View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5581_high_15 (Length: 209)

Name: NF5581_high_15
Description: NF5581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5581_high_15
NF5581_high_15
[»] chr2 (1 HSPs)
chr2 (158-188)||(16586448-16586478)


Alignment Details
Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 188
Target Start/End: Original strand, 16586448 - 16586478
Alignment:
158 gacgtggggactataaatcacacctccctat 188  Q
    |||||||||||||||||||||||||||||||    
16586448 gacgtggggactataaatcacacctccctat 16586478  T

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