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    ||||||| | ||||||||| ||||||||||||||   ||||||||||| |||| |||||||||| |||||  ||||  |||||| ||| |||||||| ||    
T  8013204 gagaacataatgaatgcaaattgcatttaatttttacttggaaaagataattt-tttgaaaaaatataattaaatatgataaaagttggtcttttttact 8013302  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| |||||||||    
T  8013303 tataatttgggacaaagaa 8013321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 37911921 - 37911804
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| |||||| |||||| ||||||||||||||| | ||||||||||| || | ||||||||||||||||  ||||  |||||| ||  |||||||| ||    
T  37911921 gagagcaaattcaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaatatgataaaatttagtcttttttact 37911823  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| |||||||||    
T  37911822 tataatttgggacaaagaa 37911804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 38140826 - 38140896
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||||||| | |||||||||| |||||||||| |  |||||||||||||||| ||||||| ||||||||    
T  38140826 ggagaacaaactaaatgcaattttcatttaatttcattttggaaaagatgatttttttgaaataacataat 38140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 343
Target Start/End: Original strand, 17236342 - 17236446
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatga--tttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    ||||||||||||||||||||||||||||||||  || ||||| ||||  ||| ||| || ||  ||||||||| ||||||||||  ||| |||| |||||    
T  17236342 aacaaattgaatgcaatttgcatttaattttattttagaaaaaatgatttttttttaaataagaataataataacataaaaatttgtctattttacttat 17236441  T
Q  339 atttt 343  Q
    |||||    
T  17236442 atttt 17236446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 28318538 - 28318649
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatatt 341  Q
    |||||||||||| ||| ||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||  | ||||||||||| | |    
T  28318538 aaattgaatgcattttacatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttagttttttttgcttacaat 28318636  T
Q  342 ttgagacaaagaa 354  Q
    ||| |||||||||    
T  28318637 ttgggacaaagaa 28318649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 359
Target Start/End: Complemental strand, 49080294 - 49080170
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaa-gatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgc 334  Q
    |||| ||||||||||||| ||||||||||||||| | ||| ||||  |  |||| ||| ||||||||||||  ||||  |||||| ||||||||||||||    
T  49080294 gagatcaaattgaatgcactttgcatttaattttcctttgaaaaataacaatttttttaaaaaaacataattaaatatgataaaagttgatcttttttgc 49080195  T
Q  335 ttatattttgagacaaagaatataa 359  Q
    ||||| |||| |||| |||| ||||    
T  49080194 ttataatttgggacagagaaaataa 49080170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 1620231 - 1620115
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||| || ||||||||||| |       |||||||||||| |||||||| ||  ||| | ||||||||||||| ||| | ||||||||||||||    
T  1620231 atactccctcggttctaatttataaacaaaaaaacactaattcacacttattaaggaagttaatacttagtgatttgagatatcattttttgtgttctcc 1620132  T
Q  168 ttgaaataagattcatg 184  Q
    ||  |||||| ||||||    
T  1620131 ttagaataagtttcatg 1620115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 17799248 - 17799299
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgat 288  Q
    |||||||||||| ||||||||||||||||| ||| || ||||||||||||||    
T  17799248 ggagaacaaattaaatgcaatttgcatttagtttcactttggaaaagatgat 17799299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 354
Target Start/End: Original strand, 47516318 - 47516423
Alignment:
Q  250 aatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttgaga 347  Q
    |||||| |||| |||||||||| | ||||||||||| |||| ||||||| ||||||||  |||   |||||| ||| ||||||||||||||| |||| ||    
T  47516318 aatgcactttgtatttaattttcctttggaaaagataattt-tttgaaacaacataattaaatgtaataaaagttggtcttttttgcttataatttggga 47516416  T
Q  348 caaagaa 354  Q
    |||||||    
T  47516417 caaagaa 47516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 53848499 - 53848387
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| |||||||||| |||| | ||| |||||||||||| ||||||| || |||||  |||   |||||| ||| |||||||| ||||||     
T  53848499 caaattgaatgcactttgcatttattttttctttgaaaaagatgattt-tttgaaacaatataattaaatttgataaaagttggtcttttttacttataa 53848401  T
Q  341 tttgagacaaagaa 354  Q
    |||| |||||||||    
T  53848400 tttgggacaaagaa 53848387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 28142755 - 28142854
Alignment:
Q  257 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattga-tcttttttgcttatattttgagacaaaga 353  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| |||| | ||||||||||||| ||||  |||||||    
T  28142755 tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttgatttttttttgcttataatttggaacaaaga 28142853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 26916297 - 26916257
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  26916297 ataaaagtttatcttttttgcttatattttgagacaaagaa 26916257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 27750313 - 27750361
Alignment:
Q  115 ttattaagaaaactaacatttagtgatttgaggtataactttttgtgtt 163  Q
    |||||||||||| ||||||||||||||||||| ||| | ||||||||||    
T  27750313 ttattaagaaaattaacatttagtgatttgagatatgattttttgtgtt 27750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 8178354 - 8178470
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| |||||||||||||||   || ||||| || |||| ||||||| || |||||  ||||  |||||| ||| |||||||| ||    
T  8178354 gagagcaaattgaatgcactttgcatttaattttcttttagaaaatataattt-tttgaaacaatataattaaatatgataaaagttggtctttttt-ct 8178451  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| ||||||||||||||    
T  8178452 tataatttgagacaaagaa 8178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 17236262 - 17236329
Alignment:
Q  116 tattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcat 183  Q
    ||||||||||||||| |  || |  |||||||||||| |||||||||||| ||||||||||| |||||    
T  17236262 tattaagaaaactaaaacataatagtttgaggtataattttttgtgttcttcttgaaataagtttcat 17236329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 40553796 - 40553738
Alignment:
Q  248 tgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||||||||||||||||||||  | |||||||||||||||| ||| ||| ||||||||    
T  40553796 tgaatgcaatttgcatttaatttctctttggaaaagatgattt-ttttaaataacataat 40553738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 16605040 - 16605086
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||| ||  |||||||||||||||||||| |||||||||    
T  16605040 aatagcataaaagtttgtcttttttgcttatattttgggacaaagaa 16605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 32410365 - 32410252
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| |||||||||| || ||||||||||||||| | ||||||||  | || | |||||||||| |||||  ||||  |||||| |||||| |||||||     
T  32410365 gagagcaaattgaatacactttgcatttaattttcctttggaaaaagtaatat-tttgaaaaaatataattaaatacgataaaagttgatc-tttttgca 32410268  T
Q  336 tatattttgagacaaa 351  Q
    |||| |||||||||||    
T  32410267 tataatttgagacaaa 32410252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 359
Target Start/End: Complemental strand, 40411138 - 40411016
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||| ||||||||||||| ||  ||||||| |||| ||| ||||||| ||||  ||||  |||||| ||| | ||||||| |    
T  40411138 gagatcaaattgaatgcagtttacatttaattttactttaaaaaagat-atttttttaaaaaaacttaattaaatatgataaaagttggttttttttgtt 40411040  T
Q  336 tatattttgagacaaagaatataa 359  Q
    |||| ||||  |||||||| ||||    
T  40411039 tataatttggaacaaagaaaataa 40411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 237 - 360
Target Start/End: Complemental strand, 28424310 - 28424187
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  28424310 ggagaacaaattgaatacaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctt 28424211  T
Q  337 atattttgagacaaagaatataaa 360  Q
    | ||||||||||||||||||||||    
T  28424210 aaattttgagacaaagaatataaa 28424187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 237 - 359
Target Start/End: Original strand, 4033795 - 4033917
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4033795 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 4033894  T
Q  337 atattttgagacaaagaatataa 359  Q
    |||||||||||||||||| ||||    
T  4033895 atattttgagacaaagaaaataa 4033917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 792476 - 792596
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  792476 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacataataataacataaaagttggtcttttttgctt 792575  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  792576 atattttgagacaaagaatat 792596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 38549764 - 38549880
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  38549764 gagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaagttgatcttttttgctta 38549863  T
Q  338 tattttgagacaaagaa 354  Q
    |||||||||||||||||    
T  38549864 tattttgagacaaagaa 38549880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 29514140 - 29514259
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29514140 gagaacaaattgaatgcaatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctta 29514239  T
Q  338 tattttgagacaaagaatat 357  Q
    ||||||||||||||||||||    
T  29514240 tattttgagacaaagaatat 29514259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 21539793 - 21539676
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  21539793 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagttggtcttttttgctt 21539694  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  21539693 atattttgagacaaagaa 21539676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 35832445 - 35832324
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  35832445 gaacagattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataatagcataaaaatatgtcttttttgcttata 35832346  T
Q  340 ttttgagacaaagaatataaaa 361  Q
    ||||||||||||||||||||||    
T  35832345 ttttgagacaaagaatataaaa 35832324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 8784431 - 8784311
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||| |||||||| |||    
T  8784431 ggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaataacataataatagcataaaagttggtcttttttactt 8784332  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  8784331 atattttgagacaaagaatat 8784311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 360
Target Start/End: Original strand, 14565493 - 14565617
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||  |||||||||||    
T  14565493 ggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaaacataataatagcataaaagttagtcttttttgct 14565592  T
Q  336 tatattttgagacaaagaatataaa 360  Q
    |||||||||||||||||||||||||    
T  14565593 tatattttgagacaaagaatataaa 14565617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 247 - 395
Target Start/End: Original strand, 15858740 - 15858887
Alignment:
Q  247 ttgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgag 346  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  15858740 ttgaatgcaatttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaatttggtcttttttacttatattttgag 15858839  T
Q  347 acaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||||||||||| |||        |||||||||||| |||||||||||||    
T  15858840 acaaagaatatgaaa-tttttttgcttatattttaggacggagggagta 15858887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 33635372 - 33635255
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  33635372 ggagaacaaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgctt 33635273  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  33635272 atattttgagacaaagaa 33635255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 241 - 395
Target Start/End: Complemental strand, 43075782 - 43075629
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatat 340  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  43075782 aacaaattgaatgcaatttgcatttaattttacattggaatagatgatttgtttgaaaaaacataataatagcataaaagttggtattttttgcttatat 43075683  T
Q  341 tttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||||| ||||| ||||| | |        ||||||||||||||||||||||||||    
T  43075682 tttgacacaaaaaatatgaga-tttttttgcttatattttaagacggagggagta 43075629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 29514599 - 29514714
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  29514599 aacaaattgaatgcaatttacatttaattttacattgggaaagatgatttgtttgaaaaaacataataatagcataaaagttggtctttttt-cttatat 29514697  T
Q  341 tttgagacaaagaatat 357  Q
    |||||||||||||||||    
T  29514698 tttgagacaaagaatat 29514714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 237 - 359
Target Start/End: Complemental strand, 28492556 - 28492434
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  28492556 ggagaataagttgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaatataataatagcataaaagttggtcttttttgctt 28492457  T
Q  337 atattttgagacaaagaatataa 359  Q
    ||||||| |||||||||| ||||    
T  28492456 atattttaagacaaagaaaataa 28492434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 5091660 - 5091782
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg--aaaaaacataataatagcataaaaattgatcttttttgc 334  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||| |||||||| ||| |||||||| |    
T  5091660 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaaaacataataatggcataaaagttggtcttttttac 5091759  T
Q  335 ttatattttgagacaaagaatat 357  Q
    ||||||||||||| |||||||||    
T  5091760 ttatattttgagataaagaatat 5091782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 237 - 343
Target Start/End: Complemental strand, 22162356 - 22162249
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattga-tcttttttgct 335  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||    
T  22162356 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaacataataatagcataaaagttaagtcttttttgct 22162257  T
Q  336 tatatttt 343  Q
    ||||||||    
T  22162256 tatatttt 22162249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 4092047 - 4091929
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||| ||| | ||| |||||    
T  4092047 ggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttatttgaaaaaaatataataatagcataaaagttggtttttcttgct 4091948  T
Q  336 tatattttgagacaaagaa 354  Q
    |||||||||||||||||||    
T  4091947 tatattttgagacaaagaa 4091929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 237 - 349
Target Start/End: Complemental strand, 44803934 - 44803823
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||||| || ||||||||| |||    
T  44803934 ggagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttattt-aaaaaatataataataacataaaagtttatcttttttactt 44803836  T
Q  337 atattttgagaca 349  Q
    |||||||||||||    
T  44803835 atattttgagaca 44803823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 10478214 - 10478097
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa-aaaacataataatagcataaaaattg--atcttttttg 333  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||   | |||||||    
T  10478214 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatcatttgtttgaaaaaaacataaaaatagcataaaaattggttttttttttg 10478115  T
Q  334 cttatattttgagacaaa 351  Q
    ||||||||||||||||||    
T  10478114 cttatattttgagacaaa 10478097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 18834030 - 18834149
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg---aaaaaacataataatagcataaaaattgatcttttttg 333  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||||| |||    ||||||||||||||||| |||||| |||||||||||||    
T  18834030 ggagaacaaattgaatgcaatttgcatttaattttactttagaaa-gatgatttttttttaaaaaaaacataataatagaataaaagttgatcttttttg 18834128  T
Q  334 cttatattttgagacaaagaa 354  Q
    ||||||||||| |||||||||    
T  18834129 cttatattttgggacaaagaa 18834149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 792309 - 792423
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  792309 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 792407  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  792408 tggaataagtttcatg 792423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 15858634 - 15858744
Alignment:
Q  61 gagaagtatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgt 160  Q
    ||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  15858634 gagaaatatactccctccgtcctaatttataagcaaaaaa-cactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgt 15858732  T
Q  161 gttctccttgaa 172  Q
    ||||||||||||    
T  15858733 gttctccttgaa 15858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 21539960 - 21539846
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  21539960 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 21539862  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  21539861 tggaataagtttcatg 21539846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 14565324 - 14565440
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       || ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  14565324 tatactccctccgtcctaatttataagcaaaaaa-cattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 14565422  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  14565423 cttggaataagtttcatg 14565440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 10979374 - 10979258
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||||     
T  10979374 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacactcattaagaaaactaacacttagtgatttgaggtataattttttgtgttctt 10979276  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  10979275 cttggaataagtttcatg 10979258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 4092215 - 4092100
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||||||||| |||||||||||||       ||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  4092215 atactccctccgttctaatttataagcaaaaaa-cactacttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 4092117  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  4092116 ttggaataagtttcatg 4092100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 10478382 - 10478267
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       || ||||||||| |||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||    
T  10478382 atactccctccgtcctaatttataagcaaaaaa-cattaattcacacttattaagaaaactaacacttagtgagttgagatataattttttgtgttctcc 10478284  T
Q  168 ttgaaataagattcatg 184  Q
    |||||||||| ||||||    
T  10478283 ttgaaataagtttcatg 10478267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 15068771 - 15068665
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||     |||||      |||||||||||||||||||||||    
T  15068771 ggagaacaaattgaatgcaatttgcatttaattttactttggaaaagatgattttcttgaa-----ataat------ataaaaattgatcttttttgctt 15068683  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  15068682 atattttgagacaaagaa 15068665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 35832616 - 35832509
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||||||| |||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35832616 atactccctccatcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 35832518  T
Q  168 ttgaaataa 176  Q
    ||| |||||    
T  35832517 ttggaataa 35832509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 43075954 - 43075839
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||| |||||||    
T  43075954 tatactccctccgtcctaatttataagcaaaaaat-actaattcacacttattaagaaaactaacacttagtgatttgaggtgtaa-tttttatgttctc 43075857  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  43075856 cttgaaataagtttcatg 43075839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 8784600 - 8784484
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||  ||||||||||||       || ||||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||| |    
T  8784600 atactccctccgttttaatttataagcaaaaaaacattaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttc 8784501  T
Q  168 ttgaaataagattcatg 184  Q
    |||||||||| ||||||    
T  8784500 ttgaaataagtttcatg 8784484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 38549628 - 38549710
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||| ||||||    
T  38549628 cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctccttggaataagtttcatg 38549710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 43451708 - 43451594
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||        ||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  43451708 tactccctccgtcctaatttataagcaaaaaat-actaattcatacttattaagaaaactaacatttagtgatttgaggtatgattttttgtgttctcct 43451610  T
Q  169 tgaaataagattcatg 184  Q
    |  |||||| ||||||    
T  43451609 tagaataagtttcatg 43451594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 266 - 351
Target Start/End: Complemental strand, 10979198 - 10979114
Alignment:
Q  266 aattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaa 351  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  10979198 aattctactttggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgc-tatattttgagacaaa 10979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 9294689 - 9294605
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattg 323  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||| |||||||||| | |||||||||||    
T  9294689 agaacaaattgaatgcaatttgcatttaattttactttgaaaaagatgatttttatgaaataacataataagaacataaaaattg 9294605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 33635540 - 33635433
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||| | |    
T  33635540 atactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgagatataattttttgtgtttttc 33635442  T
Q  168 ttgaaataa 176  Q
    ||| |||||    
T  33635441 ttggaataa 33635433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 38071403 - 38071502
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  38071403 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcct 38071501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 44804101 - 44803994
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||| |||||||||||||||||||||       || ||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  44804101 tacttcctccgtcctaatttataagcaaacaa-cattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcct 44804003  T
Q  169 tgaaataag 177  Q
    || ||||||    
T  44804002 tggaataag 44803994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 43451541 - 43451435
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||           |||| |||||||||||||||||||| |||    
T  43451541 ggagaataaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttga-----------aataacataaaaattgatcttttttactt 43451453  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||| ||||||||    
T  43451452 atattttgatacaaagaa 43451435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 28492691 - 28492609
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||| ||||| |||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  28492691 cactaaatcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttggaataagtttcatg 28492609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 5091526 - 5091607
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||| | | ||||||| ||||||    
T  5091526 actaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttcttcctaaaataagtttcatg 5091607  T

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Target: chr2; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 26998356 - 26998239
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| |||| |||||||||| |||||  ||||  |||||| ||| |||||||||||    
T  26998356 gagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaatataattaaatatgataaaagttggtcttttttgct 26998258  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||  |||||||||    
T  26998257 tataatttaggacaaagaa 26998239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 29513973 - 29514071
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       || ||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||    
T  29513973 tactccctccgtcctaatttataagcaaaaaa-cagtaattcacacttattaagaaaa-taacacttagtaatttgaggtataattttttgtgttctcct 29514070  T

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Target: chr2; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 29514427 - 29514542
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       || ||||||| | ||||||| |||||||||| ||||| ||||||||||||| |||||||||| |||    
T  29514427 atactccctccgtcctaatttataagcaaaaaa-cagtaattcatacttattaaaaaaactaacacttagtaatttgaggtataattttttgtgttatcc 29514525  T
Q  168 ttgaaataagattcatg 184  Q
    ||  |||||| ||||||    
T  29514526 ttagaataagtttcatg 29514542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 38071030 - 38070918
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||| ||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||  |||||||||||||||     
T  38071030 caaattgaatgcactttacatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagtttgtcttttttgcttataa 38070932  T
Q  341 tttgagacaaagaa 354  Q
    |||| |||||||||    
T  38070931 tttgggacaaagaa 38070918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 20380162 - 20380055
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| || | ||||||||||||||||  ||||  |||||| ||| |||||||||||    
T  20380162 gagagcaaattgaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaataagataaaagttggtcttttttgct 20380064  T
Q  336 tatattttg 344  Q
    |||| ||||    
T  20380063 tataatttg 20380055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 4033678 - 4033742
Alignment:
Q  120 aagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  4033678 aagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaaataagtttcatg 4033742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 13822891 - 13822959
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||| ||| |||||||    
T  13822891 gagaacaaattgaatgcaatttgcatttaattttactttgaaaaagattatttttttaaaataacataa 13822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 28424476 - 28424360
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgag--gtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||       |||||||| | | |||||||||||||||||| |||||||||||||  ||| ||  ||||||||||||    
T  28424476 tactccctccgtcctaatttataagcaaaaaa-cactaattgatacttattaagaaaactaacacttagtgatttgagatgtaaaaaattttgtgttctc 28424378  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  28424377 cttggaataagtttcatg 28424360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 38564668 - 38564752
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataa 152  Q
    |||||||||||||||||||||||||| |        | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38564668 tatactccctccgtcctaatttataaacaaaaaacga-taattcacacttattaagaaaactaacatttagtgatttgaggtataa 38564752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 32273710 - 32273593
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||| ||||||||||| | |||||||| || |||| ||||||||||||||||  ||||  |||||| ||| |||||||||||    
T  32273710 gagagcaaattgaatgcactttacatttaattttcctttggaaaatataattt-tttgaaaaaacataattaaatatgataaaagttggtcttttttgct 32273612  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||  |||||||||    
T  32273611 tataatttaggacaaagaa 32273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 38071571 - 38071658
Alignment:
Q  250 aatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaa-----aaacataataatagcataaaaattgatctttttt 332  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||     || |||||||||| ||||||| ||| ||||||||    
T  38071571 aatgcaatttgtatataattttacattggaaaagatgatttgtttgaaaaacataatcataataataacataaaagttgctctttttt 38071658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 18833861 - 18833977
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||        || | |||||| ||||||||||| |||| || | || ||||||||||||| |||||||||| | |    
T  18833861 atactccctccgtcctaatttataagcaaaaaaatacaatttcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattc 18833960  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  18833961 ttggaataagtttcatg 18833977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 32010141 - 32010024
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| |||||| |||||| ||||||||||||||| | ||| ||||||| |||| |||||||||| |||||  ||||  |||||| |||||||||||| ||    
T  32010141 gagagcaaattaaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaaaaatataattaaatatgataaaagttgatcttttttact 32010043  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| ||||  ||||||||    
T  32010042 tataatttggaacaaagaa 32010024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 33933045 - 33933143
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttata 339  Q
    |||| ||||||||| || ||||||||||| | |||||||||||||||| ||||||| ||| ||||  ||||  ||||||||| ||||||||| ||||||    
T  33933045 caaaatgaatgcaacttacatttaatttttctttggaaaagatgatttttttgaaataacgtaattaaatataataaaaattaatctttttttcttata 33933143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 44442165 - 44442055
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattt 342  Q
    ||||||||||||| ||||||||||||||| | || |||||||| |||| ||| |||||||||||| | |  |||||| ||| || ||||| |||||| ||    
T  44442165 caaattgaatgcactttgcatttaattttcctttagaaaagataatttttttcaaaaaacataattaaataataaaagttgctc-tttttccttataatt 44442067  T
Q  343 tgagacaaagaa 354  Q
    || |||||||||    
T  44442066 tgggacaaagaa 44442055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 40808888 - 40808975
Alignment:
Q  274 attggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttgagacaaagaatataa 359  Q
    ||||||||||||||||| ||| |||||||   ||  ||||| |||||||||  |||||||||||||||||||| ||||||||| ||||    
T  40808888 attggaaaagatgattttttttaaaaaacgagattaaatagaataaaaatttgtcttttttgcttatattttgggacaaagaaaataa 40808975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 9709552 - 9709436
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    ||||||||||||||||||||||||| |||||||| | |||| |||||| |||| ||||||| ||||||||  ||||  |||||| ||  ||||||||  |    
T  9709552 gagaacaaattgaatgcaatttgca-ttaatttttctttggtaaagataattt-tttgaaacaacataattaaatatgataaaagttagtctttttttat 9709455  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| |||||||||    
T  9709454 tataatttgggacaaagaa 9709436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 11031044 - 11031161
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| |||||||||||||||   ||||||| ||  |||| ||| ||| ||||||||  ||||  |||||| |||||||||||| ||    
T  11031044 gagagcaaattgaatgcactttgcatttaattttcttttggaaatgacaattt-tttaaaacaacataattaaatatgataaaagttgatcttttttact 11031142  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||||| |||||||    
T  11031143 tataatttgagtcaaagaa 11031161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 4891768 - 4891862
Alignment:
Q  246 attgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttata 339  Q
    |||||||||| ||| ||||||||||| | ||| |||| || |||| ||||||||||||||||  ||||  |||||| ||||| |||||||||||||    
T  4891768 attgaatgcactttacatttaattttcctttgaaaaatataattt-tttgaaaaaacataattaaatatgataaaagttgatattttttgcttata 4891862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 5280692 - 5280743
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaatataa 359  Q
    ||||| |||||||||  |||||||||||||||||||| ||||||||| ||||    
T  5280692 aataggataaaaatttgtcttttttgcttatattttgggacaaagaaaataa 5280743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 25572029 - 25571947
Alignment:
Q  274 attggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||||||||||| ||| ||||||||  ||  ||||| |||||| ||  | |||||||||||||||||| |||||||||    
T  25572029 attggaaaagatgattttttttaaaaaacaagattaaatagaataaaagtttgttttttttgcttatattttgggacaaagaa 25571947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 9294822 - 9294744
Alignment:
Q  106 aattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||| ||||||||||||||||||| |  ||||  ||||| |||||| ||||||| || | ||||||||||| ||||||    
T  9294822 aattcgcatttattaagaaaactaaaagatagtagtttgaagtataattttttgtatttttcttgaaataagtttcatg 9294744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 8032790 - 8032858
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||||||||||||||| | ||| ||||||| |||| ||| ||| ||||||||    
T  8032790 gagagcaaattgaatgcattttgcatttaatttttctttgaaaaagataattt-tttaaaacaacataat 8032858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 12872160 - 12872107
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgattt 290  Q
    |||||| ||||| |||| |||||| |||||||||||| ||| ||||||||||||    
T  12872160 ggagaataaattaaatgaaatttgtatttaattttactttgaaaaagatgattt 12872107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 18455048 - 18454968
Alignment:
Q  274 attggaaaagatgatttgtttgaaaa-aacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||||||||||| ||| |||| || || | ||||  ||||||||| ||||||||||||||||||||  |||||||||    
T  18455048 attggaaaagatgatttttttaaaaacaagatta-aataaaataaaaatttatcttttttgcttatattttaggacaaagaa 18454968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 45085231 - 45085191
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||| || ||||||||||||||||||||| |||||||||    
T  45085231 ataaaagtttatcttttttgcttatattttgggacaaagaa 45085191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 239 - 357
Target Start/End: Complemental strand, 1335145 - 1335027
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1335145 agaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataataacataaaaattggtcttttttgcttat 1335046  T
Q  339 attttgagacaaagaatat 357  Q
    |||||||||||||||||||    
T  1335045 attttgagacaaagaatat 1335027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 240 - 395
Target Start/End: Complemental strand, 55400772 - 55400618
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||    
T  55400772 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagtaagtcttttttgcttata 55400673  T
Q  340 ttttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    |||||||||||||||||| |||        |||||||||||| |||||||||||||    
T  55400672 ttttgagacaaagaatatgaaa-tttttttgcttatattttaggacggagggagta 55400618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 21654282 - 21654161
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa-aaaacataataatagcataaaaattgatcttttttgct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||    
T  21654282 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacataaaagttggtcttttttgct 21654183  T
Q  336 tatattttgagacaaagaatat 357  Q
    ||||||||||||||||||||||    
T  21654182 tatattttgagacaaagaatat 21654161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 23513604 - 23513484
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  23513604 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcataaaagttggtattttttgctt 23513505  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  23513504 atattttgagacaaagaatat 23513484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 26641195 - 26641315
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  26641195 ggagaacaaattgaatgcaatttgcatttaattttaccttgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtgttttttgctt 26641294  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  26641295 atattttgagacaaagaatat 26641315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 31126249 - 31126129
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||||| ||    
T  31126249 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataatggcataaaagttggtcttttttgttt 31126150  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  31126149 atattttgagacaaagaatat 31126129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 238 - 395
Target Start/End: Complemental strand, 45781433 - 45781276
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  45781433 gagaacaaattaaatgcaacttgaatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgatcttttttgctta 45781334  T
Q  338 tattttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||||||||||||||||| || | |         |||||||||||||||||||||||||    
T  45781333 tattttgagacaaagaaaatgagatttttttttcttatattttaagacggagggagta 45781276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 46580573 - 46580453
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||| |||||||| |||    
T  46580573 ggagaacaaattgaatgcaatttgcatttaattttacattgtaaaatatgatttgtttgaaaaaacataataatggcataaaagttggtcttttttactt 46580474  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  46580473 atattttgagacaaagaatat 46580453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 241 - 359
Target Start/End: Complemental strand, 13541310 - 13541192
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatat 340  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||| |||||||    
T  13541310 aacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgttcgaaaaaacataataataacataaaagttggtctttttttcttatat 13541211  T
Q  341 tttgagacaaagaatataa 359  Q
    |||||||||||||||||||    
T  13541210 tttgagacaaagaatataa 13541192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 46820086 - 46819969
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||  ||    
T  46820086 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttaaaaaaacataaaaatagcataaaagttgatcttttttattt 46819987  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  46819986 atattttgagacaaagaa 46819969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 53020220 - 53020099
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa-aaaacataataatagcataaaaattgatcttttttgct 335  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||| | |||||| ||    
T  53020220 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaaacataataatagcataaaagttggtattttttact 53020121  T
Q  336 tatattttgagacaaagaatat 357  Q
    |||||||||||||||| |||||    
T  53020120 tatattttgagacaaaaaatat 53020099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 46296160 - 46296266
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  46296160 ggagaacaaattaaatgcaacttgcatttaattttacatcggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgatcttttttgctt 46296259  T
Q  337 atatttt 343  Q
    |||||||    
T  46296260 atatttt 46296266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 237 - 360
Target Start/End: Complemental strand, 28793199 - 28793075
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaatttt-acattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    |||||||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  28793199 ggagaacaaattaaatgcaacttgcatttaatttttacattagaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgct 28793100  T
Q  336 tatattttgagacaaagaatataaa 360  Q
    |||||||||||||||| || |||||    
T  28793099 tatattttgagacaaataaaataaa 28793075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 37324171 - 37324291
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg----aaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||  ||||||| ||| ||||||||||||    
T  37324171 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaaaaacataataatgacataaaagttggtcttttttgctt 37324270  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||| |||||||||||||    
T  37324271 atattttaagacaaagaatat 37324291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 237 - 359
Target Start/End: Complemental strand, 51255223 - 51255103
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||| |||    
T  51255223 ggagaacaaattaaatgcaacttgcatttaattttagattggaaaagatgatttgtttgaaaaaacata--aataacataaaagttgatcttttttactt 51255126  T
Q  337 atattttgagacaaagaatataa 359  Q
    |||||||||||||||||| ||||    
T  51255125 atattttgagacaaagaaaataa 51255103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 237 - 347
Target Start/End: Original strand, 52172093 - 52172204
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  52172093 ggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaaacataaaaatagcataaaaattaatcttttttgct 52172192  T
Q  336 tatattttgaga 347  Q
    ||||||||||||    
T  52172193 tatattttgaga 52172204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 43575994 - 43575881
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  43575994 ggagaataaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttga-aaaacataaaaatagcataaaagttgatcttttttgctt 43575896  T
Q  337 atattttgagacaaa 351  Q
    |||||||||||||||    
T  43575895 atattttgagacaaa 43575881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 357
Target Start/End: Complemental strand, 51426654 - 51426534
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa--aaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||| ||||||| ||| ||||||||||||    
T  51426654 agaacaaattgaatgtaatttgcatttaattttacattagaaaagatgatttgtttgaaaaaaaacataagaataacataaaagttggtcttttttgctt 51426555  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||| |||||||||||||    
T  51426554 atattttaagacaaagaatat 51426534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 16739263 - 16739355
Alignment:
Q  262 atttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  16739263 atttaattttacattggaaaagatgatttgtttgaaaaaatataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 16739355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 21654451 - 21654335
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  21654451 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 21654353  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  21654352 cttgaaataagtttcatg 21654335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 354
Target Start/End: Original strand, 36189092 - 36189206
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtt-tgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||||| |||||||  || ||||||||||||||    
T  36189092 gaacaaattgaatgcaatttgcatttaattttactttggaaaagaagattttttgtgaaaaaacataataataacataaaagatggtcttttttgcttat 36189191  T
Q  339 attttgagacaaagaa 354  Q
    |||||| |||||||||    
T  36189192 attttg-gacaaagaa 36189206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 32322322 - 32322439
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||| ||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||  |  |||||||| |||    
T  32322322 ggagaataaattaaatgcaacttgtatttaattttacattgaaaaagataatttgtttgaaaaaacataaaaatagcataaaatctagtcttttttactt 32322421  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  32322422 atattttgagacaaagaa 32322439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 32322153 - 32322269
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  32322153 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctc 32322251  T
Q  167 cttgaaataagattcatg 184  Q
    |||| |||||| ||||||    
T  32322252 cttggaataagtttcatg 32322269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 55400944 - 55400828
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  55400944 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 55400846  T
Q  167 cttgaaataagattcatg 184  Q
     ||| |||||| ||||||    
T  55400845 tttggaataagtttcatg 55400828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 26641027 - 26641142
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  26641027 atactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcc 26641125  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  26641126 ttggaataagtttcatg 26641142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 34022622 - 34022541
Alignment:
Q  273 cattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||    
T  34022622 cattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaaaatggttttttttgcttatattttgagacaaagaa 34022541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 53020389 - 53020280
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  53020389 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacatttagtgatttgagttataattttttgtgttctt 53020291  T
Q  167 cttgaaataag 177  Q
    |||| ||||||    
T  53020290 cttggaataag 53020280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 31126384 - 31126309
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  31126384 cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataag 31126309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 46580707 - 46580632
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  46580707 cactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataag 46580632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 34022803 - 34022696
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||||| |||||||||||||||||       |||||||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  34022803 tactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcct 34022705  T
Q  169 tgaaataag 177  Q
    |||||||||    
T  34022704 tgaaataag 34022696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 49068088 - 49068018
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49068088 ggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataat 49068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 45347661 - 45347743
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||| ||||||    
T  45347661 cactaattcatatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatg 45347743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 37323997 - 37324106
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||||| |||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||| ||    
T  37323997 tatactccctccgttctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttatc 37324095  T
Q  167 cttgaaataag 177  Q
     ||||||||||    
T  37324096 tttgaaataag 37324106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 52252072 - 52252004
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52252072 gagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 52252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 49068220 - 49068141
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  49068220 taattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcctataaataagtttcatg 49068141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 46295990 - 46296107
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataa-ctttttgtgttct 165  Q
    |||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||  |||||||||||||||||||  ||||||||||||    
T  46295990 tatactccctccgtcctaatttataagtaaaaaat-actaattcacacttattaagaaaactaacggttagtgatttgaggtataatttttttgtgttct 46296088  T
Q  166 ccttgaaataagattcatg 184  Q
    ||||| |||||| ||||||    
T  46296089 ccttggaataagtttcatg 46296107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 22456089 - 22456206
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||| |||||||||||    
T  22456089 gagagcaaattgaatgcattttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttggtcttttttgct 22456187  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| || ||||||    
T  22456188 tataatttgggataaagaa 22456206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 22479135 - 22479252
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||  |||||||||||    
T  22479135 gagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagtttgtcttttttgct 22479233  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| |||||||||    
T  22479234 tataatttgggacaaagaa 22479252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 28793331 - 28793260
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |||||| |||||    
T  28793331 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttatccttggaataa 28793260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 46820206 - 46820143
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttct 165  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  46820206 cactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttct 46820143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 51426824 - 51426728
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttct 165  Q
    |||||||||||||||||||||||||||       |||||||| ||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  51426824 atactccctccgtcctaatttataagcaaaaaa-cactaatttacgcttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttct 51426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 16739081 - 16739190
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||     ||||||||||||| || ||||||||||||    
T  16739081 tactccctccgtcctaatttataagccaaaaa-cactaattcacacttattaagaaaactaacatt-----atttgaggtataatttgttgtgttctcct 16739174  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  16739175 tggaataagtttcatg 16739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 23514648 - 23514554
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtg 161  Q
    ||||||||||||||| ||||||||||||       || |||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||    
T  23514648 tatactccctccgtcttaatttataagcaaaaaaacattaattcacatttattaagaaaactaacacttattgatttgaggtataattttgtgtg 23514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 23209360 - 23209478
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgc 334  Q
    |||||||| | |||||||||||||||||||||||  | |||| ||||||||||| ||||||| ||||||||  ||||  |||||| ||| ||||||||||    
T  23209360 ggagaacataatgaatgcaatttgcatttaatttctctttgggaaagatgattt-tttgaaataacataattaaatatgataaaagttggtcttttttgc 23209458  T
Q  335 ttatattttgagacaaagaa 354  Q
    ||||| ||| ||||||||||    
T  23209459 ttataatttaagacaaagaa 23209478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 21214278 - 21214161
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| |||||||||||||||   ||||||||||| || | ||||||||||||||||  |||   |||||| |||||||||||||||    
T  21214278 gagagcaaattgaatgcactttgcatttaattttcatttggaaaagataatat-tttgaaaaaacataattaaatgtgataaaagttgatcttttttgct 21214180  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| |||||||||    
T  21214179 tataatttgggacaaagaa 21214161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 49067080 - 49066993
Alignment:
Q  307 taatagcataaaaattgatcttttttgcttatattttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| | |        ||||||||||||||||||||||||||    
T  49067080 taatagcataaaagttgatcttttttgcttatattttgagacaaagaatatgata-attttttgcttatattttaagacggagggagta 49066993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 10252043 - 10251931
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||||| ||||||||| | ||||||||||| || | ||||||||||||||||  ||||  |||||| ||| | |||||||||||||     
T  10252043 caaattgaatgcactttgcttttaattttcctttggaaaagataatct-tttgaaaaaacataattaaatatgataaaagttggtattttttgcttataa 10251945  T
Q  341 tttgagacaaagaa 354  Q
    ||||||||||||||    
T  10251944 tttgagacaaagaa 10251931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 43576129 - 43576047
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||| | |||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||  |||||| ||||||    
T  43576129 cactaattcatacttattaagaaaattaacacttagtgatttgaggtatgattttttgtgttctccttcgaataagtttcatg 43576047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 38401411 - 38401300
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatatt 341  Q
    ||||| |||| | |||||||||||||||   ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||||||||||||||||||| |    
T  38401411 aaattaaatgtactttgcatttaattttcttttggaaaagattattt-tttgaaaaaacataattaaatatgataaaagttgatcttttttgcttataat 38401313  T
Q  342 ttgagacaaagaa 354  Q
    ||| |||||||||    
T  38401312 ttgggacaaagaa 38401300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 349
Target Start/End: Complemental strand, 49583997 - 49583890
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||| ||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||| |||||||||||||||     
T  49583997 caaattgaatgcactttacatttaatttttctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttggtcttttttgcttataa 49583899  T
Q  341 tttgagaca 349  Q
    |||| ||||    
T  49583898 tttgggaca 49583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 47444059 - 47444174
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat-----aatagcataaaaattgatcttttttgctta 337  Q
    ||||||||||||| ||||||||||||||| | ||||||||||| |||| |||||||||||||| |     ||||  |||||| ||||| |||||||||||    
T  47444059 caaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacatagtaattaaatatgataaaagttgatattttttgctta 47444157  T
Q  338 tattttgagacaaagaa 354  Q
    || |||| |||||||||    
T  47444158 taatttgggacaaagaa 47444174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 1335279 - 1335200
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||| |||||||||||||||| | |||||| |||||| ||| | ||||||||||||||||| |||||| ||||||    
T  1335279 taattcacacttattaagaaaactaatacttagtgttttgagatattattttttgtgttctccttggaataagtttcatg 1335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 2994499 - 2994616
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||  || ||||| ||    
T  2994499 gagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatacgataaaagtttgtcattttttct 2994597  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| |||||||||    
T  2994598 tataatttgggacaaagaa 2994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 51255355 - 51255276
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||| ||||||||||||||||||||  |||| || ||| |||||| ||||||||||||||| |||||||| ||||||    
T  51255355 taattcatatttattaagaaaactaacacgtagtaatatgaagtataattttttgtgttctcctagaaataagtttcatg 51255276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 10114943 - 10114832
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||||| ||||||||| | ||||||||||| || || |||||||||||||||  ||||  |||||| ||| | |||||||||||||     
T  10114943 caaattgaatgcactttgcttttaattttcctttggaaaagataatctg-ttgaaaaaacataattaaatatgataaaagttg-tattttttgcttataa 10114846  T
Q  341 tttgagacaaagaa 354  Q
    ||||||||||||||    
T  10114845 tttgagacaaagaa 10114832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 45347814 - 45347868
Alignment:
Q  300 aacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  45347814 aacataaaaatagtataaaagttgatcttttttgcttatattttgagacaaagaa 45347868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 333
Target Start/End: Complemental strand, 48291859 - 48291763
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttg 333  Q
    |||| ||||||||||||| ||| ||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| |||||||||||||    
T  48291859 gagagcaaattgaatgcactttccatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttgatcttttttg 48291763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 52252192 - 52252126
Alignment:
Q  118 ttaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||| |||| |||||| ||||||    
T  52252192 ttaagaaaactaacacttagtgatttgaagtataattttttgtgttcttcttggaataagtttcatg 52252126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 13541439 - 13541347
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgt 160  Q
    |||||||||||||| ||||||||||| |       |||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  13541439 tatactccctccgttctaatttataa-ccaaaaaacactaattcacacttattaagaaaattaacacttagtaatttgaggtataattttttgt 13541347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 34194925 - 34194808
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| |||| |||||||| ||||||||||||||| | ||||||||||| |||| ||||||| ||||||||  || |  |||||| ||| |||||||||||    
T  34194925 gagagcaaactgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaacaacataattaaaaatgataaaagttggtcttttttgct 34194827  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| | || |||||||||    
T  34194826 tataatctgggacaaagaa 34194808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 54725684 - 54725801
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| |||| ||||||||||   ||| ||||||| |||| |||||||||| |||||  ||||  |||||| | |||||||||||||    
T  54725684 gagagcaaattgaatgcactttgtatttaattttcttttgaaaaagataattt-tttgaaaaaatataattaaatatgataaaagtagatcttttttgct 54725782  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| |||||||||    
T  54725783 tataatttgggacaaagaa 54725801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 30454805 - 30454873
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||| ||||||||    
T  30454805 gagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaacaacataat 30454873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 51309618 - 51309504
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||| ||||||| |||||||||||       ||| |||||||||||||||||||||  || |  ||||  |||||||||||| |||||||||||| ||    
T  51309618 tactccttccgtcccaatttataagcaaaaaaacacaaattcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttct 51309519  T
Q  169 tgaaataagattcat 183  Q
    || |||||| |||||    
T  51309518 tggaataagtttcat 51309504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 36188920 - 36189036
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    |||||||||||| ||| |||||||||||       ||| |||||||| ||||||||||| |||| |   ||| ||||||||||||  ||||||| |||||    
T  36188920 tatactccctccatcccaatttataagcaaaaaa-cacaaattcacacttattaagaaatctaaaacacagtaatttgaggtatagttttttgtattctc 36189018  T
Q  167 cttgaaataagattcatg 184  Q
    ||||||||||| ||||||    
T  36189019 cttgaaataagtttcatg 36189036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 45781549 - 45781487
Alignment:
Q  122 gaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||| ||  |||||| ||||||    
T  45781549 gaaaactaacacttagtgatttgatgtataattttttgtgttctctttagaataagtttcatg 45781487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 51309447 - 51309397
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgattt 290  Q
    |||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  51309447 gaacaaattgaatgcaatttgcatttaattttaatttagaaaagattattt 51309397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 7886698 - 7886766
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||| ||||||||||||| ||||||||| ||||| | |||||||||||||||| ||| ||| ||||||||    
T  7886698 gagagcaaattgaatgcactttgcatttgatttttctttggaaaagatgattt-tttaaaacaacataat 7886766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 29676536 - 29676596
Alignment:
Q  246 attgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||||||| |||| |||||||||| | ||||||||||| |||| ||||||||||||||||    
T  29676536 attgaatgcactttgaatttaattttcctttggaaaagataattt-tttgaaaaaacataat 29676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 7615008 - 7615070
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    ||||||||||||| ||||||||| |||| | ||| |||||||||||| ||||||| ||||||||    
T  7615008 aaattgaatgcaagttgcatttagttttcctttgaaaaagatgattt-tttgaaataacataat 7615070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 10014300 - 10014238
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||||||||| ||||| ||||||||| | ||||||||||| || | ||||||||||||||||    
T  10014300 aaattgaatgcactttgcttttaattttcctttggaaaagataatct-tttgaaaaaacataat 10014238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 8097099 - 8097164
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacat 304  Q
    |||| ||||||||||||| ||||||||||||||| | |||||||| || |||| ||||||| |||||    
T  8097099 gagagcaaattgaatgcactttgcatttaattttcctttggaaaaaataattt-tttgaaacaacat 8097164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 354
Target Start/End: Original strand, 33974747 - 33974776
Alignment:
Q  325 tcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||||||||||||||||||||||||    
T  33974747 tcttttttgcttatattttgagacaaagaa 33974776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 50730059 - 50730010
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaatat 357  Q
    ||||| ||||||||| ||||||||| ||||||||||| |||||| |||||    
T  50730059 aataggataaaaatttatcttttttacttatattttgggacaaaaaatat 50730010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 3972318 - 3972286
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattt 270  Q
    |||||||||||||||| ||||||||||||||||    
T  3972318 gagaacaaattgaatgtaatttgcatttaattt 3972286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 3997560 - 3997592
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattt 270  Q
    |||||||||||||||| ||||||||||||||||    
T  3997560 gagaacaaattgaatgtaatttgcatttaattt 3997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 34105544 - 34105500
Alignment:
Q  262 atttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||    
T  34105544 atttaattttacttttgaaaagatgatttttttgaaataacataa 34105500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 54465068 - 54465108
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  54465068 ataaaaatttatcttttttgcttatattttaggacaaagaa 54465108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 12278742 - 12278622
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  12278742 ggagaacaaattgaatgcaatttgcatttaattttacatttgaaaaaatgatttgtttgaaaaaacataataataacataaaagttgatcttttttgctt 12278643  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  12278642 atattttgagacaaagaatat 12278622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 17721930 - 17722050
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  17721930 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaatatgatttctttgaaaaaacataataatagcataaaagttggtcttttttgctt 17722029  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  17722030 atattttgagacaaagaatat 17722050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 10227948 - 10227828
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  10227948 ggagaacacattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttggaaaaacataataatagcataaaagttggtcttttttgctt 10227849  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  10227848 atattttgagacaaagaatat 10227828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 374135 - 374017
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  374135 ggagaacaaattgaatgcaatttgcatttaattttacatcggaaaatatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgctt 374036  T
Q  337 atattttgagacaaagaat 355  Q
    ||||||||||| |||||||    
T  374035 atattttgagataaagaat 374017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 237 - 359
Target Start/End: Complemental strand, 30949171 - 30949049
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||    
T  30949171 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttagtcttttttgctt 30949072  T
Q  337 atattttgagacaaagaatataa 359  Q
    |||||||||||||||||| ||||    
T  30949071 atattttgagacaaagaaaataa 30949049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 237 - 395
Target Start/End: Complemental strand, 30766482 - 30766325
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  30766482 ggagaacaaattcaatgcaatttgcatttaattttacattgaaaaaaataatttctttgaaaaaacataataataacataaaagttgattttttttgctt 30766383  T
Q  337 atattttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||||||||||||||||||||| | |        ||||||||||||||||||||||||||    
T  30766382 atattttgagacaaagaatatgaga-tttttttgcttatattttaagacggagggagta 30766325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 33756292 - 33756172
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| | |||||| |||    
T  33756292 ggaggacaaattgaatgcaatttgcatttaattttacattgaaaaaaatgatttgtttgaaaaaacataataatagcataaaagttggtatttttttctt 33756193  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||||||| |||||||||    
T  33756192 atattttgagataaagaatat 33756172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 17598328 - 17598215
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || ||| |||||||||||||    
T  17598328 gagaataaattgaatgcaatttgcatttaattttacattggaaaagaagatttgtttgaaaaaacataataataacatacaagttggtcttttttgctta 17598229  T
Q  338 tattttgagacaaa 351  Q
    ||||||| ||||||    
T  17598228 tattttgggacaaa 17598215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 31887243 - 31887360
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg-aaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| |||||| |||||    
T  31887243 gagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataaaaatagcataaaagttggtcttttatgctt 31887342  T
Q  337 atattttgagacaaagaa 354  Q
    ||| ||||||||||||||    
T  31887343 ataatttgagacaaagaa 31887360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 10228116 - 10228002
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  10228116 atactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcc 10228018  T
Q  168 ttgaaataagattcat 183  Q
    |||||||||| |||||    
T  10228017 ttgaaataagtttcat 10228002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30949339 - 30949224
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    ||||||||||| |||||||||||||||        ||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  30949339 atactccctccatcctaatttataagcaaaaaat-actaattcacacttattaacaaaactaacatttattgatttgaggtataattttttgtgttctcc 30949241  T
Q  168 ttgaaataagattcatg 184  Q
    |||||||||| ||||||    
T  30949240 ttgaaataagtttcatg 30949224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 17721762 - 17721877
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       || ||||||||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  17721762 atactccctccgtcctaatttataagcaaaaaa-cattaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcc 17721860  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  17721861 ttggaataagtttcatg 17721877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 5121410 - 5121524
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||| ||||||||||||||  |||||||||||||||    
T  5121410 tactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgttctcct 5121508  T
Q  169 tgaaataagattcatg 184  Q
    | ||||||| ||||||    
T  5121509 taaaataagtttcatg 5121524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 30766649 - 30766535
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    |||||||| |||||||||||||||||        ||||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  30766649 tactcccttcgtcctaatttataagcaaaaaat-actaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 30766551  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  30766550 tggaataagtttcatg 30766535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 374302 - 374188
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||| |||||||| | ||||| ||||||||||||| |||||||||||||||    
T  374302 tactccctccgtcctaatttataagcaaaaaa-cactaattcacatttattaaaaaaactaatacttagttatttgaggtataattttttgtgttctcct 374204  T
Q  169 tgaaataagattcatg 184  Q
    |  |||||| ||||||    
T  374203 tagaataagtttcatg 374188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 12278873 - 12278795
Alignment:
Q  106 aattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||  |||||| ||||||    
T  12278873 aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttagaataagtttcatg 12278795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 3888464 - 3888362
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||||||||||||||||| ||||||||||||||| | ||| ||||||| |||| ||||||||||||||||  ||||  |||||| ||| |||||||||||    
T  3888464 gagaacaaattgaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaaaaacataattaaatatgataaaagttggtcttttttgct 3888366  T
Q  336 tata 339  Q
    ||||    
T  3888365 tata 3888362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 32882814 - 32882880
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaca 303  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||| ||||    
T  32882814 ggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatgacttttttgaaataaca 32882880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 5300720 - 5300831
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| |||| ||||||||||   ||||||||||| |||| ||||||||||||||||  ||||  |||||| |||||| ||||||||||||     
T  5300720 caaattgaatgcactttgtatttaattttcttttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttgatc-tttttgcttataa 5300817  T
Q  341 tttgagacaaagaa 354  Q
    |||| |||||||||    
T  5300818 tttgggacaaagaa 5300831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 4032024 - 4031907
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| ||||||||||||||| | || |||||||| |||| || |||||||||||||  ||||  || ||| ||| |||||| ||||    
T  4032024 gagagcaaattgaatgcactttgcatttaattttccctttgaaaagataattt-ttcgaaaaaacataattaaatatgattaaagttggtcttttatgct 4031926  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| ||||||| ||||||    
T  4031925 tataatttgagataaagaa 4031907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 16524417 - 16524349
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||||||||||||||| |||||||||||||||   |||||||| || |||| ||||||||||||||||    
T  16524417 gagaacaaattgaatgcactttgcatttaattttcttttggaaaaaataattt-tttgaaaaaacataat 16524349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 17598450 - 17598390
Alignment:
Q  116 tattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    ||||||||||| ||||| ||| ||||||||||||||| ||||||||||||| ||| |||||    
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataa 17598390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 5822162 - 5822260
Alignment:
Q  258 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||  | |||||||||||||||| ||| ||||||||||||  ||||  |||||||||  ||||||||| ||||| |||| |||| ||||    
T  5822162 ttgcatttaatttctctttggaaaagatgatttttttaaaaaaacataattaaatatgataaaaattagtcttttttgtttataatttgggacagagaa 5822260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 4987980 - 4987914
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 305  Q
    |||| ||||||||||||| ||||||||||||||| | ||| ||||||| |||| ||| ||||||||||    
T  4987980 gagagcaaattgaatgcattttgcatttaattttcctttgaaaaagataattt-tttaaaaaaacata 4987914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 16655233 - 16655172
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaa 299  Q
    ||||| |||| |||||||||||||||||||||||  ||||| |||| ||||||| ||||||||    
T  16655233 ggagagcaaaatgaatgcaatttgcatttaatttctcattgaaaaatatgattt-tttgaaaa 16655172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 31887074 - 31887168
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgtt 163  Q
    |||||||||||| |||||||||||||       || ||||| ||| ||||||| |||||||||| | ||||||||||  ||| | ||||||||||    
T  31887074 tactccctccgttctaatttataagcaaaaaaacattaatttacacttattaataaaactaacactcagtgatttgatatatgattttttgtgtt 31887168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 31690741 - 31690861
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||    
T  31690741 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgttt 31690840  T
Q  337 atattttgagacaaagaatat 357  Q
    ||||||||||||||| |||||    
T  31690841 atattttgagacaaaaaatat 31690861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 8146135 - 8146254
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  8146135 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagttggtcttttttgctta 8146234  T
Q  338 tattttgagacaaagaatat 357  Q
    |||||| |||||||||||||    
T  8146235 tattttaagacaaagaatat 8146254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 13146766 - 13146647
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctta 337  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  13146766 gagaacaaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgttta 13146667  T
Q  338 tattttgagacaaagaatat 357  Q
    |||||||| |||||||||||    
T  13146666 tattttgatacaaagaatat 13146647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 241 - 395
Target Start/End: Original strand, 37066348 - 37066501
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||  ||||||||||||||||    
T  37066348 aacaaattgaatgcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaatataataatagcaaaaaaattagtcttttttgcttatat 37066447  T
Q  341 tttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagta 395  Q
    ||| ||||||||||||| |||        |||||||||||| |||||||||||||    
T  37066448 tttaagacaaagaatatgaaa-tttttttgcttatattttaggacggagggagta 37066501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 237 - 356
Target Start/End: Original strand, 30086669 - 30086788
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||| |||    
T  30086669 ggagaataaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacataataatgacataaaagttggtcttttttactt 30086768  T
Q  337 atattttgagacaaagaata 356  Q
    ||||||||||||||||||||    
T  30086769 atattttgagacaaagaata 30086788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 237 - 399
Target Start/End: Complemental strand, 20914897 - 20914736
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||    
T  20914897 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtattttttgctt 20914798  T
Q  337 atattttgagacaaagaatataaaannnnnnnngcttatattttaagacggagggagtactta 399  Q
    ||||||| |||||||||| ||  ||        ||||||||||||| ||||||||||||||||    
T  20914797 atattttaagacaaagaaaat-gaattttttttgcttatattttaaaacggagggagtactta 20914736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 35462846 - 35462956
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatatttt 343  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  35462846 aaattgaatgaaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcataaaagttggtcttttttgcttatatttt 35462945  T
Q  344 gagacaaagaa 354  Q
    |||||||||||    
T  35462946 gagacaaagaa 35462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 42365073 - 42364957
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    || |||| ||||||| ||| ||||||||||||    
T  42365073 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa----aacaataacataaaagttggtcttttttgctt 42364978  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  42364977 atattttgagacaaagaatat 42364957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 8541685 - 8541799
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||  ||    
T  8541685 ggagaacaaatttaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagttggtctttttttgtt 8541784  T
Q  337 atattttgagacaaa 351  Q
    ||||||| |||||||    
T  8541785 atattttaagacaaa 8541799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 237 - 354
Target Start/End: Complemental strand, 24439610 - 24439493
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgt-ttgaaaaaacataataatagcataaaaattgatcttttttgct 335  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||| ||||||| |||||||||||||||    
T  24439610 ggagaacaaattgaatgcaatttgcatttaattttactttggaaa-gatgatttttgttgaaaaaacataataataacataaaagttgatcttttttgct 24439512  T
Q  336 tatattttgagacaaagaa 354  Q
    ||||||||| |||||||||    
T  24439511 tatattttgcgacaaagaa 24439493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 239 - 357
Target Start/End: Complemental strand, 12638925 - 12638808
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    ||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| ||  |||||||| |||||    
T  12638925 agaacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacataataatagcataaaagttagtctttttt-cttat 12638827  T
Q  339 attttgagacaaagaatat 357  Q
    ||||||||| ||| |||||    
T  12638826 attttgagataaataatat 12638808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 8143970 - 8143858
Alignment:
Q  239 agaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttat 338  Q
    |||||||||||||||||||||  |||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  8143970 agaacaaattgaatgcaatttatatttaattttactttgaaaaagaagatttatttgaaaaaacataataatagcataaaagttgatcttttttgcttat 8143871  T
Q  339 attttgagacaaa 351  Q
    ||| || ||||||    
T  8143870 attatgggacaaa 8143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 241 - 353
Target Start/End: Original strand, 24432525 - 24432637
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatat 340  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||| ||| | ||||||||||||||    
T  24432525 aacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaatataaaaatagtataaaagttggttttttttgcttatat 24432624  T
Q  341 tttgagacaaaga 353  Q
    |||||||||||||    
T  24432625 tttgagacaaaga 24432637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 240 - 343
Target Start/End: Original strand, 31316925 - 31317028
Alignment:
Q  240 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttata 339  Q
    ||||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  31316925 gaacagattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaataacataaaagttgatcttttttgcttata 31317024  T
Q  340 tttt 343  Q
    ||||    
T  31317025 tttt 31317028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 16286204 - 16286321
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||||| | ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| ||| |||||||| ||  |||||||| |||    
T  16286204 ggagaacaaactaaatgcaacttgcatttaattttacattgaaaaagataatttgtttgaaaaaacataaaaattgcataaaagtttgtcttttttactt 16286303  T
Q  337 atattttgagacaaagaa 354  Q
    ||||||||||||||||||    
T  16286304 atattttgagacaaagaa 16286321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 25962594 - 25962690
Alignment:
Q  258 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||  | ||||||||||||||||||||||||||||    
T  25962594 ttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtttgtattttttgcttatattttgagacaaagaa 25962690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 31316755 - 31316869
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  31316755 tactccctccgtcctaatttataagcaaaaaa-cactaattcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 31316853  T
Q  169 tgaaataagattcatg 184  Q
    || |||||| ||||||    
T  31316854 tggaataagtttcatg 31316869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 8145967 - 8146081
Alignment:
Q  69 tactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcct 168  Q
    ||||||||||||||||||||||||||       || ||||||||| |||||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  8145967 tactccctccgtcctaatttataagcaaaaaa-cattaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctcct 8146065  T
Q  169 tgaaataagattcatg 184  Q
    ||||||||| ||||||    
T  8146066 tgaaataagtttcatg 8146081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 20452543 - 20452664
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatc-ttttttgct 335  Q
    |||||||||||||||| |||||| |||||||||||||| || || |||||| || |||||||||| ||||||| |||||||||||||||| |||||| ||    
T  20452543 ggagaacaaattgaatacaatttacatttaattttacaatgaaagagatgaattatttgaaaaaatataataacagcataaaaattgatctttttttact 20452642  T
Q  336 tatattttgagacaaagaatat 357  Q
    |||||||||| ||||| |||||    
T  20452643 tatattttgaaacaaacaatat 20452664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 30086498 - 30086616
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataacttttt-gtgttct 165  Q
    |||||||||||||| |||||||||||||       || ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  30086498 tatactccctccgttctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacatttagtaatttgaggtataattttttcgtgttct 30086597  T
Q  166 ccttgaaataagattcatg 184  Q
    |||||||||||| ||||||    
T  30086598 ccttgaaataagtttcatg 30086616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 25962401 - 25962516
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||        | ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  25962401 atactccctccgtcctaatttataagcaaaaaagaa-taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 25962499  T
Q  168 ttgaaataagattcatg 184  Q
    ||| |||||| ||||||    
T  25962500 ttggaataagtttcatg 25962516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 17825319 - 17825425
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttg-ct 335  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||  |||||| |||||||||||||  ||||||||| ||    
T  17825319 ggaggacaaattgaatgtaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaa--ataatattagcataaaaatttgtcttttttgcct 17825416  T
Q  336 tatattttg 344  Q
    |||||||||    
T  17825417 tatattttg 17825425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 24432389 - 24432468
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  24432389 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatg 24432468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 12639062 - 12638988
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataa 176  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  12639062 cactaattcacacttattaagaaaactaacatttagttatttgaggtataattttttgtgttctccttggaataa 12638988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 35462671 - 35462773
Alignment:
Q  67 tatactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctc 166  Q
    ||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  35462671 tatactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgttttctc 35462769  T
Q  167 cttg 170  Q
    ||||    
T  35462770 cttg 35462773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 2002254 - 2002323
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 306  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||    
T  2002254 ggagaacaaattgaatgcaatttgcatttaattttattttggaaaagatgatttttttgaaataacataa 2002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 20915031 - 20914950
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||||| |||||||||||||||||| |||||||||| || ||||| ||||||||||||||||| |||||| ||||||    
T  20915031 actaattcacacttattaagaaaactaacacttagtgatttaagatataattttttgtgttctccttggaataagtttcatg 20914950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 8541521 - 8541625
Alignment:
Q  72 tccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttga 171  Q
    |||||||||||||||||||||||       || ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| |||| ||||     
T  8541521 tccctccgtcctaatttataagcaaaaaa-cattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattcttcttgg 8541619  T
Q  172 aataag 177  Q
    ||||||    
T  8541620 aataag 8541625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 16286072 - 16286151
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||| |||||| ||||||    
T  16286072 taattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctctttggaataagtttcatg 16286151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 13146901 - 13146827
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||    
T  13146901 actaattcatacttattatgaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaataag 13146827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 42365208 - 42365126
Alignment:
Q  102 cactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataagattcatg 184  Q
    |||||||||| |||||||||||||||||| | |||||||||||||||| || ||||||||||||  ||| |||||| ||||||    
T  42365208 cactaattcatatttattaagaaaactaatacttagtgatttgaggtacaattttttgtgttcttattggaataagtttcatg 42365126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 3463937 - 3464040
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||||||| |||||||||||||||   |||||||| || |||| ||| ||||||||||||  ||||  |||||| |||||||||||||||    
T  3463937 gagagcaaattgaatgcactttgcatttaattttttcttggaaaaaataatttttttaaaaaaacataattaaatatgataaaagttgatcttttttgct 3464036  T
Q  336 tata 339  Q
    ||||    
T  3464037 tata 3464040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 37066212 - 37066284
Alignment:
Q  105 taattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttgaaataag 177  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||| |||| |||| ||||||    
T  37066212 taattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattcttcttggaataag 37066284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 28907107 - 28906990
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||||||||||||||||| |||||||||||||||  |||| ||||||| |||| ||||| ||||||||||  ||||  |||| | ||| |||||||||||    
T  28907107 gagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataattaaatatgataacagttggtcttttttgct 28907009  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| || ||||||    
T  28907008 tataatttgggataaagaa 28906990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 28943502 - 28943385
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||||||||||||||||| |||||||||||||||  |||| ||||||| |||| ||||| ||||||||||  ||||  |||| | ||| |||||||||||    
T  28943502 gagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataattaaatatgataacagttggtcttttttgct 28943404  T
Q  336 tatattttgagacaaagaa 354  Q
    |||| |||| || ||||||    
T  28943403 tataatttgggataaagaa 28943385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 31690607 - 31690674
Alignment:
Q  103 actaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctccttg 170  Q
    ||||||||||| |||||||||||| ||| | ||||||||||||||||||| |||||||||||| ||||    
T  31690607 actaattcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttcttg 31690674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 32433628 - 32433573
Alignment:
Q  302 cataataatagcataaaaattgatcttttttgcttatattttgagacaaagaatat 357  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  32433628 cataataatagtataaaaatttgtcttttttgcttatattttgagacaaagaatat 32433573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 8506471 - 8506359
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||| ||||||||  ||||  | |||| |||||||||||| ||||||     
T  8506471 caaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaacaacataattaaatatgacaaaagttgatcttttttacttataa 8506373  T
Q  341 tttgagacaaagaa 354  Q
    |||| || ||||||    
T  8506372 tttgggagaaagaa 8506359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 339
Target Start/End: Complemental strand, 8959679 - 8959577
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| ||||||||| ||| ||| ||||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||| |||||||||||    
T  8959679 gagagcaaattgaacgcactttacatttaatttttctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttggtcttttttgct 8959581  T
Q  336 tata 339  Q
    ||||    
T  8959580 tata 8959577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 16153467 - 16153581
Alignment:
Q  238 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgct 335  Q
    |||| |||||| |||||| |||| |||||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||  |||||||||||    
T  16153467 gagagcaaattaaatgcactttgtatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagtttgtcttttttgct 16153565  T
Q  336 tatattttgagacaaa 351  Q
    |||  |||| ||||||    
T  16153566 tatcatttgggacaaa 16153581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 1144624 - 1144720
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttata 339  Q
    ||||||||||||| ||||||||||||||| | ||||||||||| |||| ||||||||| ||| ||  ||||  |||||| ||| |||||||||||||||    
T  1144624 caaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaa-cattattaaatatgataaaagttggtcttttttgcttata 1144720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 10154055 - 10154152
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttata 339  Q
    ||||||||||||| ||||||||||||||| | |||||| |||| |||| ||||||| ||||||||  ||||  |||||| ||  |||||||||||||||    
T  10154055 caaattgaatgcactttgcatttaatttttctttggaagagataattt-tttgaaacaacataattaaatatgataaaagtttgtcttttttgcttata 10154152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 359
Target Start/End: Original strand, 29307317 - 29307433
Alignment:
Q  243 caaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatat 340  Q
    ||||||||||||| ||||||||||||||| | |||||||| || |||| |||  |||||||||||  ||||  |||||| ||  |||||||||||||||     
T  29307317 caaattgaatgcactttgcatttaattttcctttggaaaa-ataattt-tttagaaaaacataattaaatatgataaaagttagtcttttttgcttataa 29307414  T
Q  341 tttgagacaaagaatataa 359  Q
    ||||| |||||||| ||||    
T  29307415 tttgaaacaaagaaaataa 29307433  T

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Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 35275346 - 35275415
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat 307  Q
    |||||| |||||||||| | ||||||||||||||    ||| |||||||||||| ||||||||||||||||    
T  35275346 ggagaaaaaattgaatgtagtttgcatttaatttctttttgaaaaagatgattt-tttgaaaaaacataat 35275415  T

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Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 38130328 - 38130374
Alignment:
Q  308 aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    ||||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  38130328 aatagaataaaaatttatcttttttacttatattttgggacaaagaa 38130374  T

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Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 41625689 - 41625770
Alignment:
Q  275 ttggaaaagatgatttgtttgaaaaaac-ataat-aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||||| |||  |||||| | ||| ||||| ||||||||| |||||||||| ||| ||||||||| ||||||    
T  41625689 ttggaaaagatgatttttttttaaaaacaagaataaatagaataaaaatttatcttttttgattacattttgagataaagaa 41625770  T

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Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 842753 - 842793
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||| || ||||||||||||||||||||| |||||||||    
T  842753 ataaaagtttatcttttttgcttatattttgggacaaagaa 842793  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 42273632 - 42273552
Alignment:
Q  275 ttggaaaagatgatttgtttgaaaaaacataat-aatagcataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||||||||||||| ||| |||||  | | | ||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  42273632 ttggaaaagatgattttttttaaaaacaagattaaataggataaaagtttgtcttttttgcttatattttgggacaaagaa 42273552  T

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Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 42273682 - 42273654
Alignment:
Q  244 aaattgaatgcaatttgcatttaatttta 272  Q
    |||||||||||||||||||||||||||||    
T  42273682 aaattgaatgcaatttgcatttaatttta 42273654  T

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Target: scaffold0495 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 4666 - 4547
Alignment:
Q  237 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgatcttttttgctt 336  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  4666 ggagaacacattgaatgcaatttgcatttaattttatattggaaa-gatgatttgtttggaaaaacataataatagcataaaagttggtcttttttgctt 4568  T
Q  337 atattttgagacaaagaatat 357  Q
    |||||||||||||||||||||    
T  4567 atattttgagacaaagaatat 4547  T

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Target: scaffold0495; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 4834 - 4720
Alignment:
Q  68 atactccctccgtcctaatttataagcnnnnnnncactaattcacatttattaagaaaactaacatttagtgatttgaggtataactttttgtgttctcc 167  Q
    |||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  4834 atactccctccgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcc 4736  T
Q  168 ttgaaataagattcat 183  Q
    |||||||||| |||||    
T  4735 ttgaaataagtttcat 4720  T

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Target: scaffold0330 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 339
Target Start/End: Complemental strand, 3204 - 3105
Alignment:
Q  241 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttat 338  Q
    ||||||||||||||| ||||||| ||||||| | ||||||||||| |||| ||||||||||||||||  ||||  |||||| ||||||||||||||||||    
T  3204 aacaaattgaatgcactttgcatataattttgctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttgatcttttttgcttat 3106  T

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Target: scaffold0774 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 3615 - 3655
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||| || ||||||||||||||||||||| |||||||||    
T  3615 ataaaagtttatcttttttgcttatattttgggacaaagaa 3655  T

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Target: scaffold0565 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 359
Target Start/End: Original strand, 6003 - 6116
Alignment:
Q  244 aaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataat--aatagcataaaaattgatcttttttgcttatatt 341  Q
    |||||||||||| |||||||||||||||   ||| ||||||||   | ||||||||||||||||  ||||  |||||| ||| | |||||||||||||      
T  6003 aaattgaatgcactttgcatttaattttcttttgaaaaagatg---tttttgaaaaaacataattaaatatgataaaagttggt-ttttttgcttataac 6098  T
Q  342 ttgagacaaagaatataa 359  Q
    ||| ||||||||| ||||    
T  6099 ttgggacaaagaaaataa 6116  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 154835 - 154795
Alignment:
Q  314 ataaaaattgatcttttttgcttatattttgagacaaagaa 354  Q
    |||||| || ||||||||| |||||||||||||||||||||    
T  154835 ataaaagtttatcttttttacttatattttgagacaaagaa 154795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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