View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5583_low_9 (Length: 268)
Name: NF5583_low_9
Description: NF5583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5583_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 6324306 - 6324557
Alignment:
| Q |
1 |
agagtatatatgcggaggaaaatgcttgattagttgatgagaaaaatgcttggggtaggaaatgaaaatatgtggctggaaaatacaaatcaaggctgga |
100 |
Q |
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| T |
6324306 |
agagtatatatgcggaggaaaatactt--ttagttgatgagaaaaatgcttggggtaggaaatgaaaatatgtggctggaaaatacaaatcaaggctgga |
6324403 |
T |
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| Q |
101 |
atccatggctaaacacttcccattttaagtgaagaagaaaatgcgtggaattgggttgaactgggaatacttaattacctgggaattcttaagtttgtga |
200 |
Q |
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| T |
6324404 |
atccatggctaaacacttctcattttaagtgaagaagaaaatgcgtggaattgggttgaactgggaatacttaattacctgggaattcttaagtttgtga |
6324503 |
T |
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| Q |
201 |
cgcaagaaatgcgtgacaaaataaagataaaagaaaatgaaaatgtatagtata |
254 |
Q |
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| T |
6324504 |
cgcaagaaatgcgtgacaaaataaagataaaagaaaatgaaaatgtatagtata |
6324557 |
T |
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