View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5581-Insertion-8 (Length: 137)
Name: NF5581-Insertion-8
Description: NF5581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5581-Insertion-8 |
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Alignment Details
Target: chr2 (Bit Score: 95; Significance: 7e-47; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 16970660 - 16970779
Alignment:
| Q |
8 |
tgtgacgagtctataaccttaccgttgccaaaaaggcattaaatccaaaatggtcccagcagaagcagaagcagaagggcaagattttctgaatttccca |
107 |
Q |
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| T |
16970660 |
tgtgacgagtctataaccttaccgttgccaaaaaggcattaaatccaaaatggtcctagaagaagcagaagca------caagattttctgaatttccca |
16970753 |
T |
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| Q |
108 |
acttttcacatcaactctcagtaaga |
133 |
Q |
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| T |
16970754 |
acttttcacatcaactctcagtaaga |
16970779 |
T |
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