View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5584_high_24 (Length: 271)

Name: NF5584_high_24
Description: NF5584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5584_high_24
NF5584_high_24
[»] chr8 (24 HSPs)
chr8 (17-253)||(10069923-10070159)
chr8 (57-211)||(33892140-33892294)
chr8 (89-209)||(9861568-9861688)
chr8 (81-209)||(31212313-31212441)
chr8 (97-213)||(33892032-33892148)
chr8 (70-187)||(8791732-8791849)
chr8 (96-215)||(15229610-15229729)
chr8 (112-211)||(31212443-31212542)
chr8 (97-211)||(6906262-6906375)
chr8 (89-215)||(5879869-5879994)
chr8 (92-207)||(6906412-6906527)
chr8 (97-212)||(14148393-14148507)
chr8 (99-222)||(8791853-8791976)
chr8 (101-212)||(29242429-29242539)
chr8 (96-206)||(1047259-1047369)
chr8 (105-209)||(10069851-10069955)
chr8 (95-184)||(14148828-14148916)
chr8 (89-183)||(36874336-36874430)
chr8 (101-211)||(37037252-37037360)
chr8 (103-184)||(27503640-27503721)
chr8 (111-214)||(39484714-39484816)
chr8 (128-189)||(7766359-7766420)
chr8 (101-210)||(29242820-29242928)
chr8 (139-210)||(20691273-20691343)
[»] scaffold0025 (2 HSPs)
scaffold0025 (57-210)||(63929-64082)
scaffold0025 (89-210)||(63826-63945)
[»] chr6 (16 HSPs)
chr6 (57-214)||(34637528-34637685)
chr6 (67-214)||(13340557-13340704)
chr6 (57-217)||(31298828-31298988)
chr6 (89-207)||(13340445-13340563)
chr6 (95-208)||(24704308-24704421)
chr6 (89-210)||(12289979-12290100)
chr6 (89-209)||(34637425-34637544)
chr6 (95-208)||(7359562-7359674)
chr6 (97-185)||(30519704-30519792)
chr6 (132-211)||(403305-403383)
chr6 (98-188)||(24704727-24704817)
chr6 (92-191)||(2401826-2401925)
chr6 (89-211)||(31298722-31298844)
chr6 (89-212)||(10284213-10284333)
chr6 (129-213)||(6190565-6190648)
chr6 (97-215)||(12290113-12290230)
[»] chr1 (28 HSPs)
chr1 (57-211)||(16706439-16706596)
chr1 (97-209)||(30748951-30749063)
chr1 (97-209)||(30770402-30770514)
chr1 (89-204)||(13765561-13765676)
chr1 (89-211)||(16706333-16706455)
chr1 (97-211)||(14760018-14760131)
chr1 (100-210)||(32800271-32800381)
chr1 (89-211)||(22679335-22679457)
chr1 (92-216)||(15393294-15393417)
chr1 (94-212)||(22679467-22679585)
chr1 (59-209)||(23485670-23485822)
chr1 (94-209)||(30746773-30746887)
chr1 (89-212)||(30749076-30749199)
chr1 (94-209)||(30768224-30768338)
chr1 (89-212)||(30770527-30770650)
chr1 (67-148)||(51941930-51942010)
chr1 (98-209)||(15393145-15393256)
chr1 (89-154)||(51942004-51942069)
chr1 (115-185)||(21537616-21537686)
chr1 (89-212)||(30746897-30747019)
chr1 (89-212)||(30768348-30768470)
chr1 (92-153)||(8819331-8819391)
chr1 (138-207)||(23528233-23528302)
chr1 (168-212)||(35215030-35215074)
chr1 (98-210)||(35294332-35294444)
chr1 (89-206)||(23485808-23485925)
chr1 (162-211)||(39785218-39785267)
chr1 (148-184)||(20754212-20754248)
[»] chr2 (39 HSPs)
chr2 (57-207)||(12874784-12874934)
chr2 (57-207)||(16127920-16128070)
chr2 (57-206)||(981021-981169)
chr2 (57-213)||(4921267-4921423)
chr2 (57-207)||(16126222-16126372)
chr2 (57-207)||(16333253-16333403)
chr2 (89-210)||(37897574-37897695)
chr2 (99-206)||(27847860-27847967)
chr2 (57-188)||(35926745-35926876)
chr2 (98-211)||(18509495-18509608)
chr2 (99-184)||(40152723-40152808)
chr2 (101-214)||(32945607-32945719)
chr2 (119-214)||(7328464-7328558)
chr2 (89-220)||(12874669-12874800)
chr2 (89-210)||(39159231-39159350)
chr2 (89-166)||(25330690-25330767)
chr2 (69-211)||(32945727-32945868)
chr2 (96-215)||(43130286-43130404)
chr2 (89-182)||(16128054-16128146)
chr2 (57-209)||(25330560-25330706)
chr2 (91-219)||(980909-981035)
chr2 (89-184)||(7328357-7328453)
chr2 (128-208)||(37897727-37897807)
chr2 (99-205)||(16126366-16126471)
chr2 (111-211)||(16192570-16192671)
chr2 (101-185)||(26403030-26403114)
chr2 (89-184)||(35926860-35926955)
chr2 (99-205)||(16333154-16333259)
chr2 (97-215)||(30714117-30714233)
chr2 (116-209)||(20972385-20972478)
chr2 (89-210)||(32483645-32483766)
chr2 (95-171)||(8185259-8185335)
chr2 (99-184)||(39751274-39751358)
chr2 (124-186)||(4921192-4921254)
chr2 (95-136)||(17368841-17368882)
chr2 (131-196)||(24225551-24225616)
chr2 (129-214)||(39786311-39786396)
chr2 (129-206)||(39786493-39786569)
chr2 (140-184)||(18257167-18257211)
[»] chr7 (30 HSPs)
chr7 (57-212)||(19105359-19105513)
chr7 (57-206)||(31198302-31198450)
chr7 (67-216)||(9686285-9686435)
chr7 (89-214)||(31198434-31198558)
chr7 (85-213)||(6036544-6036672)
chr7 (57-207)||(21657401-21657553)
chr7 (95-209)||(12821179-12821292)
chr7 (95-209)||(29635235-29635348)
chr7 (89-210)||(7760607-7760728)
chr7 (95-212)||(7760739-7760856)
chr7 (112-208)||(9686444-9686540)
chr7 (67-183)||(31172202-31172317)
chr7 (115-214)||(3555360-3555458)
chr7 (89-211)||(31172311-31172433)
chr7 (97-213)||(15329853-15329970)
chr7 (97-209)||(37081239-37081349)
chr7 (89-211)||(19105254-19105375)
chr7 (101-207)||(20164989-20165095)
chr7 (95-208)||(20164620-20164733)
chr7 (89-214)||(21657292-21657417)
chr7 (97-210)||(35303853-35303966)
chr7 (57-164)||(8129982-8130089)
chr7 (89-207)||(23797180-23797298)
chr7 (95-186)||(29635645-29635736)
chr7 (97-188)||(35304194-35304285)
chr7 (97-215)||(15329991-15330109)
chr7 (120-213)||(35054441-35054534)
chr7 (78-194)||(8104649-8104765)
chr7 (132-214)||(47741036-47741118)
chr7 (133-211)||(18881110-18881190)
[»] chr5 (26 HSPs)
chr5 (57-216)||(25906062-25906220)
chr5 (57-207)||(22297764-22297914)
chr5 (57-205)||(17047859-17048007)
chr5 (57-210)||(13657653-13657806)
chr5 (89-213)||(6843078-6843202)
chr5 (89-207)||(22297898-22298016)
chr5 (89-208)||(25905959-25906078)
chr5 (57-165)||(11929390-11929496)
chr5 (95-216)||(29673284-29673404)
chr5 (89-214)||(2344600-2344725)
chr5 (89-210)||(17047991-17048111)
chr5 (99-214)||(13657544-13657659)
chr5 (95-210)||(24490693-24490807)
chr5 (89-214)||(20510431-20510556)
chr5 (101-210)||(38900222-38900330)
chr5 (101-181)||(8086685-8086765)
chr5 (95-210)||(38298693-38298808)
chr5 (101-185)||(15773715-15773799)
chr5 (154-209)||(2846573-2846628)
chr5 (126-209)||(38299117-38299200)
chr5 (95-213)||(5161045-5161161)
chr5 (155-208)||(2858411-2858464)
chr5 (113-206)||(29673698-29673791)
chr5 (129-220)||(3935954-3936045)
chr5 (126-188)||(20510358-20510420)
chr5 (89-208)||(11929289-11929406)
[»] chr4 (21 HSPs)
chr4 (57-217)||(54164458-54164618)
chr4 (67-216)||(13552662-13552812)
chr4 (89-211)||(54164602-54164724)
chr4 (57-210)||(7513526-7513679)
chr4 (57-209)||(28687565-28687716)
chr4 (112-208)||(13552821-13552917)
chr4 (70-184)||(34665095-34665209)
chr4 (95-185)||(17431102-17431192)
chr4 (96-209)||(32186611-32186722)
chr4 (97-207)||(32185283-32185391)
chr4 (97-184)||(33752327-33752412)
chr4 (95-185)||(17615621-17615710)
chr4 (89-208)||(16854763-16854882)
chr4 (89-184)||(28687486-28687581)
chr4 (93-211)||(33752675-33752791)
chr4 (120-186)||(34665003-34665069)
chr4 (101-214)||(30941471-30941583)
chr4 (98-209)||(17430713-17430824)
chr4 (128-184)||(31078953-31079008)
chr4 (95-182)||(17615971-17616058)
chr4 (89-154)||(7513663-7513726)
[»] chr3 (25 HSPs)
chr3 (89-214)||(4304138-4304263)
chr3 (99-208)||(30173598-30173707)
chr3 (57-210)||(4304247-4304404)
chr3 (67-210)||(32618900-32619043)
chr3 (69-206)||(4475108-4475243)
chr3 (97-215)||(45405045-45405162)
chr3 (98-211)||(30172069-30172181)
chr3 (116-208)||(30430271-30430363)
chr3 (98-210)||(28725656-28725770)
chr3 (96-211)||(6931083-6931198)
chr3 (97-207)||(2928096-2928206)
chr3 (99-213)||(4475249-4475363)
chr3 (101-211)||(43907867-43907976)
chr3 (98-171)||(10821868-10821941)
chr3 (89-186)||(44094174-44094272)
chr3 (97-202)||(44094286-44094391)
chr3 (95-184)||(8896009-8896098)
chr3 (139-215)||(27614008-27614084)
chr3 (71-130)||(10821948-10822007)
chr3 (118-192)||(34502619-34502693)
chr3 (95-184)||(41993118-41993207)
chr3 (158-206)||(30430672-30430720)
chr3 (101-166)||(29491413-29491476)
chr3 (116-154)||(34396901-34396939)
chr3 (111-184)||(11096011-11096084)
[»] scaffold0328 (2 HSPs)
scaffold0328 (89-184)||(11586-11683)
scaffold0328 (81-210)||(11009-11137)
[»] scaffold0009 (1 HSPs)
scaffold0009 (130-216)||(26994-27080)
[»] scaffold0042 (2 HSPs)
scaffold0042 (95-196)||(30700-30800)
scaffold0042 (98-210)||(30310-30421)
[»] scaffold0577 (1 HSPs)
scaffold0577 (98-169)||(1647-1718)
[»] scaffold0129 (1 HSPs)
scaffold0129 (126-184)||(6296-6354)


Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 10069923 - 10070159
Alignment:
Q  17 attttggtccctctaaaattttttatcgatgaattcaattaattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaa 116  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10069923 attttggtccttctaaaatttttcatctatgaattcaattaattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaa 10070022  T
Q  117 aaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaata 216  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10070023 aaattttagagggaccaaaaacctaaaaaatattttaggaggattaaaataaaatattggtatatttaggggaactatttgcttatttaaccctaaaata 10070122  T
Q  217 tttatatttaattctcaacattgttttatgagtgagt 253  Q
    ||||||||||||||||||||||| |||||||||||||    
T  10070123 tttatatttaattctcaacattggtttatgagtgagt 10070159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 57 - 211
Target Start/End: Original strand, 33892140 - 33892294
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||||||| || ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       
T  33892140 aattagtccatactctacattgagtattagactagatcagggactaatttcataaatgaaaaattttagagggaccaaaaacataaagaatattttaaag 33892239  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaacccta 211  Q
    |||||||||| |||| |||||||||||| |  || | ||| ||||||||||||||    
T  33892240 ggactaaaatcaaatgttggtatatttaagaagattgtttacttatttaacccta 33892294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 9861688 - 9861568
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||   |||||||||| |||| ||| |||||||||| |    
T  9861688 tagagcagggactaatttcataaatgaaaaattttagagggaccaaaagcctaaagaatattttatagggactaaaatcaaatgttgatatatttaggag 9861589  T
Q  189 gactatttgcttatttaaccc 209  Q
    |||||||| ||||||||||||    
T  9861588 gactatttacttatttaaccc 9861568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 31212441 - 31212313
Alignment:
Q  81 tattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtata 180  Q
    |||||||||||||||| ||||||||||||| ||  ||  ||||||||||||||||| |||||||||||||||| | |||||||||| |||| ||| ||||    
T  31212441 tattacactagagcagagactaatttcataaatagaattttttagagggaccaaaagcctaaagaatattttatggggactaaaatcaaatgttgatata 31212342  T
Q  181 tttagggggactatttgcttatttaaccc 209  Q
    |||| ||||||||||| ||||||||||||    
T  31212341 tttaaggggactatttacttatttaaccc 31212313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 33892148 - 33892032
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  | |||||||||| |||| |||||||||||| | | |||||||    
T  33892148 ggactaatttcatagatgaaaatttttagaaggaccaaaaacctaaagaatattttgaggggactaaaatcaaatgttggtatatttaagagaactattt 33892049  T
Q  197 gcttatttaaccctaaa 213  Q
     ||||||||||||||||    
T  33892048 acttatttaaccctaaa 33892032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 8791849 - 8791732
Alignment:
Q  70 tctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaa 169  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||  || |||||| ||    
T  8791849 tctacatttagtattacactcgagcagagactaatttcatagatgaaaaattttagagggaccaaaaacctaacaaatattttggggtgagtaaaatcaa 8791750  T
Q  170 atattggtatatttaggg 187  Q
    || ||| |||||||||||    
T  8791749 atgttgatatatttaggg 8791732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 15229729 - 15229610
Alignment:
Q  96 gggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatt 195  Q
    ||||||||||||||| || |||||||||||||||| |||||  | |||||||||||||   ||||||||||||||| |||||||||||| ||| ||||||    
T  15229729 gggactaatttcataaataaaaaattttagagggatcaaaagtcaaaagaatattttatagggactaaaataaaatgttggtatatttaagggaactatt 15229630  T
Q  196 tgcttatttaaccctaaaat 215  Q
    | ||||||||||||||||||    
T  15229629 tacttatttaaccctaaaat 15229610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 31212443 - 31212542
Alignment:
Q  112 atgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaacccta 211  Q
    ||||||||||||||||| | |||||||||||||||||||||| | |||||||||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  31212443 atgaaaaattttagaggaaacaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggagactatttacttatttaacccta 31212542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 6906375 - 6906262
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    ||||||||||||| ||||||||||||| || ||||||||| ||||| |||||||||| | ||||| |||| |||| ||||||||||||||||||||||||    
T  6906375 ggactaatttcatggatgaaaaattttggaaggaccaaaagcctaaggaatattttatggggact-aaatcaaatgttggtatatttagggggactattt 6906277  T
Q  197 gcttatttaacccta 211  Q
     ||||||||||||||    
T  6906276 acttatttaacccta 6906262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 5879994 - 5879869
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||| || |||||||||||| |||||||||| ||||||||||||||  | |||  |||||||||| | ||||||||| ||||||| ||||||||||||     
T  5879994 tagagtagagactaatttcatggatgaaaaatgttagagggaccaaag-cttaagaaatattttagaaagactaaaatcaaatattagtatatttaggga 5879896  T
Q  189 gactatttgcttatttaaccctaaaat 215  Q
    |||||||| ||||||||||||||||||    
T  5879895 gactatttacttatttaaccctaaaat 5879869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 6906412 - 6906527
Alignment:
Q  92 agcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggac 191  Q
    ||||||||||||||| || |||||||| |||| |||||| ||||| |||||| ||||||||| | |||||||||| |||| |||||||||||||||||||    
T  6906412 agcagggactaatttaatggatgaaaatttttggagggatcaaaagcctaaaaaatattttatggggactaaaatcaaatgttggtatatttagggggac 6906511  T
Q  192 tatttgcttatttaac 207  Q
      ||| ||||||||||    
T  6906512 cgtttacttatttaac 6906527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 14148507 - 14148393
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||||||||||| |||||| || || ||||||||||  |||||||||||||||||||||| |||| ||| ||||||||||||||| | ||    
T  14148507 ggactaatttcatagatgaaaatttttag-ggaactaaaaacctaagaaatattttaggaggactaaaatcaaatgttgatatatttagggggaccactt 14148409  T
Q  197 gcttatttaaccctaa 212  Q
     |||||| ||||||||    
T  14148408 acttattaaaccctaa 14148393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 8791853 - 8791976
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgc 198  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||  ||||||||| ||||| |||||| |||| || ||||||||| | | ||||||| |    
T  8791853 actaatttcatagataaaaaaatgtagagggataaaaaacctaagaaatattttatgaggattaaaatcaaatgttagtatatttaagagaactatttac 8791952  T
Q  199 ttatttaaccctaaaatatttata 222  Q
    ||||||||||||||||||| ||||    
T  8791953 ttatttaaccctaaaatatatata 8791976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 29242539 - 29242429
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    ||||||||||||| |||| ||||||||| ||||||| ||||| |||||||||||  ||||||||||||||| ||||||| ||||| ||||| | || |||    
T  29242539 taatttcatagataaaaacttttagaggaaccaaaagcctaatgaatattttagagggactaaaataaaatgttggtat-tttagagggacaagttactt 29242441  T
Q  201 atttaaccctaa 212  Q
    ||||||||||||    
T  29242440 atttaaccctaa 29242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 1047369 - 1047259
Alignment:
Q  96 gggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatt 195  Q
    ||||| |||||||| |||||||  |||| ||||||||||||  |||| |||| ||||||||||| |||||||||||||| |||||||||||  ||| |||    
T  1047369 gggaccaatttcatggatgaaatttttttgagggaccaaaagtctaaggaatgttttaggaggattaaaataaaatattagtatatttaggaagaccatt 1047270  T
Q  196 tgcttatttaa 206  Q
    | |||||||||    
T  1047269 tacttatttaa 1047259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 10069955 - 10069851
Alignment:
Q  105 ttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttattt 204  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||  ||  |||||| |||| |||||| |||||| ||||  |||| ||||| |    
T  10069955 ttcatagatgaaaaattttagaaggaccaaaatcctaaagaatattttagaggggttaaaattaaatgttggtacatttagtgggaacatttacttatgt 10069856  T
Q  205 aaccc 209  Q
    |||||    
T  10069855 aaccc 10069851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 14148828 - 14148916
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||| ||||||||||| |||||||||||| |||| ||||||| |||||| ||||| ||||| |||||||||| |||| ||||||||||||    
T  14148828 agggtctaatttcatatatgaaaaattttggagg-accaaaagcctaaaaaatatgttagggggactaaaatcaaatgttggtatattta 14148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 36874430 - 36874336
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattt 183  Q
    ||||| || ||||||||||||| || | |  ||||||||||||||||||||||| |||||||||||  | |||||||| |||| |||| ||||||    
T  36874430 tagagtagagactaatttcataaataacattttttagagggaccaaaaacctaaggaatattttagaggaactaaaattaaatgttggcatattt 36874336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 37037252 - 37037360
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    ||||||||| |||||||||||||| |||||||||||   ||| |||||||||||  |||||||||| |||| |||| ||||||| |  ||| |||| |||    
T  37037252 taatttcatggatgaaaaatttta-agggaccaaaagtataaggaatattttagagggactaaaatcaaatgttggaatattta-gaagaccatttactt 37037349  T
Q  201 atttaacccta 211  Q
    |||||||||||    
T  37037350 atttaacccta 37037360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 27503640 - 27503721
Alignment:
Q  103 atttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||||||  ||||||||||| ||||||||||||| |||||| ||||||||| |   |||||||| |||||||| ||||||||    
T  27503640 atttcatgaatgaaaaatttcagagggaccaaaagcctaaataatattttatggaaactaaaatcaaatattgatatattta 27503721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 39484714 - 39484816
Alignment:
Q  111 gatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccct 210  Q
    |||||||  |||| |||||||||||| |||||  |||||||||||  || ||||| ||||| ||| |||||||||||| || |||| ||||||||||| |    
T  39484714 gatgaaattttttggagggaccaaaatcctaagaaatattttagggagattaaaa-aaaatgttgatatatttaggggaaccatttacttatttaacctt 39484812  T
Q  211 aaaa 214  Q
    ||||    
T  39484813 aaaa 39484816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 7766359 - 7766420
Alignment:
Q  128 ggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttaggggg 189  Q
    |||| ||||| |||| ||||||| |||| ||||||||||||||| || ||||||||||||||    
T  7766359 ggacaaaaaatctaaggaatattatagggggactaaaataaaatgttagtatatttaggggg 7766420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 29242820 - 29242928
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    |||||||||  ||||||| |||| |||||||| |||||||||  ||| ||||||  |||||||||| |||| ||| ||  |||||||| || |||| |||    
T  29242820 taatttcatgaatgaaaatttttggagggaccgaaaacctaagaaattttttagagggactaaaatcaaatgttgataattttagggg-acaatttactt 29242918  T
Q  201 atttaaccct 210  Q
    ||||||||||    
T  29242919 atttaaccct 29242928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 20691343 - 20691273
Alignment:
Q  139 ctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccct 210  Q
    |||| |||||||||||| ||| |||||| |||| |||||||||||| |||| | |||| |||||||||||||    
T  20691343 ctaaggaatattttagggggaataaaatcaaattttggtatatttaagggg-ccatttacttatttaaccct 20691273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 63929 - 64082
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||     
T  63929 aattagtccctgctctacattgagtattacactagagcagggactaatttcatagatgaaaaatttgagagggactaaaaacctaaataatattttaggg 64028  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccct 210  Q
    | |||||||| |||| ||||||||||||||| |||||||| || ||||||||||    
T  64029 gaactaaaattaaatgttggtatatttagggagactatttactgatttaaccct 64082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 63945 - 63826
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||||||||||||| |||| |||||||||||| || ||||||||||||| |||| |||||| | |||||||||| |||| || ||||||||||  |    
T  63945 tagagcagggactaattttatagttgaaaaattttaaagagaccaaaaacctatagaaaattttatg-ggactaaaatcaaatgtt-gtatatttagaag 63848  T
Q  189 gactatttgcttatttaaccct 210  Q
     | ||||| |||||||||||||    
T  63847 tagtattttcttatttaaccct 63826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 34637528 - 34637685
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||     
T  34637528 aattagtctatgctctacattgagtattacactaaattagggactaatttcttaaatgaaaaattttagagggaccaaaaacctcaagaatattttaggg 34637627  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaa 214  Q
    | |||||||| |||| ||| ||||||||||| |||||||| |||||||||||||||||    
T  34637628 gaactaaaatcaaatgttgatatatttagggtgactatttacttatttaaccctaaaa 34637685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 13340557 - 13340704
Alignment:
Q  67 tgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||| | ||||||||||    
T  13340557 tgctctacattgagtattacactagagcagggactaatttcataaatgaaattttttagagggaccaaaaacctaaagaatattttatggggactaaaat 13340656  T
Q  167 aaaatattggtatatttagggggactatttgcttatttaaccctaaaa 214  Q
     |||| || ||||||||| ||||||||||| | |||||||||||||||    
T  13340657 caaatgttagtatatttaaggggactattttcatatttaaccctaaaa 13340704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 31298828 - 31298988
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||||||  |||||||||  ||| ||||||||||| |||| |||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||      
T  31298828 aattagtgcatgctctacgctgaatattacactagcgcagagactaatttcgtagatgaaaaaatttagagggagcaaaagcctaaagaatattttagag 31298927  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaatat 217  Q
    | |||||||| |||||||||||||||||  |||||||||| |||||||||||||| |||||    
T  31298928 gaactaaaatcaaatattggtatatttaaagggactatttacttatttaaccctataatat 31298988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 13340563 - 13340445
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||| ||||||||| ||  ||||||||||| |||||||||||| |||||||||| |||||   |||||||||| |||| |||||||||||| |||    
T  13340563 tagagcaggaactaatttcttaattgaaaaattttggagggaccaaaagcctaaagaatgttttatagggactaaaatcaaatgttggtatatttaaggg 13340464  T
Q  189 gactatttgcttatttaac 207  Q
    |||||||| ||||||||||    
T  13340463 gactatttacttatttaac 13340445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 24704421 - 24704308
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    ||||||||||||||||| || ||||||||||||||||||||| | |||| |||||||||||  ||||||||| |||||||||||||||||| || || ||    
T  24704421 agggactaatttcatagttggaaaattttagagggaccaaaagcataaataatattttagggagactaaaatcaaatattggtatatttagaggaaccat 24704322  T
Q  195 ttgcttatttaacc 208  Q
    || |||||| ||||    
T  24704321 ttacttattcaacc 24704308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 12290100 - 12289979
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||| |||| ||||||||| |||||||| ||||  ||||| ||||||||||  ||||||||||||  | ||||||| |||| |||||||||||||||     
T  12290100 tagagcggggattaatttcatggatgaaaatttttgaagggatcaaaaacctagggaatattttaggcaggctaaaatcaaatgttggtatatttaggga 12290001  T
Q  189 gactatttgcttatttaaccct 210  Q
    |||||||| |||||||||||||    
T  12290000 gactatttacttatttaaccct 12289979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 34637544 - 34637425
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||  ||||||||||||| |||||   ||||| |||||||||||  || |||||||||||||| |||||||||| |||| |||||||||||| ||     
T  34637544 tagagcatagactaatttcataaatgaatttttttaaagggaccaaaagtctcaagaatattttagg-ggactaaaatcaaatgttggtatatttatgga 34637446  T
Q  189 gactatttgcttatttaaccc 209  Q
    |||||||| ||||||||||||    
T  34637445 gactatttacttatttaaccc 34637425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 7359562 - 7359674
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    ||||| |||||||||||||| |||||||| | |||| ||||| |||||| ||||||||||| ||| |||||| |||| ||||||||||||||| ||| |     
T  7359562 agggattaatttcatagatggaaaattttgg-gggatcaaaagcctaaataatattttagggggagtaaaatcaaatgttggtatatttagggcgacgag 7359660  T
Q  195 ttgcttatttaacc 208  Q
    || |||||||||||    
T  7359661 ttacttatttaacc 7359674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 30519792 - 30519704
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttag 185  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||    || |||||| |||| |||||||||||||    
T  30519792 ggactaatttcatggatgaaaaattttagagggaccaaaaacttaaataatattttaaagagattaaaatcaaatgttggtatatttag 30519704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 403383 - 403305
Alignment:
Q  132 caaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaacccta 211  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| || ||||||| |||||||||| ||||||||||||||    
T  403383 caaaaacctaaagaatattttag-aggattaaaattaaatattagtttatttagagggactatttacttatttaacccta 403305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 24704727 - 24704817
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||| |||| || |||||||| ||||||| |||||  |||||||||||||||| | |||||||| |||||||| ||||||||||||    
T  24704727 gactaattttatagttggaaaattttggagggactaaaaatttaaagaatattttaggggaactaaaatcaaatattgatatatttagggg 24704817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 2401925 - 2401826
Alignment:
Q  92 agcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggac 191  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |||| | || |||| |||||||| || ||||||| ||  ||||||||||||| ||||||    
T  2401925 agcagggaccaatttcataaatgaagaattttagagggactaaaagcttatagaaaattttaggggggctaaaatcaacaattggtatatttaaggggac 2401826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 31298844 - 31298722
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||| | |||||||||||  ||||  ||||||||||||||||||| |||||  ||||||||||  ||| |||||| |||| ||||||| ||||  |     
T  31298844 tagagcatgcactaatttcatttatgagcaattttagagggaccaaaagcctaagaaatattttagagggattaaaattaaatgttggtatttttaaaga 31298745  T
Q  189 gactatttgcttatttaacccta 211  Q
    ||  |||| ||||||||||||||    
T  31298744 gatcatttacttatttaacccta 31298722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 10284333 - 10284213
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||||||||||| | ||  ||||||  ||||  ||| ||||| ||| ||| |||||||||| || ||||||||||   | ||||||||||||| ||    
T  10284333 tagagcagggactaatgttatgaatgaaattttttgaaggaaccaataacttaacgaatattttatgaagactaaaata---tgttggtatatttagagg 10284237  T
Q  189 gactatttgcttatttaaccctaa 212  Q
    || ||||| |||||||||||||||    
T  10284236 gattattttcttatttaaccctaa 10284213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 6190648 - 6190565
Alignment:
Q  129 gaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaa 213  Q
    ||||||||||||||  ||||||| ||||| |||||||| |||| ||| ||||||||||| ||  |||| |||| |||||||||||    
T  6190648 gaccaaaaacctaagaaatatttaaggag-actaaaatcaaatgttgatatatttagggagatcatttacttagttaaccctaaa 6190565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 12290113 - 12290230
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggagga-ctaaaataaaatattggtatatttagggggactatt 195  Q
    ||||||||||||| ||||||   ||||| ||||||||||| |  |||||||  |||  ||||| ||||||| |||| |||||||||||| |||||  |||    
T  12290113 ggactaatttcatggatgaatttttttaaagggaccaaaagcg-aaagaattgttttagaggaactaaaattaaatgttggtatattta-ggggatcatt 12290210  T
Q  196 tgcttatttaaccctaaaat 215  Q
    | ||||||||||||||||||    
T  12290211 tacttatttaaccctaaaat 12290230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 57 - 211
Target Start/End: Original strand, 16706439 - 16706596
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||     
T  16706439 aattagtctctgttctacattgagtattacactagagcagagactaatttgatagatggaaaattttagagggaccaaaaacctaaagaatattttaggg 16706538  T
Q  157 ggactaaaataaaatat---tggtatatttagggggactatttgcttatttaacccta 211  Q
    |||||||||| |||| |   ||||||||||||||||||||||| | ||||||||||||    
T  16706539 ggactaaaatcaaatgttggtggtatatttagggggactatttacatatttaacccta 16706596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 30749063 - 30748951
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||| |||| ||||    
T  30749063 ggactaatttcatagatgaaaaattttgaagggaccaaaagcctaaagaatattttagggggactaaaatcaaatatttgtatatttaggaggaccattt 30748964  T
Q  197 gcttatttaaccc 209  Q
     ||||||||||||    
T  30748963 acttatttaaccc 30748951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 30770514 - 30770402
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||| |||| ||||    
T  30770514 ggactaatttcatagatgaaaaattttgaagggaccaaaagcctaaagaatattttagggggactaaaatcaaatatttgtatatttaggaggaccattt 30770415  T
Q  197 gcttatttaaccc 209  Q
     ||||||||||||    
T  30770414 acttatttaaccc 30770402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 13765676 - 13765561
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||| |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||     
T  13765676 tagagtagggactaatttcataaatgaaaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttaggga 13765577  T
Q  189 gactatttgcttattt 204  Q
    || ||||| |||||||    
T  13765576 gattatttacttattt 13765561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 16706455 - 16706333
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||  |||||||||| |||| ||||||||||||| ||    
T  16706455 tagaacagagactaatttcatagatgaaaaattttagaaggaccaaaagcctaaagaaaattttagagggactaaaatcaaatgttggtatatttagagg 16706356  T
Q  189 gactatttgcttatttaacccta 211  Q
    || ||||| || |||||||||||    
T  16706355 gaatattttctcatttaacccta 16706333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 14760018 - 14760131
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||| ||| |||||| |||| |||||||||||| |||||  ||||    
T  14760018 ggactaatttcatagatgaaaaattttag-gggaccaaaagcctaaaaaatattttagggggattaaaatcaaatgttggtatatttaaggggatcattt 14760116  T
Q  197 gcttatttaacccta 211  Q
     ||||||||||||||    
T  14760117 acttatttaacccta 14760131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 32800271 - 32800381
Alignment:
Q  100 ctaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgct 199  Q
    ||||||||||| || ||||||||||||||||||||||||||| | ||||||||| ||||| |||||| |||||||| ||||||||| |||||||||| ||    
T  32800271 ctaatttcatacataaaaaattttagagggaccaaaaacctacataatattttatgaggattaaaatcaaatattgatatatttagtgggactatttact 32800370  T
Q  200 tatttaaccct 210  Q
    ||||| |||||    
T  32800371 tatttgaccct 32800381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 22679457 - 22679335
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||||||||||||||| |||||||  |||| ||||||| |||||||||||| |||||||||| ||| |||||| | || ||| |||||| || ||    
T  22679457 tagagcagggactaatttcatggatgaaattttttggagggacaaaaaacctaaaggatattttagggggattaaaatcatatgttgatatattcagagg 22679358  T
Q  189 gactatttgcttatttaacccta 211  Q
    |||||||| ||||||||||||||    
T  22679357 gactatttacttatttaacccta 22679335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 15393294 - 15393417
Alignment:
Q  92 agcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggac 191  Q
    |||| |||||||||||||| ||||||||||| | || ||||||||||||||| ||||||||||| ||||| |||| |||| ||||||||||| |||||||    
T  15393294 agcaaggactaatttcataaatgaaaaatttcaaagagaccaaaaacctaaa-aatattttagggggactgaaatcaaatgttggtatatttcgggggac 15393392  T
Q  192 tatttgcttatttaaccctaaaata 216  Q
     |||| ||||||||| || ||||||    
T  15393393 catttacttatttaatccaaaaata 15393417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 22679467 - 22679585
Alignment:
Q  94 cagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggacta 193  Q
    ||||||||| ||| || ||||||||| ||||||||||||||||||||||  ||||||||||  |||||||||| |||| ||||||||||||||||||       
T  22679467 cagggactagtttaatggatgaaaaaatttagagggaccaaaaacctaacaaatattttagagggactaaaatcaaatgttggtatatttagggggatcg 22679566  T
Q  194 tttgcttatttaaccctaa 212  Q
    ||| |||||||||| ||||    
T  22679567 tttacttatttaactctaa 22679585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 209
Target Start/End: Complemental strand, 23485822 - 23485670
Alignment:
Q  59 ttagtctatgctctacattgagtattacac--tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||||||  ||||||||||||||||||| |  ||||||||  || ||||||||| ||||||||||||||||||||||||||  |||| |  ||||||       
T  23485822 ttagtctccgctctacattgagtattacgcattagagcagaaaccaatttcataaatgaaaaattttagagggaccaaaaatttaaaaagcattttaaat 23485723  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccc 209  Q
    |||||||||| |||||||  ||||||||||| |||||||| |||||| |||||    
T  23485722 ggactaaaatcaaatattaatatatttagggagactatttacttattcaaccc 23485670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 30746887 - 30746773
Alignment:
Q  94 cagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggacta 193  Q
    |||||||||||||||| ||||||| ||||  ||||||| ||||||||||||||||||||| |   |||||||| ||||||| ||||||||| |||||| |    
T  30746887 cagggactaatttcatggatgaaatatttg-gagggacaaaaaacctaaagaatattttaaggaaactaaaatcaaatattagtatatttaaggggacca 30746789  T
Q  194 tttgcttatttaaccc 209  Q
    ||| ||||||||||||    
T  30746788 tttacttatttaaccc 30746773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 30749076 - 30749199
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||||| |||||| || |||||||||||||||||| ||||||||| |||| ||||||||||  | | |||||| |||| ||| |||||||||| |    
T  30749076 tagagcagggattaattttatggatgaaaaattttagaggaaccaaaaacataaaaaatattttagaggaattaaaatcaaatgttgatatatttaggag 30749175  T
Q  189 gactatttgcttatttaaccctaa 212  Q
    || ||||| | |||||||||||||    
T  30749176 gattatttacgtatttaaccctaa 30749199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 30768338 - 30768224
Alignment:
Q  94 cagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggacta 193  Q
    |||||||||||||||| ||||||| ||||  ||||||| ||||||||||||||||||||| |   |||||||| ||||||| ||||||||| |||||| |    
T  30768338 cagggactaatttcatggatgaaatatttg-gagggacaaaaaacctaaagaatattttaaggaaactaaaatcaaatattagtatatttaaggggacca 30768240  T
Q  194 tttgcttatttaaccc 209  Q
    ||| ||||||||||||    
T  30768239 tttacttatttaaccc 30768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 30770527 - 30770650
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||||| |||||| || |||||||||||||||||| ||||||||| |||| ||||||||||  | | |||||| |||| ||| |||||||||| |    
T  30770527 tagagcagggattaattttatggatgaaaaattttagaggaaccaaaaacataaaaaatattttagaggaattaaaatcaaatgttgatatatttaggag 30770626  T
Q  189 gactatttgcttatttaaccctaa 212  Q
    || ||||| | |||||||||||||    
T  30770627 gattatttacgtatttaaccctaa 30770650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 51942010 - 51941930
Alignment:
Q  67 tgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaata 148  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | | |||||||||||| ||||||||||||||| ||||    
T  51942010 tgctctacattgagtattacactagaggagggactaatttcataaaag-aaaattttagagcgaccaaaaacctaaaaaata 51941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 15393256 - 15393145
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttg 197  Q
    ||||||||||||||||||    |||| | |||||||||| ||||| |||||||||||| |||| ||||| ||||||||||||||||  | |||||||||     
T  15393256 gactaatttcatagatgatttttttttgtgggaccaaaagcctaaggaatattttagggggacgaaaattaaatattggtatatttgtgaggactattta 15393157  T
Q  198 cttatttaaccc 209  Q
    ||||||||||||    
T  15393156 cttatttaaccc 15393145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 51942004 - 51942069
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttag 154  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  51942004 tagagcagggattaatttcatagatgaaaaattttagaggaaccaaaaacctaagaaatattttag 51942069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 21537686 - 21537616
Alignment:
Q  115 aaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttag 185  Q
    |||||||||||||||||||||||| | || ||||||||| ||||| |||||| |||||||| |||||||||    
T  21537686 aaaaattttagagggaccaaaaactttaaaaatattttaagaggattaaaattaaatattgatatatttag 21537616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 30746897 - 30747019
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||| ||||||||||||| |||||||| ||||| ||  | |||||| |||| |||||||||    |||||||||| |||| |||||||||||| |      
T  30746897 tagagcatggactaatttcatggatgaaaatttttaaagaaatcaaaaatctaaggaatattttgaagggactaaaatgaaatgttggtatattta-gat 30746995  T
Q  189 gactatttgcttatttaaccctaa 212  Q
    || ||||| |||||||||||||||    
T  30746996 gattatttacttatttaaccctaa 30747019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 30768348 - 30768470
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||| ||||||||||||| |||||||| ||||| ||  | |||||| |||| |||||||||    |||||||||| |||| |||||||||||| |      
T  30768348 tagagcatggactaatttcatggatgaaaatttttaaagaaatcaaaaatctaaggaatattttgaagggactaaaatgaaatgttggtatattta-gat 30768446  T
Q  189 gactatttgcttatttaaccctaa 212  Q
    || ||||| |||||||||||||||    
T  30768447 gattatttacttatttaaccctaa 30768470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 8819331 - 8819391
Alignment:
Q  92 agcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatatttta 153  Q
    |||| |||||||||| || ||||||||||||| ||||| |||||||||||| ||||||||||    
T  8819331 agcaaggactaatttaattgatgaaaaattttggaggg-ccaaaaacctaaggaatatttta 8819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 23528233 - 23528302
Alignment:
Q  138 cctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaac 207  Q
    |||||||||||||| || ||||||||||| |||| ||| |||||||||   |||||||| ||||||||||    
T  23528233 cctaaagaatatttcagaaggactaaaattaaatgttgatatatttagaaagactatttacttatttaac 23528302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 35215074 - 35215030
Alignment:
Q  168 aaatattggtatatttagggggactatttgcttatttaaccctaa 212  Q
    |||||||||||||||||| ||||||| || |||||||||||||||    
T  35215074 aaatattggtatatttagagggactaattacttatttaaccctaa 35215030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 210
Target Start/End: Complemental strand, 35294444 - 35294332
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttg 197  Q
    ||||||||||||  ||| |||||||| |||||||||||| ||| |  |||||||| |  |||||||||| |||| ||| ||||||||  ||||  ||||     
T  35294444 gactaatttcatgaatgtaaaattttggagggaccaaaagcctcagaaatattttcgatggactaaaatcaaatgttgatatatttaaagggatcattta 35294345  T
Q  198 cttatttaaccct 210  Q
     ||||||||||||    
T  35294344 attatttaaccct 35294332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 23485808 - 23485925
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||| | |||||| |||||| ||||||  | ||||||  || ||| ||||||||||||||||||  | | |||||| |||| ||||||| |||||| |    
T  23485808 tagagcggagactaaattcataaatgaaatttgttagagaaactaaatacctaaagaatattttagaggaattaaaatcaaattttggtatgtttaggag 23485907  T
Q  189 gactatttgcttatttaa 206  Q
    ||  |||| |||||||||    
T  23485908 gatcatttacttatttaa 23485925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 39785267 - 39785218
Alignment:
Q  162 aaaataaaatattggtatatttagggggactatttgcttatttaacccta 211  Q
    ||||| |||| ||||||| |||||||||||||||| ||||||||| ||||    
T  39785267 aaaattaaatgttggtatttttagggggactatttacttatttaatccta 39785218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 20754212 - 20754248
Alignment:
Q  148 attttaggaggactaaaataaaatattggtatattta 184  Q
    |||||||| |||||||||||||| |||||||||||||    
T  20754212 attttagggggactaaaataaaaaattggtatattta 20754248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 12874784 - 12874934
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||      
T  12874784 aattagtctctgctctacattgagtcttacactagagcagggactaatttcataaatgaaaacttttagagggaccaaaaacctaaataatattttagag 12874883  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaac 207  Q
    |||||||||| |||||||||||||||| ||  |||||||| ||||||||||    
T  12874884 ggactaaaatcaaatattggtatatttgggaagactatttacttatttaac 12874934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 16128070 - 16127920
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||| ||||||||||||| | ||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  16128070 aattagtctctgctctacattgaattttacactagagaagagactaatttcataaatgaaaaattttagagggaccaaaaacctacataatattttagga 16127971  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaac 207  Q
    |||||||||| |||| |||||||||||| ||||||||||| ||||||||||    
T  16127970 ggactaaaattaaatgttggtatatttaaggggactatttacttatttaac 16127920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 981021 - 981169
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||     
T  981021 aattagtctctgctcaacattgagtattacactagagcagagactaatttcataaatgaaaaattttagagggaccaaaagcctaaagaatattttagg- 981119  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaa 206  Q
    |||||||||| |||| ||||||||||||| | |||||||| |||||||||    
T  981120 ggactaaaatcaaatgttggtatatttagagagactatttacttatttaa 981169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 4921267 - 4921423
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||| |     
T  4921267 aattagtccatgctctacattgagtattacactagagtaggaactaatttcatagatgaaaatttttagagggacaaaaaatctaaaaaatattttaagg 4921366  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaa 213  Q
    ||| |||||| |||| ||| ||||||||| | ||||||||  |||||||||||||||    
T  4921367 ggattaaaatcaaatgttgatatatttagagagactatttatttatttaaccctaaa 4921423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 16126372 - 16126222
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||| | ||||||||||||  | ||||||||||| |||||||| ||||||| |||||||| ||||||||||| |||||| || | |||| |||||||    
T  16126372 aattagtttgtgctctacattggattttacactagagaagggactagtttcataaatgaaaaaatttagagggacaaaaaacgtacataataatttagga 16126273  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaac 207  Q
    |||||||||| |||| |||||||||||| ||||||| ||| ||||||||||    
T  16126272 ggactaaaattaaatgttggtatatttaaggggactgtttacttatttaac 16126222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 16333253 - 16333403
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||| | ||||||||||||  | ||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||| || | |||| |||||||    
T  16333253 aattagtttgtgctctacattggattttacactagagaagggactaatttcataaatgaaaaaatttagagggacaaaaaacgtacataataatttagga 16333352  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaac 207  Q
    ||| |||||| |||| |||||||||||| ||||||| ||| ||||||||||    
T  16333353 ggattaaaattaaatgttggtatatttaaggggactgtttacttatttaac 16333403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 37897695 - 37897574
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| |||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||  ||| |||||| |||| ||||| |||||||| |    
T  37897695 tagagcagagactaatttcatggatgaaaatttttagagggaccgaaaacctaaggaatattttagagggagtaaaatcaaatgttggtctatttaggag 37897596  T
Q  189 gactatttgcttatttaaccct 210  Q
    | |||||| |||||||||||||    
T  37897595 ggctatttccttatttaaccct 37897574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 27847967 - 27847860
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgc 198  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||| |||||||||| | |||||||||| |||| |||||||||||| ||||||||||| |    
T  27847967 actaatttaatagatgaataattttaaagggaccaaaaacttaaggaatattttaagtggactaaaatcaaatgttggtatatttatggggactatttac 27847868  T
Q  199 ttatttaa 206  Q
    ||||||||    
T  27847867 ttatttaa 27847860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 35926876 - 35926745
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||| |||||||||| || ||||| ||||||| || ||||||||||||| ||||||  ||||||||| || ||||||||||| ||||||||| |     
T  35926876 aattagtctttgctctacatcgaatattatactagagtagagactaatttcataaatgaaatgttttagaggaactaaaaacctaaaaaatattttatgg 35926777  T
Q  157 ggactaaaataaaatattggtatatttagggg 188  Q
     ||||||||| |||| ||||||||||||||||    
T  35926776 agactaaaatcaaatgttggtatatttagggg 35926745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 18509608 - 18509495
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttg 197  Q
    ||||||||| | ||||| |||||||| ||||||||||||||| || |||||||||||  |||||||||| |||| ||||||||||||||||||| ||||     
T  18509608 gactaattttacagatggaaaattttggagggaccaaaaaccaaaggaatattttagagggactaaaatcaaatgttggtatatttagggggaccattta 18509509  T
Q  198 cttatttaacccta 211  Q
     |||||||||||||    
T  18509508 attatttaacccta 18509495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 40152808 - 40152723
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| || |||||||||    
T  40152808 actaatttcatagatgaaaaattttggagggacaaaaaatctaaggaatattttaggaggactaaaataaaatgtttgtatattta 40152723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 32945719 - 32945607
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    |||||||||| || |||||||||||||||| |||||| ||||| ||||||||| | |||||||||| |||| ||||||||||| |||||||||||| | |    
T  32945719 taatttcataaat-aaaaattttagagggatcaaaaatctaaataatattttatggggactaaaatcaaatgttggtatattttgggggactatttacct 32945621  T
Q  201 atttaaccctaaaa 214  Q
    ||||||||| ||||    
T  32945620 atttaacccaaaaa 32945607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 7328464 - 7328558
Alignment:
Q  119 attttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaa 214  Q
    |||||||||||||||| |||||||||||||||||| | |||||||| | |||| || |||||||||||| |||||||| |||||||||||| ||||    
T  7328464 attttagagggaccaataacctaaagaatattttatg-ggactaaagtcaaatgttagtatatttagggagactatttacttatttaacccaaaaa 7328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 12874800 - 12874669
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| ||||||||||||||||||||  |||||||| ||||||||  |||| | ||||||||   |||| ||||| |||| |||||||||||||||     
T  12874800 tagagcagagactaatttcatagatgaaattttttagagagaccaaaagtctaagggatattttaaagggaccaaaatcaaatgttggtatatttaggga 12874701  T
Q  189 gactatttgcttatttaaccctaaaatattta 220  Q
     || |||| ||||||||||||| || ||||||    
T  12874700 aaccatttacttatttaaccctcaattattta 12874669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 39159231 - 39159350
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||||| |||||||||||||||   | | ||||||| |||| || ||||||||| | |    
T  39159231 tagagcagggactaatttcatggatgaaattttttggagggaccaaaatcctaaagaatatttt--tatggctaaaatcaaatgttagtatatttaagag 39159328  T
Q  189 gactatttgcttatttaaccct 210  Q
    |||||||  |||||||||||||    
T  39159329 gactattaacttatttaaccct 39159350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 25330690 - 25330767
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaat 166  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||   ||||||||||    
T  25330690 tagagcagggactaatttcataaatgaaaatttttagaaggaccaaaaacctaaaaaatattttaaagggactaaaat 25330767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 32945727 - 32945868
Alignment:
Q  69 ctctacattgagtattacactagagcagggactaatttcataga-tgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaata 167  Q
    ||||||||||||||||| |||||||||| ||||||||||||| | | |||||||| |||| ||  ||||||||| ||||||||||| |   | ||||||     
T  32945727 ctctacattgagtattatactagagcagagactaatttcataaattaaaaaatttgagagagataaaaaacctagagaatattttatggaaattaaaatc 32945826  T
Q  168 aaatattggtatatttagggggactatttgcttatttaacccta 211  Q
    |||| ||||||||||||  || | ||||| ||||||||||||||    
T  32945827 aaattttggtatattta--ggaattatttacttatttaacccta 32945868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 43130286 - 43130404
Alignment:
Q  96 gggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatt 195  Q
    ||||||||||||||  ||| |||||||| |||||||||||| ||||| ||| ||||| |  ||||| |||| |||| | ||||||||||||| ||| |||    
T  43130286 gggactaatttcatgaatggaaaattttggagggaccaaaagcctaaggaaaattttggagggactgaaatcaaatgt-ggtatatttagggagaccatt 43130384  T
Q  196 tgcttatttaaccctaaaat 215  Q
    | ||||||||||||||||||    
T  43130385 tacttatttaaccctaaaat 43130404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 16128054 - 16128146
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatt 182  Q
    |||||||| ||||||||||||| ||||||||| ||||| | |||| |||||||||||||||||||  |||| |||||| |||| ||||||||||    
T  16128054 tagagcagagactaatttcataaatgaaaaatgttagaagaaccagaaacctaaagaatatttta-aaggattaaaatcaaattttggtatatt 16128146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 25330706 - 25330560
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||  ||||||||||||| |||||||||      | ||||||||||||| |||||   ||||| |  ||| ||||| |||||||| |||||||      
T  25330706 aattagtccctgctctacattgaatattacact------gtgactaatttcataaatgaagttttttataaagacaaaaaatctaaagaaaattttagag 25330613  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccc 209  Q
    |||||||||| |||| ||| | |||||||||||||||||| ||||||||||||    
T  25330612 ggactaaaatcaaatgttgatgtatttagggggactatttacttatttaaccc 25330560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 981035 - 980909
Alignment:
Q  91 gagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttaggggga 190  Q
    |||||| |||||||||||||||| |||  |||||| |||||||||| |||||  |||||||||| ||||||||||| |||| ||| ||||||||  ||||    
T  981035 gagcagagactaatttcatagataaaattttttag-gggaccaaaagcctaagaaatattttag-aggactaaaatcaaatgttgatatatttaaaggga 980938  T
Q  191 ctatttgcttatttaaccctaaaatattt 219  Q
      |||| ||||||||||| | ||||||||    
T  980937 tcatttacttatttaacctttaaatattt 980909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 7328453 - 7328357
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaaccta-aagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||||||| || |||||||| |  ||||| |||| ||||  |||||||||||    
T  7328453 tagaacagggactaatttcataaatgaaaaattttagagggactaaaaacctacaaaaatattttggagggactgaaatcaaatgatggtatattta 7328357  T

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Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 37897727 - 37897807
Alignment:
Q  128 ggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaacc 208  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||| ||||||||||||| | |||| ||| |||||||||||    
T  37897727 ggaccaaaagcctaagaaatattttaggaggactaaaacaaaatgttggtatatttagtgagactttttacttatttaacc 37897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 16126366 - 16126471
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgc 198  Q
    |||||||||||| ||||||||| ||||| | |||| |||||||||||||||||||||  || |||||| |||| |||||||||||| | |||  |||| |    
T  16126366 actaatttcataaatgaaaaatgttagaagaaccagaaacctaaagaatattttagg-cgattaaaatcaaattttggtatatttatgaggatcatttac 16126464  T
Q  199 ttattta 205  Q
    |||||||    
T  16126465 ttattta 16126471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 16192570 - 16192671
Alignment:
Q  111 gatgaaaaattttagagggaccaaaaa-cctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccc 209  Q
    |||||||  |||| ||| ||||||||| ||||| ||||||||||||  ||||||||| |||| ||| |||||||| | ||||||||| ||||||||||||    
T  16192570 gatgaaattttttggagagaccaaaaagcctaaggaatattttagggagactaaaatcaaatgttgatatatttaagaggactatttacttatttaaccc 16192669  T
Q  210 ta 211  Q
    ||    
T  16192670 ta 16192671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 26403114 - 26403030
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttag 185  Q
    |||||||||  |||||||||||||||  |||||||| ||| |||||||||||||| |||||||||| |||| ||  |||||||||    
T  26403114 taatttcattaatgaaaaattttagacagaccaaaagcctgaagaatattttagggggactaaaatcaaattttaatatatttag 26403030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 35926860 - 35926955
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||||||  ||||||||||||| || |||||||||||||  | |||||||||||| |||||||||    ||||||||| |||| ||||||||||||    
T  35926860 tagagcaaagactaatttcataaataaaaaattttagagaaatcaaaaacctaaaaaatattttattgagactaaaatcaaatgttggtatattta 35926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 16333259 - 16333154
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgc 198  Q
    |||||||||||| ||||||||| ||||| | |||| |||||||||||||||||||||  || |||||| |||| ||| |||||||| | |||  |||| |    
T  16333259 actaatttcataaatgaaaaatgttagaagaaccagaaacctaaagaatattttagg-cgattaaaatcaaattttgatatatttatgaggatcatttac 16333161  T
Q  199 ttattta 205  Q
    |||||||    
T  16333160 ttattta 16333154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 30714233 - 30714117
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||||||  |||||||| |||| || ||||  ||||| ||||||||| || ||||||||| |||| ||| |||||||| |||||| ||||    
T  30714233 ggactaatttcatagatagaaaatttt-gaggaacaaaaaggctaaaaaatattttaagaagactaaaatcaaatgttgatatatttaaggggaccattt 30714135  T
Q  197 gcttatttaaccctaaaat 215  Q
     | ||||||||||| ||||    
T  30714134 ac-tatttaaccctcaaat 30714117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 20972385 - 20972478
Alignment:
Q  116 aaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccc 209  Q
    |||||||||| ||||||||||||||||  ||||||||  | |||||||||| |||| ||| ||||||||  ||||| |||  ||||||||||||    
T  20972385 aaaattttagcgggaccaaaaacctaagaaatattttttggggactaaaatcaaatgttgatatatttaaagggaccattcacttatttaaccc 20972478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 32483766 - 32483645
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||| || |||| |||||||| ||||||| ||||||||  ||||||| |||||| ||||||||| | | | |||||| |||| |  |||||||||  ||    
T  32483766 tagagtagagactgatttcataaatgaaaatttttagagaaaccaaaagcctaaaaaatattttatgggaattaaaatcaaatgtcagtatatttaaagg 32483667  T
Q  189 gactatttgcttatttaaccct 210  Q
     | ||||| |||||||||||||    
T  32483666 aattatttacttatttaaccct 32483645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 8185335 - 8185259
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaat 171  Q
    |||||| || ||||| |||| ||||||||  | ||||||||| |||||| ||||||||||| |||||||||| ||||    
T  8185335 agggaccaacttcatggatggaaaattttgaatggaccaaaagcctaaataatattttagggggactaaaatcaaat 8185259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 39751358 - 39751274
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaag-aatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||||||||||| |||||||||||| |  ||||||||||  | ||| ||||||||| | | |||||||| |||||||||||||||||    
T  39751358 actaatttcatatatgaaaaattttgg--ggaccaaaaagtttaaggaatattttaagggaactaaaatcaaatattggtatattta 39751274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 4921254 - 4921192
Alignment:
Q  124 agagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagg 186  Q
    ||||||||||||| | ||| |||||||||| | | | |||||| |||||||||||||||||||    
T  4921254 agagggaccaaaagcttaaggaatattttaagggaattaaaatcaaatattggtatatttagg 4921192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 17368841 - 17368882
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaa 136  Q
    |||||| |||||||||| || |||||||||||||||||||||    
T  17368841 agggaccaatttcatagctggaaaattttagagggaccaaaa 17368882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 24225551 - 24225616
Alignment:
Q  131 ccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    ||||||||||||||||||||||| || || |||||| |||||||  ||||||| | ||||| ||||    
T  24225551 ccaaaaacctaaagaatattttatgaagattaaaatcaaatattaatatattttgagggaccattt 24225616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 39786396 - 39786311
Alignment:
Q  129 gaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaa 214  Q
    ||||||||  |||| ||| |||||||   ||||||||| |||| ||||||||||||   ||| ||||| |||||||||||||||||    
T  39786396 gaccaaaagtctaaggaaaattttagcgagactaaaatcaaatgttggtatatttaataggattatttacttatttaaccctaaaa 39786311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 39786493 - 39786569
Alignment:
Q  129 gaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaa 206  Q
    ||||||||  ||||| ||||||||||| |||||||||| ||||  |||||||||||  | |||||||| |||||||||    
T  39786493 gaccaaaattctaaaaaatattttagggggactaaaattaaatgctggtatattta-tgagactatttacttatttaa 39786569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 18257211 - 18257167
Alignment:
Q  140 taaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    ||||||| |||||||  ||||||||| ||||||||||||||||||    
T  18257211 taaagaaaattttagagggactaaaacaaaatattggtatattta 18257167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 19105359 - 19105513
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||||||| ||||||||||| |||| |     
T  19105359 aattagtcaatgctctacattgagtattacactagagcatagactaatttcataaatgaaaa-ttttagagggaccaaaagcctaaagaatagtttaagg 19105457  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaa 212  Q
    |||||||||| |||  |||||||||||||||||||||||| |||||||||||||||    
T  19105458 ggactaaaatcaaaagttggtatatttagggggactatttacttatttaaccctaa 19105513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 31198450 - 31198302
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||  ||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||| |||||||||| |    
T  31198450 aattagtccctgctctatattgagtattacattagagcagggattaatttcataaatgaaaaattttagagggatcaataacctaaaaaatattttagaa 31198351  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaa 206  Q
    |||||||||| |||| |||||||||||| ||| ||||||| |||||||||    
T  31198350 ggactaaaatcaaatgttggtatattta-gggaactatttacttatttaa 31198302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 9686435 - 9686285
Alignment:
Q  67 tgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggact-aaaa 165  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||| | |||| ||||||||  | ||||| ||||    
T  9686435 tgctctacattgagtattacactagagcagagactaatttcataaatgaaaaattttagaacgaccaaaagcttaaaaaatattttttggggactaaaaa 9686336  T
Q  166 taaaatattggtatatttagggggactatttgcttatttaaccctaaaata 216  Q
    | ||||||| |||||||||||| || ||||| |||||||||||| ||||||    
T  9686335 tcaaatattagtatatttagggagattatttacttatttaacccaaaaata 9686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 31198434 - 31198558
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||| |||||||| |||| ||||||||||||  ||    
T  31198434 tagagcagggactaatttcatagatgaaaaattttagaggg-ccaaaagcctaagaaatattttaggagaactaaaatcaaatgttggtatatttaaagg 31198532  T
Q  189 gactatttgcttatttaaccctaaaa 214  Q
    |||||||| |||||||||||| ||||    
T  31198533 gactatttacttatttaacccaaaaa 31198558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 6036672 - 6036544
Alignment:
Q  85 acactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    ||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||| | ||||||| | |||||||||| |||| ||| ||||||||    
T  6036672 acactagagtagagactaatttcataaatgaaaaattttagagaggccaaaaacctaaaaactattttaaggggactaaaatcaaatgttgatatattta 6036573  T
Q  185 gggggactatttgcttatttaaccctaaa 213  Q
    |||| ||||||| |||||||||| |||||    
T  6036572 ggggaactatttacttatttaactctaaa 6036544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 21657401 - 21657553
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcata--gatgaaaaattttagagggaccaaaaacctaaagaatattttag 154  Q
    ||||||||| ||||||||||||||||||||| |||| | || ||||||||||||  ||| |||||||||||||||| ||||| | ||| ||||||||||     
T  21657401 aattagtctctgctctacattgagtattacattagaacgggcactaatttcatatagattaaaaattttagagggatcaaaagcgtaaggaatattttaa 21657500  T
Q  155 gaggactaaaataaaatattggtatatttagggggactatttgcttatttaac 207  Q
    | || |||| || |||| || |||||||||||| |||||||| ||||||||||    
T  21657501 gggggctaatatcaaatgttagtatatttagggagactatttacttatttaac 21657553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 209
Target Start/End: Complemental strand, 12821292 - 12821179
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||| ||| |||||| |||  |||||||||||| |||||| ||    
T  12821292 agggactaatttcatagatgaaaa-ttttagaggaaccaaaagcctaaaaaatattttagggggattaaaatcaaacgttggtatatttaaggggaccat 12821194  T
Q  195 ttgcttatttaaccc 209  Q
    || ||||||||||||    
T  12821193 ttacttatttaaccc 12821179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 209
Target Start/End: Complemental strand, 29635348 - 29635235
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    ||||||||||| |||  |||||||||||||||||||||||||  |||| |||||||||||| |||||||||| |||| ||| ||||||||||||||| ||    
T  29635348 agggactaattacatgtatgaaaaattttagagggaccaaaagtctaaggaatattttagg-ggactaaaatcaaatgttgatatatttagggggaccat 29635250  T
Q  195 ttgcttatttaaccc 209  Q
    || ||||||||||||    
T  29635249 ttacttatttaaccc 29635235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 7760728 - 7760607
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| | |||||||||| |||||| |||||| |||||||||||| |||||||||||||||||| |||||||||| | ||  ||||||||||||  |    
T  7760728 tagagcagaggctaatttcatggatgaacaattttggagggaccaaaagcctaaagaatattttagggggactaaaatcatatgctggtatatttagaag 7760629  T
Q  189 gactatttgcttatttaaccct 210  Q
    || ||||| |||||||||||||    
T  7760628 gattatttacttatttaaccct 7760607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 7760739 - 7760856
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    ||||||||||||||| |||||||| |||| |||||||||||| |||||  |||||||||   |||||||||| |||| |||||||||||||||| |||||    
T  7760739 agggactaatttcatggatgaaaatttttggagggaccaaaagcctaagaaatattttatagggactaaaatcaaatgttggtatatttaggggaactat 7760838  T
Q  195 ttgcttatttaaccctaa 212  Q
    || ||||||||| |||||    
T  7760839 ttacttatttaatcctaa 7760856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 9686444 - 9686540
Alignment:
Q  112 atgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaacc 208  Q
    ||||||||||||||| ||||||||| |||||| ||||||||| | |||||||||| |||||||| |||||||||| ||||||||| |||||||||||    
T  9686444 atgaaaaattttagaaggaccaaaagcctaaataatattttatggggactaaaatcaaatattgatatatttaggaggactatttacttatttaacc 9686540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 31172317 - 31172202
Alignment:
Q  67 tgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaat 166  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||  ||||| |||||||||  |||| ||||||    
T  31172317 tgctctacattgagtattacactagagcagagactaatttcataaatgaaaaactttagagggatcaaaagtctaaaaaatatttta-taggagtaaaat 31172219  T
Q  167 aaaatattggtatattt 183  Q
     |||| ||| |||||||    
T  31172218 caaatgttgatatattt 31172202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 3555458 - 3555360
Alignment:
Q  115 aaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaa 214  Q
    ||||| ||| |||||||||||| |||||  ||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3555458 aaaaaatttggagggaccaaaa-cctaagaaatattttagggggactaaaatcaaatgttggtatatttagggggaccatttgcttatttaaccctaaaa 3555360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 31172311 - 31172433
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||| || |||||||  |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||| || |||||||||  ||    
T  31172311 tagagcaaggtctaattttctagatgaaaatttttagagggaccaaaaacctaaaaaatattttaggaggattaaaatcaaatgtttgtatatttaaagg 31172410  T
Q  189 gactatttgcttatttaacccta 211  Q
    ||  |||| ||||||||| ||||    
T  31172411 gatcatttacttatttaatccta 31172433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 15329970 - 15329853
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaag-aatattttaggaggactaaaataaaatattggtatatttagggggactatt 195  Q
    ||||| |||||||||||||||| |||| || ||||||||||||| ||| ||||| || || |||||||||| |||| |||||||||||| ||||||||||    
T  15329970 ggacttatttcatagatgaaaatttttggatggaccaaaaaccttaagtaatatctttgggggactaaaatcaaatgttggtatatttaaggggactatt 15329871  T
Q  196 tgcttatttaaccctaaa 213  Q
    | | ||||||||||||||    
T  15329870 tccatatttaaccctaaa 15329853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 37081239 - 37081349
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| || |||||||||| |||  ||| |||||||| ||||| |||||    
T  37081239 ggactaatttcataaatgaaaa-ttttagagggaccaaaaacctaaggaatatttttgggggactaaaatcaaacgttgatatattta-ggggaatattt 37081336  T
Q  197 gcttatttaaccc 209  Q
     ||||||||||||    
T  37081337 acttatttaaccc 37081349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 19105375 - 19105254
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||  ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||  ||| || ||||||||| | |    
T  19105375 tagagcattgactaatttcataaatgaaaaattatagagggaccaaaagcctaaagaatatttta-gaggactaaaatcgaatgttagtatatttatgcg 19105277  T
Q  189 gactatttgcttatttaacccta 211  Q
    ||   ||| ||||||||||||||    
T  19105276 gatcttttacttatttaacccta 19105254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 20164989 - 20165095
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    |||||||||||||  |||||| |||||||| ||||||||||| |||||||||||  |||||||||| |||| ||||||||||||||  ||| |||| |||    
T  20164989 taatttcatagatagaaaattgtagagggatcaaaaacctaatgaatattttagagggactaaaatcaaatgttggtatatttaggaagaccatttcctt 20165088  T
Q  201 atttaac 207  Q
    |||||||    
T  20165089 atttaac 20165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 20164733 - 20164620
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    ||||| |||||||||  |||||||||||| |||||||||||||| ||| ||| ||||||  | ||||||||| |||| |||||||||||  |||||| ||    
T  20164733 agggattaatttcatgaatgaaaaattttggagggaccaaaaacttaaggaaaattttaaaatgactaaaatcaaatgttggtatattttaggggaccat 20164634  T
Q  195 ttgcttatttaacc 208  Q
    || |||||||||||    
T  20164633 ttacttatttaacc 20164620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 21657417 - 21657292
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| ||||||||||||| ||||||| |||| || | |||||||  ||||||||||||||| | |  ||||| | |||| ||| |||||||||| |    
T  21657417 tagagcagagactaatttcataaatgaaaattttttgaagaaccaaaagtctaaagaatattttaagggagctaaagttaaatgttgatatatttaggag 21657318  T
Q  189 gactatttgcttatttaaccctaaaa 214  Q
    ||| |||| |||||||||||||||||    
T  21657317 gaccatttacttatttaaccctaaaa 21657292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 210
Target Start/End: Complemental strand, 35303966 - 35303853
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    ||||||||||||| |||  ||| ||||||||||||||||||||| || ||||||| ||| | |||||||| |||||||| ||||||| ||||||| || |    
T  35303966 ggactaatttcatggattgaaagttttagagggaccaaaaacctcaaaaatatttaaggggaactaaaattaaatattgatatatttcgggggaccatgt 35303867  T
Q  197 gcttatttaaccct 210  Q
      ||||||||||||    
T  35303866 aattatttaaccct 35303853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 8129982 - 8130089
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||| |||| ||||||||||||| |||||||||||||||  ||||||||||||| || ||||||||||||| |||||||  | |||  ||||||||| |     
T  8129982 aattcgtctctgctctacattgaatattacactagagcaatgactaatttcataaataaaaaattttagagagaccaaatgcataacaaatattttatgg 8130081  T
Q  157 ggactaaa 164  Q
    ||||||||    
T  8130082 ggactaaa 8130089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 23797180 - 23797298
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| ||| ||||| || ||| |||| |||||||||||||||||| ||||  ||||||||||  |||||||||| |||| ||| |||||||||||     
T  23797180 tagagcagagaccaatttaatggataaaaagttttagagggaccaaaaatctaagaaatattttagagggactaaaatcaaatgttgatatatttaggga 23797279  T
Q  189 gactatttgcttatttaac 207  Q
     ||||||| | ||||||||    
T  23797280 aactatttacatatttaac 23797298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 29635645 - 29635736
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagg 186  Q
    |||||||||||| || |||| |||| ||| |||||||||||| | |||| ||||||||||||| |||||||| |||| ||| ||||||||||    
T  29635645 agggactaattttatggatgtaaaactttggagggaccaaaatcttaaaaaatattttaggagaactaaaatcaaatgttgatatatttagg 29635736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 35304194 - 35304285
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||| ||||||| |||| |||||||  ||| ||||||||  ||||  ||||||||||| |||||||||| || | ||||||||||||||||    
T  35304194 ggactgatttcattgatggaaaatttcggagagaccaaaagactaactaatattttaggcggactaaaatcaattgttggtatatttagggg 35304285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 15329991 - 15330109
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    ||||||||||||| |||||||  |||| ||||||  |||| |||||  |||| |||| ||||| |||||| |||| | | |||||||||| |||| || |    
T  15329991 ggactaatttcatggatgaaattttttggagggataaaaagcctaagaaataatttaagaggattaaaattaaatgtggatatatttaggaggaccatat 15330090  T
Q  197 gcttatttaaccctaaaat 215  Q
     |||||||||||| |||||    
T  15330091 acttatttaacccaaaaat 15330109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 35054534 - 35054441
Alignment:
Q  120 ttttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaa 213  Q
    ||||||||| |||||||  |||||||||||||||   |||  ||||| |||| || ||||||||||  | ||||||| ||||||||||||||||    
T  35054534 ttttagaggaaccaaaagtctaaagaatattttaaagggatcaaaattaaatgttagtatatttagaagaactatttacttatttaaccctaaa 35054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 8104765 - 8104649
Alignment:
Q  78 gagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggt 177  Q
    ||||| || ||||||| |||||||||||| ||| ||| ||||||||||||  || |||| |||||| |||||| ||   ||||| |||| |||| ||| |    
T  8104765 gagtaatatactagagtagggactaattttataaatgtaaaattttagagatactaaaagcctaaaaaatattgtaaagggactgaaatcaaatgttgat 8104666  T
Q  178 atatttagggggactat 194  Q
    |||||||| || |||||    
T  8104665 atatttagaggaactat 8104649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 47741036 - 47741118
Alignment:
Q  132 caaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaa 214  Q
    ||||| |||||  |||||||| || ||||| |||| |||| |||||||||||| |||||| |||| |||| |||||| |||||    
T  47741036 caaaagcctaagaaatatttttgggggactgaaattaaatgttggtatatttatggggaccatttacttaattaaccttaaaa 47741118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 18881190 - 18881110
Alignment:
Q  133 aaaaacctaaagaatattttaggaggactaaaataaaatattgg--tatatttagggggactatttgcttatttaacccta 211  Q
    |||||||||||||||||||||   | |||||||| |||| ||||  |||||||| ||||||||||  ||||||| ||||||    
T  18881190 aaaaacctaaagaatattttaaaggaactaaaatcaaatgttggtatatatttatggggactattcacttattttacccta 18881110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 25906062 - 25906220
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||     
T  25906062 aattagtccctgctctacattgagtattacactagagcagagactaatttcataaatgaaaaattt-agagggaccaaaagcctaaagaatatttaaggg 25906160  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaata 216  Q
    |||||||||| |||| ||| |||||||||| ||| ||||| |||||||||||||||||||    
T  25906161 ggactaaaatcaaatgttgatatatttaggaggattatttacttatttaaccctaaaata 25906220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 22297914 - 22297764
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    |||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||      
T  22297914 aattagtctcagctctacattgagtattacaatagcgcagggactaatttcatagatgagaaattttaaagggaccaaaaacctaaaaaatattttagag 22297815  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaac 207  Q
    |||||||||| |||| ||| ||||||||| |||||||||| ||||||||||    
T  22297814 ggactaaaatcaaatgttgatatatttagagggactatttacttatttaac 22297764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 205
Target Start/End: Complemental strand, 17048007 - 17047859
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||||   |||||||||||||||||    
T  17048007 aattagtctctgctctacattgagtattacagtagagcagagactaacttcataaatgaaaaattttagagggaccaaaagtttaaagaatattttagga 17047908  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttattta 205  Q
    || ||||||| |||||||||||||||||| | |||||||| | ||||||    
T  17047907 gggctaaaatcaaatattggtatatttagagagactatttacatattta 17047859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 13657653 - 13657806
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||| || ||| ||||||||||||    
T  13657653 aattagtttttgctctacattgagtattacactagagcatggactaatttcatacatgaaaatttttagagggaacaaaagccaaaataatattttagga 13657752  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccct 210  Q
      |||||||| |||| || ||||||||  | ||||||||| |||||||||||||    
T  13657753 aaactaaaatcaaatgttagtatatttcagaggactatttacttatttaaccct 13657806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 6843202 - 6843078
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||| || |||||||||  |     
T  6843202 tagagcagggattaatttcatagatgaaaaattttagagggaccaaaaatctaaggaatattctaggaggactaaaatcaaatgtttgtatatttaaaga 6843103  T
Q  189 gactatttgcttatttaaccctaaa 213  Q
    ||||||||  |||||||||||||||    
T  6843102 gactatttatttatttaaccctaaa 6843078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 22297898 - 22298016
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| | |||||||||| |||| || |||||||||||||    
T  22297898 tagagctgagactaatttcataaatgaaaaattttagagggaccaaaaacttaaaaaatattttaaggggactaaaatcaaatgttagtatatttagggg 22297997  T
Q  189 gactatttgcttatttaac 207  Q
    ||| |||| ||||||||||    
T  22297998 gaccatttacttatttaac 22298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 25906078 - 25905959
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||   |||| |||||| |||||||||| |||| ||||||||| || |||    
T  25906078 tagagcagggactaattttatagatgaaaaattttagagggaccaaaagcctatgaaatactttagggggactaaaatcaaatgttggtatatataaggg 25905979  T
Q  189 gactatttgcttatttaacc 208  Q
    ||  |||| |||||||||||    
T  25905978 gatcatttacttatttaacc 25905959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 11929390 - 11929496
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||| | ||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||||  |||||||||||||  |||||||||||     
T  11929390 aattagtttctgctctacattgagtattacactagagtaggaattaatttcatagatggaaaattttagagaaaccaaaaacctaa--aatattttaggg 11929487  T
Q  157 ggactaaaa 165  Q
    |||||||||    
T  11929488 ggactaaaa 11929496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 29673404 - 29673284
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    |||||||||||| || | |||||  ||||||||||| ||||| |||||| |||||||||||||||||||||| |||| |||||||||||| |||||| ||    
T  29673404 agggactaattttatggttgaaattttttagagggaacaaaatcctaaa-aatattttaggaggactaaaatcaaatgttggtatatttaaggggaccat 29673306  T
Q  195 ttgcttatttaaccctaaaata 216  Q
    || ||||||||||||| |||||    
T  29673305 ttacttatttaacccttaaata 29673284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 2344600 - 2344725
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| || |||||| || ||| |||||||||| |||||||||||  |||| |||||| ||||  | ||||||||||||| ||||| |||||||| |    
T  2344600 tagagcagagattaatttaatggataaaaaattttaaagggaccaaaagactaaggaatatgttagaggaactaaaataaaatgttggtctatttaggag 2344699  T
Q  189 gactatttgcttatttaaccctaaaa 214  Q
    |||||||| |||||||||||| ||||    
T  2344700 gactatttacttatttaacccaaaaa 2344725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 17047991 - 17048111
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| ||||||||| ||||||||||  ||||||||| ||||||| |||||| ||| ||||||| |||||||| | |||| |||||||||||| |||    
T  17047991 tagagcagagactaatttaatagatgaaattttttagaggaaccaaaagcctaaaaaatcttttagggggactaaa-tcaaatgttggtatatttaaggg 17048089  T
Q  189 gactatttgcttatttaaccct 210  Q
    ||  |||  |||||||||||||    
T  17048090 gatcattcacttatttaaccct 17048111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 13657659 - 13657544
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgc 198  Q
    |||||||||||||||||||  |||||||| ||||||||  ||||||||||||||||  | |||||||| |||| || |||||||||  ||||| ||||      
T  13657659 actaatttcatagatgaaattttttagagagaccaaaagtctaaagaatattttagaggaactaaaatcaaatgtttgtatatttaaagggaccatttat 13657560  T
Q  199 ttatttaaccctaaaa 214  Q
    |||||||| |||||||    
T  13657559 ttatttaatcctaaaa 13657544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 24490807 - 24490693
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||   |||||||||   ||||||||| |||| |||||||| ||||  |||| ||    
T  24490807 agggactaatttcatagatgagaaattttggagggaccaaaaacttaagagatattttagagagactaaaatcaaatgttggtata-ttagaaggaccat 24490709  T
Q  195 ttgcttatttaaccct 210  Q
    || |||||||||||||    
T  24490708 ttacttatttaaccct 24490693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 20510431 - 20510556
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||||| ||||||||||  ||||||   |||||||||| ||||| |||||| |||||||||   |||||||||| |||| ||  |||||||| | |    
T  20510431 tagagcaggggctaatttcatgaatgaaattgtttagagggatcaaaagcctaaaaaatattttaatgggactaaaatcaaatgtttatatatttatgag 20510530  T
Q  189 gactatttgcttatttaaccctaaaa 214  Q
    |||||||| ||| |||||||||||||    
T  20510531 gactatttacttttttaaccctaaaa 20510556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 38900330 - 38900222
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    |||||||||  ||||||  |||| | || ||||||| | |||| ||||||||||||| ||||||||||||||||||||||||||| ||||  |||| |||    
T  38900330 taatttcatgaatgaaattttttggtggaaccaaaagcataaaaaatattttaggag-actaaaataaaatattggtatatttagagggaaaatttactt 38900232  T
Q  201 atttaaccct 210  Q
    ||||||||||    
T  38900231 atttaaccct 38900222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 8086685 - 8086765
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatat 181  Q
    ||||||||| |||||||| |||| ||||||||||||| ||||| ||||||||||| ||| |||||| ||||||| ||||||    
T  8086685 taatttcatggatgaaaactttttgagggaccaaaaatctaaaaaatattttagggggattaaaatcaaatatttgtatat 8086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 38298808 - 38298693
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    ||||| || |||||||||||||   |||||||| ||| ||||||||||||||||||||||  ||||| |||| |||||||| |||||||||   ||  ||    
T  38298808 agggattattttcatagatgaatttttttagagagacaaaaaacctaaagaatattttagagggacttaaatcaaatattgatatatttagactgatcat 38298709  T
Q  195 ttgcttatttaaccct 210  Q
    || |||||||||||||    
T  38298708 ttacttatttaaccct 38298693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 15773715 - 15773799
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttag 185  Q
    ||||||||| |||||||  |||| |||||||||||| ||||| | ||||||||||| ||||||||| || | || ||||||||||    
T  15773715 taatttcatggatgaaattttttggagggaccaaaagcctaagggatattttaggaagactaaaatcaattgttagtatatttag 15773799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 2846628 - 2846573
Alignment:
Q  154 ggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccc 209  Q
    ||||||||||||| |||| ||| ||||||||||||||| |||| ||||||||||||    
T  2846628 ggaggactaaaatcaaatgttgatatatttagggggaccatttacttatttaaccc 2846573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 38299117 - 38299200
Alignment:
Q  126 agggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccc 209  Q
    ||||||||||| ||||||||| |||||||  | ||||||||  |||||||||||||||| ||  | ||||| ||||||||||||    
T  38299117 agggaccaaaagcctaaagaaaattttagaggaactaaaatcgaatattggtatatttaaggaaaatatttacttatttaaccc 38299200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 5161045 - 5161161
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactat 194  Q
    |||||||||||  ||||||||||| ||||||| ||| |||||||||||| ||||||||||| ||| |||||| |||| ||  |||||||| |   |  ||    
T  5161045 agggactaattctatagatgaaaatttttaga-ggatcaaaaacctaaataatattttagg-ggagtaaaatcaaatgttaatatatttaagaaaatcat 5161142  T
Q  195 ttgcttatttaaccctaaa 213  Q
    || ||||||||||||||||    
T  5161143 ttacttatttaaccctaaa 5161161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 2858464 - 2858411
Alignment:
Q  155 gaggactaaaataaaatattggtatatttagggggactatttgcttatttaacc 208  Q
    |||||||||||| |||| ||| ||||||||||||||| |||| |||||||||||    
T  2858464 gaggactaaaatcaaatgttgatatatttagggggaccatttacttatttaacc 2858411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 29673698 - 29673791
Alignment:
Q  113 tgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaa 206  Q
    |||||| |||| |||||||||||| | |||  ||||||||||  | |||||||| |||| || ||||||||||||| || |||| |||||||||    
T  29673698 tgaaaatttttggagggaccaaaaccttaagaaatattttagaggaactaaaatcaaatgtttgtatatttaggggaaccatttacttatttaa 29673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 3936045 - 3935954
Alignment:
Q  129 gaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaatattta 220  Q
    |||||||||| |||| ||||||||||  ||| | |||| |||||||| |||||||||  | || |||| |||||||||||||  ||||||||    
T  3936045 gaccaaaaacgtaaaaaatattttagagggattgaaatcaaatattgttatatttagatgaaccatttacttatttaaccctttaatattta 3935954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 20510420 - 20510358
Alignment:
Q  126 agggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||| ||||||||||||||||||||  | |||||||||| |||| ||  ||||||||||||    
T  20510420 agggactaaaaacctaaagaatatttttaggggactaaaatcaaatgttaatatatttagggg 20510358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 11929406 - 11929289
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaa-gaatattttaggaggactaaaataaaatattggtatatttaggg 187  Q
    ||||||||  |||||||| ||||||||||| || |||| |||||||||   |||| ||| |||  ||||| ||| || | |||| |||||||||||||||    
T  11929406 tagagcagaaactaatttaatagatgaaaatttctagaaggaccaaaagtataaaagaaaatt--aggag-actgaattcaaatgttggtatatttaggg 11929310  T
Q  188 ggactatttgcttatttaacc 208  Q
    ||||||||| || ||||||||    
T  11929309 ggactattttctcatttaacc 11929289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 54164618 - 54164458
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||  ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||| ||||||  |||||||| ||    
T  54164618 aattagtcactgctctacattgagtattacactagagtagagactaatttcataaatgaaaaattttagatggaccaaaagcctaaaatatattttatga 54164519  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaatat 217  Q
    |||||||||| |||| |||||||||||||   |||||||| ||||||||||||| ||||||    
T  54164518 ggactaaaatcaaatgttggtatatttagaacgactatttacttatttaacccttaaatat 54164458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 13552812 - 13552662
Alignment:
Q  67 tgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggact-aaaa 165  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||| | |||| ||||||||  | ||||| ||||    
T  13552812 tgctctacattgagtattacactagagcagagactaatttcataaatgaaaaattttagaacgaccaaaagcttaaaaaatattttttggggactaaaaa 13552713  T
Q  166 taaaatattggtatatttagggggactatttgcttatttaaccctaaaata 216  Q
    | ||||||| |||||||||||| || ||||| |||||||||||| ||||||    
T  13552712 tcaaatattagtatatttagggagattatttacttatttaacccaaaaata 13552662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 54164602 - 54164724
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    ||||||||| |||| |||||||||||||||     
T  54164602 tagagcagtgactaatttcataaatgaaaaattttagagggaccgaaaacctaaaaaatattttatagagactaaaatcaaatgttggtatatttaggga 54164701  T
Q  189 gactatttgcttatttaacccta 211  Q
    |||||||| ||||||||||||||    
T  54164702 gactatttacttatttaacccta 54164724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 7513679 - 7513526
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||| ||||||||||| ||||||||||||||| |  ||||||||||||| ||||||||||||||| | ||||||| |||||| ||||||||| |     
T  7513679 aattagtctctgctctacattaagtattacactagagtaaagactaatttcataaatgaaaaattttagatgaaccaaaagcctaaaaaatattttaagg 7513580  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccct 210  Q
      | |||||| |||| ||||||||||||| ||  |||||| |||||||||||||    
T  7513579 taattaaaattaaatgttggtatatttagaggagctatttacttatttaaccct 7513526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 28687565 - 28687716
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttagga 156  Q
    ||||||||  ||||||||||| || ||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||      
T  28687565 aattagtccgtgctctacattaagcattacactagagcagggactaattttattgatgaaaaattttagagggaccaaaaccctaaaaaatattttagag 28687664  T
Q  157 ggactaaaataaaatattggtatatttagggggactatttgcttatttaaccc 209  Q
      |||||||| |||| ||| ||||||||   | ||||||| ||||||||||||    
T  28687665 taactaaaatcaaatgttgatatattta-aagaactatttacttatttaaccc 28687716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 13552821 - 13552917
Alignment:
Q  112 atgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaacc 208  Q
    ||||||||||||||| ||||||||| |||||| ||||||||| | |||||||||| |||||||| |||||||||| ||||||||| |||||||||||    
T  13552821 atgaaaaattttagaaggaccaaaagcctaaataatattttatggggactaaaatcaaatattgatatatttaggaggactatttacttatttaacc 13552917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 34665095 - 34665209
Alignment:
Q  70 tctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaa 169  Q
    |||||||| ||||||||||||||| |||||||||||||||  ||||||  || |||| ||| ||||| |||||| |||||||||||  ||||||||| ||    
T  34665095 tctacatttagtattacactagagtagggactaatttcatcaatgaaattttgtagaaggaacaaaagcctaaaaaatattttagggtgactaaaatcaa 34665194  T
Q  170 atattggtatattta 184  Q
    || ||||||||||||    
T  34665195 atgttggtatattta 34665209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 17431102 - 17431192
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttag 185  Q
    ||||| ||||||||| |||||||| |||| |||||||||||| |||||| ||||||||||| |||||||||| |||| ||| |||||||||    
T  17431102 agggattaatttcatggatgaaaatttttggagggaccaaaagcctaaaaaatattttagggggactaaaatcaaatgttgatatatttag 17431192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 32186611 - 32186722
Alignment:
Q  96 gggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatt 195  Q
    |||| |||||||||| ||||||| |||||||| |||||||| |||||||||||||||||  | |||||||| |||| ||||||||||||  ||||| |||    
T  32186611 gggattaatttcataaatgaaaa-ttttagagagaccaaaagcctaaagaatattttagaggaactaaaattaaatgttggtatattta-agggaccatt 32186708  T
Q  196 tgcttatttaaccc 209  Q
    | ||||||||||||    
T  32186709 ttcttatttaaccc 32186722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 32185391 - 32185283
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||   ||||||||||||||| |||||| ||||||| |||| ||||||  |||||||||| |||| ||||||||||||| ||||||||||    
T  32185391 ggactaatttcatgattgaaaaattttagagagaccaacaacctaa-gaat-ttttagagggactaaaatcaaatgttggtatatttagagggactattt 32185294  T
Q  197 gcttatttaac 207  Q
     || |||||||    
T  32185293 actcatttaac 32185283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 33752412 - 33752327
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||||||||||||||||| ||||||||| ||| || |||| || ||||||||||||||| |||||||||| |||||||| ||||||||    
T  33752412 ggactaatttcatagatggaaaattttaaagg-actaaaagcc-aaagaatattttagggggactaaaatcaaatattgatatattta 33752327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 17615710 - 17615621
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttag 185  Q
    |||||||||||||||||||| |||||||| | ||||| |||| |||||   ||||||||||||||||||||| |||||||  |||||||||    
T  17615710 agggactaatttcatagatggaaaattttgg-gggactaaaagcctaagatatattttaggaggactaaaatcaaatattcatatatttag 17615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 16854763 - 16854882
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    |||| ||| ||||||||| || |||||||| ||||| ||| | |||||| |||| |||||||||||  ||||||||||  ||| ||| | ||||||||      
T  16854763 tagatcagagactaattttatggatgaaaatttttaaaggaatcaaaaaactaaggaatattttagacggactaaaatttaatgttgatctatttaggac 16854862  T
Q  189 gactatttgcttatttaacc 208  Q
    |||||||| |||||||||||    
T  16854863 gactatttacttatttaacc 16854882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 28687581 - 28687486
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    ||||||| |||||||||||| | ||||||| ||||||| ||||||||| | ||| |||||||||||   || |||||| |||| ||||||||||||    
T  28687581 tagagcacggactaatttcacatatgaaaatttttagatggaccaaaagcataaggaatattttagagagattaaaattaaatgttggtatattta 28687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 33752675 - 33752791
Alignment:
Q  93 gcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggact 192  Q
    |||||||||||||| ||||||  ||||||| || || ||||||| ||||||||||||||||||  ||||||||| |||| ||| ||||||||   ||||     
T  33752675 gcagggactaatttaatagatagaaaattt-ag-ggaaccaaaagcctaaagaatattttagggagactaaaatcaaatgttgatatatttaaaaggacc 33752772  T
Q  193 atttgcttatttaacccta 211  Q
     ||| ||||||||||||||    
T  33752773 gtttacttatttaacccta 33752791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 34665069 - 34665003
Alignment:
Q  120 ttttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagg 186  Q
    ||||||||||  |||||||||||||||||||||| | |||||||||| |||| || |||||||||||    
T  34665069 ttttagaggggtcaaaaacctaaagaatattttaaggggactaaaatcaaatgttagtatatttagg 34665003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 214
Target Start/End: Original strand, 30941471 - 30941583
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    |||||| ||||||||||| ||||||||| ||  ||||||| |  |||||||||||| ||||||||| |||  || |||||||||| | || ||||| |||    
T  30941471 taattttatagatgaaaatttttagaggaacataaaacctcataaatattttaggaagactaaaatcaaa-gttagtatatttagagagattatttactt 30941569  T
Q  201 atttaaccctaaaa 214  Q
    ||||||| ||||||    
T  30941570 atttaactctaaaa 30941583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 17430824 - 17430713
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttg 197  Q
    |||||||||| |  ||| ||||||||  || || ||||| ||||| |||||||||||  |||||||||| |||| ||||||||||||| ||||| ||||     
T  17430824 gactaatttcttgaatggaaaattttgaagagatcaaaagcctaaggaatattttagagggactaaaatcaaatgttggtatatttagagggacaattta 17430725  T
Q  198 cttatttaaccc 209  Q
     ||| |||||||    
T  17430724 tttacttaaccc 17430713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 31079008 - 31078953
Alignment:
Q  128 ggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    ||||||||| ||||| |||||||||||| |||||||||| ||| |||||||||||||    
T  31079008 ggaccaaaagcctaatgaatattttagggggactaaaattaaa-attggtatattta 31078953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 182
Target Start/End: Original strand, 17615971 - 17616058
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatt 182  Q
    ||||||| ||||| | |||||||||| ||| || || |||||||||||| |||| |||||| | |||||||| |||| ||| ||||||    
T  17615971 agggactgatttcgtggatgaaaaatattaaagagatcaaaaacctaaaaaataatttaggggaactaaaattaaatgttgatatatt 17616058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 7513663 - 7513726
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttag 154  Q
    |||||||| ||||||||||||| || |||||||||| |  |||| |||| ||||||||||||||||    
T  7513663 tagagcagagactaatttcataaataaaaaattttaaa--gacccaaaatctaaagaatattttag 7513726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 4304263 - 4304138
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggg 188  Q
    ||||||| |||||||||||||| ||| ||||||||||| ||||||||| | |||  |||||||||||||||||||||| |||| |||||||||||| |||    
T  4304263 tagagcatggactaatttcatatatgtaaaattttagaaggaccaaaagcttaagaaatattttaggaggactaaaatcaaatgttggtatatttaaggg 4304164  T
Q  189 gactatttgcttatttaaccctaaaa 214  Q
    ||| ||||  ||||||||||||||||    
T  4304163 gacgatttatttatttaaccctaaaa 4304138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 30173598 - 30173707
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgc 198  Q
    |||||||||||||||  ||||||||||||||| ||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||  ||||||| |    
T  30173598 actaatttcatagatataaaattttagagggatcaaaagcctaaagaaaattttagggggactaaaatcaaatattggtatatttagggaaactattttc 30173697  T
Q  199 ttatttaacc 208  Q
    ||||||||||    
T  30173698 ttatttaacc 30173707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 4304247 - 4304404
Alignment:
Q  57 aattagtctatgctctacattgagtattacactagagcagggactaatttcatagatga-aaaattttagaggga---ccaaaaacctaaagaatatttt 152  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || |     |||||||||||   ||||||| |||| |||||||||    
T  4304247 aattagtccatgctctacattgagtattacactagagcagagactaatttcataaataatttttttttagagggaccgccaaaaatctaatgaatatttt 4304346  T
Q  153 aggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccct 210  Q
    ||  |||||||||| |||| ||||||||||||||| || ||||| |||||||||||||    
T  4304347 agagggactaaaatcaaatgttggtatatttagggagattatttacttatttaaccct 4304404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 32618900 - 32619043
Alignment:
Q  67 tgctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaat 166  Q
    ||||||||||||||||||||||||||| | | | |||||| ||| ||||||||||||||||| || ||||| ||||| |||||||||| | |||||||||    
T  32618900 tgctctacattgagtattacactagagtatgaattaattttataaatgaaaaattttagaggaactaaaaatctaaaaaatattttagaaagactaaaat 32618999  T
Q  167 aaaatattggtatatttagggggactatttgcttatttaaccct 210  Q
     |||| ||| |||||||||  | ||||||| |||||||||||||    
T  32619000 caaatgttgatatatttagatgaactatttacttatttaaccct 32619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 4475243 - 4475108
Alignment:
Q  69 ctctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataa 168  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||| ||||| ||| |  |||| |||||||||||||||||| | | |||||| |    
T  4475243 ctctacattgattattacactagagctgg-actaatttcatagatgaaaatttttaaagg-attaaaaccctaaagaatattttaggggaattaaaatca 4475146  T
Q  169 aatattggtatatttagggggactatttgcttatttaa 206  Q
    ||| |||||||||||||| ||||| ||| |||||||||    
T  4475145 aatgttggtatatttaggaggactttttacttatttaa 4475108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 45405045 - 45405162
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    ||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| ||||||  ||     
T  45405045 ggactaatttcatagat-aaaaattttggagggactaaaagcctaaagaatattttagggggactaaaatcaaatgttagtatatttaaggggacagtta 45405143  T
Q  197 gcttatttaaccctaaaat 215  Q
     ||||||||||| ||||||    
T  45405144 acttatttaaccataaaat 45405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 30172181 - 30172069
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttg 197  Q
    |||||||||||| |||||||||||||  |   |||||||||||||||||||||||| | |||||||||| |||| ||| ||||||||||||||| ||||     
T  30172181 gactaatttcatggatgaaaaattttgtaaa-accaaaaacctaaagaatattttaaggggactaaaatcaaatgttgatatatttagggggaccattta 30172083  T
Q  198 cttatttaacccta 211  Q
    ||||||||||||||    
T  30172082 cttatttaacccta 30172069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 30430363 - 30430271
Alignment:
Q  116 aaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaacc 208  Q
    ||||||||||||||||||||| |||||||||||||||||  | |||||||| |||| ||||||||||||| ||||| |||| |||||||||||    
T  30430363 aaaattttagagggaccaaaagcctaaagaatattttagaggaactaaaatcaaatgttggtatatttagagggaccatttacttatttaacc 30430271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 210
Target Start/End: Original strand, 28725656 - 28725770
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattgg---tatatttagggggactat 194  Q
    |||||||||||| |||||||  |||| |||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||   ||||||||||||||| ||    
T  28725656 gactaatttcatggatgaaattttttggagggaccaaaaacctaatgaatattttggga-gactaaaatcaaatgttggtattatatttagggggaccat 28725754  T
Q  195 ttgcttatttaaccct 210  Q
    || |||||||||||||    
T  28725755 ttacttatttaaccct 28725770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 6931083 - 6931198
Alignment:
Q  96 gggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatt 195  Q
    ||||||||||||| | |||||||||||||||| || |||||||||||  ||| |||||   |||||||||| |||| || ||||||||| | ||||||||    
T  6931083 gggactaatttcaaaaatgaaaaattttagagagatcaaaaacctaagaaatgttttaaagggactaaaatcaaatgttagtatatttaagaggactatt 6931182  T
Q  196 tgcttatttaacccta 211  Q
    | ||||||||||||||    
T  6931183 tacttatttaacccta 6931198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 2928206 - 2928096
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||||  ||| |||||||| |||||||||||| ||||| ||| |||||||  |||||| ||| |||| |||||||||||||| |||| ||||    
T  2928206 ggactaatttcatgaatggaaaattttggagggaccaaaagcctaaggaaaattttagagggactagaatcaaatgttggtatatttaggaggaccattt 2928107  T
Q  197 gcttatttaac 207  Q
     ||||||||||    
T  2928106 acttatttaac 2928096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 4475249 - 4475363
Alignment:
Q  99 actaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgc 198  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||| ||||||    || |||||| |||| ||| |||||||||| | ||||||| |    
T  4475249 actaatttcatagataaaaaattttagaaggatcaaaaacctaaagaaaattttaaagtgattaaaatcaaatgttgatatatttaggagcactattttc 4475348  T
Q  199 ttatttaaccctaaa 213  Q
    | |||||||||||||    
T  4475349 taatttaaccctaaa 4475363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 43907867 - 43907976
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgctt 200  Q
    |||||| || |||||||||||||  ||| || ||||||||||| ||||||||||| |||||||||| ||||||| |||||||||  ||||  |||| |||    
T  43907867 taattttatggatgaaaaattttgaaggaacaaaaaacctaaaaaatattttagggggactaaaatcaaatattagtatattta-agggatcatttactt 43907965  T
Q  201 atttaacccta 211  Q
    |||||||||||    
T  43907966 atttaacccta 43907976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 10821941 - 10821868
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaat 171  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||| ||||||||| |  ||||||||||||||    
T  10821941 gactaatttcatagatgaaattttttagagggaccaaaagcctaaaaaatattttacggtgactaaaataaaat 10821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 44094272 - 44094174
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaat-attggtatatttagg 186  Q
    ||||| |||||||||||||||  || ||| |||||| ||||||||||| |||||  |||||||||| |||| |||||| ||||  ||||||||||||||    
T  44094272 tagagtagggactaatttcatgaataaaatattttaaagggaccaaaagcctaagaaatattttagaaggattaaaatcaaatgtttggtatatttagg 44094174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 44094286 - 44094391
Alignment:
Q  97 ggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatatttt-aggaggactaaaataaaatattggtatatttagggggactatt 195  Q
    ||||||||||||| ||| |||  |||| |||||||||||| |||||  |||||||| |||| ||||||||| |||| ||| |||||||| |||||| |||    
T  44094286 ggactaatttcatggataaaattttttggagggaccaaaaccctaagaaatattttcagga-gactaaaatcaaatgttgatatatttaaggggaccatt 44094384  T
Q  196 tgcttat 202  Q
    |||||||    
T  44094385 tgcttat 44094391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 8896009 - 8896098
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||||||||||||||  ||||||  ||||| || |||||||| | ||||||||||||||||  ||||||||| |||| ||||| ||||||    
T  8896009 agggactaatttcatgaatgaaattttttaaagagaccaaaagcttaaagaatattttagggagactaaaattaaatgttggtgtattta 8896098  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 27614084 - 27614008
Alignment:
Q  139 ctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaat 215  Q
    ||||||||||||||| |  ||||||||| |||| |||||||||||||||| ||||||| |||  ||||||| |||||    
T  27614084 ctaaagaatattttatggagactaaaattaaatgttggtatatttaggggaactatttacttgattaacccaaaaat 27614008  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 10821948 - 10822007
Alignment:
Q  71 ctacattgagtattacactagagcagggactaatttcatagatgaaaaattttagaggga 130  Q
    ||||||||  |||||||||| || || ||||||||||||| |||||||||||||||||||    
T  10821948 ctacattggatattacactacagtagagactaatttcatatatgaaaaattttagaggga 10822007  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 34502693 - 34502619
Alignment:
Q  118 aattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggact 192  Q
    |||||||||||||| |||| |||||| |||||||||   |||||||||| |||| ||| |||||||||| |||||    
T  34502693 aattttagagggacgaaaagcctaaaaaatattttatagggactaaaatcaaatgttgatatatttaggaggact 34502619  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 41993118 - 41993207
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||||||||||  ||| |||||   ||||||||||| ||||| |||||| |||||||||||  || |||||| |||||||| ||||||||    
T  41993118 agggactaattctataaatgaatttttttagagggatcaaaagcctaaaaaatattttagggagattaaaatcaaatattgatatattta 41993207  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 30430672 - 30430720
Alignment:
Q  158 gactaaaataaaatattggtatatttagggggactatttgcttatttaa 206  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||||    
T  30430672 gactaaaattaaatattgatatatttagggggaccatttacttatttaa 30430720  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 29491476 - 29491413
Alignment:
Q  101 taatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaat 166  Q
    ||||||||||| || |||||||| | |  ||||||||| |||||||||||||||| ||||||||||    
T  29491476 taatttcatagctggaaaattttggtg--accaaaaacataaagaatattttagggggactaaaat 29491413  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 34396901 - 34396939
Alignment:
Q  116 aaaattttagagggaccaaaaacctaaagaatattttag 154  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  34396901 aaaattttaaagggaccaaaaacctaaaaaatattttag 34396939  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 11096084 - 11096011
Alignment:
Q  111 gatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    |||| |||||||||||||||||||||  | || |||||||||||| |||| |||| ||||  | ||||||||||    
T  11096084 gatggaaaattttagagggaccaaaattcaaaggaatattttagggggaccaaaacaaaaattgggtatattta 11096011  T

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Target: scaffold0328 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 11586 - 11683
Alignment:
Q  89 tagagcagggactaatttcatagatgaaaaattttagag--ggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    ||||| || |||||||||||||||||||| |||||||||  |||||||||||||||  ||||||||||   ||||||||| ||||||| |||||||||    
T  11586 tagagaagagactaatttcatagatgaaatattttagagagggaccaaaaacctaagaaatattttagagtgactaaaatcaaatattcgtatattta 11683  T

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Target: scaffold0328; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 11137 - 11009
Alignment:
Q  81 tattacactagagcagggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtata 180  Q
    ||||| ||||||| |||||||||||||||| || ||||| ||||||| ||| ||||| |||||||||||||||   | |||||||| || | || |||||    
T  11137 tattatactagaggagggactaatttcataaataaaaaaatttagagagactaaaaatctaaagaatattttaaaggaactaaaatcaactgttagtata 11038  T
Q  181 tttagggggactatttgcttatttaaccct 210  Q
    |||| |   ||||||| |||||||||||||    
T  11037 ttta-gaatactatttacttatttaaccct 11009  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 27080 - 26994
Alignment:
Q  130 accaaaaacctaaagaatattttaggaggactaaaataaaatattggtatatttagggggactatttgcttatttaaccctaaaata 216  Q
    ||||||| |||||| |||||||||||||||||||||| |||  ||| |||||||||||| || ||||  |||||||| | |||||||    
T  27080 accaaaagcctaaataatattttaggaggactaaaattaaacgttgatatatttaggggaaccatttagttatttaagcttaaaata 26994  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 30700 - 30800
Alignment:
Q  95 agggactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaata-ttttaggaggactaaaataaaatattggtatatttagggggacta 193  Q
    |||||||||||| || |||||||| ||||||| ||||||||||| |||| |||| |||||||| ||||||||| |||| ||  |||||||| || |||||    
T  30700 agggactaatttgatggatgaaaatttttaga-ggaccaaaaacttaaataatatttttagga-gactaaaatcaaatgttattatatttaaggagacta 30797  T
Q  194 ttt 196  Q
    |||    
T  30798 ttt 30800  T

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Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 210
Target Start/End: Complemental strand, 30421 - 30310
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatatttt-aggaggactaaaataaaatattggtatatttagggggactattt 196  Q
    |||||||||||| |||||||  ||||||||| ||||||| | |||  |||||||| ||||| |||||||| |||| || ||||||||| |||||| |||     
T  30421 gactaatttcattgatgaaattttttagagg-accaaaagcttaagtaatatttttaggag-actaaaatcaaatgttagtatatttatggggaccattc 30324  T
Q  197 gcttatttaaccct 210  Q
     |||||||||||||    
T  30323 acttatttaaccct 30310  T

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Target: scaffold0577 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 1718 - 1647
Alignment:
Q  98 gactaatttcatagatgaaaaattttagagggaccaaaaacctaaagaatattttaggaggactaaaataaa 169  Q
    ||||||||||||  ||||||| ||||  ||||||||||| |||||  ||||||||||  |||||||||||||    
T  1718 gactaatttcatgaatgaaaatttttgaagggaccaaaagcctaattaatattttagagggactaaaataaa 1647  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 6354 - 6296
Alignment:
Q  126 agggaccaaaaacctaaagaatattttaggaggactaaaataaaatattggtatattta 184  Q
    ||||||||||| ||||||||||||||||| | || | |||| |||| ||||||||||||    
T  6354 agggaccaaaaccctaaagaatattttagaaagattgaaatcaaatgttggtatattta 6296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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