View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5585_low_10 (Length: 503)
Name: NF5585_low_10
Description: NF5585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5585_low_10 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 216 - 491
Target Start/End: Original strand, 4654409 - 4654684
Alignment:
| Q |
216 |
atctgaggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagaga |
315 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4654409 |
atctaaggtagtagtgtctgttagggagccacaatcgatagctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagaga |
4654508 |
T |
|
| Q |
316 |
gatagtatgctcatttttgtgtaaattgttttgtttatggagtttgccatatctgtgtgagaagagtgtgaagaaaatagattaatatgaatgatacgta |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
| T |
4654509 |
gatagtatgctcatttttgtgtaaatgtttttgtttatggagtttgccatatctgtgtgagaagagtgtgaagaaaatagatcaatttgaatggtacgta |
4654608 |
T |
|
| Q |
416 |
gaagttgctttatttattattatcttatacattgagtaggaagggaaatttccataaaacagcacttgagactgat |
491 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4654609 |
gaagttgctttatttattattatcttatacattgagtaggaagggaaatttccataaaacagcacttgagactgat |
4654684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 4653624 - 4653819
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4653624 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcgatgtaatttggaattgtattgtttttat |
4653723 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaacaaaccag |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4653724 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggataatcgttatcccaattacgaaacaaaccag |
4653819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 216 - 491
Target Start/End: Original strand, 4637767 - 4638051
Alignment:
| Q |
216 |
atctgaggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagaga |
315 |
Q |
| |
|
|||| |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| | |||||||||||| |
|
|
| T |
4637767 |
atctaaggcagtattgtcggttaaggagccacaattgatggctaaattgtaatcagggttgtatgagttagcaactaaagggaaaagtagcaaaaagagg |
4637866 |
T |
|
| Q |
316 |
gatagtatgctcatttttgtgtaaattgttttgtttatggagtttgccatatctgtgtgagaagagtgtgaagaaaatagattaatatgaatgatacgta |
415 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||| |||||| |||||| |
|
|
| T |
4637867 |
gatagtatgctgatttttgtgtaaatgtttttgtttatggagtttgccatagctgtgtgagaagagagtgaagaagatacattaatttgaatggtacgta |
4637966 |
T |
|
| Q |
416 |
gaagttgc-tttatttattattat---ctt--atacattga---gtaggaagggaaatttccataaaacagcacttgagactgat |
491 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||||||| ||||||| ||||||| |||||||||| ||||||||| |||| |
|
|
| T |
4637967 |
gaagttgcatttatttattattattagattagatacattgagaggtaggaaaggaaattcccataaaacaacacttgagagtgat |
4638051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 491
Target Start/End: Original strand, 4644605 - 4644889
Alignment:
| Q |
216 |
atctgaggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagaga |
315 |
Q |
| |
|
|||| |||||||||||| ||| |||||||||| | ||||||| ||||||| || ||||||||| ||| | ||||||||||| |||||||| |||| |
|
|
| T |
4644605 |
atctaaggcagtagtgttcgttgaggagccacaactaatggctatattgtaaattggattgtatgaggtagctagtagagggaacagtagcaaaatgaga |
4644704 |
T |
|
| Q |
316 |
gatagtatgctcatttttgtgtaaattgttttgtttatggagtttgccatatctgtgtgagaagagtgtgaagaaaatagattaatatgaatgatacgta |
415 |
Q |
| |
|
|| |||||||| |||||||||||| || |||||||||||| |||||||||| ||||||||||||| |||||||| ||| |||||| |||||| |||||| |
|
|
| T |
4644705 |
gaaagtatgctgatttttgtgtaattttttttgtttatggtgtttgccatagttgtgtgagaagagagtgaagaagatacattaatttgaatggtacgta |
4644804 |
T |
|
| Q |
416 |
gaagttgc-tttatttattatt-----atcttatacattga---gtaggaagggaaatttccataaaacagcacttgagactgat |
491 |
Q |
| |
|
|||||||| ||||||||||||| || | ||||||| | |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4644805 |
gaagttgcatttatttattattattagatttgatacatttagaggtaggaagggaaatttccataaaacaacacttgagactgat |
4644889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 4631031 - 4631220
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||||||||||| ||| ||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||| ||||||||| || |
|
|
| T |
4631031 |
caagttacattgtaatcctttgttgcatccattccataacttctcgcagttaagtaaacagcttctggtgcagtgtaatttgaaatggtattgtttaaat |
4631130 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
|||| ||||||| | |||||| |||||||||||| |||||||||| |||||| ||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
4631131 |
agtttagatgatgtccaaaataacttgatacactaagtggatattctttctccaagtaacgaggaaaatcattgtcccaattgcgaaaca |
4631220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 4663095 - 4663284
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||| ||||||||||| |||| | |||||||| |||| ||||||| |||||||| |||||||||| ||||||||||||| ||||||||| || |
|
|
| T |
4663095 |
caagttacattataatcctctgtcacatactttccataatttcttgcagttaagtatacagtttctggtgcagtgtaatttggaatggtattgtttaaat |
4663194 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
|||| ||||||| | |||||||||||||||||||| ||||||||| | |||| |||||||||||| |||| | ||||||| |||||||| |
|
|
| T |
4663195 |
agtttagatgatctccaaaatcacttgatacactttgtggatattctatctccaagtaacgaggagaatcattttcccaataacgaaaca |
4663284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 4846006 - 4845814
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||| ||||||||||| |||| | ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||| || |
|
|
| T |
4846006 |
caagttacattataatcctctgtcacatactttccataacttcttgcagttaagtatacagcttctggtgcagtgtaatttggaatagtattgtttaaat |
4845907 |
T |
|
| Q |
101 |
agttgagatgat---ttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
|||| ||||||| || || || |||||||||||| |||||||||| |||||| ||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
4845906 |
agtttagatgatcacttccataaaaacttgatacactaagtggatattctttctccaagtaacgaggaaaatcattgtcccaattgcgaaaca |
4845814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 4864026 - 4864221
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||| | ||| |||||||| ||||||| ||| ||| ||||||||||| |||||||| |||| || ||||||| || |
|
|
| T |
4864026 |
caagttacattgtactcctctgtggcatactgtccgtaacttcttgcagttaagtacacaacttctggtgcagtgtaattttgaatggtgttgttttcat |
4864125 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaacaaaccag |
196 |
Q |
| |
|
|||| ||||||| | |||||||||||||| ||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||| |
|
|
| T |
4864126 |
agttaagatgatgtttaaaatcacttgatatgctttgtggatattgtttctccaagtaacgaggaaaatcattgtcccaattacgaaacataccag |
4864221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 4672831 - 4673002
Alignment:
| Q |
25 |
acattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcac |
124 |
Q |
| |
|
||||| |||||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| | |||||||||||| | | | |||| |
|
|
| T |
4672831 |
acatttattccataacttcttgcagttacgtaaacagcttctggtgcagtgtaatttggaatggtattgtttaaaaagttgagatgatgcatatactcac |
4672930 |
T |
|
| Q |
125 |
ttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaacaaaccag |
196 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| | ||||||| | |||||||||||||||| ||||| |
|
|
| T |
4672931 |
ttgatacactaagtggatattgtttctccaagtaaccatgaaaatcattgtcccaattacgaaacataccag |
4673002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4697181 - 4696986
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
|||||||||||| |||||||||| ||| || |||| |||||| ||||||| ||| ||||||||||||||| |||||||| |||| || ||||||| || |
|
|
| T |
4697181 |
caagttacattgaaatcctctgtctcatccaatccacgacttcttgcagttaagtacacagcttctggtgcagtgtaattttgaatggtgttgttttcat |
4697082 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaacaaaccag |
196 |
Q |
| |
|
|||| ||||||| | |||||||||||||| ||| |||||||||||||||| ||||||||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
4697081 |
agttaagatgatgtttaaaatcacttgatatgctttgtggatattgtttctccaagtaacgaggaaaatcattgtcccagttacgaaacataccag |
4696986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 216 - 366
Target Start/End: Complemental strand, 4711266 - 4711116
Alignment:
| Q |
216 |
atctgaggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagaga |
315 |
Q |
| |
|
|||| |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||| |
|
|
| T |
4711266 |
atctaaggcagtagtgtttgttgagaagccacaattgatggctaaattgtaatcagggttgtatgagttagcaactagagggaacaagagcaaatagaga |
4711167 |
T |
|
| Q |
316 |
gatagtatgctcatttttgtgtaaattgttttgtttatggagtttgccata |
366 |
Q |
| |
|
||||||| | | ||||| |||| || | ||| ||||||||||||||||||| |
|
|
| T |
4711166 |
gatagtagggtaattttagtgtgaaatttttcgtttatggagtttgccata |
4711116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 4712066 - 4711874
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||| ||||||||||| |||| ||||||||||||||| ||||| | ||||||||||||||||||| ||||||| ||||| ||||||||| || |
|
|
| T |
4712066 |
caagttacattataatcctctgtcacatccattccataacttcttgcagtaaagtatacagcttctggtgcagtgtaattgggaatggtattgtttaaat |
4711967 |
T |
|
| Q |
101 |
agttgagatgat---ttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
|||| |||||| || || || || ||||||||||| ||||||||| ||| || | |||| |||||||||| || |||||||||||||||| |
|
|
| T |
4711966 |
agtttggatgatcacttccataaacagttgatacactttgtggatattctttttccaggtaaagaggaaaatcactgtcccaattacgaaaca |
4711874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 390
Target Start/End: Original strand, 4673647 - 4673793
Alignment:
| Q |
244 |
ccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagagagatagtatgctcatttttgtgtaaattg |
343 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||| ||||| |||||||||||| ||||||| ||| | ||||| | | |||||||||||| || |
|
|
| T |
4673647 |
ccacaattgatggctaaattgtaaattggtttgtatgaggtagcaactagagggaacaagagcaaaatgagcggtagtagggtgatttttgtgtaatttt |
4673746 |
T |
|
| Q |
344 |
ttttgtttatggagtttgccatatctgtgtgagaagagtgtgaagaa |
390 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
4673747 |
ttttgtttatggagtttgccatagctgtgtgagaagagggtgaagaa |
4673793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 4783826 - 4783637
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4783826 |
caagttacattgtaatcctctgtctcatacattccataacttcttgcagttaagtaaacaccttctggtgcaatgtaatttggaatgacattgtttttat |
4783727 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
| | || | || | ||| |||||||||||||| ||| || | |||||| |||||||||||| |||| | |||||||||||||||| |
|
|
| T |
4783726 |
atgttaggttatgtgtaaagtcacttgatacactagatgggtactctttctccaagtaacgaggagaatcattgtcccaattacgaaaca |
4783637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 4816255 - 4816066
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4816255 |
caagttacattgtaatcctctgtctcatacattccataacttcttgcagttaagtaaacaccttctggtgcaatgtaatttggaatgacattgtttttat |
4816156 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
| | || | || | ||| |||||||||||||| ||| || | |||||| |||||||||||| |||| | |||||||||||||||| |
|
|
| T |
4816155 |
atgttaggttatgtgtaaagtcacttgatacactagatgggtactctttctccaagtaacgaggagaatcattgtcccaattacgaaaca |
4816066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 196
Target Start/End: Original strand, 4667048 - 4667240
Alignment:
| Q |
7 |
acattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttga |
106 |
Q |
| |
|
||||| |||| |||| || ||| ||||||||||||||| ||||||| ||| ||| ||||||||||| ||||||||||||| ||||| | | |||||| |
|
|
| T |
4667048 |
acattataattctctttggcatccattccataacttcttgcagttaagtacacaacttctggtgcagtgtaatttggaatagtattttgtaaatagtttg |
4667147 |
T |
|
| Q |
107 |
gatgatt---tacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaacaaaccag |
196 |
Q |
| |
|
|||||| | |||||| |||||||| ||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||| |
|
|
| T |
4667148 |
gatgatcaggtccaaaataacttgatatgctttgtggatattgtttctccaagtaacgaggaaaatcattgtcccaattacgaaacataccag |
4667240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 38 - 190
Target Start/End: Original strand, 4643848 - 4644000
Alignment:
| Q |
38 |
aacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttatagttgagatgatttacaaaatcacttgatacacttag |
137 |
Q |
| |
|
||||||| ||||||| || ||||||||||||||| ||||||||||||| | ||| ||| |||||| ||||||| | || ||||| ||||||| ||||| |
|
|
| T |
4643848 |
aacttcttgcagttaaataaacagcttctggtgcagtgtaatttggaatggcattttttaaatagtttagatgatgttcataatcatttgatacgcttag |
4643947 |
T |
|
| Q |
138 |
tggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| | |||||||||||||||| |
|
|
| T |
4643948 |
cggatattgtttctccaagtaacgaggataatcattgtcccaattacgaaaca |
4644000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 366
Target Start/End: Complemental strand, 4696353 - 4696213
Alignment:
| Q |
226 |
gtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagagagatagtatgc |
325 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||| ||||||||| | | |
|
|
| T |
4696353 |
gtagtgtctgatgaggagccacaattgatggctaaattgtaaatagggtcgtatgaggtagcaactagagggaacaatagcaaaatgagagatagcagga |
4696254 |
T |
|
| Q |
326 |
tcatttttgtgtaaattgttttgtttatggagtttgccata |
366 |
Q |
| |
|
| ||||| |||| || | |||||||| |||||||||||||| |
|
|
| T |
4696253 |
tgattttagtgtgaaattttttgtttctggagtttgccata |
4696213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 4663637 - 4663727
Alignment:
| Q |
244 |
ccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagagagatagtatgctcatttttg |
334 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
4663637 |
ccacaactgatggctaaattgtaaattgggttgtatgaggtagcaattagagggaacaatagcaaaatgagagatagtatgctgatttttg |
4663727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 244 - 366
Target Start/End: Complemental strand, 4845166 - 4845044
Alignment:
| Q |
244 |
ccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatagcaaaaagagagatagtatgctcatttttgtgtaaattg |
343 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | || |||||||||||| | |||| ||| |||||||| | | ||||| |||| || | |
|
|
| T |
4845166 |
ccacaattgatggctaaattgtaatcagggttgtatgagttaataactagagggaacaaaaccaaatagatagatagtagggtgattttagtgtgaaatt |
4845067 |
T |
|
| Q |
344 |
ttttgtttatggagtttgccata |
366 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
4845066 |
ttttgtttatggagtttggcata |
4845044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 4636961 - 4637130
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||| ||||||| ||| ||| |||||| |||||||| ||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4636961 |
caagttacattataatcctttgtctcatacattccgtaacttcttgcagttaagtacacaacttctggtgcaatgtaatttggaatgacattgtttttat |
4637060 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatc |
170 |
Q |
| |
|
| | || | || | ||| |||||||||||||| ||| || | |||||| |||||| |||||||||| |
|
|
| T |
4637061 |
atgttaggttatgtgtaaagtcacttgatacactagatgggtactctttctccaagtaaagaggaaaatc |
4637130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 4783009 - 4782925
Alignment:
| Q |
221 |
aggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatag |
305 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| || ||||| |
|
|
| T |
4783009 |
aggcagtagtgtttgttgaggagccacaactgatggctaaactgtaatcagggttgtatgaaatagcaattagaggaaataatag |
4782925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 305
Target Start/End: Complemental strand, 4815438 - 4815354
Alignment:
| Q |
221 |
aggcagtagtgtctgttagggagccacaattgatggctaaattgtaatcagggttgtatgagtaagcaattagagggaacaatag |
305 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| || ||||| |
|
|
| T |
4815438 |
aggcagtagtgtttgttgaggagccacaactgatggctaaactgtaatcagggttgtatgaactagcaattagaggaaataatag |
4815354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 4864926 - 4865015
Alignment:
| Q |
301 |
aatagcaaaaagagagatagtatgctcatttttgtgtaaattgttttgtttatggagtttgccatatctgtgtgagaagagtgtgaagaa |
390 |
Q |
| |
|
||||| |||| ||||||||||| | | ||||| ||||||| | | |||||||| |||||||||||| ||||||||||||| |||||||| |
|
|
| T |
4864926 |
aataggaaaaggagagatagtagggtgattttagtgtaaagtttcttgtttatcgagtttgccatagttgtgtgagaagagggtgaagaa |
4865015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 491
Target Start/End: Original strand, 4673828 - 4673913
Alignment:
| Q |
410 |
tacgtagaagttgc-tttatttattattatcttatacattgag---taggaagggaaatttccataaaacagcacttgagactgat |
491 |
Q |
| |
|
|||||||||||||| |||| |||||||||| ||||||||||| |||||||||| |||| |||||| | |||||||||||||| |
|
|
| T |
4673828 |
tacgtagaagttgcctttaattattattattatatacattgagaggtaggaagggagatttttataaaaaaacacttgagactgat |
4673913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 18925733 - 18925544
Alignment:
| Q |
1 |
caagttacattgtaatcctctgtgacattcattccataacttctcgcagttaggtatacagcttctggtgcaatgtaatttggaattgtattgtttttat |
100 |
Q |
| |
|
||||||||||| ||||||| ||| ||| ||||||||||||||| ||||||| ||||||| |||||||||| |||| |||||||| ||||||||| ||| |
|
|
| T |
18925733 |
caagttacattataatcctttgtcgcatccattccataacttcttgcagttaagtatacaacttctggtgccgtgtagtttggaatggtattgtttatat |
18925634 |
T |
|
| Q |
101 |
agttgagatgatttacaaaatcacttgatacacttagtggatattgtttctctaagtaacgaggaaaatcgctatcccaattacgaaaca |
190 |
Q |
| |
|
||||||||| || | ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
18925633 |
agttgagattatgtgtaaaatcatttgatacacttagtggatattgtttctccaagtaacgaggaaaatcgttgtcccaataacgaaaca |
18925544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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