View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5583_low_8 (Length: 308)
Name: NF5583_low_8
Description: NF5583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5583_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 294
Target Start/End: Complemental strand, 43104503 - 43104227
Alignment:
| Q |
18 |
aataatggattaataagttgatgagttgggtggattaacagatgaaaatgccacccctaaataaaacagtgtagatggaaaagaagaattagatgatgaa |
117 |
Q |
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| T |
43104503 |
aataatggattaataagttgatgagttgggtggattaacagatgaaaatgccacccctaaataaaacagtgtagatggaaaagaagaattagatgatgaa |
43104404 |
T |
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| Q |
118 |
taaaaggagatgttatggaaattgcaagtaggaagatgtaaagaatgttggatttgtgagaaaaagaagagaatgtgcaaggcagcaaggggtagtgctc |
217 |
Q |
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| T |
43104403 |
taaaaggagatgttatggaaattgcaagtaggaagatgtaaagaatgttggatttgtgagaaaaagaagagaatgtgcaaggcagcaaggggtagtgctc |
43104304 |
T |
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| Q |
218 |
cgtgggaattgcaagtgggaagagtaggaagaagctgtggacattgcaagtgggaagatgatacaactttttatttt |
294 |
Q |
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| T |
43104303 |
cgtgggaatagcaagtgggaagagtaagaagaagctgtggacattgcaagtgggaagatgatacaactttttatttt |
43104227 |
T |
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