View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5581-Insertion-9 (Length: 251)
Name: NF5581-Insertion-9
Description: NF5581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5581-Insertion-9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 115 - 251
Target Start/End: Complemental strand, 7000762 - 7000626
Alignment:
| Q |
115 |
aaacaagatttaagttgagaaacatttgtagtactttattatattgattgatagagaagtagagaacatacgtgtatgtaaagccaaaccaaaggtggcg |
214 |
Q |
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| T |
7000762 |
aaacaagatttaagttgagaaacatttgtagtactttattatattgattgatagagaagtagagaacatacgtgtatgtaaagccaaaccaaaggtggcg |
7000663 |
T |
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| Q |
215 |
caaatggtatgattttttgcacaccacacgcaacatt |
251 |
Q |
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| T |
7000662 |
caaatggtatgattttttgcacaccacacgcaacatt |
7000626 |
T |
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