View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5582_low_9 (Length: 356)

Name: NF5582_low_9
Description: NF5582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5582_low_9
NF5582_low_9
[»] chr3 (42 HSPs)
chr3 (15-337)||(1121238-1121548)
chr3 (173-298)||(53996618-53996743)
chr3 (166-298)||(34420696-34420828)
chr3 (171-288)||(26573105-26573222)
chr3 (171-288)||(45620890-45621008)
chr3 (179-321)||(8247717-8247861)
chr3 (198-321)||(13628820-13628944)
chr3 (179-321)||(46421065-46421209)
chr3 (179-289)||(40272873-40272984)
chr3 (212-298)||(54374398-54374484)
chr3 (173-321)||(25944449-25944597)
chr3 (174-321)||(45948868-45949017)
chr3 (179-288)||(13730666-13730776)
chr3 (179-289)||(22609752-22609861)
chr3 (170-256)||(35417893-35417979)
chr3 (193-321)||(29366750-29366879)
chr3 (170-243)||(53062015-53062088)
chr3 (212-321)||(516428-516539)
chr3 (198-290)||(5173781-5173872)
chr3 (212-284)||(39212009-39212081)
chr3 (212-298)||(1217109-1217192)
chr3 (170-289)||(29106526-29106645)
chr3 (179-256)||(10870045-10870123)
chr3 (216-286)||(54032623-54032693)
chr3 (193-289)||(22122978-22123072)
chr3 (212-269)||(30928228-30928285)
chr3 (166-275)||(44403631-44403740)
chr3 (179-289)||(7696948-7697057)
chr3 (193-289)||(26869707-26869802)
chr3 (198-289)||(7942995-7943086)
chr3 (214-289)||(12914096-12914171)
chr3 (187-286)||(19730996-19731095)
chr3 (226-288)||(14986990-14987052)
chr3 (212-290)||(45139538-45139616)
chr3 (221-290)||(10795485-10795554)
chr3 (179-255)||(52926305-52926382)
chr3 (193-289)||(4495725-4495821)
chr3 (226-298)||(55401209-55401281)
chr3 (193-288)||(9607203-9607298)
chr3 (212-298)||(33926102-33926187)
chr3 (193-289)||(39203516-39203610)
chr3 (226-289)||(31592882-31592943)
[»] chr1 (51 HSPs)
chr1 (170-298)||(2435839-2435967)
chr1 (175-289)||(18724606-18724720)
chr1 (170-291)||(17470405-17470526)
chr1 (170-293)||(22327077-22327200)
chr1 (173-293)||(50811920-50812041)
chr1 (170-262)||(2435981-2436073)
chr1 (198-290)||(9939467-9939559)
chr1 (213-321)||(45264429-45264537)
chr1 (179-289)||(14617024-14617135)
chr1 (180-289)||(20036208-20036318)
chr1 (171-289)||(44485170-44485288)
chr1 (193-290)||(27201648-27201745)
chr1 (212-288)||(10668245-10668321)
chr1 (172-293)||(15511206-15511329)
chr1 (179-321)||(18944629-18944773)
chr1 (193-289)||(46248014-46248110)
chr1 (193-288)||(20004154-20004249)
chr1 (179-289)||(32632618-32632728)
chr1 (176-298)||(27136704-27136826)
chr1 (179-288)||(30395790-30395900)
chr1 (170-255)||(25554817-25554902)
chr1 (193-286)||(46991805-46991898)
chr1 (193-321)||(23768350-23768477)
chr1 (179-285)||(34725163-34725268)
chr1 (164-288)||(50760288-50760412)
chr1 (170-289)||(34679280-34679399)
chr1 (171-293)||(19701549-19701671)
chr1 (188-290)||(35117828-35117930)
chr1 (193-286)||(6925101-6925194)
chr1 (170-243)||(6983916-6983989)
chr1 (180-289)||(11596501-11596609)
chr1 (193-289)||(38478343-38478437)
chr1 (213-289)||(25468324-25468400)
chr1 (193-289)||(41319867-41319963)
chr1 (170-241)||(10378834-10378905)
chr1 (212-290)||(35005143-35005221)
chr1 (213-289)||(12126898-12126972)
chr1 (179-243)||(25290149-25290214)
chr1 (193-289)||(4430087-4430183)
chr1 (212-256)||(31272468-31272512)
chr1 (171-243)||(52910196-52910268)
chr1 (166-256)||(22930161-22930252)
chr1 (180-298)||(33222971-33223089)
chr1 (177-252)||(35019215-35019290)
chr1 (181-243)||(47214499-47214562)
chr1 (170-244)||(6358112-6358186)
chr1 (173-243)||(23371105-23371175)
chr1 (212-289)||(35253248-35253323)
chr1 (179-290)||(19932815-19932924)
chr1 (264-321)||(46859138-46859195)
chr1 (179-289)||(45812598-45812707)
[»] chr8 (36 HSPs)
chr8 (169-290)||(44781566-44781687)
chr8 (170-298)||(42083751-42083879)
chr8 (170-298)||(35105884-35106006)
chr8 (169-298)||(14018021-14018150)
chr8 (179-289)||(12670311-12670420)
chr8 (179-289)||(30454158-30454267)
chr8 (193-289)||(36720774-36720870)
chr8 (170-298)||(44742571-44742699)
chr8 (179-289)||(29521746-29521857)
chr8 (179-288)||(7136591-7136701)
chr8 (179-288)||(39461058-39461168)
chr8 (193-289)||(2626497-2626596)
chr8 (193-286)||(28817690-28817783)
chr8 (216-289)||(44530150-44530223)
chr8 (193-321)||(20284099-20284230)
chr8 (176-276)||(30962847-30962947)
chr8 (198-289)||(18164821-18164911)
chr8 (179-288)||(20869560-20869668)
chr8 (193-288)||(25250500-25250595)
chr8 (198-289)||(31457156-31457246)
chr8 (180-289)||(17823540-17823650)
chr8 (193-321)||(21070727-21070859)
chr8 (186-288)||(22598128-22598230)
chr8 (216-289)||(8897825-8897898)
chr8 (212-289)||(36918121-36918198)
chr8 (216-288)||(6760823-6760895)
chr8 (176-288)||(8484000-8484112)
chr8 (193-289)||(13160680-13160775)
chr8 (178-256)||(28407378-28407457)
chr8 (179-289)||(35261642-35261753)
chr8 (217-289)||(12625891-12625964)
chr8 (216-288)||(26954133-26954206)
chr8 (216-289)||(45071266-45071338)
chr8 (221-289)||(5135350-5135418)
chr8 (214-289)||(389642-389719)
chr8 (193-242)||(24245429-24245478)
[»] chr4 (54 HSPs)
chr4 (170-298)||(487187-487315)
chr4 (171-288)||(19027804-19027921)
chr4 (179-288)||(16408665-16408775)
chr4 (168-298)||(54175017-54175146)
chr4 (170-269)||(54966976-54967075)
chr4 (178-256)||(54640433-54640511)
chr4 (212-293)||(7038050-7038130)
chr4 (170-289)||(17043455-17043571)
chr4 (170-295)||(23580263-23580388)
chr4 (216-321)||(40915830-40915933)
chr4 (179-289)||(20224947-20225056)
chr4 (171-298)||(20908689-20908817)
chr4 (197-289)||(41018855-41018946)
chr4 (179-289)||(48598886-48598995)
chr4 (179-289)||(5648222-5648332)
chr4 (179-289)||(6430687-6430797)
chr4 (181-256)||(42164242-42164317)
chr4 (179-288)||(10660367-10660477)
chr4 (179-288)||(10874512-10874622)
chr4 (179-288)||(21646927-21647037)
chr4 (212-298)||(44357217-44357303)
chr4 (170-287)||(51420528-51420646)
chr4 (193-274)||(43035226-43035307)
chr4 (170-256)||(30496414-30496501)
chr4 (179-289)||(30639343-30639453)
chr4 (214-289)||(47443956-47444031)
chr4 (170-256)||(49938684-49938771)
chr4 (181-289)||(11054209-11054316)
chr4 (172-290)||(25343144-25343262)
chr4 (232-321)||(20639688-20639777)
chr4 (178-298)||(30581518-30581639)
chr4 (193-289)||(47528591-47528685)
chr4 (197-289)||(7385537-7385629)
chr4 (179-274)||(17315375-17315470)
chr4 (212-256)||(25463119-25463163)
chr4 (170-242)||(50856344-50856416)
chr4 (179-289)||(5306725-5306835)
chr4 (184-263)||(30690270-30690349)
chr4 (212-289)||(9832374-9832449)
chr4 (227-289)||(9987895-9987957)
chr4 (179-288)||(16911525-16911635)
chr4 (212-289)||(10380004-10380080)
chr4 (212-269)||(37494848-37494905)
chr4 (170-252)||(32629366-32629445)
chr4 (169-289)||(47441591-47441711)
chr4 (176-255)||(12257688-12257767)
chr4 (239-321)||(12711479-12711561)
chr4 (227-298)||(21489099-21489170)
chr4 (213-256)||(39077888-39077931)
chr4 (212-289)||(29207959-29208034)
chr4 (177-298)||(49938491-49938612)
chr4 (167-252)||(6966044-6966129)
chr4 (169-298)||(39029113-39029242)
chr4 (193-290)||(44363192-44363289)
[»] chr7 (48 HSPs)
chr7 (170-289)||(28362206-28362325)
chr7 (173-291)||(7644914-7645032)
chr7 (171-289)||(23419735-23419853)
chr7 (181-289)||(19426950-19427059)
chr7 (193-289)||(11617649-11617745)
chr7 (171-289)||(48123545-48123663)
chr7 (212-298)||(29907416-29907502)
chr7 (179-288)||(46354157-46354267)
chr7 (216-289)||(7879639-7879712)
chr7 (172-289)||(19265772-19265888)
chr7 (214-286)||(18512517-18512588)
chr7 (198-289)||(42391161-42391250)
chr7 (170-289)||(6736845-6736963)
chr7 (179-289)||(42798632-42798743)
chr7 (193-289)||(10693134-10693228)
chr7 (179-289)||(48735183-48735293)
chr7 (179-289)||(2541080-2541192)
chr7 (171-290)||(12473259-12473379)
chr7 (179-289)||(21172070-21172179)
chr7 (193-289)||(33871971-33872066)
chr7 (216-288)||(47716460-47716532)
chr7 (193-288)||(42805502-42805597)
chr7 (193-288)||(43557450-43557545)
chr7 (171-241)||(13805058-13805128)
chr7 (171-289)||(19266406-19266524)
chr7 (210-256)||(31591201-31591247)
chr7 (170-256)||(32233228-32233314)
chr7 (168-293)||(16341231-16341356)
chr7 (193-290)||(22699030-22699127)
chr7 (213-290)||(35203437-35203514)
chr7 (193-269)||(7193063-7193139)
chr7 (198-289)||(11741778-11741867)
chr7 (179-289)||(32758224-32758333)
chr7 (214-289)||(27629633-27629708)
chr7 (179-256)||(47077947-47078025)
chr7 (184-289)||(14099067-14099172)
chr7 (184-289)||(14409084-14409189)
chr7 (179-286)||(35334880-35334986)
chr7 (226-289)||(2662996-2663057)
chr7 (169-320)||(42101915-42102066)
chr7 (219-289)||(15108458-15108527)
chr7 (179-252)||(42495933-42496007)
chr7 (175-256)||(3469273-3469354)
chr7 (193-290)||(5180217-5180314)
chr7 (216-289)||(38262257-38262330)
chr7 (193-289)||(42476851-42476945)
chr7 (198-289)||(8149006-8149098)
chr7 (179-290)||(14732883-14732994)
[»] chr6 (22 HSPs)
chr6 (169-293)||(7947429-7947553)
chr6 (198-321)||(29355885-29356009)
chr6 (180-321)||(12221945-12222088)
chr6 (170-289)||(13905040-13905159)
chr6 (179-289)||(3815138-3815249)
chr6 (179-289)||(1346927-1347036)
chr6 (179-289)||(1354818-1354927)
chr6 (193-321)||(9161101-9161229)
chr6 (212-256)||(2166506-2166550)
chr6 (212-256)||(2178139-2178183)
chr6 (215-290)||(14553511-14553586)
chr6 (168-254)||(12889379-12889465)
chr6 (179-283)||(8409206-8409311)
chr6 (212-269)||(17432337-17432394)
chr6 (216-288)||(6024234-6024306)
chr6 (179-265)||(14975165-14975252)
chr6 (198-285)||(20400650-20400737)
chr6 (248-293)||(24751131-24751176)
chr6 (220-289)||(33138838-33138907)
chr6 (216-256)||(22967172-22967212)
chr6 (216-256)||(23821181-23821221)
chr6 (193-289)||(32728217-32728313)
[»] chr5 (32 HSPs)
chr5 (170-298)||(208980-209107)
chr5 (188-317)||(28516467-28516596)
chr5 (179-275)||(23974744-23974840)
chr5 (179-321)||(38879544-38879688)
chr5 (179-289)||(24448853-24448964)
chr5 (170-255)||(39301078-39301163)
chr5 (179-289)||(35710276-35710385)
chr5 (179-289)||(41014282-41014392)
chr5 (179-288)||(4619168-4619278)
chr5 (212-290)||(42924894-42924972)
chr5 (179-290)||(43334165-43334278)
chr5 (193-288)||(27328730-27328825)
chr5 (175-289)||(19143004-19143117)
chr5 (212-290)||(22187282-22187360)
chr5 (212-289)||(32703421-32703496)
chr5 (179-289)||(8170045-8170154)
chr5 (169-245)||(10634251-10634327)
chr5 (193-256)||(37024648-37024711)
chr5 (170-241)||(39079875-39079946)
chr5 (218-289)||(43574609-43574680)
chr5 (179-256)||(1565394-1565472)
chr5 (235-321)||(29334415-29334501)
chr5 (216-289)||(1405188-1405261)
chr5 (219-288)||(41425952-41426021)
chr5 (181-321)||(12006358-12006500)
chr5 (226-288)||(13801831-13801893)
chr5 (234-288)||(20135623-20135677)
chr5 (199-256)||(1850624-1850681)
chr5 (170-321)||(2838732-2838883)
chr5 (212-269)||(22025540-22025597)
chr5 (171-288)||(24903758-24903875)
chr5 (212-289)||(34074623-34074700)
[»] chr2 (36 HSPs)
chr2 (170-289)||(32781349-32781468)
chr2 (170-290)||(10543652-10543773)
chr2 (168-294)||(29419941-29420071)
chr2 (171-299)||(44521425-44521552)
chr2 (175-289)||(5450245-5450360)
chr2 (179-289)||(12023980-12024090)
chr2 (193-290)||(24200685-24200782)
chr2 (172-288)||(4516413-4516529)
chr2 (179-321)||(14530281-14530425)
chr2 (179-289)||(8455377-8455488)
chr2 (179-289)||(11514399-11514510)
chr2 (173-289)||(99326-99440)
chr2 (193-289)||(17667980-17668076)
chr2 (170-321)||(15296436-15296589)
chr2 (170-255)||(17380331-17380416)
chr2 (216-289)||(17623565-17623638)
chr2 (193-321)||(17896237-17896365)
chr2 (193-289)||(23397744-23397838)
chr2 (212-288)||(19614989-19615065)
chr2 (212-289)||(10546159-10546237)
chr2 (191-256)||(44604830-44604895)
chr2 (198-289)||(21779322-21779411)
chr2 (188-276)||(33795258-33795346)
chr2 (193-284)||(5841006-5841097)
chr2 (214-289)||(12315713-12315787)
chr2 (214-289)||(19977775-19977850)
chr2 (173-288)||(23145760-23145874)
chr2 (173-288)||(23557550-23557664)
chr2 (193-288)||(40416933-40417028)
chr2 (216-254)||(13245182-13245220)
chr2 (170-289)||(31821404-31821518)
chr2 (174-243)||(35017776-35017846)
chr2 (193-290)||(7214512-7214609)
chr2 (179-289)||(9671143-9671253)
chr2 (216-289)||(14444730-14444802)
chr2 (193-289)||(25249799-25249894)
[»] scaffold0049 (1 HSPs)
scaffold0049 (212-290)||(58974-59052)
[»] scaffold0258 (1 HSPs)
scaffold0258 (179-321)||(13054-13195)
[»] scaffold0187 (2 HSPs)
scaffold0187 (193-289)||(10111-10205)
scaffold0187 (193-289)||(20439-20533)
[»] scaffold0057 (2 HSPs)
scaffold0057 (216-289)||(46832-46905)
scaffold0057 (168-238)||(46995-47065)
[»] scaffold0311 (1 HSPs)
scaffold0311 (193-289)||(10788-10884)
[»] scaffold0254 (1 HSPs)
scaffold0254 (212-256)||(4154-4198)
[»] scaffold0168 (1 HSPs)
scaffold0168 (179-289)||(30542-30651)
[»] scaffold0223 (1 HSPs)
scaffold0223 (212-289)||(11128-11203)
[»] scaffold1176 (1 HSPs)
scaffold1176 (193-256)||(1679-1742)
[»] scaffold0116 (1 HSPs)
scaffold0116 (193-256)||(8869-8932)


Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 15 - 337
Target Start/End: Complemental strand, 1121548 - 1121238
Alignment:
Q  15 atcataggttttattttttaggttagaaagcagattttgaattaactataaagctctatataaagctctatagggagagctttaccaccaattttgggtc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||| ||||    
T  1121548 atcataggttttattttttaggttagaaagcagattttgaattaactataaagctctata------------gggagagctttaccaccaattttaggtc 1121461  T
Q  115 ttacccgactcgagaaattagtctctacagttgtgtgcaaggaggatatataataaagggggagccttggcgcaacgctaaatttgttgtccggtggctg 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1121460 ttacccgactcgagaaattagtctctacagttgtgtgcaaggaggatatataataaagggggagccttggcgcaacactaaatttgttgtccggtggctg 1121361  T
Q  215 aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccct 314  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  1121360 aaaggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaatacaccaaaatggcgggagcctttctcagaccct 1121261  T
Q  315 gcgtatggttctcgagtacatgg 337  Q
    |||||||||||||||||||||||    
T  1121260 gcgtatggttctcgagtacatgg 1121238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 53996743 - 53996618
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 272  Q
    ||||||||||||||| ||| |||||||||||||   || ||||||||||||||||||||||| |||||||||| |||||||||| ||| | |||||| ||    
T  53996743 ggggagccttggcgctacggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggct 53996644  T
Q  273 gcgtccaatacaccaaaatggcggga 298  Q
    || | |||||||||||||||| ||||    
T  53996643 gcttacaatacaccaaaatggtggga 53996618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 298
Target Start/End: Complemental strand, 34420828 - 34420696
Alignment:
Q  166 aataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 265  Q
    ||||||||||| |||||||||||||  |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||    
T  34420828 aataaagggggggccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaggg 34420729  T
Q  266 taagactgcgtccaatacaccaaaatggcggga 298  Q
    |||| |||||| | |||||||||||||| ||||    
T  34420728 taaggctgcgtaccatacaccaaaatggtggga 34420696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 26573105 - 26573222
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    ||||||| ||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||||| ||| | ||||||     
T  26573105 agggggacccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaagg 26573204  T
Q  271 ctgcgtccaatacaccaa 288  Q
    |||||| |||||||||||    
T  26573205 ctgcgtacaatacaccaa 26573222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 45621008 - 45620890
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaag 269  Q
    ||||||||||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||| ||||||||| | |||||||| || ||| | ||||||    
T  45621008 agggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaag 45620909  T
Q  270 actgcgtccaatacaccaa 288  Q
     |||||| |||||||||||    
T  45620908 gctgcgtacaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 8247861 - 8247717
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  |||||     
T  8247861 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgta 8247762  T
Q  278 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||||||| ||||| |||| || ||| | |||||||||||||    
T  8247761 caatacaccaataatggtgggactccttcccggaccctgcgtatg 8247717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 13628944 - 13628820
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aatggcgg 296  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||||||| | |||||| |||||| ||||||||||| ||||| ||    
T  13628944 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 13628845  T
Q  297 gagtctttctcagaccctgcgtatg 321  Q
    ||  | ||| | |||||||||||||    
T  13628844 gaccccttcccggaccctgcgtatg 13628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 46421209 - 46421065
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  46421209 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 46421110  T
Q  278 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  46421109 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 46421065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 40272984 - 40272873
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||| | |||||||||||||||||||| |||||||||| ||| | |||||| ||||||     
T  40272984 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 40272885  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  40272884 caatacaccaaa 40272873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 54374484 - 54374398
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 298  Q
    ||||||||||||  ||||||||| |||||||||| |||||||||| ||||| |||||| |||||| |||| ||||||||||| ||||    
T  54374484 ctgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtggga 54374398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 321
Target Start/End: Original strand, 25944449 - 25944597
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 272  Q
    ||||||||||||||||||  |||| ||||||||  ||| ||||||||||| | |||||||||||||||||  | ||| |||||| |||   || ||| ||    
T  25944449 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggct 25944548  T
Q  273 gcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    | || |||||||||||||||| ||||  | ||| | |||||||||||||    
T  25944549 gagtacaatacaccaaaatggtgggaccccttccctgaccctgcgtatg 25944597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 45949017 - 45948868
Alignment:
Q  174 gggagccttggcgcaacgctaaatttgttgtccggtggctgaa---aggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    |||||||||||||||||| | || ||||| ||  ||| |||||   |||||||| |||||| ||||||||||||| |||||||||| ||||| ||||||     
T  45949017 gggagccttggcgcaacggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaagg 45948918  T
Q  271 ctgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    |||| | ||||||||| || ||| ||||  | ||||| |||||||||||||    
T  45948917 ctgcatacaatacacc-aattggtgggaccccttctcggaccctgcgtatg 45948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 13730776 - 13730666
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| ||     
T  13730776 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgta 13730677  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  13730676 caatacaccaa 13730666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 22609752 - 22609861
Alignment:
Q  179 ccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 278  Q
    ||||||||||||| |||| ||||||||  ||| ||| ||||| ||| ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| |    
T  22609752 ccttggcgcaacggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaa-aaacagggtaaggctgcgtac 22609850  T
Q  279 aatacaccaaa 289  Q
    |||||||||||    
T  22609851 aatacaccaaa 22609861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 35417893 - 35417979
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||||||||||||||||| |||| ||||| ||  ||| |||| |||||||| |||||| ||||||||||| | ||||||||||    
T  35417893 aagggggagccttggcgcaacggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaa 35417979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 29366879 - 29366750
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aat 291  Q
    |||| ||||||||  ||| || |||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| |||||| ||||||||||| |||    
T  29366879 taaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataat 29366780  T
Q  292 ggcgggagtctttctcagaccctgcgtatg 321  Q
    || ||||  | ||| | |||||||||||||    
T  29366779 ggtgggaccccttcccggaccctgcgtatg 29366750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 53062015 - 53062088
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 243  Q
    |||||||||  |||||||| || |||| ||||||||  ||| ||||||||||||||||||||||||||||||||    
T  53062015 aagggggaggattggcgcatcggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaaca 53062088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 516428 - 516539
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc--aaaatggcgggagtctttctcag 309  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||  ||||| |||  ||||||||||||  | ||| | |    
T  516428 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccccg 516527  T
Q  310 accctgcgtatg 321  Q
    ||||||||||||    
T  516528 accctgcgtatg 516539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 290
Target Start/End: Complemental strand, 5173872 - 5173781
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| ||| || |||||  ||| | |||||||||||||    
T  5173872 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa-aaacaaagtaaggttgcatgcaatacaccaaaa 5173781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 39212009 - 39212081
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaataca 284  Q
    |||||| |||||| |||||||||||||||| ||| ||||||||||  || ||||||||||||||| |||||||    
T  39212009 ctgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 1217109 - 1217192
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 298  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||| |||||||||||    
T  1217109 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacacc-aaatggcggga 1217192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 29106526 - 29106645
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||||| ||||||||||| ||||  |||||||  |||||| |||| ||||| || |||||| || ||||||| |||||||||| ||||| | ||||    
T  29106526 aagggggagctttggcgcaacggtaaaaatgttgtcatgtggctcaaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataag 29106625  T
Q  270 actgcgtccaatacaccaaa 289  Q
      | ||| ||||||||||||    
T  29106626 gttacgtacaatacaccaaa 29106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 10870123 - 10870045
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||    
T  10870123 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 10870045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 54032693 - 54032623
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 286  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| |||| | |||||||||    
T  54032693 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacacc 54032623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 22123072 - 22122978
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||||||  ||| |||||||||| || ||||||||||||||||||   |||||||||  ||| | |||||| |||||| ||||||||||||    
T  22123072 taaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 22122978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 30928285 - 30928228
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||    
T  30928285 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaag 30928228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 44403740 - 44403631
Alignment:
Q  166 aataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 265  Q
    ||||||||||||||||||| |||||| |||| || |||||  |||||| |||||||||  ||| ||||||||| || | | |||||||||| | | ||||    
T  44403740 aataaagggggagccttggtgcaacggtaaagttattgtcacgtggctaaaaggtcacaggttaaagtcctgggaatagcctcttgtgtaaaagacaagg 44403641  T
Q  266 taagactgcg 275  Q
    |||| |||||    
T  44403640 taaggctgcg 44403631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 7697057 - 7696948
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| ||||||||||||||||||   |||||||||  ||| | |||||| ||||||     
T  7697057 ccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgta--aaacagggtaaggctgcgta 7696960  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  7696959 caatacaccaaa 7696948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 26869707 - 26869802
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||| |||||| ||| | |||||| |||||| ||||||||||||    
T  26869707 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 26869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 289
Target Start/End: Original strand, 7942995 - 7943086
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||  ||| ||| |||||||||  ||||||||||||||||| | |||||| ||| ||| | ||||||||||||| ||||||| ||||    
T  7942995 ttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaa 7943086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 12914171 - 12914096
Alignment:
Q  214 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||  |||||||||||||||||| | |||||||||| ||| | |||||| | |||| ||||||||||||    
T  12914171 gaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaa 12914096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 19730996 - 19731095
Alignment:
Q  187 caacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 286  Q
    ||||| |||||||||||||  |||  ||||||||||||  | ||||||||||||| | | |||||||||| ||| ||||||||  ||||| |||||||||    
T  19730996 caacggtaaatttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacc 19731095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 14986990 - 14987052
Alignment:
Q  226 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||    
T  14986990 gttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 14987052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 45139616 - 45139538
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    ||||||||||||| ||||||||  |||||||||| |||||||||| | | | |||||| |||| | |||||||||||||    
T  45139616 ctgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaa 45139538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 10795554 - 10795485
Alignment:
Q  221 cacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||| |||||||||||||||||| | |||||||||| | | | |||||| |||||| |||||||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa 10795485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 52926382 - 52926305
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 255  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||    
T  52926382 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 4495821 - 4495725
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||| ||| | | | |||||||| ||| | |||||| |||||| ||||||||||||    
T  4495821 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 4495725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 55401209 - 55401281
Alignment:
Q  226 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 298  Q
    |||||||||||| ||||| | |||||||||| ||| | | |||||||||||  ||||||||||||||| ||||    
T  55401209 gttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtggga 55401281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 9607203 - 9607298
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||| ||||||||  ||| |||||||||||   |||||||||||||||||| | ||||| |||| ||| | |||||| ||||||  ||||||||||    
T  9607203 taaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaa 9607298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 33926102 - 33926187
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 298  Q
    ||||||||||| | |||||||||||||||| | | |||||||||| ||| | |||||| ||| || |||||||||| ||||| ||||    
T  33926102 ctgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaa-aaacagggtaaggctgtgtacaatacaccataatggtggga 33926187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 39203516 - 39203610
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||  ||||||||||| |||||| | |||||||||  ||| | ||||||  ||||| ||||||||||||    
T  39203516 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgta--aaacagggtaaggttgcgtacaatacaccaaa 39203610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 31592882 - 31592943
Alignment:
Q  226 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  31592882 gttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 31592943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 298
Target Start/End: Complemental strand, 2435967 - 2435839
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||| |||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||| | ||||| ||||||    
T  2435967 aagggggggccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaag 2435868  T
Q  270 actgcgtccaatacaccaaaatggcggga 298  Q
     |||||| |||||||||||||||| ||||    
T  2435867 cctgcgtacaatacaccaaaatggtggga 2435839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 18724720 - 18724606
Alignment:
Q  175 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 274  Q
    |||| |||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||     
T  18724720 ggagacttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 18724621  T
Q  275 gtccaatacaccaaa 289  Q
    || ||||||||||||    
T  18724620 gtacaatacaccaaa 18724606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 17470526 - 17470405
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||||||||| |||||| |||| ||||||||  ||| ||||| ||||| | ||||||||||| |||||| | |||||||||| ||| | ||||||    
T  17470526 aagggggagccttggtgcaacggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaag 17470427  T
Q  270 actgcgtccaatacaccaaaat 291  Q
     |||||| ||||||||||||||    
T  17470426 gctgcgtacaatacaccaaaat 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 22327077 - 22327200
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||| |||||||||||||||||  ||| ||||||||  ||| |||||||||| || |||||||||||||||||||| |||||||||| ||| | ||||||    
T  22327077 aaggtggagccttggcgcaacggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 22327176  T
Q  270 actgcgtccaatacaccaaaatgg 293  Q
     ||| || | || |||||||||||    
T  22327177 gctgtgtacgatgcaccaaaatgg 22327200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 50811920 - 50812041
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagac 271  Q
    ||||||||||||||||||| |||| ||||||||  ||| |||||||||||||   ||| |||||||||||| |||||||||| || ||| | ||||||      
T  50811920 ggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggt 50812019  T
Q  272 tgcgtccaatacaccaaaatgg 293  Q
    ||||| ||||||||||||||||    
T  50812020 tgcgtacaatacaccaaaatgg 50812041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 2436073 - 2435981
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaata 262  Q
    ||||||| ||||||| |||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||||| || ||||||| |||||    
T  2436073 aagggggggccttggtgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaata 2435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 198 - 290
Target Start/End: Original strand, 9939467 - 9939559
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| | ||||||  ||||| |||||||||||||    
T  9939467 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaa 9939559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 45264537 - 45264429
Alignment:
Q  213 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagacc 312  Q
    ||||||||||| ||||||||||||||||||||| ||||||| || ||| |  ||||| ||| || |||||||||||||||| ||||  | ||||||||||    
T  45264537 tgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttctcagacc 45264438  T
Q  313 ctgcgtatg 321  Q
    |||| ||||    
T  45264437 ctgcatatg 45264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 14617024 - 14617135
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||  || ||||||||  |||||     
T  14617024 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgta 14617123  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  14617124 caatacaccaaa 14617135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 20036208 - 20036318
Alignment:
Q  180 cttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtcc 278  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||||  |||||||| |||| | | ||||||| ||||| |    
T  20036208 cttggcgcaatggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttc 20036307  T
Q  279 aatacaccaaa 289  Q
    |||||||||||    
T  20036308 aatacaccaaa 20036318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 44485288 - 44485170
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    ||||||||||||||||||||  |||| ||||||||  |||  |||||||||||| |||  |||||||||||||||  ||||||||| | | | ||||||     
T  44485288 agggggagccttggcgcaacagtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaagg 44485189  T
Q  271 ctgcgtccaatacaccaaa 289  Q
    |||||| ||||||||||||    
T  44485188 ctgcgtacaatacaccaaa 44485170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 27201648 - 27201745
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||| ||||| | |||||| |||||| |||||||||||||    
T  27201648 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaa 27201745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 10668245 - 10668321
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||  ||||| |||||||||||    
T  10668245 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaa 10668321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 15511329 - 15511206
Alignment:
Q  172 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 271  Q
    |||||||||||||||||| | |||| |||||||   |||||||||||||||| | || |||||||||||||  | |||||||||| ||| | |||||| |    
T  15511329 gggggagccttggcgcaatggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggc 15511230  T
Q  272 tgcg--tccaatacaccaaaatgg 293  Q
    ||||  | ||||||||||||||||    
T  15511229 tgcggatacaatacaccaaaatgg 15511206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 18944629 - 18944773
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||| |||||||||| | |||||||||| ||| | |||||| ||||||     
T  18944629 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 18944728  T
Q  278 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  18944729 caatacaccaacaatggtgggaccccttcccggaccctgcgtatg 18944773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 46248110 - 46248014
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| |||||| |||||| ||||||||| |||||||| | |||||||||| ||| | ||||||||||||| ||||||||||||    
T  46248110 taaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 46248014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 20004249 - 20004154
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | ||| |||||| ||| |||||||| |||||| |||||||||||    
T  20004249 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa 20004154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 32632728 - 32632618
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||   || ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  32632728 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 32632630  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  32632629 caatacaccaaa 32632618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 298
Target Start/End: Complemental strand, 27136826 - 27136704
Alignment:
Q  176 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 275  Q
    |||||||||| ||||| |||| ||||||||  |||  || |||| |||| |||||||| |||| |||||| |||||||||| ||| | ||||||  ||||    
T  27136826 gagccttggcacaacggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcg 27136727  T
Q  276 tccaatacaccaaaatggcggga 298  Q
    | |||||||||||||||| ||||    
T  27136726 tacaatacaccaaaatggtggga 27136704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 30395900 - 30395790
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||  ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  30395900 ccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 30395801  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  30395800 caatacaccaa 30395790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 25554902 - 25554817
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 255  Q
    |||| ||||||||||||||| | |||| ||||||||  ||| || ||||| |||||||| |||||||||||||||| |||||||||    
T  25554902 aaggaggagccttggcgcaatggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgta 25554817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 46991805 - 46991898
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 286  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| ||| || |||||||||    
T  46991805 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacacc 46991898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 23768477 - 23768350
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatg 292  Q
    |||| ||||||||  ||| ||| ||||||||  ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| ||||||||| |||||    
T  23768477 taaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc-aaatg 23768379  T
Q  293 gcgggagtctttctcagaccctgcgtatg 321  Q
    | ||||  | ||| |||||||||||||||    
T  23768378 gtgggacaccttcccagaccctgcgtatg 23768350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 34725268 - 34725163
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  34725268 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 34725171  T
Q  278 caatacac 285  Q
    ||||||||    
T  34725170 caatacac 34725163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 50760412 - 50760288
Alignment:
Q  164 ataataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa 263  Q
    |||||||| ||||||||||||||||| | |||| | ||||||  ||| |||| |||||||| |||||||||||| ||||| | |||||||||  |||       
T  50760412 ataataaaaggggagccttggcgcaaaggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactg 50760313  T
Q  264 ggtaagactgcgtccaatacaccaa 288  Q
    |||||| ||||||  ||||||||||    
T  50760312 ggtaaggctgcgtataatacaccaa 50760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 34679399 - 34679280
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||||| ||||||||||| |||| || |||||  ||| ||||||  |||| ||||| | |||| |||||||| |||||||||| ||| | ||||||    
T  34679399 aagggggagctttggcgcaacggtaaagttattgtcatgtgactgaaatatcacatgttccattcctagaaacaacctcttgtgtaaaaaacagggtaag 34679300  T
Q  270 actgcgtccaatacaccaaa 289  Q
    ||||||| | ||||| ||||    
T  34679299 actgcgtactatacatcaaa 34679280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 19701549 - 19701671
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    ||||||||||||||||||||  |||| ||||||||  ||| |||||| |||||| ||| ||||| || ||||| | |||||||||| |||   ||||||     
T  19701549 agggggagccttggcgcaacagtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaagg 19701648  T
Q  271 ctgcgtccaatacaccaaaatgg 293  Q
     || || ||||||||||||||||    
T  19701649 atgggtacaatacaccaaaatgg 19701671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 35117930 - 35117828
Alignment:
Q  188 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacca 287  Q
    |||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||| | | |||||||||| | | | |||||| ||| || ||||||||||    
T  35117930 aacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacacca 35117831  T
Q  288 aaa 290  Q
    |||    
T  35117830 aaa 35117828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 6925101 - 6925194
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 286  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| | | |||||||||| ||||| |||||| |||||  |||||||||    
T  6925101 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacacc 6925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 6983989 - 6983916
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 243  Q
    ||||| |||||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||    
T  6983989 aagggagagccttggcgcaatggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 6983916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 11596501 - 11596609
Alignment:
Q  180 cttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 279  Q
    |||||||||||| |||| | | ||||  ||| |||||| |||||| ||||||||||| |||||||| |||||||||| ||| | |||||| ||||||  |    
T  11596501 cttggcgcaacggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaa-aaacagggtaaggctgcgtata 11596599  T
Q  280 atacaccaaa 289  Q
    ||||||||||    
T  11596600 atacaccaaa 11596609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 38478437 - 38478343
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  38478437 taaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 38478343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 25468400 - 25468324
Alignment:
Q  213 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||| | |||||||||||||||||||| |||||||||| ||  | ||||||  ||||| ||||||||||||    
T  25468400 tgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaa 25468324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 41319963 - 41319867
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||  ||| ||||||||||||||   |||||||||| ||| | |||||| |||||| ||||||||||||    
T  41319963 taaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 41319867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 10378905 - 10378834
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 241  Q
    |||||| |||||||| |||||| |||| ||||||||  ||| ||||||||| ||| ||||||||||||||||    
T  10378905 aaggggaagccttggtgcaacggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 35005143 - 35005221
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    ||||||||||||| ||||||||| || ||||| | |||||||||| ||| | |||||| |||| | |||||||||||||    
T  35005143 ctgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaa 35005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 12126972 - 12126898
Alignment:
Q  213 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||||| ||| |||| ||||||||| |||||||||||  ||| | |||||| |||||| ||||||||||||    
T  12126972 tgaaaggtcacgggtttaagttctggaaacagcttcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 12126898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 25290149 - 25290214
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 243  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||||||||||||| ||||||||    
T  25290149 ccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 4430183 - 4430087
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||| ||||||||| ||| ||||| || |||||   |||||||||| ||| | ||||||||||||| ||||||||||||    
T  4430183 taaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 4430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 31272512 - 31272468
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||    
T  31272512 ctgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaa 31272468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 52910196 - 52910268
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 243  Q
    |||||||||||||| |||||| |||| ||||||||  ||| ||||||||||||  |||||| || ||||||||    
T  52910196 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaaca 52910268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 22930252 - 22930161
Alignment:
Q  166 aataaagggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||| ||||| | |||||||||||| | |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | | ||||||||    
T  22930252 aatagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaa 22930161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 33222971 - 33223089
Alignment:
Q  180 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 278  Q
    ||||||||||| | |||| ||||||||  ||| |||||||||||||  || ||||| |||||||| | |||||||||| ||| | || |||  ||||| |    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaa-aaacagggaaaggttgcgtac 33223069  T
Q  279 aatacaccaaaatggcggga 298  Q
    ||||||||||||||| ||||    
T  33223070 aatacaccaaaatggtggga 33223089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 35019215 - 35019290
Alignment:
Q  177 agccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 252  Q
    ||||||||||||||| |||| ||||||||   || ||||||||||||   ||||||||||| ||||||| ||||||    
T  35019215 agccttggcgcaacggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgt 35019290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 47214499 - 47214562
Alignment:
Q  181 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 243  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  47214499 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 6358112 - 6358186
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaa 244  Q
    |||||||||||||||||||||| |||||||||| ||   || ||||||||||||  |||||| || ||| |||||    
T  6358112 aagggggagccttggcgcaacggtaaatttgttttcacatgactgaaaggtcacaggttcaaatcttgggaacaa 6358186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 23371105 - 23371175
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 243  Q
    ||||||||||||||||||  |||| ||||| ||   || ||||||||||||| ||||||||||| ||||||    
T  23371105 ggggagccttggcgcaacagtaaagttgttttcgcatgactgaaaggtcacgggttcaagtcctagaaaca 23371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 35253323 - 35253248
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||| ||||| ||||||||||| |||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  35253323 ctgaaagatcacgggttcaagtcctcgaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 35253248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 19932924 - 19932815
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||| | ||||||||  |||| ||||| | |||||||| ||| | |||||| ||||||     
T  19932924 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacct-ttgtgtaaaaaacagggtaaggctgcgta 19932828  T
Q  278 caatacaccaaaa 290  Q
    |||||||||||||    
T  19932827 caatacaccaaaa 19932815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 46859138 - 46859195
Alignment:
Q  264 ggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||||||||| |||||||||||||||| |||| || || |||| || ||||||||    
T  46859138 ggtaagactgcgtacaatacaccaaaatggtgggactcattttcaggccttgcgtatg 46859195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 45812707 - 45812598
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||| |||||   |||||||||  ||| | |||||| |||| |     
T  45812707 ccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgta--aaagagggtaaggctgcata 45812610  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  45812609 caatacaccaaa 45812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 44781687 - 44781566
Alignment:
Q  169 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    ||||||||||||||||||||||| |||| ||||||||  ||| ||||||| ||||| |||||||||||||||||||| |||||||||| | | | |||||    
T  44781687 aaagggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaa 44781588  T
Q  269 gactgcgtccaatacaccaaaa 290  Q
    | ||| || |||||||||||||    
T  44781587 ggctgtgtacaatacaccaaaa 44781566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 298
Target Start/End: Complemental strand, 42083879 - 42083751
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||| |||||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | | |||||||| ||||  || |||    
T  42083879 aagggagagccttggcgcaacggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaag 42083780  T
Q  270 actgcgtccaatacaccaaaatggcggga 298  Q
     |||||| || || |||||||||| ||||    
T  42083779 gctgcgtacagtataccaaaatggtggga 42083751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 298
Target Start/End: Original strand, 35105884 - 35106006
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||||||||||||||| |      ||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||| | | |  |||||    
T  35105884 aagggggagccttggcgcaaag------ttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaag 35105977  T
Q  270 actgcgtccaatacaccaaaatggcggga 298  Q
     |||||| |||||||||| ||||| ||||    
T  35105978 gctgcgtacaatacaccagaatggtggga 35106006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 298
Target Start/End: Complemental strand, 14018150 - 14018021
Alignment:
Q  169 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    ||||||||||||||||||||||| |||  ||||||||  |||  |||||||||| | ||||||||| ||||||||   |||||||||| ||| | ||| |    
T  14018150 aaagggggagccttggcgcaacggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtga 14018051  T
Q  269 gactgcgtccaatacaccaaaatggcggga 298  Q
    |||||||| |||||||| ||| ||| ||||    
T  14018050 gactgcgtacaatacactaaattggtggga 14018021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 12670420 - 12670311
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  12670420 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 12670323  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  12670322 caatacaccaaa 12670311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 30454267 - 30454158
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |||||||| ||||||     
T  30454267 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacaaggtaaggctgcgta 30454170  T
Q  278 caatacaccaaa 289  Q
    | ||||||||||    
T  30454169 cgatacaccaaa 30454158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 36720774 - 36720870
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  36720774 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 36720870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 298
Target Start/End: Complemental strand, 44742699 - 44742571
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||| |||||| |||||| |||| ||||||||  |||  || ||||||| | |||||||| ||||||||||  || ||||||| ||| | ||||||    
T  44742699 aagggggaaccttggtgcaacggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaag 44742600  T
Q  270 actgcgtccaatacaccaaaatggcggga 298  Q
     |||||| |||||||||||||||| ||||    
T  44742599 gctgcgtacaatacaccaaaatggtggga 44742571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 29521857 - 29521746
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| ||||||     
T  29521857 ccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgta 29521758  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  29521757 caatacaccaaa 29521746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 7136701 - 7136591
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||| | |||||||||||||||||||| |||||||||| ||  | |||||| ||||||     
T  7136701 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgta 7136602  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  7136601 caatacaccaa 7136591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 39461168 - 39461058
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  | | ||||||||||||| |||||||||||||||||| | |||||||||| ||| |  ||||| ||||||     
T  39461168 ccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgta 39461069  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  39461068 caatacaccaa 39461058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 2626497 - 2626596
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa---ggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||| ||   ||||||||||||| ||||||||||||    
T  2626497 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa 2626596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 28817783 - 28817690
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 286  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||    
T  28817783 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc 28817690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 44530150 - 44530223
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| ||||||||| |||||||||| |||||||||| ||| | |||||| |||||| ||||||||||||    
T  44530150 aaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 44530223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 20284230 - 20284099
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa--ggtaagactgcgtccaatacaccaa-a 289  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| ||  |||||| |||||| ||||||||||| |    
T  20284230 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaata 20284131  T
Q  290 atggcgggagtctttctcagaccctgcgtatg 321  Q
    |||| ||||  | ||| | |||||||||||||    
T  20284130 atggtgggaccccttcccggaccctgcgtatg 20284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 30962947 - 30962847
Alignment:
Q  176 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 275  Q
    ||||||||||||||||  ||| ||||||||  |||  ||||||||||||  ||||||||||||||||| | |||||||||| ||||| ||| || |||||    
T  30962947 gagccttggcgcaacggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcg 30962848  T
Q  276 t 276  Q
    |    
T  30962847 t 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 18164911 - 18164821
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  ||||| ||||||||||||    
T  18164911 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggttgcgtacaatacaccaaa 18164821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 20869668 - 20869560
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||| ||     
T  20869668 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgtgta 20869571  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  20869570 caatacaccaa 20869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 25250500 - 25250595
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||| ||||||||  ||| ||| |||||||| ||||||||||||||||||| | | |||||||| ||||| |||| | |||||| |||||||||||    
T  25250500 taaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaa 25250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 289
Target Start/End: Original strand, 31457156 - 31457246
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||  ||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||| |  ||| |||||| ||||||| ||||    
T  31457156 ttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaa-aaataggaaaaggctgcgtacaatacatcaaa 31457246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 17823540 - 17823650
Alignment:
Q  180 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 278  Q
    ||||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||  | | |||||||||||      
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaa 17823639  T
Q  279 aatacaccaaa 289  Q
    |||||||||||    
T  17823640 aatacaccaaa 17823650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 21070859 - 21070727
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa---ggtaagactgcgtccaatacaccaa- 288  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| ||   |||||| |||||| |||||||||||     
T  21070859 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaat 21070760  T
Q  289 aatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||| ||||  | ||| | |||||||||||||    
T  21070759 aatggtgggaccccttcccggaccctgcgtatg 21070727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 288
Target Start/End: Original strand, 22598128 - 22598230
Alignment:
Q  186 gcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacac 285  Q
    |||||| |||| ||||||||   || ||||||||||||| |||||| ||||||||||||| |||||||||| ||| | |||||| ||  || ||||||||    
T  22598128 gcaacggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacac 22598227  T
Q  286 caa 288  Q
    |||    
T  22598228 caa 22598230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 8897898 - 8897825
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| ||| ||||||||||||||||  ||||||||| ||||| |||||| || ||| ||||||||||||    
T  8897898 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaaa 8897825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 36918121 - 36918198
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||||| ||||||||| |||||||||| ||||| ||||| ||| | |||||| ||| || ||||||||||||    
T  36918121 ctgaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctgtgtacaatacaccaaa 36918198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 6760823 - 6760895
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| || ||| |||||||||||    
T  6760823 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaa 6760895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 288
Target Start/End: Complemental strand, 8484112 - 8484000
Alignment:
Q  176 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 275  Q
    |||||||||||||||| ||||   |||| |  ||| || ||| |||| | |||||||||||||||||||| |||||||||| ||| | || ||| |||||    
T  8484112 gagccttggcgcaacggtaaagcggttgccacgtgacttaaatgtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcg 8484013  T
Q  276 tccaatacaccaa 288  Q
    | |||||||||||    
T  8484012 tacaatacaccaa 8484000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 13160680 - 13160775
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||||| |||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  13160680 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 13160775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 28407378 - 28407457
Alignment:
Q  178 gccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | ||||||||||    
T  28407378 gccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 28407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 35261642 - 35261753
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||| ||||||||||   |||||||||| ||| | ||||||  |||||     
T  35261642 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgta 35261741  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  35261742 caatacaccaaa 35261753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 12625891 - 12625964
Alignment:
Q  217 aggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||| | |||||||||||||||||| |||||||| || ||| | ||||||||||| | ||||||||||||    
T  12625891 aggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaa 12625964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 26954133 - 26954206
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaa 288  Q
    ||||||||| |||||||||||||||||| | |||||||| || ||| | |||||| |||||| |||||||||||    
T  26954133 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaa 26954206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 45071266 - 45071338
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| |||||||| ||||||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  45071266 aaggtcacgggttcaagttctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 45071338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 5135418 - 5135350
Alignment:
Q  221 cacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || ||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaa 5135350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 389642 - 389719
Alignment:
Q  214 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt--aagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||| |||||||||||||||||| | ||||||||  || ||| | ||||||  ||||| ||||||||||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaaa 389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 24245429 - 24245478
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaac 242  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||    
T  24245429 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 298
Target Start/End: Complemental strand, 487315 - 487187
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||| |||||||||||| |||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||||| |||||||||  ||| |||||||     
T  487315 aaggaggagccttggcgtaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaa 487216  T
Q  270 actgcgtccaatacaccaaaatggcggga 298  Q
     |||||| |||||||| ||||||| ||||    
T  487215 gctgcgtacaatacactaaaatggtggga 487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 19027804 - 19027921
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    |||||||| |||| ||||| | || | ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| ||| | ||||||     
T  19027804 agggggagtcttgacgcaatggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 19027903  T
Q  271 ctgcgtccaatacaccaa 288  Q
    |||||| |||||||||||    
T  19027904 ctgcgtacaatacaccaa 19027921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 16408775 - 16408665
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||||||||||     
T  16408775 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgta 16408676  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  16408675 caatacaccaa 16408665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 54175017 - 54175146
Alignment:
Q  168 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctgg-aaacaacttcttgtgtaagaaataaggt 266  Q
    |||||||||||||||||||||||| | || ||||||||  ||| |||||| ||||||  |||||||||||| ||||| | |||||||||| ||| | |||    
T  54175017 taaagggggagccttggcgcaacgat-aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaa-aaacagggt 54175114  T
Q  267 aagactgcgtccaatacaccaaaatggcggga 298  Q
    ||| |||||| |||||||||||||||| ||||    
T  54175115 aaggctgcgtacaatacaccaaaatggtggga 54175146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 54966976 - 54967075
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||| ||||||||||||| |||| ||||||||  ||| |||||||||||| ||||||||| ||||||| ||| |||||||||| ||| | ||||||    
T  54966976 aagggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaag 54967075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 54640511 - 54640433
Alignment:
Q  178 gccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  54640511 gccttggcgcaacggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaa 54640433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 7038050 - 7038130
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatgg 293  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  7038050 ctgaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacaccaaaatgg 7038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 17043571 - 17043455
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||| ||||||||||||   || ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||| | | | ||||||    
T  17043571 aagggggagtcttggcgcaacg---aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaag 17043475  T
Q  270 actgcgtccaatacaccaaa 289  Q
     |||||| ||||||||||||    
T  17043474 gctgcgtacaatacaccaaa 17043455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 23580388 - 23580263
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||| ||||||||  ||||||||||| ||||||||  ||| ||||||||||||| |||||||| || |||| | | |||||||||| ||| | || |||    
T  23580388 aagggagagccttgatgcaacgctaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggggaag 23580289  T
Q  270 actgcgtccaatacaccaaaatggcg 295  Q
    |||||||   ||||||||||||||||    
T  23580288 actgcgtaggatacaccaaaatggcg 23580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 40915830 - 40915933
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctg 315  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| |||||||| |||||| ||||||||| |||||| ||||| | ||| | |||||||    
T  40915830 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacaaggtaaggctgcgtacaatacacc-aaatggtgggagcccttcccggaccctg 40915927  T
Q  316 cgtatg 321  Q
    ||||||    
T  40915928 cgtatg 40915933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 20224947 - 20225056
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||| | |||||||||||||||||||| |||||||||  ||| | |||||| ||||||     
T  20224947 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgta--aaacagggtaaggctgcgta 20225044  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  20225045 caatacaccaaa 20225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 298
Target Start/End: Complemental strand, 20908817 - 20908689
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaag-gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||||||||| ||||| |||| ||||||||  ||| ||||||  || || |||||||||| |||||||| | |||| | ||| ||| ||||||||    
T  20908817 agggggagccttggcacaacggtaaagttgttgtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaag 20908718  T
Q  270 actgcgtccaatacaccaaaatggcggga 298  Q
     |||||| |||||||||||||||| ||||    
T  20908717 gctgcgtacaatacaccaaaatggtggga 20908689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 41018946 - 41018855
Alignment:
Q  197 tttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| || || |||||| || ||| ||||||||||||    
T  41018946 tttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa-aattagggtaaggctacgtacaatacaccaaa 41018855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 48598995 - 48598886
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  48598995 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 48598898  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  48598897 caatacaccaaa 48598886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 5648222 - 5648332
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  5648222 ccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 5648320  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  5648321 caatacaccaaa 5648332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 6430797 - 6430687
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||| | |||||||||| ||| | |||||| ||||||     
T  6430797 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 6430699  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  6430698 caatacaccaaa 6430687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 42164317 - 42164242
Alignment:
Q  181 ttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||||| ||||||||||    
T  42164317 ttggcgcaacggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaa 42164242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 10660367 - 10660477
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||| || ||||||||||||||||||||| |||| ||||| ||||| |||| | |||| |     
T  10660367 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10660466  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  10660467 caatacaccaa 10660477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 10874512 - 10874622
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||| || ||||||||||||||||||||| |||| ||||| ||||| |||| | |||| |     
T  10874512 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10874611  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  10874612 caatacaccaa 10874622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 21646927 - 21647037
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||  |||||||||||||||||| | |||||||||| ||||| |||||| ||||||     
T  21646927 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgta 21647026  T
Q  278 caatacaccaa 288  Q
    ||||| |||||    
T  21647027 caatataccaa 21647037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 44357217 - 44357303
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 298  Q
    ||||||||||| | ||||||||||| |||||||| | |||||||| |||||  |||||||  ||| |||||||||||||||||||||    
T  44357217 ctgaaaggtcatgagttcaagtcctagaaacaaccttttgtgtaataaatagagtaagacgacgtacaatacaccaaaatggcggga 44357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 51420528 - 51420646
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtg-ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    |||||||||||||||||||||| | || ||||||||  ||| |||||||||||  || |||||||| |||||||||| |||||||||  ||| | |||||    
T  51420528 aagggggagccttggcgcaacggtgaagttgttgtcacgtgactgaaaggtcagttgattcaagtcatggaaacaacctcttgtgtagaaaacagggtaa 51420627  T
Q  269 gactgcgtccaatacacca 287  Q
    | ||| || ||||||||||    
T  51420628 ggctgggtacaatacacca 51420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 43035226 - 43035307
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 274  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||| ||||||||| |||||||||||||| | |||||| ||||    
T  43035226 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggctgc 43035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 30496501 - 30496414
Alignment:
Q  170 aagggggagccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||| |||||||||||  ||||  ||||||||  ||| ||||||||||||||||||||||| |||||||| | ||||||||||    
T  30496501 aagggggagacttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaa 30496414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 30639343 - 30639453
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||   |||||||||| ||| | |||||| ||||||     
T  30639343 ccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaa-aaacagggtaaggctgcgta 30639441  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  30639442 caatacaccaaa 30639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 47443956 - 47444031
Alignment:
Q  214 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||| |||||||||||||||||| | ||||| |||| ||| | |||||| |||||| ||||||||||||    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaa 47444031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 49938771 - 49938684
Alignment:
Q  170 aagggggagccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||| |||||||||| ||||  ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||||||||||    
T  49938771 aagggggagccctggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaa 49938684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 11054316 - 11054209
Alignment:
Q  181 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 279  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||| |||||   |||||||||  ||| | ||||||||||||| ||    
T  11054316 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgta--aaacagggtaagactgcgtaca 11054219  T
Q  280 atacaccaaa 289  Q
    ||||||||||    
T  11054218 atacaccaaa 11054209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 25343144 - 25343262
Alignment:
Q  172 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 271  Q
    ||||||| |||||||||| | |||| ||||||||  ||| |||| |||||||  |||||||| ||||||| |   |||||||||| ||| | |||||| |    
T  25343144 gggggaggcttggcgcaatggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggc 25343243  T
Q  272 tgcgtccaatacaccaaaa 290  Q
    ||||| |||||||||||||    
T  25343244 tgcgtacaatacaccaaaa 25343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 20639777 - 20639688
Alignment:
Q  232 gtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    |||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||||||| ||||  | ||| | |||||||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatg 20639688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 30581639 - 30581518
Alignment:
Q  178 gccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgt 276  Q
    ||||||||||||||||||| ||||||||   |  || |||||||| | ||||||||| |||||||||| |||||||| || ||| | ||||||  || ||    
T  30581639 gccttggcgcaacgctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgt 30581540  T
Q  277 ccaatacaccaaaatggcggga 298  Q
     |||||||||||||||| ||||    
T  30581539 acaatacaccaaaatggtggga 30581518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 47528685 - 47528591
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  47528685 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 47528591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 7385629 - 7385537
Alignment:
Q  197 tttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||  ||| ||||||||||||| ||||||| |||||||||| | || ||||||| ||||| ||||||  || || ||||||||||||    
T  7385629 tttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaa 7385537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 17315470 - 17315375
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 274  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||| |||| |||||||| |||||||||| ||| |||||||| ||||    
T  17315470 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaa-aaacaaggtaaggctgc 17315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 25463119 - 25463163
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  25463119 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 25463163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 50856416 - 50856344
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaac 242  Q
    |||||||||||||||||||||| |||| ||||||||   ||  |||||||||||| ||||||||||| |||||    
T  50856416 aagggggagccttggcgcaacggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 5306835 - 5306725
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||| ||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||  | ||||||  |||||     
T  5306835 ccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aatcagggtaaggttgcgta 5306737  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  5306736 caatacaccaaa 5306725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 30690349 - 30690270
Alignment:
Q  184 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa 263  Q
    ||||| ||||||| | ||||||  ||| ||||||||||||| |||||||||||||||| | | |||||||||| ||||||    
T  30690349 gcgcagcgctaaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataa 30690270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 9832449 - 9832374
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||||| |||||||||||| ||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  9832449 ctgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 9832374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 9987957 - 9987895
Alignment:
Q  227 ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||||||||||| ||||||||||  |||| |||||| |||| | ||||||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaa 9987895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 16911525 - 16911635
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| ||||||||||| |||||| | |||||||||  ||  | |||||| ||||||     
T  16911525 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgta 16911624  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  16911625 caatacaccaa 16911635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 10380080 - 10380004
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||||| ||||||||||||  ||||||| |||||||||| ||||| | ||| | ||||| ||||||||||||    
T  10380080 ctgaaaggtcacttgttcaagtcctacaaacaacctcttgtgtaa-aaataggataaaattgcgtacaatacaccaaa 10380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 37494848 - 37494905
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||    
T  37494848 ctgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 37494905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 32629445 - 32629366
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 252  Q
    |||||||||||||||||||||| ||||   ||||||  ||| ||||||||||||| |||||| |||| |||||| | ||||||    
T  32629445 aagggggagccttggcgcaacggtaaa---gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgt 32629366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 47441711 - 47441591
Alignment:
Q  169 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    ||||| ||||| ||||||||||| |||| ||||||||  ||| ||||||||||||  ||||||||||  ||||||   |||| ||||| ||  | |||||    
T  47441711 aaaggaggagctttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaa 47441612  T
Q  269 gactgcgtccaatacaccaaa 289  Q
    | ||| || ||||||||||||    
T  47441611 ggctgtgtacaatacaccaaa 47441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 12257767 - 12257688
Alignment:
Q  176 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 255  Q
    |||||||| ||||||| |||| ||||||||  |||  |||||||||||| |||||| |||| |||||| | |||||||||    
T  12257767 gagccttgacgcaacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgtgta 12257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 12711561 - 12711479
Alignment:
Q  239 aaacaacttcttgtgtaagaaa-taaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||| |||||||||| ||| || ||||||||||||| ||||||||| |||||||||||  | ||||||||||  |||||||    
T  12711561 aaacaacatcttgtgtaaaaaaatagggtaagactgcgtacaatacacc-aaatggcgggaccccttctcagacctagcgtatg 12711479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 21489099 - 21489170
Alignment:
Q  227 ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 298  Q
    ||||||||||||||||| | ||||| |||| ||| |  |||||||||||| |||| ||||||||||| ||||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaaaatggtggga 21489170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 39077931 - 39077888
Alignment:
Q  213 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||||||| |||||||||||||||||| | ||||||||||    
T  39077931 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 39077888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 29208034 - 29207959
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||||| ||||||||||||||||   | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  29208034 ctgaaaggtcacgggttcaagtcctggaaattgcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 29207959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 298
Target Start/End: Complemental strand, 49938612 - 49938491
Alignment:
Q  177 agccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 275  Q
    ||||||||||||||| ||||  ||||||||  ||| ||||||||||||   |||||||| ||||| || | | |||||||| ||| | |||||| |||||    
T  49938612 agccttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgtaa-aaacagggtaaggctgcg 49938514  T
Q  276 tccaatacaccaaaatggcggga 298  Q
    |||||| || |||||||| ||||    
T  49938513 tccaattcatcaaaatggtggga 49938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 6966044 - 6966129
Alignment:
Q  167 ataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 252  Q
    |||||| |||||||| | ||||||| |||| ||||||||   ||  ||| || ||||| ||||||||| |||||||||||||||||    
T  6966044 ataaagcgggagcctggacgcaacgataaagttgttgtcacatgagtgatagttcacgggttcaagtcttggaaacaacttcttgt 6966129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 298
Target Start/End: Complemental strand, 39029242 - 39029113
Alignment:
Q  169 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    ||||||||||||||   | |||| |||| ||||||||  ||| || ||||||||   ||||||| | |||||||| | |||||||||| ||| | |||||    
T  39029242 aaagggggagccttaaggaaacggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaa 39029143  T
Q  269 gactgcgtccaatacaccaaaatggcggga 298  Q
    | ||| || |||||||| ||||||| ||||    
T  39029142 ggctgtgtacaatacacgaaaatggtggga 39029113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 44363289 - 44363192
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||| ||||| | || ||||||| ||| | |||| | |||||| |||  ||||||||    
T  44363289 taaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaa 44363192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 28362325 - 28362206
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||||||||||||||||| |||| ||||||||  ||||||||||||||||  ||||||||||| |||||  | |||||||||| |||   ||||||    
T  28362325 aagggggagccttggcgcaacggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaag 28362226  T
Q  270 actgcgtccaatacaccaaa 289  Q
     |||||| ||||||||||||    
T  28362225 gctgcgtacaatacaccaaa 28362206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 7644914 - 7645032
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 272  Q
    ||||||||||||||||  | ||||||||||||   ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||||      
T  7644914 ggggagccttggcgcagtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagata 7645013  T
Q  273 gcgtccaatacaccaaaat 291  Q
    |||| ||||||||||||||    
T  7645014 gcgtacaatacaccaaaat 7645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 23419853 - 23419735
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    ||||||||||||||||||||| |||| ||| ||||  ||| || |||||||||  |||||||| ||||||||| | |||||||||| ||| | |||||||    
T  23419853 agggggagccttggcgcaacggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaaga 23419754  T
Q  271 ctgcgtccaatacaccaaa 289  Q
    |||||| ||||||||||||    
T  23419753 ctgcgtacaatacaccaaa 23419735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 19427059 - 19426950
Alignment:
Q  181 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 279  Q
    |||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||||| ||||||||||||| ||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtaca 19426960  T
Q  280 atacaccaaa 289  Q
    ||||||||||    
T  19426959 atacaccaaa 19426950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 11617745 - 11617649
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||    
T  11617745 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 11617649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 48123663 - 48123545
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    ||||||||||||||||||||| |||| ||||| ||  ||| ||||||||||| | |||||||||||||||||| | ||||||||||  || | ||||| |    
T  48123663 agggggagccttggcgcaacggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaa 48123564  T
Q  271 ctgcgtccaatacaccaaa 289  Q
    |||| | ||||||||||||    
T  48123563 ctgcatacaatacaccaaa 48123545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 29907416 - 29907502
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 298  Q
    ||||||||||||| ||||||||||| |||||| | |||||||||| |||||  ||||| |||||| |||||||||||||||| ||||    
T  29907416 ctgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaaaatggtggga 29907502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 46354157 - 46354267
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  |||  || ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| ||||||     
T  46354157 ccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 46354256  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  46354257 caatacaccaa 46354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 7879639 - 7879712
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| |||||||||||||||||||  |||||||||| ||| |||||||| |||||| ||||||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaa 7879712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 289
Target Start/End: Original strand, 19265772 - 19265888
Alignment:
Q  172 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 271  Q
    |||||||| ||||||||||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||| ||| |  ||||||||| ||| | |||||| |    
T  19265772 gggggagcattggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaa-aaagagggtaaggc 19265870  T
Q  272 tgcgtccaatacaccaaa 289  Q
    ||||| ||||||||||||    
T  19265871 tgcgtacaatacaccaaa 19265888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 18512588 - 18512517
Alignment:
Q  214 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 286  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||| |||||| |||||||||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaa-aaatagggtaaggctgcgtacaatacacc 18512517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 42391250 - 42391161
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| |||||||||||  ||| | |||||| |||||| ||||||||||||    
T  42391250 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 42391161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 6736845 - 6736963
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||||||||| | ||||  |||| ||||||||  | | ||||||||||||| |||||||||||  ||||||| |||||| ||| ||| ||||||||    
T  6736845 aagggggagccttgacacaacagtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataa-aaacaaggtaag 6736943  T
Q  270 actgcgtccaatacaccaaa 289  Q
    ||||| | ||||||||||||    
T  6736944 actgcatacaatacaccaaa 6736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 42798632 - 42798743
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||||| ||||||||   |||||||||| ||| |||||||| ||||||     
T  42798632 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgta 42798731  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  42798732 caatacaccaaa 42798743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 10693228 - 10693134
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  10693228 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaagagggtaaggctgcgtacaatacaccaaa 10693134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 48735293 - 48735183
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcc-tggaaacaacttcttgtgtaagaaataaggtaagactgcgt 276  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||| |||||||||| |||||||||  ||| | |||||| ||||||    
T  48735293 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgta--aaacacggtaaggctgcgt 48735196  T
Q  277 ccaatacaccaaa 289  Q
     ||||||||||||    
T  48735195 acaatacaccaaa 48735183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 2541192 - 2541080
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 276  Q
    |||||||||||| | |||| ||||||||  ||| ||| |||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||    
T  2541192 ccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgt 2541093  T
Q  277 ccaatacaccaaa 289  Q
     | ||||||||||    
T  2541092 actatacaccaaa 2541080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 12473259 - 12473379
Alignment:
Q  171 agggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||| |||||||||||||| | |||| ||||||||  ||  ||||||||||| | |||||||||||| ||||||| |||||||| | ||| | ||||||    
T  12473259 aggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaag 12473358  T
Q  270 actgcgtccaatacaccaaaa 290  Q
      ||||| |||||||||||||    
T  12473359 gatgcgtacaatacaccaaaa 12473379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 21172179 - 21172070
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||  ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  21172179 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 21172082  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  21172081 caatacaccaaa 21172070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 33872066 - 33871971
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| |||||||||| || |||||||||||||||||||| |||||||||| ||| | | |||| |||||| ||||||||||||    
T  33872066 taaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaa-aaacaggataaggctgcgtacaatacaccaaa 33871971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 47716460 - 47716532
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||    
T  47716460 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 47716532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 42805502 - 42805597
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || |||||||||||    
T  42805502 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaa 42805597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 43557450 - 43557545
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||||| ||| |  ||||| |||||| |||||||||||    
T  43557450 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaa 43557545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 13805058 - 13805128
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 241  Q
    ||||||||||||||||||| | |||| ||||||||  ||| ||||||||| ||| ||||||||||||||||    
T  13805058 agggggagccttggcgcaatggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 19266406 - 19266524
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    |||||||||||||| |||||| |||| ||||||||  ||| ||||||||||  | |||||||||||| ||| | |  |||| |||| ||| | ||||||     
T  19266406 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaagg 19266505  T
Q  271 ctgcgtccaatacaccaaa 289  Q
    |||||| ||||||||||||    
T  19266506 ctgcgtacaatacaccaaa 19266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 31591247 - 31591201
Alignment:
Q  210 ggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  31591247 ggctgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaa 31591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 32233314 - 32233228
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||| ||||||||||||   ||| ||||||||   || ||||||||||| | |||||||||||||||||||| ||||||||||    
T  32233314 aagggggacccttggcgcaacagaaaaattgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaa 32233228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 16341231 - 16341356
Alignment:
Q  168 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggta 267  Q
    |||||||| ||| |||| |||||| |||| ||||| ||  ||   |||||||||||| |||||||| || |||||| | |||||||||| ||| | ||||    
T  16341231 taaaggggcagcgttggagcaacggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggta 16341330  T
Q  268 agactgcgtccaatacaccaaaatgg 293  Q
    || || ||| ||||||||||||||||    
T  16341331 aggctacgtacaatacaccaaaatgg 16341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 22699127 - 22699030
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||| ||||||||  ||| ||||||||| | | |||||||||||||||| |   |||||||||| ||| | ||||||||||||| |||||||||||||    
T  22699127 taaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaa 22699030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 35203437 - 35203514
Alignment:
Q  213 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||||||||||| ||||||||||||||||||   |||||||||| ||| | | ||||||||||| ||||| |||||||    
T  35203437 tgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatataccaaaa 35203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 7193063 - 7193139
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||||| ||||||||||  |||| ||||||    
T  7193063 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaag 7193139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 289
Target Start/End: Original strand, 11741778 - 11741867
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||  ||| ||||||||||| | |||||||||||| ||||| ||||| |||||  ||||| |||||| |||||| ||||||||||||    
T  11741778 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgta--aaatagggtaaggctgcgtacaatacaccaaa 11741867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 32758224 - 32758333
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| ||| ||     
T  32758224 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgtgta 32758321  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  32758322 caatacaccaaa 32758333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 27629633 - 27629708
Alignment:
Q  214 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  |||||  |||||||||||    
T  27629633 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaa 27629708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 47078025 - 47077947
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||||||||||||   ||||||||||    
T  47078025 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaa 47077947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 14099172 - 14099067
Alignment:
Q  184 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatac 283  Q
    |||| ||| |||| ||||||||  ||| ||||||||||| | ||| |||||||||||| | | | |||||||| ||| | | ||||||||||| ||||||    
T  14099172 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatac 14099073  T
Q  284 accaaa 289  Q
    ||||||    
T  14099072 accaaa 14099067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 14409189 - 14409084
Alignment:
Q  184 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatac 283  Q
    |||| ||| |||| ||||||||  ||| ||||||||||| | ||| |||||||||||| | | | |||||||| ||| | | ||||||||||| ||||||    
T  14409189 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatac 14409090  T
Q  284 accaaa 289  Q
    ||||||    
T  14409089 accaaa 14409084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 35334986 - 35334880
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||||||||||||||   ||| |||||| ||| | |||||||||| ||     
T  35334986 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca--gtctcgtgtaaaaaacagggtaagactgtgta 35334889  T
Q  278 caatacacc 286  Q
    |||||||||    
T  35334888 caatacacc 35334880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 2663057 - 2662996
Alignment:
Q  226 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||||||||||| | |||||||||  ||||| |||||| |||||| ||||||||||||    
T  2663057 gttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctgcgtacaatacaccaaa 2662996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 42102066 - 42101915
Alignment:
Q  169 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    |||||||  |||||||| ||||| |||| ||||||||  ||| ||| |||||||   |||||||||||||||||| | ||||  |||| ||| | |||||    
T  42102066 aaaggggaggccttggcacaacggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaa 42101967  T
Q  269 gactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtat 320  Q
     ||||||| || ||| | ||| ||| ||||  ||||| | ||||||||||||    
T  42101966 cactgcgtacagtactctaaagtggtgggaccctttcccggaccctgcgtat 42101915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 15108527 - 15108458
Alignment:
Q  219 gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||| ||||||||||||||||||  ||||||||||| ||| |||||||| ||| || ||||||| ||||    
T  15108527 gtcacgagttcaagtcctggaaacagtttcttgtgtaa-aaacaaggtaaggctgtgtacaatacatcaaa 15108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 42496007 - 42495933
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 252  Q
    |||||||||||| | |||| ||||||||   || ||||||||||||| |||||||||||||||||| | ||||||    
T  42496007 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 42495933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 3469354 - 3469273
Alignment:
Q  175 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||||||| |||| ||||||||  ||| ||||||||||||    ||||||||| ||||||   ||||||||||    
T  3469354 ggagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaa 3469273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 5180314 - 5180217
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||| ||||||||  ||| ||||||||||| | |||||| | ||||||||| | |||||||| | ||| | |||||||||| || ||| |||||||||    
T  5180314 taaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaaa 5180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 38262330 - 38262257
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| ||||||||||||||||||   |||||||||| ||||| |||||   ||| | ||||||||||||    
T  38262330 aaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaa 38262257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 42476851 - 42476945
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| || ||||||||||  ||||||| |||||||||   ||||||||||  || |||||||| |||||| ||||||||||||    
T  42476851 taaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaa--aacaaggtaaggctgcgtacaatacaccaaa 42476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 8149098 - 8149006
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtg-taagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||  ||| ||| || |||||| |||||||||||| |||| || ||||||| ||| ||||| ||||||  ||||| ||||||||||||    
T  8149098 ttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaaa 8149006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 14732994 - 14732883
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| |||||| |||| | |||||||||||||||||| | ||   ||||| ||| | |||||| ||||||     
T  14732994 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggctgcgt- 14732896  T
Q  278 caatacaccaaaa 290  Q
    |||||||||||||    
T  14732895 caatacaccaaaa 14732883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 7947553 - 7947429
Alignment:
Q  169 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    ||||||||||||||||||||||| |||| ||| |||   ||| ||||||||||||  |||||| ||||||||||||| || ||||||| ||  | |||||    
T  7947553 aaagggggagccttggcgcaacggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaa 7947454  T
Q  269 gactgcgtccaatacaccaaaatgg 293  Q
    | |||||| ||||||||||||||||    
T  7947453 ggctgcgtacaatacaccaaaatgg 7947429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 29356009 - 29355885
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aatggcgg 296  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||||||| | |||||| |||||| ||||||||||| ||||| ||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 29355910  T
Q  297 gagtctttctcagaccctgcgtatg 321  Q
    ||  | ||| | |||||||||||||    
T  29355909 gaccccttcccggaccctgcgtatg 29355885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 321
Target Start/End: Complemental strand, 12222088 - 12221945
Alignment:
Q  180 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 278  Q
    ||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| |    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  279 aatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 321  Q
    |||||||||| ||||| ||||  | ||| | |||||||||||||    
T  12221988 aatacaccaataatggtgggaccccttcccggaccctgcgtatg 12221945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 13905159 - 13905040
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||| ||||||||||||| |||| ||||||||  ||| ||||||||||||| | |||||||||| |||| || |||||||||| ||| | ||||||    
T  13905159 aagggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaag 13905060  T
Q  270 actgcgtccaatacaccaaa 289  Q
     |||| | |||| |||||||    
T  13905059 gctgcatacaattcaccaaa 13905040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 3815249 - 3815138
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| |||||| |||||| ||||||||||||||||||   | |||||||| ||||| |||| ||||||||     
T  3815249 ccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgta 3815150  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  3815149 caatacaccaaa 3815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 1346927 - 1347036
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| |  ||||||||  ||| | |||||| ||||||     
T  1346927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgta--aaacagggtaaggctgcgta 1347024  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  1347025 caatacaccaaa 1347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 1354927 - 1354818
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  1354927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 1354830  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  1354829 caatacaccaaa 1354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 9161101 - 9161229
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aat 291  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||| ||| |  ||||| |||||| ||||||| ||| |||    
T  9161101 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaa-aaacagagtaaggctgcgtacaatacatcaataat 9161199  T
Q  292 ggcgggagtctttctcagaccctgcgtatg 321  Q
    || ||||  | ||||| |||||||||||||    
T  9161200 ggtgggaccccttctcggaccctgcgtatg 9161229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 2166550 - 2166506
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  2166550 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 2166506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 2178183 - 2178139
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  2178183 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 2178139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 14553511 - 14553586
Alignment:
Q  215 aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||||||||  |||||||||||||||| | |||||||||||| ||||| |||||| ||| ||  ||||||||||||    
T  14553511 aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaa 14553586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 12889379 - 12889465
Alignment:
Q  168 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt 254  Q
    |||||||||||||||||| ||||| |||| ||||||||  |||  |||||||||||  ||||||||| || ||||| | ||||||||    
T  12889379 taaagggggagccttggcacaacggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgt 12889465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 8409206 - 8409311
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| |||||||   ||| |||||||||||||  ||||||||||||||||  | |||||||||| ||| | |||||| ||||||     
T  8409206 ccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgta 8409305  T
Q  278 caatac 283  Q
    ||||||    
T  8409306 caatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 17432337 - 17432394
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||    
T  17432337 ctgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaag 17432394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 6024234 - 6024306
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||||||||  ||||| |||| |||||| | |||||||||| ||| | ||||||||||||| |||||||||||    
T  6024234 aaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaa 6024306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 265
Target Start/End: Complemental strand, 14975252 - 14975165
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 265  Q
    |||||||||||| | |||| ||||||||  ||| ||| |||||||||  ||||||||||||||||| | |||||||||| ||| ||||    
T  14975252 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaacaagg 14975165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 20400650 - 20400737
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacac 285  Q
    ||||||||  ||| ||||||||||||  ||||||||  |||||||||  |||||||||| ||| | ||||||||||||| || |||||    
T  20400650 ttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtacagtacac 20400737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 24751176 - 24751131
Alignment:
Q  248 cttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatgg 293  Q
    ||||||||| ||||| ||||||||||||| |||||||| |||||||    
T  24751176 cttgtgtaaaaaatagggtaagactgcgtacaatacactaaaatgg 24751131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 33138838 - 33138907
Alignment:
Q  220 tcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||| |||||||||||||||||||| |||||| ||| ||| |  ||||| | |||| ||||||||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaaa 33138907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 22967172 - 22967212
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  22967172 aaggtcactagttcaagtcatggaaacaacttcttgtgtaa 22967212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 23821221 - 23821181
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  23821221 aaggtcactagttcaagtcatggaaacaacttcttgtgtaa 23821181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 32728313 - 32728217
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||   |||||||  |||||||||| |||| ||||| ||| | |||||||||| || ||||| ||||||    
T  32728313 taaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatataccaaa 32728217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 298
Target Start/End: Complemental strand, 209107 - 208980
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||||||||||||| || |||| ||||||||  ||| || |||||||||  ||||||||||||| |||||| |||||||||| ||| | ||||||    
T  209107 aagggggagccttggcgcagcggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaa-aaacagggtaag 209009  T
Q  270 actgcgtccaatacaccaaaatggcggga 298  Q
     |||| | |||||||||||||||| ||||    
T  209008 gctgcattcaatacaccaaaatggtggga 208980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 317
Target Start/End: Complemental strand, 28516596 - 28516467
Alignment:
Q  188 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacca 287  Q
    |||| |||| |||||||| |||||||||||||||||| ||||||||| |||||||| | |||||||||| ||| | | || | |||||| ||||||| ||    
T  28516596 aacggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatca 28516497  T
Q  288 aaatggcgggagtctttctcagaccctgcg 317  Q
    |||||| ||||  | ||| |||||||||||    
T  28516496 aaatggtgggacccattcccagaccctgcg 28516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 23974744 - 23974840
Alignment:
Q  179 ccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 275  Q
    ||||||||||||| |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| |||||    
T  23974744 ccttggcgcaacggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 38879544 - 38879688
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| ||||||     
T  38879544 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgta 38879643  T
Q  278 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  38879644 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 38879688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 24448853 - 24448964
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | | |||||||| ||||| |||||| ||||||     
T  24448853 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgta 24448952  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  24448953 caatacaccaaa 24448964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 39301078 - 39301163
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 255  Q
    |||||||||||||||||||||| |||| ||||||||  ||  ||||||||||||| ||||||||| ||| |||||| |||||||||    
T  39301078 aagggggagccttggcgcaacggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgta 39301163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 35710276 - 35710385
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||  ||||||||||||| |||||||||||||||||| | |||||||||  ||||| |||||| ||||||     
T  35710276 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctgcgtt 35710373  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  35710374 caatacaccaaa 35710385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 41014282 - 41014392
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  41014282 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 41014380  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  41014381 caatacaccaaa 41014392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 4619278 - 4619168
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| | | |||||||||| ||| | |||||| ||||||     
T  4619278 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgta 4619179  T
Q  278 caatacaccaa 288  Q
    |||||||||||    
T  4619178 caatacaccaa 4619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 42924972 - 42924894
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||| ||| | ||||||  ||||| |||||||||||||    
T  42924972 ctgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaaa 42924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 43334165 - 43334278
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgt 276  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||| || ||| | |||||| ||||||    
T  43334165 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgt 43334264  T
Q  277 ccaatacaccaaaa 290  Q
     |||||||||||||    
T  43334265 acaatacaccaaaa 43334278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 27328730 - 27328825
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||   |||||||||| ||| | |||||| |||||| |||||||||||    
T  27328730 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 27328825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 19143117 - 19143004
Alignment:
Q  175 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 274  Q
    ||||||||||||||| | |||| ||||||||  ||| || ||| | |||  |||||||||||||||||||| |||||||||| ||| | |||||| ||||    
T  19143117 ggagccttggcgcaatggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaa-aaacagggtaaggctgc 19143019  T
Q  275 gtccaatacaccaaa 289  Q
    || || |||||||||    
T  19143018 gtacagtacaccaaa 19143004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 22187282 - 22187360
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    ||||||||||||  ||| |||||||||||||| | |||||||||| ||| | | ||||||||||| |||||||||||||    
T  22187282 ctgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaa 22187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 32703421 - 32703496
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  32703421 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 32703496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 8170154 - 8170045
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | | |||||||  ||| | |||||| ||||||     
T  8170154 ccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgta--aaacagggtaaggctgcgta 8170057  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  8170056 caatacaccaaa 8170045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 10634327 - 10634251
Alignment:
Q  169 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaac 245  Q
    ||||| ||||||||||||||||| | || ||||||||  ||| ||||||||||| | ||||||||||| ||||||||    
T  10634327 aaaggaggagccttggcgcaacggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaac 10634251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 37024711 - 37024648
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||    
T  37024711 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 37024648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 39079946 - 39079875
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 241  Q
    ||||| |||||||||||||||| |||| ||||||||  ||| | ||||||||||| ||||||||| ||||||    
T  39079946 aagggtgagccttggcgcaacggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 43574609 - 43574680
Alignment:
Q  218 ggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||||||||||||||||||||||||||  |||||||||  ||| | |||||| |||||| ||||| ||||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatataccaaa 43574680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 1565394 - 1565472
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||||||| | |||| ||||||||  ||| |||||||||| || |||||||||||||||||||| ||||| ||||    
T  1565394 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaa 1565472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 29334415 - 29334501
Alignment:
Q  235 ctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||||| | |||||||||| ||| |||||||| |||||| |||||||||| ||||| ||||  | ||| | |||||||||||||    
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatg 29334501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 1405188 - 1405261
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| |||||||||||||||||||| |||| | ||| |||||  |||||  ||||| ||||||||||||    
T  1405188 aaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaaa 1405261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 41425952 - 41426021
Alignment:
Q  219 gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||||| |||||||| ||||||||||||| |||||||| ||| | |||||| |||| | |||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaatacaccaa 41426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 321
Target Start/End: Complemental strand, 12006500 - 12006358
Alignment:
Q  181 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtg-ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 278  Q
    |||||||||| ||| || ||||||||  ||| ||||||||||||| | |||||||| |||||||||| |||| ||||| ||||| |||||| || | | |    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatac 12006402  T
Q  279 aatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 321  Q
    |||||||||| ||||| ||||  | ||| |||||||||| ||||    
T  12006401 aatacaccaataatggtgggaccccttcccagaccctgcctatg 12006358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 13801893 - 13801831
Alignment:
Q  226 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    ||||||||||||||| || | |||||||||| ||| | |||||| |||||| |||||||||||    
T  13801893 gttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 13801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 20135623 - 20135677
Alignment:
Q  234 cctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||||||||| | |||||||||| ||| |||||||| |||||| |||||||||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa 20135677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 1850624 - 1850681
Alignment:
Q  199 tgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||||  ||| ||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaa 1850681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 321
Target Start/End: Original strand, 2838732 - 2838883
Alignment:
Q  170 aagggggagccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggta 267  Q
    |||||| | |||||||||||| | |||| ||||||||  ||| ||| |||||||||| | |||||||   |||||| | |||||||||| ||| | ||||    
T  2838732 aaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaa-aaacagggta 2838830  T
Q  268 agactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    || |||||| ||||||||| |||||| ||||  | ||||| |||||||||||||    
T  2838831 aggctgcgtacaatacacc-aaatggtgggatcccttctcggaccctgcgtatg 2838883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 22025540 - 22025597
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    ||||||||||| | |||||||||||||||||| | |||||||||| ||| | ||||||    
T  22025540 ctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 22025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 24903875 - 24903758
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    ||||||||| ||| | ||||| |||||||||||||  ||| |||||| |||| | |  ||||||||| ||||| | | |||||||| ||||| |||||||    
T  24903875 agggggagctttgacacaacggtaaatttgttgtcacgtgactgaaaagtcatgggcacaagtcctgaaaacagccttttgtgtaaaaaatagggtaaga 24903776  T
Q  271 ctgcgtccaatacaccaa 288  Q
     || || |||| ||||||    
T  24903775 ttgtgtacaatccaccaa 24903758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 34074700 - 34074623
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||||  ||||||||||| |||||| | |||||||||| ||| |  |||||  ||||| ||||||||||||    
T  34074700 ctgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacaccaaa 34074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 32781468 - 32781349
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||| ||||||||||| | |||| ||||||    || |||||||||||||| |||||||||  ||||||||| |||||||||| ||| | ||||||    
T  32781468 aagggggaaccttggcgcaatggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaag 32781369  T
Q  270 actgcgtccaatacaccaaa 289  Q
    ||||||| ||||||||||||    
T  32781368 actgcgtacaatacaccaaa 32781349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 290
Target Start/End: Original strand, 10543652 - 10543773
Alignment:
Q  170 aagggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 268  Q
    |||||| | |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||  | |||||||||| ||| | |||||    
T  10543652 aaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaa 10543751  T
Q  269 gactgcgtccaatacaccaaaa 290  Q
    | |||||| |||||||||||||    
T  10543752 ggctgcgtacaatacaccaaaa 10543773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 29420071 - 29419941
Alignment:
Q  168 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaata----a 263  Q
    ||||||||||| |||||  ||||| |||| ||||||||   || ||||||||||||| |||||||||||||||||||| |||||||||| ||| |    |    
T  29420071 taaagggggagtcttggtccaacggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggta 29419972  T
Q  264 ggtaagactgcgtccaatacaccaaaatggc 294  Q
     ||||| |||||| |||||||||||||||||    
T  29419971 agtaaggctgcgtacaatacaccaaaatggc 29419941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 44521552 - 44521425
Alignment:
Q  171 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 270  Q
    |||||||||||||||| |||| |||| ||||| ||  ||| ||||||||||||| |||||| || |||||||||  |||||||||| ||| ||||||||     
T  44521552 agggggagccttggcggaacggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaagg 44521453  T
Q  271 ctgcgtccaatacaccaaaatggcgggag 299  Q
    |||| |  |||||||| ||||||||||||    
T  44521452 ctgcatataatacacc-aaatggcgggag 44521425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 5450245 - 5450360
Alignment:
Q  175 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactg 273  Q
    |||||||||| ||| || |||| ||||||||  ||| ||||||||||||| |||||| ||||||||||||| |||||||| || ||| | |||||| |||    
T  5450245 ggagccttggtgcagcgttaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctg 5450344  T
Q  274 cgtccaatacaccaaa 289  Q
    ||| ||||||||||||    
T  5450345 cgtacaatacaccaaa 5450360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 12024090 - 12023980
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  12024090 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 12023992  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  12023991 caatacaccaaa 12023980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 24200782 - 24200685
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||| ||||||||  ||| |||||| |||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||||    
T  24200782 taaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaa 24200685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 4516529 - 4516413
Alignment:
Q  172 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 271  Q
    |||||||||||||||||||| |||| ||||||||  ||| |||||||||||| | ||||||| || |||||| | |||||||||| ||| | || ||  |    
T  4516529 gggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgc 4516430  T
Q  272 tgcgtccaatacaccaa 288  Q
    ||||| |||||||||||    
T  4516429 tgcgtacaatacaccaa 4516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 14530281 - 14530425
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| || |||     
T  14530281 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgta 14530380  T
Q  278 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 321  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  14530381 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 14530425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 8455488 - 8455377
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| | | | |||||| ||||||     
T  8455488 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgta 8455389  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  8455388 caatacaccaaa 8455377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 11514399 - 11514510
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||| ||||||||||| | |||||||||| ||| || ||||| ||||||     
T  11514399 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgta 11514498  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  11514499 caatacaccaaa 11514510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 99440 - 99326
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 272  Q
    ||||||||||||||||||  |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||| | |||  ||||| ||| | || ||| ||    
T  99440 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctct--tgtaaaaaacatggcaaggct 99343  T
Q  273 gcgtccaatacaccaaa 289  Q
    |||| ||||||||||||    
T  99342 gcgtacaatacaccaaa 99326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 17667980 - 17668076
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| ||| |||||||||| ||  | |||||| |||||| ||||||||||||    
T  17667980 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17668076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 321
Target Start/End: Complemental strand, 15296589 - 15296436
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtg--ttcaagtcctggaaacaacttcttgtgtaagaaataaggta 267  Q
    ||||||||||||||||| |||| |||| |||||||    |||||||||| ||| |||  ||||||||| ||||||| | | |||||||| | | | ||||    
T  15296589 aagggggagccttggcggaacggtaaagttgttgttacatggctgaaagatcatgtgggttcaagtcccggaaacagcctgttgtgtaaaatacagggta 15296490  T
Q  268 agactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    || |||||| ||||| |||||||| | ||||  | ||||| |||||||||||||    
T  15296489 aggctgcgtacaatataccaaaatagtgggatcccttctcggaccctgcgtatg 15296436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 17380416 - 17380331
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 255  Q
    |||||||||||||||||||| |   || ||||||||  ||| | ||||||||||| ||||||||| |||||||||| |||||||||    
T  17380416 aagggggagccttggcgcaatggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta 17380331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 17623565 - 17623638
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| ||||||||||| |||||||| |||||||||| ||  | |||||| |||||| ||||||||||||    
T  17623565 aaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17623638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 17896237 - 17896365
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaaat 291  Q
    |||| ||||||||  ||| | |||||||||||  |||||||||| |||||||| |||||||| || ||||| |||||| |||||| ||||| ||| ||||    
T  17896237 taaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatatacc-aaat 17896335  T
Q  292 ggcgggagtctttctcagaccctgcgtatg 321  Q
    || ||||  | ||||| |||||||||||||    
T  17896336 ggtgggaccccttctcggaccctgcgtatg 17896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 23397744 - 23397838
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||||  ||||| |||||| || ||| ||||||||||||    
T  23397744 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctacgtacaatacaccaaa 23397838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 19614989 - 19615065
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    ||||||||||||| ||||||||||| |||||| | |||||| ||| ||| | ||||||||||||| ||||| |||||    
T  19614989 ctgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaa 19615065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 10546159 - 10546237
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||||| |||||||||||||||||| | |||||| | || ||| | |||||| |||||| ||||||||||||    
T  10546159 ctgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaa 10546237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 44604830 - 44604895
Alignment:
Q  191 gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||||| ||||||||  ||| ||| ||||||||  |||||||||||||||||||| ||||||||||    
T  44604830 gctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaa 44604895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 21779411 - 21779322
Alignment:
Q  198 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||  ||| ||||||||||||| |||||||||||||| ||| | |||||||||  ||| | ||||||  ||||| ||||||||||||    
T  21779411 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgta--aaacagggtaaggttgcgtacaatacaccaaa 21779322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 33795258 - 33795346
Alignment:
Q  188 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 276  Q
    |||| |||| ||||||||  |||  |||||||||||| |||||||||| ||||||||| ||||| |||| ||| | |||||| ||||||    
T  33795258 aacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgt 33795346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 284
Target Start/End: Original strand, 5841006 - 5841097
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaataca 284  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||||| |||||| | | |||||||| ||||| ||||||  ||||| |||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaataca 5841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 12315787 - 12315713
Alignment:
Q  214 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||| ||||||||| |||||||| |||||| | ||| ||| | |||||||||| || ||||||||||||    
T  12315787 gaaaggtcacgagttcaagtcatggaaacagcttcttat-taaaaaacagggtaagactgtgtacaatacaccaaa 12315713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 19977850 - 19977775
Alignment:
Q  214 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||| |||||||| ||||||||| | |||| ||||| ||||| | ||||  ||||| ||||||||||||    
T  19977850 gaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacaccaaa 19977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 288
Target Start/End: Complemental strand, 23145874 - 23145760
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 272  Q
    |||||||||||||| | || |||| |||||||   ||| ||||||||||||| ||||||||| || |||||   |||||||||| ||| |  ||||| ||    
T  23145874 ggggagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggct 23145776  T
Q  273 gcgtccaatacaccaa 288  Q
    |||| |||||||||||    
T  23145775 gcgtacaatacaccaa 23145760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 288
Target Start/End: Complemental strand, 23557664 - 23557550
Alignment:
Q  173 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 272  Q
    |||||||||||||| | || |||| |||||||   ||| ||||||||||||| ||||||||| || |||||   |||||||||| ||| |  ||||| ||    
T  23557664 ggggagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggct 23557566  T
Q  273 gcgtccaatacaccaa 288  Q
    |||| |||||||||||    
T  23557565 gcgtacaatacaccaa 23557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 40417028 - 40416933
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 288  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||| |||||||||| |||||| ||| ||| | || ||| ||| || |||||||||||    
T  40417028 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaa 40416933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 13245220 - 13245182
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgt 254  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  13245220 aaggtcacgagttcaagtcctggaaacaacctcttgtgt 13245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 31821518 - 31821404
Alignment:
Q  170 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 269  Q
    |||||||||||||||||||||| || | ||||| |   ||| ||||||||||||| ||||||||| | |||||| |  | ||||||| ||||| ||||||    
T  31821518 aagggggagccttggcgcaacggtatagttgttat---gtgactgaaaggtcacgagttcaagtcgtagaaacagc--cgtgtgtaaaaaatagggtaag 31821424  T
Q  270 actgcgtccaatacaccaaa 289  Q
      || || ||||||||||||    
T  31821423 gttgtgtacaatacaccaaa 31821404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 35017776 - 35017846
Alignment:
Q  174 gggagccttggcgcaacgctaaatttgttgtccggtggc-tgaaaggtcacgtgttcaagtcctggaaaca 243  Q
    |||||||||||||||||| |||| ||||||||  ||| | |||||||||||| ||| |||||||| |||||    
T  35017776 gggagccttggcgcaacggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaaca 35017846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 7214512 - 7214609
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    |||| ||||||||  ||| ||||||||||| | ||||||||| ||||||||   |||||||||| | | | |||||| |||||| |||||||| ||||    
T  7214512 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaa 7214609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 9671143 - 9671253
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 276  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||| |||||| |||||| ||||||||||| | |||||||||  ||| | |||||| ||||||    
T  9671143 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgta--aaacagggtaaggctgcgt 9671240  T
Q  277 ccaatacaccaaa 289  Q
     ||||||||||||    
T  9671241 acaatacaccaaa 9671253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 14444730 - 14444802
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || | ||||||||||    
T  14444730 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgtgtacgatacaccaaa 14444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 25249894 - 25249799
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||| ||||||||   |||||||||  ||| | |||||| |||||| ||||||||||||    
T  25249894 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtac-aaacagggtaaggctgcgtacaatacaccaaa 25249799  T

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Target: scaffold0049 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 58974 - 59052
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 290  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | ||||||||||||| |||||||||||||    
T  58974 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaa 59052  T

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Target: scaffold0258 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 13195 - 13054
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||||| |||| ||| |||||||| ||||||     
T  13195 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaa-aaacaaggtaaggctgcgta 13097  T
Q  278 caatacaccaaaatggcgggagtctttctcagaccctgcgtatg 321  Q
    |||||||||  ||||| ||||  | ||| |||||||||||||||    
T  13096 caatacacc-gaatggtgggaccccttcccagaccctgcgtatg 13054  T

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Target: scaffold0187 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 10205 - 10111
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |  |||||||||||| ||||||||||||    
T  10205 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagagtaagactgcgtacaatacaccaaa 10111  T

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Target: scaffold0187; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 20533 - 20439
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |  |||||||||||| ||||||||||||    
T  20533 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagagtaagactgcgtacaatacaccaaa 20439  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 46832 - 46905
Alignment:
Q  216 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||| |||||||| ||||||||||| |||||||||| ||||| ||||||  ||||| ||||||||||||    
T  46832 aaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaa 46905  T

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Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 47065 - 46995
Alignment:
Q  168 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctgg 238  Q
    ||||||| ||||||||||||||   |||| |||||||| |||| ||||||||||||| |||||||||||||    
T  47065 taaagggagagccttggcgcaatagtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtcctgg 46995  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 10788 - 10884
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||  ||| ||||||| |||||||||| ||| | |||| | |||||||||||||||||||    
T  10788 taaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaa 10884  T

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Target: scaffold0254 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 4154 - 4198
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  4154 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 4198  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 30542 - 30651
Alignment:
Q  179 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 277  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||| | ||||||     
T  30542 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgta--aaacagggtagggctgcgta 30639  T
Q  278 caatacaccaaa 289  Q
    ||||||||||||    
T  30640 caatacaccaaa 30651  T

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Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 11128 - 11203
Alignment:
Q  212 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 289  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| || ||||| |||| | ||||||||||||    
T  11128 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacaaagtaaggctgcttacaatacaccaaa 11203  T

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Target: scaffold1176 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 1742 - 1679
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||| ||||||| ||||||||||    
T  1742 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaa 1679  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 8869 - 8932
Alignment:
Q  193 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 256  Q
    |||| ||||||||  ||| ||| ||||||||  |||||| ||||||||||||||||||||||||    
T  8869 taaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaa 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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