View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5584_low_41 (Length: 242)

Name: NF5584_low_41
Description: NF5584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5584_low_41
NF5584_low_41
[»] chr2 (43 HSPs)
chr2 (12-242)||(37767606-37767836)
chr2 (184-242)||(22966787-22966845)
chr2 (184-242)||(15123948-15124006)
chr2 (187-242)||(25507256-25507311)
chr2 (184-242)||(24727602-24727660)
chr2 (184-242)||(40106610-40106668)
chr2 (184-242)||(13453967-13454025)
chr2 (188-242)||(31629605-31629659)
chr2 (184-242)||(40874273-40874331)
chr2 (206-242)||(13711062-13711098)
chr2 (187-242)||(45376236-45376291)
chr2 (184-242)||(9979097-9979155)
chr2 (184-242)||(18423773-18423831)
chr2 (184-242)||(37731212-37731270)
chr2 (184-242)||(43820753-43820811)
chr2 (198-239)||(32900350-32900391)
chr2 (198-242)||(31227576-31227620)
chr2 (184-242)||(44977512-44977571)
chr2 (184-242)||(7258574-7258632)
chr2 (204-242)||(13553148-13553186)
chr2 (204-242)||(24766153-24766191)
chr2 (204-242)||(29168726-29168764)
chr2 (184-242)||(35334521-35334579)
chr2 (205-242)||(4738605-4738642)
chr2 (205-242)||(23690543-23690580)
chr2 (205-242)||(26321730-26321767)
chr2 (205-242)||(26321898-26321935)
chr2 (185-242)||(28544032-28544089)
chr2 (205-242)||(30856808-30856845)
chr2 (205-242)||(32749999-32750036)
chr2 (205-242)||(33296104-33296141)
chr2 (205-242)||(34442114-34442151)
chr2 (205-242)||(36435682-36435719)
chr2 (205-242)||(39247496-39247533)
chr2 (207-240)||(40602425-40602458)
chr2 (205-242)||(44189828-44189865)
chr2 (206-242)||(8482255-8482291)
chr2 (210-242)||(12600049-12600081)
chr2 (206-242)||(19695714-19695750)
chr2 (202-242)||(22303204-22303244)
chr2 (198-242)||(39234206-39234250)
chr2 (206-242)||(39285854-39285890)
chr2 (206-242)||(42081049-42081085)
[»] chr8 (41 HSPs)
chr8 (184-242)||(30170741-30170799)
chr8 (184-242)||(43066606-43066664)
chr8 (184-242)||(26629122-26629180)
chr8 (184-239)||(37379446-37379501)
chr8 (184-237)||(14127250-14127303)
chr8 (204-240)||(3547192-3547228)
chr8 (184-242)||(2730973-2731031)
chr8 (184-242)||(21526293-21526351)
chr8 (184-242)||(33605090-33605148)
chr8 (184-242)||(34435749-34435807)
chr8 (197-242)||(3155844-3155889)
chr8 (205-242)||(5740807-5740844)
chr8 (205-242)||(40842015-40842052)
chr8 (206-242)||(895935-895971)
chr8 (206-242)||(7678733-7678769)
chr8 (206-242)||(9047093-9047129)
chr8 (206-242)||(32020488-32020524)
chr8 (184-240)||(39031224-39031280)
chr8 (184-242)||(1068607-1068665)
chr8 (204-242)||(5849598-5849636)
chr8 (188-242)||(8835886-8835940)
chr8 (184-242)||(34018809-34018867)
chr8 (184-242)||(44061718-44061776)
chr8 (198-235)||(15116977-15117014)
chr8 (205-242)||(28927682-28927719)
chr8 (205-242)||(32725813-32725850)
chr8 (205-242)||(33107900-33107937)
chr8 (205-242)||(39021476-39021513)
chr8 (205-242)||(40102024-40102061)
chr8 (205-242)||(42716321-42716358)
chr8 (205-242)||(45101397-45101434)
chr8 (197-242)||(45108682-45108727)
chr8 (202-242)||(1158365-1158405)
chr8 (206-242)||(1796497-1796533)
chr8 (206-242)||(5502372-5502408)
chr8 (198-242)||(5771998-5772042)
chr8 (206-242)||(12732843-12732879)
chr8 (198-242)||(13592767-13592811)
chr8 (206-242)||(18538387-18538423)
chr8 (206-242)||(35500987-35501023)
chr8 (206-242)||(37392151-37392187)
[»] chr4 (40 HSPs)
chr4 (184-242)||(56215606-56215664)
chr4 (184-242)||(17367446-17367504)
chr4 (184-239)||(54222069-54222124)
chr4 (184-242)||(32871841-32871899)
chr4 (197-242)||(10762527-10762572)
chr4 (198-242)||(35206169-35206213)
chr4 (198-242)||(50831782-50831826)
chr4 (184-242)||(16531956-16532014)
chr4 (184-242)||(35748676-35748734)
chr4 (205-242)||(31240649-31240686)
chr4 (205-242)||(51318704-51318741)
chr4 (205-242)||(54800999-54801036)
chr4 (206-242)||(42490921-42490957)
chr4 (207-242)||(1031756-1031791)
chr4 (184-242)||(961277-961335)
chr4 (184-242)||(5932776-5932834)
chr4 (202-240)||(19899313-19899351)
chr4 (204-242)||(20632680-20632718)
chr4 (204-242)||(29227275-29227313)
chr4 (188-242)||(29963609-29963663)
chr4 (184-242)||(50506394-50506452)
chr4 (205-242)||(4896533-4896570)
chr4 (205-242)||(11064122-11064159)
chr4 (205-242)||(23220336-23220373)
chr4 (205-242)||(26885292-26885329)
chr4 (205-242)||(30973598-30973635)
chr4 (205-242)||(34116573-34116610)
chr4 (205-242)||(35332707-35332744)
chr4 (205-242)||(36444428-36444465)
chr4 (205-242)||(44925163-44925200)
chr4 (205-242)||(46794534-46794571)
chr4 (201-242)||(52372221-52372262)
chr4 (206-242)||(5234494-5234530)
chr4 (206-242)||(11997686-11997722)
chr4 (202-242)||(24088594-24088634)
chr4 (206-242)||(37547066-37547102)
chr4 (206-242)||(41119504-41119540)
chr4 (206-242)||(42915253-42915289)
chr4 (206-242)||(46173551-46173587)
chr4 (204-240)||(53190929-53190965)
[»] chr5 (33 HSPs)
chr5 (184-242)||(15004736-15004794)
chr5 (187-242)||(8728596-8728651)
chr5 (184-242)||(30838377-30838435)
chr5 (184-242)||(41621940-41621998)
chr5 (187-242)||(2629819-2629874)
chr5 (201-242)||(43057436-43057477)
chr5 (196-242)||(844037-844083)
chr5 (204-240)||(8097252-8097288)
chr5 (187-242)||(15022257-15022312)
chr5 (203-242)||(28811430-28811469)
chr5 (204-242)||(4719651-4719689)
chr5 (184-242)||(7144578-7144635)
chr5 (184-242)||(8675445-8675503)
chr5 (204-242)||(17097834-17097872)
chr5 (204-242)||(19844341-19844379)
chr5 (184-242)||(26754650-26754708)
chr5 (196-242)||(34270542-34270588)
chr5 (184-242)||(35098745-35098802)
chr5 (201-242)||(14780450-14780491)
chr5 (205-242)||(19376165-19376202)
chr5 (205-242)||(34381013-34381050)
chr5 (205-242)||(36581498-36581535)
chr5 (205-242)||(39595273-39595310)
chr5 (198-242)||(4800528-4800572)
chr5 (206-242)||(6865810-6865846)
chr5 (198-242)||(8681844-8681888)
chr5 (204-240)||(11464154-11464190)
chr5 (205-241)||(12910786-12910822)
chr5 (206-242)||(13734383-13734419)
chr5 (206-242)||(14206401-14206437)
chr5 (206-242)||(31683518-31683554)
chr5 (206-242)||(35814454-35814490)
chr5 (184-240)||(38097782-38097838)
[»] chr3 (35 HSPs)
chr3 (184-242)||(19623264-19623322)
chr3 (188-242)||(31143271-31143325)
chr3 (184-242)||(9326997-9327055)
chr3 (184-242)||(41442173-41442231)
chr3 (184-242)||(41448188-41448246)
chr3 (204-242)||(43499593-43499631)
chr3 (205-242)||(9027874-9027911)
chr3 (184-241)||(41850945-41851002)
chr3 (206-242)||(32457789-32457825)
chr3 (198-242)||(38017953-38017997)
chr3 (206-242)||(46952950-46952986)
chr3 (184-242)||(3282534-3282592)
chr3 (198-240)||(11323912-11323954)
chr3 (184-242)||(27198173-27198230)
chr3 (204-242)||(43409394-43409432)
chr3 (184-242)||(48405411-48405469)
chr3 (184-242)||(50559224-50559282)
chr3 (205-242)||(1901959-1901996)
chr3 (205-242)||(1911405-1911442)
chr3 (213-242)||(9719482-9719511)
chr3 (205-242)||(14957837-14957874)
chr3 (205-242)||(18169158-18169195)
chr3 (205-242)||(22813073-22813110)
chr3 (205-242)||(26279885-26279922)
chr3 (205-242)||(28300681-28300718)
chr3 (205-242)||(31176473-31176510)
chr3 (205-242)||(36799399-36799436)
chr3 (205-242)||(36869870-36869907)
chr3 (205-242)||(46315988-46316025)
chr3 (213-242)||(49457566-49457595)
chr3 (205-242)||(51464305-51464342)
chr3 (184-240)||(16139308-16139363)
chr3 (210-242)||(32687987-32688019)
chr3 (198-242)||(39284693-39284737)
chr3 (198-242)||(39901592-39901636)
[»] chr7 (38 HSPs)
chr7 (184-242)||(8352775-8352833)
chr7 (198-242)||(48395249-48395293)
chr7 (184-242)||(6892645-6892703)
chr7 (198-242)||(5068649-5068693)
chr7 (198-242)||(10700212-10700256)
chr7 (184-242)||(6427211-6427269)
chr7 (184-238)||(22588973-22589027)
chr7 (184-242)||(48314373-48314431)
chr7 (184-242)||(49069250-49069308)
chr7 (205-242)||(28109958-28109995)
chr7 (204-240)||(38259066-38259102)
chr7 (210-242)||(43025810-43025842)
chr7 (188-239)||(7714809-7714860)
chr7 (184-239)||(47925341-47925396)
chr7 (184-242)||(2008870-2008928)
chr7 (184-242)||(22692085-22692142)
chr7 (204-242)||(23910283-23910321)
chr7 (184-242)||(24680981-24681039)
chr7 (204-242)||(25614853-25614891)
chr7 (204-242)||(29763831-29763869)
chr7 (204-242)||(37173006-37173044)
chr7 (204-242)||(43079664-43079702)
chr7 (201-242)||(2849550-2849591)
chr7 (205-242)||(17500698-17500735)
chr7 (205-242)||(17552479-17552516)
chr7 (205-242)||(28824504-28824541)
chr7 (205-242)||(37392044-37392081)
chr7 (205-242)||(38023457-38023494)
chr7 (206-242)||(2469704-2469740)
chr7 (198-242)||(7212693-7212737)
chr7 (206-242)||(8459615-8459651)
chr7 (202-242)||(12141900-12141940)
chr7 (206-242)||(22330654-22330690)
chr7 (205-241)||(28596908-28596944)
chr7 (198-242)||(30818023-30818067)
chr7 (206-242)||(31785494-31785530)
chr7 (206-242)||(37352013-37352049)
chr7 (206-242)||(43444636-43444672)
[»] chr1 (36 HSPs)
chr1 (184-242)||(1523306-1523364)
chr1 (201-240)||(40434009-40434048)
chr1 (204-242)||(45333357-45333395)
chr1 (184-242)||(1922437-1922495)
chr1 (184-242)||(32821636-32821693)
chr1 (184-242)||(35883619-35883677)
chr1 (184-242)||(40809498-40809555)
chr1 (206-242)||(2362357-2362393)
chr1 (206-242)||(45272183-45272219)
chr1 (206-242)||(51571416-51571452)
chr1 (203-242)||(49425739-49425778)
chr1 (184-242)||(4213073-4213131)
chr1 (204-242)||(27352631-27352669)
chr1 (184-242)||(27742618-27742676)
chr1 (184-242)||(29706715-29706773)
chr1 (197-239)||(41619060-41619102)
chr1 (204-242)||(42843376-42843414)
chr1 (184-242)||(47642619-47642677)
chr1 (184-242)||(48858824-48858882)
chr1 (184-242)||(48872380-48872437)
chr1 (205-242)||(366658-366695)
chr1 (205-242)||(23554752-23554789)
chr1 (205-242)||(45740577-45740614)
chr1 (205-242)||(50226912-50226949)
chr1 (206-242)||(14983785-14983821)
chr1 (204-240)||(18639736-18639772)
chr1 (206-242)||(29264016-29264052)
chr1 (206-242)||(29489393-29489429)
chr1 (206-242)||(33675901-33675937)
chr1 (198-242)||(33694227-33694271)
chr1 (210-242)||(35335530-35335562)
chr1 (206-242)||(37843466-37843502)
chr1 (204-240)||(48261142-48261178)
chr1 (206-242)||(48872051-48872087)
chr1 (206-242)||(49453492-49453528)
chr1 (184-240)||(51231318-51231374)
[»] scaffold1625 (1 HSPs)
scaffold1625 (184-239)||(793-848)
[»] chr6 (18 HSPs)
chr6 (198-240)||(13093629-13093671)
chr6 (184-240)||(20029264-20029320)
chr6 (198-242)||(31883330-31883374)
chr6 (184-242)||(31204822-31204880)
chr6 (184-241)||(38598-38655)
chr6 (205-242)||(31517202-31517239)
chr6 (210-242)||(32253781-32253813)
chr6 (184-239)||(10840722-10840777)
chr6 (184-242)||(17551391-17551449)
chr6 (184-242)||(33712321-33712379)
chr6 (205-242)||(2241840-2241877)
chr6 (205-242)||(6435037-6435074)
chr6 (205-242)||(8173345-8173382)
chr6 (205-242)||(29383558-29383595)
chr6 (205-242)||(32457285-32457322)
chr6 (206-242)||(1196059-1196095)
chr6 (206-242)||(1897698-1897734)
chr6 (190-242)||(6256436-6256487)
[»] scaffold0110 (1 HSPs)
scaffold0110 (184-242)||(28339-28397)
[»] scaffold0514 (1 HSPs)
scaffold0514 (184-242)||(1858-1915)
[»] scaffold0011 (2 HSPs)
scaffold0011 (204-242)||(18596-18634)
scaffold0011 (205-242)||(219697-219734)
[»] scaffold0154 (1 HSPs)
scaffold0154 (205-242)||(4316-4353)
[»] scaffold0131 (1 HSPs)
scaffold0131 (205-242)||(15567-15604)
[»] scaffold0026 (1 HSPs)
scaffold0026 (205-242)||(113626-113663)
[»] scaffold0003 (2 HSPs)
scaffold0003 (205-242)||(88809-88846)
scaffold0003 (202-242)||(337119-337159)
[»] scaffold0194 (1 HSPs)
scaffold0194 (206-242)||(29795-29831)
[»] scaffold0086 (1 HSPs)
scaffold0086 (198-242)||(15857-15901)
[»] scaffold0054 (1 HSPs)
scaffold0054 (206-242)||(31623-31659)


Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 37767606 - 37767836
Alignment:
Q  12 catcatcagctagagggagaaataagtcaaataacatggttaaattaataannnnnnnagagaacatgattaaattaactatttattatacctaaaatct 111  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  37767606 catcatcagctagagggagaaataagtcgaataacatggttaaattaataacttttttagagaacatgattaaattaactatttattatacctaaaatct 37767705  T
Q  112 taactaatacatgaataaagtatgtgatactgcaattatctatttttgttgttgcgagaggattcaattatctatgagagagatgattgtttcaaaagtt 211  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37767706 taattaatacatgaataaagtatgtgatactgcaattatctatttttgttgttgcgagaggattcaattgtctatgagagagatgattgtttcaaaagtt 37767805  T
Q  212 atcaaaaagtggttgtacaaatatcatttct 242  Q
     |||||||||||||||| |||||||||||||    
T  37767806 gtcaaaaagtggttgtataaatatcatttct 37767836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 22966845 - 22966787
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  22966845 tatgagagagagggttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 22966787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 15123948 - 15124006
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  15123948 tatgagagatatgattgtttcaaaagttgtcaaaaaatggttgtacaaatatcatttct 15124006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 25507311 - 25507256
Alignment:
Q  187 gagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  25507311 gagagagagggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 25507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 24727602 - 24727660
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   |||||||||||||| ||||||||||||||||||||||||||||||    
T  24727602 tatgagagagagtgttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 24727660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 40106668 - 40106610
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  40106668 tatgagagagatggttgtttcataagttgtcaaagagtggttgtacaaatatcatttct 40106610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 13453967 - 13454025
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||| |||||||||||    
T  13453967 tatgagagagagaattgtttcaaaagttgtcaaaaagtgattgtacagatatcatttct 13454025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 31629659 - 31629605
Alignment:
Q  188 agagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||    
T  31629659 agagagatggttgttccaaaagttgtcaaaaagtagttgtacaaatatcatttct 31629605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 40874273 - 40874331
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||||||    
T  40874273 tatgagagacatggttgtttcaaaagttgttaaaaaatggttgtacaaatatcatttct 40874331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 13711098 - 13711062
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||||||||||||||||    
T  13711098 aaagttatcaaaaagtggttgtacaaatatcatttct 13711062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 45376236 - 45376291
Alignment:
Q  187 gagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| | ||||  |||||||| ||||||||||||||||||||||||||||||    
T  45376236 gagagagagggttgtcacaaaagttgtcaaaaagtggttgtacaaatatcatttct 45376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 9979155 - 9979097
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||| ||||  ||||| || | ||||||||||||||||||||||||||||    
T  9979155 tatgagagagatggttgtcacaaaaattgtgaaaaagtggttgtacaaatatcatttct 9979097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 18423773 - 18423831
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| ||||||||||| ||||| ||||||||| | | ||||||||||||||||||    
T  18423773 tatgagagtgatgattgttttaaaagatatcaaaaaatagatgtacaaatatcatttct 18423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 37731212 - 37731270
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||  |||||||| ||||||||||||||| ||||||||||||||    
T  37731212 tatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 37731270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 43820753 - 43820811
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||| |||||||||||||| | ||||| || |||||||||||||||||||    
T  43820753 tatgagaaagatggttgtttcaaaagttgtaaaaaaatgattgtacaaatatcatttct 43820811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 32900350 - 32900391
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  32900350 ttgtttcaaaagttattacaaagtggttgtacaaatatcatt 32900391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 31227576 - 31227620
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||    
T  31227576 ttgtttcaaaagttgtcaaaaagtgattgtacacatatcatttct 31227620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 44977512 - 44977571
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaag-tggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||| |||||||| |||||||| |||||||| |||||||||||||    
T  44977512 tatgagagagaaaattgttacaaaagttgtcaaaaagatggttgtataaatatcatttct 44977571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 7258574 - 7258632
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||| |||||||| ||||| |||| |||||||||| ||||||||    
T  7258574 tatgagagagaaaattgttacaaaagttgtcaaagagtgattgtacaaatgtcatttct 7258632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 13553186 - 13553148
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  13553186 caaaaattatcacaaagtggttgtacaaatatcatttct 13553148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 24766191 - 24766153
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  24766191 caaaagttattaaaaaatggttgtacaaatatcatttct 24766153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 29168764 - 29168726
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  29168764 caaaagttgtcaaaaaatggttgtacaaatatcatttct 29168726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 35334579 - 35334521
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| |  |||||| |||||||||| | ||| ||||||||||||||||||||||    
T  35334579 tatgagagaaagaattgttacaaaagttattataaaatggttgtacaaatatcatttct 35334521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 4738605 - 4738642
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4738605 aaaagttgtcacaaagtggttgtacaaatatcatttct 4738642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 23690543 - 23690580
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  23690543 aaaagttgtcaaaaagtggttgtactaatatcatttct 23690580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 26321730 - 26321767
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  26321730 aaaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 26321898 - 26321935
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  26321898 aaaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 28544089 - 28544032
Alignment:
Q  185 atgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| ||||  |||||||| | ||||| |||| |||||||||||||||||    
T  28544089 atgagagagatggttgtcacaaaagttgtgaaaaaatggtagtacaaatatcatttct 28544032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 30856845 - 30856808
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  30856845 aaaagttgtcacaaagtggttgtacaaatatcatttct 30856808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 32750036 - 32749999
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  32750036 aaaagttgtgaaaaagtggttgtacaaatatcatttct 32749999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 33296104 - 33296141
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  33296104 aaaagttgtcacaaagtggttgtacaaatatcatttct 33296141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 34442151 - 34442114
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  34442151 aaaaattatcataaagtggttgtacaaatatcatttct 34442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 36435719 - 36435682
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  36435719 aaaagttgtcacaaagtggttgtacaaatatcatttct 36435682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 39247496 - 39247533
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  39247496 aaaagttatcacaaaatggttgtacaaatatcatttct 39247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 40602425 - 40602458
Alignment:
Q  207 aagttatcaaaaagtggttgtacaaatatcattt 240  Q
    ||||| ||||||||||||||||||||||||||||    
T  40602425 aagttgtcaaaaagtggttgtacaaatatcattt 40602458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 44189865 - 44189828
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  44189865 aaaagttgtcataaagtggttgtacaaatatcatttct 44189828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 8482255 - 8482291
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  8482255 aaagttgtcataaagtggttgtacaaatatcatttct 8482291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 12600081 - 12600049
Alignment:
Q  210 ttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||    
T  12600081 ttatcacaaagtggttgtacaaatatcatttct 12600049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 19695714 - 19695750
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| |||||||||| |||||||||||||||||||    
T  19695714 aaagttgtcaaaaagtgattgtacaaatatcatttct 19695750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 22303244 - 22303204
Alignment:
Q  202 ttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||| ||||||| | ||||||||||||||||||||    
T  22303244 ttcaaaagttgtcaaaaaatagttgtacaaatatcatttct 22303204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 39234206 - 39234250
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||||||||||||| ||||||| |||||||| |||||    
T  39234206 ttgttgcaaaagttatcaaaaaatggttgttcaaatatcgtttct 39234250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 39285890 - 39285854
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| |||||||||| |||||||||||||||||||    
T  39285890 aaagttgtcaaaaagtgattgtacaaatatcatttct 39285854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 42081085 - 42081049
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  42081085 aaagttgtcaaaaagtggctgtacaaatatcatttct 42081049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 30170741 - 30170799
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  30170741 tatgagagagatggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 30170799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 43066606 - 43066664
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  43066606 tatgagagagatgattgtttcaaaagttgttaaaaagtggttgtacaaatatcatttct 43066664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 26629122 - 26629180
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  26629122 tatgagagagagggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 26629180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 37379446 - 37379501
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  37379446 tatgagagagatggttgtttcaaaagttgtcaaaaagtggttctacaaatatcatt 37379501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 14127303 - 14127250
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatca 237  Q
    ||||||||||||| ||||| ||||| || |||||||||||||||||||||||||    
T  14127303 tatgagagagatggttgttccaaaaattgtcaaaaagtggttgtacaaatatca 14127250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 3547192 - 3547228
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||||||||||||||||||||||||||||    
T  3547192 caaaagttatcaaaaagtggttgtacaaatatcattt 3547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 2730973 - 2731031
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  2730973 tatgagagagaaagttgttacaaaagttgtcaaaaagtggttgttcaaatatcatttct 2731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 21526293 - 21526351
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  | |||| |||||||| | ||||||||||||||||||||||||||||    
T  21526293 tatgagagagaaaactgttacaaaagttgttaaaaagtggttgtacaaatatcatttct 21526351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 33605090 - 33605148
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||| |||||||||||| ||| ||||||| ||||||||||||||    
T  33605090 tatgagagagaaaattgttccaaaagttatcataaaatggttgttcaaatatcatttct 33605148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 34435749 - 34435807
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||  |||||||| ||||||||||||||| ||||||||||||||    
T  34435749 tatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 34435807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 3155889 - 3155844
Alignment:
Q  197 attgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||    
T  3155889 attgttccaaaagttgttaaaaagtggttgtacaaatatcatttct 3155844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 5740807 - 5740844
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  5740807 aaaagttgtcaaaaagtggttgtacaaatatcatttct 5740844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 40842052 - 40842015
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  40842052 aaaagttatcacaaagtggttgtacaaatatcatttct 40842015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 895971 - 895935
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||||||    
T  895971 aaagttgtcaaaaagtggttgtacaaatatcatttct 895935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 7678769 - 7678733
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7678769 aaagttgtcaaaaagtggttgtacaaatatcatttct 7678733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 9047093 - 9047129
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9047093 aaagttgtcaaaaagtggttgtacaaatatcatttct 9047129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 32020488 - 32020524
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||| ||||||||||||||||||||||    
T  32020488 aaagttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 39031224 - 39031280
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||  ||||||||||||||||| ||||| |  |||||||||||||||||    
T  39031224 tatgagagagaaaattgtttcaaaagttataaaaaaataattgtacaaatatcattt 39031280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 1068665 - 1068607
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||| ||||||||||||||| ||||||||||||||    
T  1068665 tatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 1068607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 5849598 - 5849636
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  5849598 caaaagttatcaaaaaatggttgttcaaatatcatttct 5849636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 8835886 - 8835940
Alignment:
Q  188 agagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| | |||||| ||||||| |||||||||| | |||||||||||||||||    
T  8835886 agagagagggttgttttaaaagttgtcaaaaagtgatcgtacaaatatcatttct 8835940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 34018867 - 34018809
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||| |||||||| ||| ||| ||||||| ||||||||||||||    
T  34018867 tatgagagagaaaattgttgcaaaagttgtcagaaaatggttgttcaaatatcatttct 34018809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 44061776 - 44061718
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||||||||||| ||||||| ||||||||||||||    
T  44061776 tatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 44061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 15116977 - 15117014
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatat 235  Q
    |||||||||||||| | |||||||||||||||||||||    
T  15116977 ttgtttcaaaagttgttaaaaagtggttgtacaaatat 15117014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 28927719 - 28927682
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  28927719 aaaagttgtcacaaagtggttgtacaaatatcatttct 28927682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 32725813 - 32725850
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  32725813 aaaaattatcacaaagtggttgtacaaatatcatttct 32725850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 33107900 - 33107937
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  33107900 aaaagttgtcaaaaagtggttgttcaaatatcatttct 33107937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 39021476 - 39021513
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  39021476 aaaagttatcacaaaatggttgtacaaatatcatttct 39021513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 40102061 - 40102024
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  40102061 aaaagttgtgaaaaagtggttgtacaaatatcatttct 40102024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 42716358 - 42716321
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  42716358 aaaaattatgaaaaagtggttgtacaaatatcatttct 42716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 45101434 - 45101397
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  45101434 aaaagttgtcacaaagtggttgtacaaatatcatttct 45101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 45108682 - 45108727
Alignment:
Q  197 attgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||| ||||||| | | ||||||||||||||||||    
T  45108682 attgtttcaaaagttgtcaaaaaatagatgtacaaatatcatttct 45108727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 1158365 - 1158405
Alignment:
Q  202 ttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| | ||| ||||||||||||||||||||||    
T  1158365 ttcaaaagttattagaaattggttgtacaaatatcatttct 1158405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 1796533 - 1796497
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  1796533 aaagttgtcacaaagtggttgtacaaatatcatttct 1796497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 5502408 - 5502372
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  5502408 aaagttgtcacaaagtggttgtacaaatatcatttct 5502372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 5771998 - 5772042
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  5771998 ttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttct 5772042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 12732879 - 12732843
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  12732879 aaagttgtcacaaagtggttgtacaaatatcatttct 12732843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 13592811 - 13592767
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||    
T  13592811 ttgtttcaaaagttgtcaaaaaataggtgtacaaatatcatttct 13592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 18538423 - 18538387
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  18538423 aaagttgtcaaaaagtggttgtacaagtatcatttct 18538387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 35500987 - 35501023
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| |||||||||||||||| |||||||||||||    
T  35500987 aaagttgtcaaaaagtggttgtataaatatcatttct 35501023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 37392151 - 37392187
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  37392151 aaagttgtcaaaaaatggttgtacaaatatcatttct 37392187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 56215664 - 56215606
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  56215664 tatgagagagatgattggttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 56215606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 17367504 - 17367446
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  17367504 tatgagagagatggttgtttcaaaagttgtcaaaaagtggttgtataaatatcatttct 17367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 54222069 - 54222124
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    ||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||    
T  54222069 tatgagagacatgattgttccaaaagttgttaaaaagtggttgtacaaatatcatt 54222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 32871841 - 32871899
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||||||| |||| || | || |||||||||||||||||    
T  32871841 tatgagagagatgattgtttcaaaagttgtcaagaaatagtggtacaaatatcatttct 32871899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 10762527 - 10762572
Alignment:
Q  197 attgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||    
T  10762527 attgtttcaaaagttatcaaaaagtagttgtataaatatcatttct 10762572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 35206213 - 35206169
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  35206213 ttgtttcaaaagttatcaaaaagtgattgtacaaacatcatttct 35206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 50831782 - 50831826
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  50831782 ttgttacaaaagttgtcaaaaagtggttgtacaaatatcatttct 50831826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 16531956 - 16532014
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| |||| ||||||||| |||||||||  |||||||||||||| ||||||    
T  16531956 tatgagagagaagattatttcaaaagatatcaaaaaagggttgtacaaatataatttct 16532014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 35748676 - 35748734
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| ||||||||| ||||| |||||||||||| ||||| |||||| |||||||    
T  35748676 tatgagagatatgattgttccaaaaattatcaaaaagtagttgtgcaaataacatttct 35748734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 31240686 - 31240649
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  31240686 aaaagttatcacaaagtggttgtacaaatatcatttct 31240649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 51318741 - 51318704
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  51318741 aaaagttatcacaaagtggttgtacaaatatcatttct 51318704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 54801036 - 54800999
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  54801036 aaaagttatcacaaagtggttgtacaaatatcatttct 54800999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 42490957 - 42490921
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||||||    
T  42490957 aaagttgtcaaaaagtggttgtacaaatatcatttct 42490921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 242
Target Start/End: Complemental strand, 1031791 - 1031756
Alignment:
Q  207 aagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1031791 aagttatcacaaagtggttgtacaaatatcatttct 1031756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 961335 - 961277
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   |||||||||||||||||||||| |  |||||||||||| ||||||    
T  961335 tatgagagagagagttgtttcaaaagttatcaaaaaattattgtacaaatattatttct 961277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 5932776 - 5932834
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||| ||||||||||||||| ||||||||||||||    
T  5932776 tatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 5932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 19899351 - 19899313
Alignment:
Q  202 ttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  19899351 ttcaaaagttgttaaaaagtggttgtacaaatatcattt 19899313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 20632680 - 20632718
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  20632680 caaaagttatcaaaaaatggttgtataaatatcatttct 20632718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 29227275 - 29227313
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  29227275 caaaaattatcaaaaagtggttgttcaaatatcatttct 29227313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 29963663 - 29963609
Alignment:
Q  188 agagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||| |||||||||   |||| ||||||| |||||    
T  29963663 agagagatgattgtttcaaaagttgtcaaaaagtatatgtataaatatcgtttct 29963609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 50506452 - 50506394
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  ||| | |||||| |||||||||| ||||||| ||||||||||||||    
T  50506452 tatgagagagaaaattatctcaaaaattatcaaaaaatggttgttcaaatatcatttct 50506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 4896533 - 4896570
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4896533 aaaagttgtcacaaagtggttgtacaaatatcatttct 4896570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 11064122 - 11064159
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  11064122 aaaagttgtcacaaagtggttgtacaaatatcatttct 11064159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 23220373 - 23220336
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  23220373 aaaagttgtcaaaaaatggttgtacaaatatcatttct 23220336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 26885329 - 26885292
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  26885329 aaaagttgtcacaaagtggttgtacaaatatcatttct 26885292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 30973635 - 30973598
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  30973635 aaaagttgtcataaagtggttgtacaaatatcatttct 30973598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 34116573 - 34116610
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  34116573 aaaagttgtcacaaagtggttgtacaaatatcatttct 34116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 35332744 - 35332707
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  35332744 aaaaattatcataaagtggttgtacaaatatcatttct 35332707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 36444428 - 36444465
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  36444428 aaaagttatcataaaatggttgtacaaatatcatttct 36444465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 44925163 - 44925200
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  44925163 aaaagttgtcaaaaagtggttgttcaaatatcatttct 44925200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 46794534 - 46794571
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  46794534 aaaagttgtcagaaagtggttgtacaaatatcatttct 46794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 52372221 - 52372262
Alignment:
Q  201 tttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||| |  |||||||||||||||||||    
T  52372221 tttcaaaagttatcaaaaattaattgtacaaatatcatttct 52372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 5234494 - 5234530
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||| |||||| |||||||||||||||||||    
T  5234494 aaagttatcacaaagtgattgtacaaatatcatttct 5234530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 11997722 - 11997686
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  11997722 aaagttgtcacaaagtggttgtacaaatatcatttct 11997686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 24088594 - 24088634
Alignment:
Q  202 ttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  24088594 ttcaaaagttgtcataaaatggttgtacaaatatcatttct 24088634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 37547102 - 37547066
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  37547102 aaagttgtcacaaagtggttgtacaaatatcatttct 37547066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 41119504 - 41119540
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  41119504 aaagttgtcacaaagtggttgtacaaatatcatttct 41119540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 42915253 - 42915289
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| |||||||||| |||||||||||||||||||    
T  42915253 aaagttgtcaaaaagtgattgtacaaatatcatttct 42915289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 46173587 - 46173551
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  46173587 aaagttgtcacaaagtggttgtacaaatatcatttct 46173551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 53190965 - 53190929
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||| | ||||||||||||||||||||||||||    
T  53190965 caaaagttgttaaaaagtggttgtacaaatatcattt 53190929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 15004736 - 15004794
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  15004736 tatgagagagatgattgtttcaaaaattgtcaaaaagtggttgtccaaatatcatttct 15004794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 8728596 - 8728651
Alignment:
Q  187 gagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  8728596 gagagagagggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 8728651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 30838377 - 30838435
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||    
T  30838377 tatgagagagatggttgtttcaaaagttgtcaaaaagtagatgtacaaatatcatttct 30838435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 41621940 - 41621998
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||    
T  41621940 tatgagagatgtggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 41621998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 2629874 - 2629819
Alignment:
Q  187 gagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||    
T  2629874 gagagagaaggttgtttcaaaagttgtcaaaaaatggttgtacaaatatcatttct 2629819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 43057477 - 43057436
Alignment:
Q  201 tttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  43057477 tttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 43057436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 844083 - 844037
Alignment:
Q  196 gattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  844083 gattgtttcaaaagttgtcaaaaaatggttgtgcaaatatcatttct 844037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 8097288 - 8097252
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||||||| ||||||||||||||||||||    
T  8097288 caaaagttatcaaaaattggttgtacaaatatcattt 8097252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 15022257 - 15022312
Alignment:
Q  187 gagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| ||| |||||||||||||||| ||||||||||||| | ||||||| ||||||    
T  15022257 gagaaagaggattgtttcaaaagttgtcaaaaagtggttttccaaatattatttct 15022312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 28811469 - 28811430
Alignment:
Q  203 tcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  28811469 tcaaaagttgtcacaaagtggttgtacaaatatcatttct 28811430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 4719689 - 4719651
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  4719689 caaaagttgtcaaaaattggttgtacaaatatcatttct 4719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 7144635 - 7144578
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   |||||| ||||||||||| ||| ||||||||||||||||||||||    
T  7144635 tatgagagagaaagttgttt-aaaagttatcataaaatggttgtacaaatatcatttct 7144578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 8675445 - 8675503
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||| |||||||||||| ||| ||| ||| ||||||||||||||    
T  8675445 tatgagagagaaaattgttgcaaaagttatcacaaaatggatgttcaaatatcatttct 8675503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 17097834 - 17097872
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  17097834 caaaagttatcaaaaaatggttgttcaaatatcatttct 17097872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 19844341 - 19844379
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  19844341 caaaagttatcaaaaaatagttgtacaaatatcatttct 19844379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 26754650 - 26754708
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||| || |||||| ||||||  ||||||||||||||||||||||    
T  26754650 tatgagagagagggttgtctccaaagttgtcaaaatttggttgtacaaatatcatttct 26754708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 34270542 - 34270588
Alignment:
Q  196 gattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  34270542 gattgtttcaaaagttgttaaaaatttgttgtacaaatatcatttct 34270588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 35098745 - 35098802
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| |  ||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  35098745 tatgagagaaaaaattgttt-aaatgttatcaaaaaatggttgtacaaatatcatttct 35098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 14780450 - 14780491
Alignment:
Q  201 tttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  14780450 tttcaaaagttgtcaaaaagtagatgtacaaatatcatttct 14780491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 19376165 - 19376202
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  19376165 aaaagttgtcagaaagtggttgtacaaatatcatttct 19376202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 34381050 - 34381013
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  34381050 aaaagttgtcacaaagtggttgtacaaatatcatttct 34381013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 36581498 - 36581535
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  36581498 aaaaattatcacaaagtggttgtacaaatatcatttct 36581535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 39595310 - 39595273
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  39595310 aaaagttgtcacaaagtggttgtacaaatatcatttct 39595273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 4800528 - 4800572
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||||| ||||||||| |||||| |||||||||||||    
T  4800528 ttgttccaaaagttgtcaaaaagtagttgtataaatatcatttct 4800572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 6865810 - 6865846
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  6865810 aaagttgtcacaaagtggttgtacaaatatcatttct 6865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 8681888 - 8681844
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| ||||| |||||||||| || |||||||||||||||||||    
T  8681888 ttgttccaaaaattatcaaaaaatgattgtacaaatatcatttct 8681844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 11464154 - 11464190
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  11464154 caaaagttatcacaaattggttgtacaaatatcattt 11464190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 12910822 - 12910786
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttc 241  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  12910822 aaaagttgtcacaaagtggttgtacaaatatcatttc 12910786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 13734383 - 13734419
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  13734383 aaagttgtcataaagtggttgtacaaatatcatttct 13734419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 14206437 - 14206401
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  14206437 aaagttgtcaaaaaatggttgtacaaatatcatttct 14206401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 31683518 - 31683554
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  31683518 aaagttatcaaaaagtggttgttcaaatgtcatttct 31683554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 35814490 - 35814454
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  35814490 aaagttatcacaaaatggttgtacaaatatcatttct 35814454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 38097838 - 38097782
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||| ||||||||||||||| | ||||| |  ||||||| |||||||||    
T  38097838 tatgagagagataattgtttcaaaagttgttaaaaaataattgtacagatatcattt 38097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 19623264 - 19623322
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  19623264 tatgagagagattattgttttaaaagttatcaaaaagtgattgtacaaatatcatttct 19623322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 31143325 - 31143271
Alignment:
Q  188 agagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||| ||||    
T  31143325 agagagatgattgtttcaaaagttgtcaaaaaatgattgtacaaatatcacttct 31143271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 9326997 - 9327055
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||| |||||||||||||| || |||| || |||||||||||||||||||    
T  9326997 tatgagatagatggttgtttcaaaagttgtcgaaaattgattgtacaaatatcatttct 9327055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 41442231 - 41442173
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||||  ||||||||||||||| |||||||||||||| |||||||    
T  41442231 tatgagagagaaggttgttgtaaaagttatcaaaaaatggttgtacaaataccatttct 41442173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 41448188 - 41448246
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||||||||||||| |  |||| ||||||||||||||||||||||    
T  41448188 tatgagagagagggttgtttcaaaagttgtttaaaaatggttgtacaaatatcatttct 41448246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 43499593 - 43499631
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  43499593 caaaagttatcataaagtggttgtacaaatatcatttct 43499631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 9027911 - 9027874
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9027911 aaaagttatcacaaagtggttgtacaaatatcatttct 9027874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 41851002 - 41850945
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttc 241  Q
    |||||||| || | |||||||||||||| ||||||  |||||||||||||||||||||    
T  41851002 tatgagagggagggttgtttcaaaagttgtcaaaatatggttgtacaaatatcatttc 41850945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 32457789 - 32457825
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32457789 aaagttgtcaaaaagtggttgtacaaatatcatttct 32457825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 38017953 - 38017997
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  38017953 ttgtttcataagttgtcaaagagtggttgtacaaatatcatttct 38017997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 46952986 - 46952950
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||| ||||||||||||||||||||||    
T  46952986 aaagttatcaaaaaatggttgtacaaatatcatttct 46952950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 3282592 - 3282534
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| |||| ||||||||||||||| ||||||| |  || ||||||||||||||||    
T  3282592 tatgagaaagataattgtttcaaaagttgtcaaaaaatacttatacaaatatcatttct 3282534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 11323954 - 11323912
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||| ||||||||| | ||||||||||||||||||||||||||    
T  11323954 ttgtatcaaaagttgttaaaaagtggttgtacaaatatcattt 11323912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 27198173 - 27198230
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| |  ||||||| ||||||||||||||| || |||||||||||||||||||    
T  27198173 tatgagagataaaattgttt-aaaagttatcaaaaaatgattgtacaaatatcatttct 27198230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 43409394 - 43409432
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  43409394 caaaaattatcacaaagtggttgtacaaatatcatttct 43409432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 48405469 - 48405411
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||| |||||||| ||| ||| ||||||||||||||||||||||    
T  48405469 tatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttct 48405411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 50559224 - 50559282
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  |||||  |||||||| ||||||| | ||||||||||||||||||||    
T  50559224 tatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttct 50559282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 1901959 - 1901996
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  1901959 aaaagttgtcacaaagtggttgtacaaatatcatttct 1901996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 1911405 - 1911442
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  1911405 aaaagttgtcacaaagtggttgtacaaatatcatttct 1911442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 9719482 - 9719511
Alignment:
Q  213 tcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||||||||||||||    
T  9719482 tcaaaaagtggttgtacaaatatcatttct 9719511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 14957874 - 14957837
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  14957874 aaaagttgtcacaaagtggttgtacaaatatcatttct 14957837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 18169195 - 18169158
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  18169195 aaaagttgtcacaaagtggttgtacaaatatcatttct 18169158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 22813110 - 22813073
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  22813110 aaaagttgtcagaaagtggttgtacaaatatcatttct 22813073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 26279922 - 26279885
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  26279922 aaaagttgtcagaaagtggttgtacaaatatcatttct 26279885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 28300681 - 28300718
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  28300681 aaaagttgtcataaagtggttgtacaaatatcatttct 28300718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 31176473 - 31176510
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  31176473 aaaaattatcacaaagtggttgtacaaatatcatttct 31176510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 36799436 - 36799399
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  36799436 aaaagttatcaaaaaatagttgtacaaatatcatttct 36799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 36869870 - 36869907
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  36869870 aaaagttgtcaaaaaatggttgtacaaatatcatttct 36869907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 46315988 - 46316025
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  46315988 aaaagttgtcataaagtggttgtacaaatatcatttct 46316025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 49457595 - 49457566
Alignment:
Q  213 tcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||||||||||||||    
T  49457595 tcaaaaagtggttgtacaaatatcatttct 49457566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 51464305 - 51464342
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  51464305 aaaagttgtcacaaagtggttgtacaaatatcatttct 51464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 16139308 - 16139363
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||  |||||| |||||||||||| ||| ||||||||||||||| ||||    
T  16139308 tatgagagagaaaattgtt-caaaagttatcataaaatggttgtacaaatattattt 16139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 32687987 - 32688019
Alignment:
Q  210 ttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| |||||||||||||||||||||||    
T  32687987 ttatcaaaaggtggttgtacaaatatcatttct 32688019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 39284693 - 39284737
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||| ||||||||||  | ||||||||||||||||    
T  39284693 ttgtttcaaaagttgtcaaaaagtgaatatacaaatatcatttct 39284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 39901636 - 39901592
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| ||||| |||||||||| || |||||||||||||||||||    
T  39901636 ttgttccaaaaattatcaaaaaatgattgtacaaatatcatttct 39901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 8352833 - 8352775
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||    
T  8352833 tatgagagagatggttgtttcaaaaattgtcaaaaagtggttgtataaatatcatttct 8352775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 48395293 - 48395249
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  48395293 ttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttct 48395249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 6892645 - 6892703
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  6892645 tatgagagagagggttgtttcataagttgtcaaagagtggttgtacaaatatcatttct 6892703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 5068649 - 5068693
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  5068649 ttgtttcaaaagttatcataaaatggttgtacaaatatcatttct 5068693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 10700212 - 10700256
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||    
T  10700212 ttgttacaaaagttatcaaaaagtggttgtgcaaatatcatttct 10700256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 6427269 - 6427211
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||||  ||||||| |||||||||||||||| |||||||||||||    
T  6427269 tatgagagagagggttgttctaaaagttgtcaaaaagtggttgtataaatatcatttct 6427211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 22588973 - 22589027
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcat 238  Q
    ||||||||||  | |||||||||||||| ||||||| ||||||||||||||||||    
T  22588973 tatgagagagggggttgtttcaaaagttgtcaaaaaatggttgtacaaatatcat 22589027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 48314373 - 48314431
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||||  ||||||| | ||||||||||||||||||||||||||||    
T  48314373 tatgagagagagggttgttgtaaaagttgttaaaaagtggttgtacaaatatcatttct 48314431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 49069308 - 49069250
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  ||| |  |||||||| ||||||||||||||||||||||||||||||    
T  49069308 tatgagagagaaaattatcacaaaagttgtcaaaaagtggttgtacaaatatcatttct 49069250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 28109995 - 28109958
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  28109995 aaaagttgtcaaaaagtggttgtacaaatatcatttct 28109958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 38259102 - 38259066
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||||||| ||||||||||||||||||||    
T  38259102 caaaagttatcaaaaaatggttgtacaaatatcattt 38259066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 43025842 - 43025810
Alignment:
Q  210 ttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||||||||||||    
T  43025842 ttatcaaaaagtggttgtacaaatatcatttct 43025810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 7714809 - 7714860
Alignment:
Q  188 agagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    |||||||  |||||| ||||| || |||||||||||||||||||||||||||    
T  7714809 agagagagaattgttccaaaaattgtcaaaaagtggttgtacaaatatcatt 7714860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 47925396 - 47925341
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    ||||||||||| | ||||| |||||||| | ||| |||||||||||||||||||||    
T  47925396 tatgagagagagggttgttccaaaagttgttaaagagtggttgtacaaatatcatt 47925341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 2008870 - 2008928
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||| ||||||||||||||| ||||||||||||||    
T  2008870 tatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 2008928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 22692142 - 22692085
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  ||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  22692142 tatgagagagaaaattgttt-aaaagttgtcataaaatggttgtacaaatatcatttct 22692085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 23910283 - 23910321
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  23910283 caaaagttgtcaaaaaatggttgtacaaatatcatttct 23910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 24680981 - 24681039
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||  |||||||||| | ||| ||||| ||||||||||||||||    
T  24680981 tatgagagagaggattgtcccaaaagttataagaaaatggttatacaaatatcatttct 24681039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 25614853 - 25614891
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  25614853 caaaagttatcaaaaaatggatgtacaaatatcatttct 25614891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 29763869 - 29763831
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  29763869 caaaagttatcacaaaatggttgtacaaatatcatttct 29763831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 37173006 - 37173044
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  37173006 caaaagttatcacaaattggttgtacaaatatcatttct 37173044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 43079664 - 43079702
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  43079664 caaaaattatcacaaagtggttgtacaaatatcatttct 43079702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 2849550 - 2849591
Alignment:
Q  201 tttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||| |  |||||||||||||||||||    
T  2849550 tttcaaaagttatcaaaaaataattgtacaaatatcatttct 2849591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 17500735 - 17500698
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  17500735 aaaagttataataaagtggttgtacaaatatcatttct 17500698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 17552479 - 17552516
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  17552479 aaaagttataataaagtggttgtacaaatatcatttct 17552516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 28824541 - 28824504
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  28824541 aaaagttgtcagaaagtggttgtacaaatatcatttct 28824504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 37392081 - 37392044
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  37392081 aaaagttgtcaaaaaatggttgtacaaatatcatttct 37392044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 38023457 - 38023494
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  38023457 aaaaattatcacaaagtggttgtacaaatatcatttct 38023494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 2469740 - 2469704
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  2469740 aaagttgtcacaaagtggttgtacaaatatcatttct 2469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 7212693 - 7212737
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||| | ||||||| ||||||||||||||||||||    
T  7212693 ttgttttaaaagttgtgaaaaagtagttgtacaaatatcatttct 7212737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 8459651 - 8459615
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| | ||||||||||||||||||||||||||||    
T  8459651 aaagttgttaaaaagtggttgtacaaatatcatttct 8459615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 12141940 - 12141900
Alignment:
Q  202 ttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||| ||| ||||||||||||||| ||||||    
T  12141940 ttcaaaagttatcacaaaatggttgtacaaatatgatttct 12141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 22330654 - 22330690
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  22330654 aaagttgtcacaaagtggttgtacaaatatcatttct 22330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 28596944 - 28596908
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttc 241  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  28596944 aaaagttgtcacaaagtggttgtacaaatatcatttc 28596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 30818023 - 30818067
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  30818023 ttgtctcaaaagttgtcataaaatggttgtacaaatatcatttct 30818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 31785494 - 31785530
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  31785494 aaagttttcataaagtggttgtacaaatatcatttct 31785530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 37352013 - 37352049
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  37352013 aaagttgtcacaaagtggttgtacaaatatcatttct 37352049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 43444672 - 43444636
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  43444672 aaagttgtcataaagtggttgtacaaatatcatttct 43444636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 1523306 - 1523364
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| ||||||  || ||||||||||||||||||||||||||||||||||||||||||    
T  1523306 tatgacagagatagttatttcaaaagttatcaaaaagtggttgtacaaatatcatttct 1523364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 40434048 - 40434009
Alignment:
Q  201 tttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40434048 tttcaaaagttatcaaaaagtggttgtacaaatatcattt 40434009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 45333395 - 45333357
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45333395 caaaagttatcaaaaagtggttgtacaaatatcatttct 45333357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 1922437 - 1922495
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | ||||  ||||| ||||||||||||| |||||||||||||||||||    
T  1922437 tatgagagagagggttgtcacaaaaattatcaaaaagtgattgtacaaatatcatttct 1922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 32821693 - 32821636
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||  ||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  32821693 tatgagagagaaaattgttt-aaaagttgtcacaaagtggttgtacaaatatcatttct 32821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 35883619 - 35883677
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| ||| |||||||||||||| ||||||| |  |||||||||||||||||||    
T  35883619 tatgagagatatggttgtttcaaaagttgtcaaaaaataattgtacaaatatcatttct 35883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 40809555 - 40809498
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||| |||||||||||||| |||| ||||  |||||||||||||||||||    
T  40809555 tatgagagagatggttgtttcaaaagttgtcaataagt-attgtacaaatatcatttct 40809498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 2362393 - 2362357
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2362393 aaagttatcaaaaagtgattgtacaaatatcatttct 2362357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 45272183 - 45272219
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||||||    
T  45272183 aaagttgtcaaaaagtggttgtacaaatatcatttct 45272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 51571452 - 51571416
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||||||||||||    
T  51571452 aaagttgtcaaaaagtggttgtacaaatatcatttct 51571416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 49425778 - 49425739
Alignment:
Q  203 tcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  49425778 tcaaaagttgtcacaaagtggttgtacaaatatcatttct 49425739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 4213131 - 4213073
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||||||||||| ||||||| ||||||||||||||    
T  4213131 tatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 4213073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 27352669 - 27352631
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  27352669 caaaagttatcacaaaatggttgtacaaatatcatttct 27352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 27742676 - 27742618
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||| ||||||||||||||| ||||||||||||||    
T  27742676 tatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 27742618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 29706715 - 29706773
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | || |  |||||||||||| ||| ||||||||||||||||||||||    
T  29706715 tatgagagagaaggttataacaaaagttatcataaaatggttgtacaaatatcatttct 29706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 41619102 - 41619060
Alignment:
Q  197 attgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    ||||| ||||||||||||||||| | |||||||||||||||||    
T  41619102 attgtctcaaaagttatcaaaaaatagttgtacaaatatcatt 41619060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 42843376 - 42843414
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  42843376 caaaagttatcaaaaaattgttgtacaaatatcatttct 42843414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 47642619 - 47642677
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||||||||||| ||||||| ||||||||||||||    
T  47642619 tatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 47642677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 48858882 - 48858824
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||| ||||||||||||||| ||||||||||||||    
T  48858882 tatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 48858824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 48872437 - 48872380
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| | |||| | ||||||| ||| ||||||||||||||||||||||||||    
T  48872437 tatgagagagaaggttgtct-aaaagttgtcataaagtggttgtacaaatatcatttct 48872380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 366695 - 366658
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  366695 aaaagttatcagaaagtggttgtataaatatcatttct 366658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 23554789 - 23554752
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  23554789 aaaaattatcaaaaaatggttgtacaaatatcatttct 23554752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 45740577 - 45740614
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  45740577 aaaagttgtcacaaagtggttgtacaaatatcatttct 45740614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 50226912 - 50226949
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  50226912 aaaagttgtcacaaagtggttgtacaaatatcatttct 50226949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 14983821 - 14983785
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| | ||||||||||||||||||||||||||||    
T  14983821 aaagttgttaaaaagtggttgtacaaatatcatttct 14983785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 18639736 - 18639772
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||||||| | ||||||||||||||||||    
T  18639736 caaaagttatcaaaaaatcgttgtacaaatatcattt 18639772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 29264052 - 29264016
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  29264052 aaagttgtcataaagtggttgtacaaatatcatttct 29264016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 29489393 - 29489429
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  29489393 aaagttatcacaaaatggttgtacaaatatcatttct 29489429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 33675937 - 33675901
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  33675937 aaagttgtcaaaaagtggttgtacaaatgtcatttct 33675901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 33694227 - 33694271
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||| | |||||||| |||||||||||||||||||    
T  33694227 ttgttttaaaagttgttaaaaagtgattgtacaaatatcatttct 33694271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 35335530 - 35335562
Alignment:
Q  210 ttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||||| ||||||    
T  35335530 ttatcaaaaagtggttgtacaaatatgatttct 35335562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 37843466 - 37843502
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  37843466 aaagttgtcaaaaagtagttgtacaaatatcatttct 37843502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 48261178 - 48261142
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  48261178 caaaagttgtcaaaaagtggttgtacgaatatcattt 48261142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 48872051 - 48872087
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  48872051 aaagttgtcaaaaaatggttgtacaaatatcatttct 48872087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 49453528 - 49453492
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  49453528 aaagttgtcacaaagtggttgtacaaatatcatttct 49453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 51231318 - 51231374
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||   ||||  |||||||| | ||||||||||||||||||||||||||    
T  51231318 tatgagagagagagttgtgccaaaagttgttaaaaagtggttgtacaaatatcattt 51231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 793 - 848
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    ||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||    
T  793 tatgagagagatggttgtttcaaaagttgtcaaaaaatgattgtacaaatatcatt 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 13093671 - 13093629
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  13093671 ttgtttcaaaagttgtcaaaaagtggttgtacaaatatcattt 13093629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 20029320 - 20029264
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcattt 240  Q
    ||||||||||| | |||||||||||||| | |||||||||||||| |||||||||||    
T  20029320 tatgagagagaaggttgtttcaaaagttgttaaaaagtggttgtataaatatcattt 20029264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 31883330 - 31883374
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  31883330 ttgttacaaaagttgtcaaaaagtggttgtacaaatatcatttct 31883374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 31204822 - 31204880
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   || ||||||||||||||||||| |||||||| |||||||||||||    
T  31204822 tatgagagagagagttatttcaaaagttatcaaaaaatggttgtagaaatatcatttct 31204880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 38655 - 38598
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttc 241  Q
    ||||||||||| | ||||||| |||||| ||||||  |||||||||||||||||||||    
T  38655 tatgagagagagggttgtttccaaagttgtcaaaatttggttgtacaaatatcatttc 38598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 31517202 - 31517239
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  31517202 aaaagttgtcaaaaagtggttgtacaaatatcatttct 31517239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 32253813 - 32253781
Alignment:
Q  210 ttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||||||||||||||    
T  32253813 ttatcaaaaagtggttgtacaaatatcatttct 32253781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 10840777 - 10840722
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatt 239  Q
    ||||||||||| ||||||| |||||||| ||||||| |  ||||||||||||||||    
T  10840777 tatgagagagaggattgttccaaaagttgtcaaaaaataattgtacaaatatcatt 10840722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 17551391 - 17551449
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  17551391 tatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttct 17551449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 33712379 - 33712321
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||| ||||||||||||||| ||||||||||||||    
T  33712379 tatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttct 33712321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 2241840 - 2241877
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  2241840 aaaagttgtcaaaaagtggttgtataaatatcatttct 2241877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 6435074 - 6435037
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  6435074 aaaagttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 8173345 - 8173382
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  8173345 aaaagttatcacaaagtggttgcacaaatatcatttct 8173382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 29383595 - 29383558
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  29383595 aaaagttgtcagaaagtggttgtacaaatatcatttct 29383558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 32457285 - 32457322
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  32457285 aaaagttgtcacaaagtggttgtacaaatatcatttct 32457322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 1196095 - 1196059
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| |||||||||| |||||||||||||||||||    
T  1196095 aaagttgtcaaaaagtgattgtacaaatatcatttct 1196059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 1897734 - 1897698
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  1897734 aaagttgtcataaagtggttgtacaaatatcatttct 1897698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 6256487 - 6256436
Alignment:
Q  190 agagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||||||||||| || ||||||| |  |||||||||||||||||||    
T  6256487 agagatgattgtttcaaaa-ttgtcaaaaaataattgtacaaatatcatttct 6256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 28339 - 28397
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||   ||||  |||||||||||||||||||||||| ||||||||||||||    
T  28339 tatgagagagaaagttgtcacaaaagttatcaaaaagtggttgttcaaatatcatttct 28397  T

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Target: scaffold0514 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 1858 - 1915
Alignment:
Q  184 tatgagagagatgattgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||||||  ||||||||||  |||| ||||||||||||||||||||||    
T  1858 tatgagagagaagattgta-caaaagttatacaaaaatggttgtacaaatatcatttct 1915  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 18634 - 18596
Alignment:
Q  204 caaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  18634 caaaagttatcacaaattggttgtacaaatatcatttct 18596  T

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Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 219697 - 219734
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  219697 aaaagttgtcacaaagtggttgtacaaatatcatttct 219734  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 4353 - 4316
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  4353 aaaagttatcataaaatggttgtacaaatatcatttct 4316  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 15567 - 15604
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  15567 aaaagttgtcacaaagtggttgtacaaatatcatttct 15604  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 113663 - 113626
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  113663 aaaagttgtcacaaagtggttgtacaaatatcatttct 113626  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 88846 - 88809
Alignment:
Q  205 aaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  88846 aaaagttatcacaaattggttgtacaaatatcatttct 88809  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 337159 - 337119
Alignment:
Q  202 ttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  337159 ttcaaaagttgtcagaaaatggttgtacaaatatcatttct 337119  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 29795 - 29831
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| |||||||||||||||| |||||||||||||    
T  29795 aaagttgtcaaaaagtggttgtataaatatcatttct 29831  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 15857 - 15901
Alignment:
Q  198 ttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||||||||||||||||||| |  |||||||||||| ||||||    
T  15857 ttgtttcaaaagttatcaaaaaattattgtacaaatattatttct 15901  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 31623 - 31659
Alignment:
Q  206 aaagttatcaaaaagtggttgtacaaatatcatttct 242  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  31623 aaagttgtcaaaaaatggttgtacaaatatcatttct 31659  T

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